We use a subjective scale and leave the reader to translate the lab reports appropriately. If the bacteria are identified as bad/pathogenic and you are low, then do not enter them.
Bacteria Reported Level Also Known as Comment
[Clostridium] symbiosum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacteroides symbiosus" Stevens 1956| [Clostridium] symbiosum| ATCC 14940| Bacteroides symbiosus| Clostridium symbiosum| Clostridium symbiosum (Stevens 1956) Kaneuchi et al. 1976| DSM 934| JCM 1297
[Ruminococcus] gnavus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| [Ruminococcus] gnavus| ATCC 29149| Ruminococcus gnavus| Ruminococcus gnavus Moore et al. 1976| VPI C7-9
Acinetobacter [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Acinetobacter| Acinetobacter Brisou and Prevot 1954
Actinomyces [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Actinocladothrix" Affanassieff and Schulz 1889| "Discomyces" Rivolta 1878| Actinocladothrix| Actinomyces| Actinomyces Harz 1877 (Approved Lists 1980) emend. Nouioui et al. 2018| Discomyces
Pathogen
Agathobacter rectalis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacteroides rectalis" Hauduroy et al. 1937| "Pseudobacterium rectale" (Hauduroy et al. 1937) Krasil'nikov 1949| 'Roseburia rectale'| [Eubacterium] rectale| Agathobacter rectalis| Agathobacter rectalis (Hauduroy et al. 1937) Rosero et al. 2016| ATCC 33656| Bacteroides rectalis| CIP 105953| DSM 17629| Eubacterium rectale| Eubacterium rectale (Hauduroy et al. 1937) Prevot 1938| NCIMB 14373| not ATCC 25578| not VPI 0989| Pseudobacterium rectale| Roseburia rectale| strain A1-86| VPI 0990
Akkermansia [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Akkermansia| Akkermansia Derrien et al. 2004
Akkermansia muciniphila [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Akkermansia muciniphila| Akkermansia muciniphila Derrien et al. 2004 emend. Hahnke et al. 2016| Akkermansia sp. YL44| ATCC BAA-835| CIP 107961| strain Muc
Alistipes [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Alistipes| Alistipes Rautio et al. 2003
Alloprevotella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Alloprevotella| Alloprevotella Downes et al. 2013
Anaerostipes [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Anaerostipes| Anaerostipes Schwiertz et al. 2002 emend. Eeckhaut et al. 2010
Atopobium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Atopobium| Atopobium Collins and Wallbanks 1993 emend. Cools et al. 2014
Bacillota [phylum]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bacillaeota| Bacillaeota Oren et al. 2015| Bacillota| Bacillus/Clostridium group| clostridial firmicutes| Clostridium group firmicutes| Firmacutes| Firmicutes| Firmicutes corrig. Gibbons and Murray 1978| Low G+C firmicutes| low G+C Gram-positive bacteria| low GC Gram+
Bacillus subtilis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Vibrio subtilis" Ehrenberg 1835| Arthrobacter sp. CHR2P1B1-M| ATCC 6051| ATCC 6051-U| Bacillus mesentericus| Bacillus natto| Bacillus sp. 10405| Bacillus sp. 15:2| Bacillus sp. AECSB01| Bacillus sp. AECSB04| Bacillus sp. AECSB05| Bacillus sp. AECSB06| Bacillus sp. AECSB07| Bacillus sp. AECSB08| Bacillus sp. AECSB12| Bacillus sp. AECSB13| Bacillus sp. AECSB14| Bacillus sp. BS4(2013)| Bacillus sp. BS9(2013)| Bacillus sp. BV3| Bacillus sp. BV5| Bacillus sp. HE08| Bacillus sp. JKR21| Bacillus sp. LB002| Bacillus sp. LKM-BL| Bacillus sp. PW16b| Bacillus sp. PW19| Bacillus sp. RSP-GLU| Bacillus sp. S2 BC-1| Bacillus sp. SWI06| Bacillus sp. UMX-03| Bacillus subtilis| Bacillus subtilis (Ehrenberg 1835) Cohn 1872| Bacillus subtilis/Bacillus globigii| Bacillus uniflagellatus| BCRC 10255| Brevibacillus sp. BHR3P2B5-M| CCM 2216| CCRC 10255| CCRC:10255| CCUG 163 B| CFBP 4228| CIP 52.65| DSM 10| IAM 12118| IFO 13719| IFO 16412| IMET 10758| JCM 1465| LMG 7135| LMG:7135| NBRC 13719| NBRC 16412| NCAIM B.01095| NCCB 32009| NCCB 53016| NCCB 70064| NCDO 1769| NCIB 3610| NCIB:3610| NCIMB 3610| NCTC 3610| NRRL B-4219| NRRL NRS-1315| NRRL NRS-744| PNCM 1514| strain 168| Vibrio subtilis| VKM B-501
Bacteroidales [order]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bacteroidales| Bacteroidales Krieg 2012 emend. Pikuta et al. 2017
Bacteroides [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Ristella" Prevot 1938| Bacteroides| Bacteroides Castellani and Chalmers 1919 (Approved Lists 1980) emend. Shah and Collins 1989| Capsularis| Capsularis Prevot 1938 (Approved Lists 1980)| Ristella
Bacteroides caccae [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 43185| Bacteroides caccae| Bacteroides caccae Johnson et al. 1986 emend. Hahnke et al. 2016| CCUG 38735| CIP 104201| DSM 19024| JCM 9498| NCTC 13051| VPI 3452A
Bacteroidia [class]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bacteroidetes| Bacteroidia| Bacteroidia Krieg 2012
Bacteroidota [phylum]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bacteroidaeota| Bacteroidaeota Oren et al. 2015| Bacteroides-Cytophaga-Flexibacter group| Bacteroidetes| Bacteroidetes Krieg et al. 2012| Bacteroidota| BCF group| CFB group| CFB group bacteria| Cytophaga-Flexibacter-Bacteroides phylum
Over 70%ile, prone to being fat
Barnesiella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Barnesiella| Barnesiella Sakamoto et al. 2007 emend. Morotomi et al. 2008
Bifidobacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bifidibacterium" Prevot 1938| "Tissieria" Pribram 1929| Bifidibacterium| Bifidobacterium| Bifidobacterium Orla-Jensen 1924| Tissieria
Bifidobacterium adolescentis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| AS 1.2190| ATCC 15703| BCRC 14606| Bifidobacterium adolescentis| Bifidobacterium adolescentis Reuter 1963| Bifidobacterium stercoris| Bifidobacterium stercoris Kim et al. 2010| CCRC 14606| CCRC:14606| CCUG 17359| CCUG 18363| CIP 64.59| DSM 20083| DSM 24849 [[Bifidobacterium stercoris]]| JCM 1275| JCM 15918 [[Bifidobacterium stercoris]]| KCTC 5756 [[Bifidobacterium stercoris]]| LMG 10502| LMG:10502| NCAIM B.01822| NCTC 11814| strain Eg1 [[Bifidobacterium stercoris]]
Bifidobacterium animalis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bifidobacterium longum subsp. animalis biotype a" Mitsuoka 1969| AS 1.2268| ATCC 25527| BCRC 14668| Bifidobacterium animalis| Bifidobacterium animalis (Mitsuoka 1969) Scardovi and Trovatelli 1974 emend. Masco et al. 2004| Bifidobacterium longum subsp. animalis biotype a| CCRC 14668| CCRC:14668| CCUG 24606| CCUG 33907| CIP 105419| DSM 20104| HAMBI 112| JCM 1190| KCTC 3125| LMG 10508| LMG:10508| NCFB 2242| NCIMB 702242| strain R101-8
Bifidobacterium animalis subsp. lactis [subspecies]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bifidobacterium animalis subsp. lactis| Bifidobacterium animalis subsp. lactis (Meile et al. 1997) Masco et al. 2004| Bifidobacterium lactis| Bifidobacterium lactis Meile et al. 1997| CCUG 37979| CIP 105265| DSM 10140| JCM 10602| LMG 18314| LMG:18314| strain UR1
Bifidobacterium bifidum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Actinobacterium bifidum" (Tissier 1900) Puntoni 1937| "Actinomyces bifidus" (Tissier 1900) Nannizzi 1934| "Actinomyces parabifidus" (Weiss and Rettger 1938) Pine and Georg 1965| "Bacillus bifidus communis" Tissier 1900| "Bacillus bifidus" Tissier 1900| "Bacterium bifidum" (Tissier 1900) Lehmann and Neumann 1927| "Bacteroides bifidus" (Tissier 1900) Castellani and Chalmers 1919| "Bifidibacterium bifidum" (Tissier 1900) Prevot 1938| "Cohnistreptothrix bifidus" (Tissier 1900) Negroni and Fischer 1944| "Lactobacillus bifidus type II" Weiss and Rettger 1938| "Lactobacillus parabifidus" Weiss and Rettger 1938| "Nocardia bifida" (Tissier 1900) Vuillemin 1931| "Tissieria bifida" (Tissier 1900) Pribram 1929| Actinobacterium bifidum| Actinomyces bifidus| Actinomyces parabifidus| AS 1.2212| ATCC 29521| Bacillus bifidus| Bacillus bifidus communis| Bacterium bifidum| Bacteroides bifidus| BCRC 14615| Bifidibacterium bifidum| Bifidobacterium bifidum| Bifidobacterium bifidum (Tissier 1900) Orla-Jensen 1924| CCRC 14615| CCRC:14615| CCUG 18364| CCUG 45217| CIP 56.7| Cohnistreptothrix bifidus| DSM 20456| HAMBI 1380| IFO 14252| JCM 1255| KCTC 3202| Lactobacillus bifidus type II| Lactobacillus parabifidus| LMG 11041| LMG 8810| LMG:11041| LMG:8810| NBRC 100015| NBRC 14252| NCFB 2715| NCIMB 702715| NCTC 13001| Nocardia bifida| strain Ti| Tissieria bifida
Bifidobacterium breve [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bifidobacterium parvulorum" Reuter 1963| AS 1.2213| ATCC 15700| BCRC 11846| Bifidobacterium breve| Bifidobacterium breve Reuter 1963| Bifidobacterium parvulorum| CCRC 11846| CCRC:11846| CCUG 18365| CCUG 30511 A| CIP 64.69| DSM 20213| HAMBI 558| JCM 1192| LMG 11042| LMG:11042| NCAIM B.01820| NCFB 2257| NCIMB 702257| NCTC 11815
Bifidobacterium catenulatum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| AS 1.2197| ATCC 27539| BCRC 14667| Bifidobacterium catenulatum| Bifidobacterium catenulatum Scardovi and Crociani 1974| CCRC 14667| CCRC:14667| CCUG 18366| CIP 104175| DSM 16992| DSM 20103| HAMBI 560| JCM 1194| LMG 11043| LMG:11043| NCFB 2246| NCIMB 702246
Bifidobacterium dentium [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Actinomyces eriksonii| AS 1.2188| ATCC 27534| BCRC 14662| Bifidobacterium dentium| Bifidobacterium dentium Scardovi and Crociani 1974| CCRC 14662| CCRC:14662| CCUG 18367| CIP 104176| DSM 20436| HAMBI 556| JCM 1195| LMG 10506| LMG 11045| LMG:10506| LMG:11045| NCFB 2243| NCIMB 702243| NCTC 11816
Bifidobacterium longum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| AS 1.2186| ATCC 15707| BCRC 11847| Bifidobacterium longum| Bifidobacterium longum Reuter 1963| Bifidobacterium sp. 12_1_47BFAA| CCRC 11847| CCRC:11847| CCUG 28903| CIP 64.62| DSM 20219| HAMBI 554| JCM 1217| KCTC 3128| LMG 10497| LMG 13197| LMG:10497| LMG:13197| NCAIM B.01819| NCFB 2259| NCIMB 702259| NCTC 11818
Bifidobacterium longum subsp. infantis [subspecies]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bifidobacterium lactentis" Reuter 1963| "Bifidobacterium liberorum" Reuter 1963| AS 1.1853| AS 1.2202| ATCC 15697| BCRC 14602| BCRC 15416| Bifidobacterium infantis| Bifidobacterium infantis Reuter 1963| Bifidobacterium lactentis| Bifidobacterium liberorum| Bifidobacterium longum bv. Infantis| Bifidobacterium longum infantis| Bifidobacterium longum subsp. infantis| Bifidobacterium longum subsp. infantis (Reuter 1963) Mattarelli et al. 2008| CCRC 14602| CCRC 15416| CCRC:14602| CCRC:15416| CCUG 30512 B| CIP 64.67| DSM 20088| HAMBI 1374| HAMBI 555| HAMBI 574| JCM 1222| LMG 8811| LMG:8811| NCAIM B.01821| NCFB 2205| NCIMB 702205| NCTC 11817
Blautia [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Blautia| Blautia Liu et al. 2008 emend. Durand et al. 2017
Blautia obeum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 29174| Blautia obeum| Blautia obeum (Moore et al. 1976) Lawson and Finegold 2015| DSM 25238| KCTC 15206| Ruminococcus obeum| Ruminococcus obeum Moore et al. 1976
Butyricicoccus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Butyricicoccus| Butyricicoccus Eeckhaut et al. 2008
Butyricimonas [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Butyricimonas| Butyricimonas Sakamoto et al. 2009 emend. Sakamoto et al. 2014
Butyrivibrio [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Butyrivibrio| Butyrivibrio Bryant and Small 1956
Campylobacter [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Campylobacter| Campylobacter Sebald and Veron 1963 (Approved Lists 1980) emend. Tanner et al. 1981| Campylobacter Sebald and Veron 1963 (Approved Lists 1980) emend. Vandamme et al. 1991| Campylobacter Sebald and Veron 1963 (Approved Lists 1980) emend. Vandamme et al. 2010
Pathogen
Campylobacter coli [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Vibrio coli" Doyle 1948| ATCC 33559| Campylobacter coli| Campylobacter coli (Doyle 1948) Veron and Chatelain 1973| Campylobacter hyoilei| Campylobacter hyoilei Alderton et al. 1995| Campylobacter sp. OH-18-18281-4B| Campylobacter sp. OH-18-7816| CCUG 11283| CCUG 14540| CCUG:33450 [[Campylobacter hyoilei]]| CIP 70.80| DSM 4689| JCM 2529| LMG 6440| LMG 9860| LMG:6440| LMG:9860| NCTC 11366| strain RMIT 32A [[Campylobacter hyoilei]]| Vibrio coli
Campylobacter jejuni [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Campylobacter fetus subsp. jejuni" Smibert 1974| "Vibrio hepaticus" Mathey and Rissberger 1964| "Vibrio jejuni" Jones et al. 1931| ATCC 33560| Campylobacter fetus subsp. jejuni| Campylobacter jejuni| Campylobacter jejuni (Jones et al. 1931) Veron and Chatelain 1973| Campylobacter sp. AG18-0001| Campylobacter sp. AG18-0002| Campylobacter sp. AG18-0003| Campylobacter sp. AG18-0027| Campylobacter sp. CFSAN080682| Campylobacter sp. OH-13-16058| Campylobacter sp. OH-13-16470-3| Campylobacter sp. OH-13-28726| Campylobacter sp. OH-18-10249| Campylobacter sp. OH-18-14936| Campylobacter sp. OH-18-15124| Campylobacter sp. OH-18-15133| Campylobacter sp. OH-18-15144| Campylobacter sp. OH-18-15321-1| Campylobacter sp. OH-18-15321-2| Campylobacter sp. OH-18-15321-3| Campylobacter sp. OH-18-15321-4| Campylobacter sp. OH-18-18281-4A| Campylobacter sp. OH-18-19951-2| Campylobacter sp. OH-18-8054| CCUG 11284| CIP 70.2| DSM 4688| LMG 8841| LMG:8841| NCTC 11351| Vibrio hepaticus| Vibrio jejuni
Gastroenteritis, Guillain-Barré syndrome
Campylobacter upsaliensis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 43954| Campylobacter upsaliensis| Campylobacter upsaliensis Sandstedt and Ursing 1991| catalase-negative or weak group of campylobacteria| CCUG 14913| CIP 103681| CNW group| DSM 5365| NCTC 11541
Catenibacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Catenibacterium| Catenibacterium Kageyama and Benno 2000
Cedecea [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Cedecea| Cedecea Grimont et al. 1981
Cetobacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Cetobacterium| Cetobacterium Foster et al. 1996 emend. Finegold et al. 2003
Citrobacter [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Citrobacter| Citrobacter Werkman and Gillen 1932| Levinea| Levinea Young et al. 1971
Pathogen
Clostridioides difficile [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus difficilis" Hall and O'Toole 1935| "Peptoclostridium difficile" Yutin and Galperin 2013| AS 1.2184| ATCC 9689| Bacillus difficilis| BCRC 10642| CCRC 10642| CCRC:10642| CCUG 4938| CIP 104282| Clostridioides difficile| Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016| Clostridium difficile| Clostridium difficile (Hall and O'Toole 1935) Prevot 1938 (Approved Lists 1980)| Clostridium difficle| Clostridium sp. HMSC19D05| DSM 1296| DSMZ 1296| JCM 1296| LMG 15861| LMG:15861| NCIMB 10666| NCTC 11209| Peptoclostridium difficile
Colitis
Clostridium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Anaerobacter| Anaerobacter Duda et al. 1996| Clostridium| Clostridium Prazmowski 1880 (Approved Lists 1980) emend. Lawson and Rainey 2016
Pathogen
Collinsella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Collinsella| Collinsella Kageyama et al. 1999 emend. Kageyama and Benno 2000
proinflammatory
Coprobacillus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Coprobacillus| Coprobacillus Kageyama and Benno 2000
Coprococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Coprococcus| Coprococcus Holdeman and Moore 1974
Cryptosporidium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
Dermabacter [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Dermabacter| Dermabacter Jones and Collins 1989| Dermatobacter
Desulfovibrio [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Sporovibrio" Starkey 1938| Desulfomonas| Desulfomonas Moore et al. 1976| Desulfovibrio| Desulfovibrio Kluyver and van Niel 1936 (Approved Lists 1980) emend. Loubinoux et al. 2002| Sporovibrio
Desulfovibrio piger [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 29098| Desulfomonas pigra| Desulfomonas pigra Moore et al. 1976| Desulfovibrio piger| Desulfovibrio piger (Moore et al. 1976) Loubinoux et al. 2002| DSM 749
Dialister invisus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| CCUG 47026| Dialister invisus| Dialister invisus Downes et al. 2003| DSM 15470| JCM 17566| strain E7.25
Dorea [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Dorea| Dorea Taras et al. 2002
Dysgonomonas [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Dysgonomonas| Dysgonomonas Hofstad et al. 2000
Edwardsiella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Edwardsiella
Edwardsiella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Asakusa group" Sakazaki and Murata 1962| "Bartholomew group" King and Adler 1964| Asakusa group| Bartholomew group| Edwardsiella| Edwardsiella Ewing and McWhorter 1965
Edwardsiella tarda [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
Eggerthella lenta [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacteroides lentus" Eggerth 1935| "Pseudobacterium lentum" Krasil'nikov 1949| ATCC 25559| Bacteroides lentus| CCUG 17323 A| CIP 106637| DSM 2243| Eggerthella lenta| Eggerthella lenta (Eggerth 1935) Kageyama et al. 1999| Eggerthella lenta (Eggerth 1935) Wade et al. 1999 emend. Maruo et al. 2008| Eubacterium lentum| Eubacterium lentum (Eggerth 1935) Prevot 1938 (Approved Lists 1980)| JCM 9979| NCAIM B.01418| NCTC 11813| Pseudobacterium lentum
Enterobacter [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Aerobacter" Hormaeche and Edwards 1958| "Cloaca" Castellani and Chalmers 1919| Cloaca| Enterobacter| Enterobacter Hormaeche and Edwards 1960 (Approved Lists 1980) emend. Brady et al. 2013
Urinary and respiratory infections
Enterobacterales [order]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Enterobacterales| Enterobacterales Adeolu et al. 2016| enterobacteria| Enterobacteriaceae and related endosymbionts| Enterobacteriaceae group| Enterobacteriales| gamma-3 proteobacteria
Enterobacteriaceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Enterobacteraceae| Enterobacteraceae (ex Lapage 1979) Lapage 1982| Enterobacteriaceae| Enterobacteriaceae (ex Rahn 1937) Ewing et al. 1980| Enterobacteriaceae Rahn 1937 (Approved Lists 1980) emend. Adeolu et al. 2016| gamma-3 proteobacteria
Enterococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Enterococcus" Thiercelin and Jouhaud 1903| Enterococcus| Enterococcus (ex Thiercelin and Jouhaud 1903) Schleifer and Kilpper-Balz 1984
Enterococcus gallinarum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 49573| CCUG 18658| CECT 970| CIP 103013| DSM 24841| Enterococcus gallinarum| Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984| JCM 8728| LMG 13129| LMG:13129| NBRC 100675| NCDO 2313| NCIMB 702313| NCTC 12359| strain F87/276| strain PB21| Streptococcus gallinarum| Streptococcus gallinarum Bridge and Sneath 1982
Escherichia [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Escherichia| Escherichia Castellani and Chalmers 1919
Escherichia coli [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus coli" Migula 1895| "Bacterium coli commune" Escherich 1885| "Bacterium coli" (Migula 1895) Lehmann and Neumann 1896| ATCC 11775| Bacillus coli| bacterium 10a| Bacterium coli| Bacterium coli commune| bacterium E3| CCUG 24| CCUG 29300| CIP 54.8| DSM 30083| E. coli| Enterococcus coli| Escherichia coli| Escherichia coli (Migula 1895) Castellani and Chalmers 1919| Escherichia sp. 3_2_53FAA| Escherichia sp. MAR| Escherichia/Shigella coli| JCM 1649| LMG 2092| LMG:2092| NBRC 102203| NCCB 54008| NCTC 9001
Diarrheal disease in children and travelers, Foodborne diarrhea outbreaks, hemorrhagic colitis, hemolytic-uremic syndrome
Eubacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Eubacterium| Eubacterium Prevot 1938 (Approved Lists 1980) emend. Cato et al. 1983
Faecalibacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Faecalibacterium| Faecalibacterium Duncan et al. 2002
Faecalibacterium prausnitzii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus mucosus anaerobius" Prausnitz 1922| "Bacteroides praussnitzii" (sic) Hauduroy et al. 1937| ATCC 27768| Bacillus mucosus anaerobius| Bacteroides praussnitzii| butyrate-producing bacterium A2-165| Faecalibacterium prausnitzii| Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002| Fusobacterium prausnitzii| Fusobacterium prausnitzii (Hauduroy et al. 1937) Moore and Holdeman 1970 (Approved Lists 1980)| NCIMB 13872
Fusobacteriia [class]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Fusobacteria| Fusobacteriia| Fusobacteriia Staley and Whitman 2012
Fusobacteriota [phylum]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Fusobacteraeota| Fusobacteraeota Oren et al. 2015| Fusobacteria| Fusobacteria Garrity and Holt 2001| Fusobacteriota
Fusobacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Fusibacterium| Fusobacterium| Fusobacterium Knorr 1922
Periodontal disease, Lemierre syndrome, skin ulcers
Haemophilus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Haemophilus| Haemophilus Winslow et al. 1917
Pathogen
Hafnia [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Hafnia| Hafnia Moller 1954
Helicobacter pylori [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 43504| ATCC 49396 [[Helicobacter nemestrinae Bronsdon et al. 1991]]| Campylobacter pylori| Campylobacter pylori corrig. Marshall et al. 1985 emend. Fox et al. 1988| Campylobacter pylori corrig. Marshall et al. 1985 emend. Fox et al. 1989| Campylobacter pylori Marshall et al. 1985 corrig. Marshall and Goodwin 1987| Campylobacter pylori subsp. pylori| Campylobacter pylori subsp. pylori Marshall et al. 1985| Campylobacter pyloridis| Campylobacter pyloridis Marshall et al.1985| CCUG 15815 B| CCUG 17874| CCUG 39500| CIP 103995| DSM 21031| DSM 4867| DSM 7492 [[Helicobacter nemestrinae Bronsdon et al. 1991]]| Helicobacter nemestrinae| Helicobacter nemestrinae Bronsdon et al. 1991| Helicobacter pylori| Helicobacter pylori (Marshall et al. 1985) Goodwin et al. 1989| JCM 12093| LMG 18041| LMG 19449| LMG:18041| LMG:19449| NCTC 11637| NCTC 12491 [[Helicobacter nemestrinae Bronsdon et al. 1991]]| strain Royal Perth Hospital 13487| strain T81213-NTB [[Helicobacter nemestrinae Bronsdon et al. 1991]]
Gastric ulcers
Heyndrickxia coagulans [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 7050| Bacillus coagulans| Bacillus coagulans Hammer 1915 (Approved Lists 1980) emend. De Clerck et al. 2004| Bacillus sp. NCIM 2323| BCRC 10606| CCM 2013| CCRC 10606| CCRC:10606| CCUG 7417| CFBP 4225| CIP 66.25| DSM 1| HAMBI 1931| IAM 1115| IFO 12583| IMET 10993| JCM 2257| Lactobacillus sp. T4| LMG 6326| LMG:6326| NBRC 12583| NCAIM B.01086| NCCB 48014| NCCB 77025| NCDO 1761| NCIMB 9365| NCTC 10334| NRIC 1005| NRRL NRS-609| VKM B-731
Holdemania [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Holdemania| Holdemania Willems et al. 1997
Hungatella hathewayi [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| CCUG 43506| Clostridium hathewayi| Clostridium hathewayi Steer et al. 2002| DSM 13479| Hungatella hathewayi| Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014| MTCC 10951| strain 1313
Klebsiella aerogenes [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Aerobacter aerogenes" Hormaeche and Edwards 1958| Aerobacter aerogenes| ATCC 13048| CCUG 1429| CIP 60.86| DSM 30053| Enterobacter aerogenes| Enterobacter aerogenes Hormaeche and Edwards 1960| HAMBI 101| HAMBI 1898| IFO 13534| JCM 1235| KCTC 2190| Klebsiella aerogenes| Klebsiella aerogenes (Hormaeche and Edwards 1960) Tindall et al. 2017| Klebsiella mobilis| Klebsiella mobilis Bascomb et al. 1971| LMG 2094| LMG:2094| NBRC 13534| NCAIM B.01467| NCTC 10006
Klebsiella pneumoniae [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886| "Bacterium pneumoniae crouposae" Zopf 1885| "Hyalococcus pneumoniae" Schroeter 1886| 'Klebsiella aerogenes' (Kruse) Taylor et al. 1956| ATCC 13883| Bacillus pneumoniae| Bacterium pneumoniae crouposae| CCUG 225| CIP 82.91| DSM 30104| HAMBI 450| Hyalococcus pneumoniae| IFO 14940| JCM 1662| Klebsiella pneumoniae| Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887| Klebsiella pneumoniae aerogenes| Klebsiella sp. 2N3| Klebsiella sp. C1(2016)| Klebsiella sp. M-AI-2| Klebsiella sp. PB12| Klebsiella sp. RCE-7| LMG 2095| LMG:2095| NBRC 14940| NCTC 9633
H00301 Klebsiella infection, Pneumonia
Lachnospiraceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Lachnospiraceae| Lachnospiraceae Rainey 2010
Lacticaseibacillus casei [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus a" von Freudenreich 1890| "Bacillus a" von Freudenreich 1891| "Bacillus casei a" von Freudenreich and Thoni 1904| "Bacterium casei a" Orla-Jensen 1916| "Caseobacterium vulgare" Orla-Jensen 1916| "Lactobacillus casei" Bergey et al. 1923| "Lactobacterium casei" (Orla-Jensen 1916) Krasil'nikov 1949| "Streptobacterium casei" Orla-Jensen 1919| ATCC 393| Bacillus a| Bacillus casei a| Bacterium casei a| BCRC 10697| Caseobacterium vulgare| CCRC 10697| CCRC:10697| CECT 475| CIP 103137| DSM 20011| IAM 12473| IFO 15883| JCM 1134| KCTC 3109| Lactobacillus casei| Lactobacillus casei (Orla-Jensen 1916) Hansen and Lessel 1971 (Approved Lists 1980) emend. Dicks et al. 1996| Lactobacillus casei subsp. casei| Lactobacillus sp. NCIM 2363| Lactobacillus sp. NCIM 2732| Lactobacillus sp. T2| Lactobacillus sp. T20| Lactobacterium casei| LMG 6904| LMG:6904| NBRC 15883| NCDO 161| NCIMB 11970| NRRL B-1922| strain Hucker03| strain Orla-Jensen 7| strain OrlandL-323| strain Tittsler303| Streptobacterium casei
Lacticaseibacillus paracasei [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 25302| CCUG 32212| CIP 103918| DSM 5622| IFO 15889| JCM 8130| Lactobacillus paracasei| Lactobacillus paracasei Collins et al. 1989| Lactobacillus sp. LBS3| Lactobacillus sp. O3| Lactobacillus sp. T16| Lactobacillus sp. T3| Lactobacillus sp. TD3| Lactobacillus sp. W-29B| Lactobacillus sp. X-3B| Lactobacillus sp. X24| LMG 13087| LMG:13087| NBRC 15889| NCDO 151| NCIMB 700151
Lacticaseibacillus rhamnosus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 7469| CCUG 21452| CIP A157| DSM 20021| IFO 3425| JCM 1136| Lactobacillus casei rhamnosus| Lactobacillus casei subsp. rhamnosus| Lactobacillus casei subsp. rhamnosus Hansen 1968 (Approved Lists 1980)| Lactobacillus rhamnosus| Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989| Lactobacillus sp. NCIM 2587| Lactobacillus sp. W6| Lactobacillus sp. X9| LMG 6400| LMG:6400| NBRC 3425| NCAIM B.01147| NCCB 46033| NCDO 243| NCIMB 6375| NCTC 12953| NRRL B-442| VKM B-574
Lactiplantibacillus plantarum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Lactobacillus arabinosus" Fred et al.| "Lactobacillus plantari" (sic) (Orla-Jensen 1919) Bergey et al. 1923 (Approved Lists 1980)| "Lactobacterium plantarum" (Orla-Jensen 1919) Krasil'nikov 1949| "Streptobacterium plantarum" Orla-Jensen 1919| ATCC 14917| ATCC BAA-171 [[Lactobacillus arizonensis]]| B-14768 [[Lactobacillus arizonensis]]| CCUG 30503| CCUG 45396 [[Lactobacillus arizonensis]]| CIP 103151| CIP 106786 [[Lactobacillus arizonensis]]| DSM 13273 [[Lactobacillus arizonensis]]| DSM 20174| IFO 15891| JCM 11125 [[Lactobacillus arizonensis]]| JCM 1149| Lactobacillus arabinosus| Lactobacillus arizonae| Lactobacillus arizonensis| Lactobacillus arizonensis Swezey et al. 2000| Lactobacillus plantari| Lactobacillus plantarum| Lactobacillus plantarum (Orla-Jensen 1919) Bergey et al. 1923| Lactobacillus sp. Lact08| Lactobacillus sp. Lact09| Lactobacillus sp. Lact14| Lactobacillus sp. M6DWS| Lactobacillus sp. S2| Lactobacillus sp. S8| Lactobacillus sp. Z12| Lactobacterium plantarum| LMG 6907| LMG:6907| NBRC 15891| NCIMB 11974| NRRL B-14768 [[Lactobacillus arizonensis]]| NRRL B-4496| Streptobacterium plantarum| Weissella sp. Lact07
Lactobacillaceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Lactobacillaceae| Lactobacillaceae Winslow et al. 1917
Lactobacillus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Lactobacillus| Lactobacillus Beijerinck 1901 (Approved Lists 1980) emend. Cai et al. 2012| Lactobacillus Beijerinck 1901 (Approved Lists 1980) emend. Haakensen et al. 2009| Paralactobacillus| Paralactobacillus Leisner et al. 2000
Pathogen
Lactobacillus delbrueckii subsp. bulgaricus [subspecies]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Thermobacterium bulgaricum" Orla-Jensen 1919| ATCC 11842| CCUG 41390| CIP 101027| DSM 20081| IFO 13953| JCM 1002| Lactobacillus bulgaricus| Lactobacillus bulgaricus (Orla-Jensen 1919) Rogosa and Hansen 1971 (Approved Lists 1980)| Lactobacillus delbrueckii (SUBSP. BULGARICUS)| Lactobacillus delbrueckii bulgaricus| Lactobacillus delbrueckii subsp. bulgaricus| Lactobacillus delbrueckii subsp. bulgaricus (Orla-Jensen 1919) Weiss et al. 1984| Lactobacillus sp. NCIM 2056| LMG 13551| LMG 6901| LMG:13551| LMG:6901| NBRC 13953| NCTC 12712| Thermobacterium bulgaricum| VKM B-1923
Lactococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| lactic streptococci| Lactococcus| Lactococcus Schleifer et al. 1986
Lancefieldella parvula [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Streptococcus parvulus" Weinberg et al. 1937| ATCC 33793| Atopobium parvulum| Atopobium parvulum (Weinberg et al. 1937) Collins and Wallbanks 1993| CCUG 32760| CIP 102970| DSM 20469| JCM 10300| Peptostreptococcus parvulus| Peptostreptococcus parvulus (Weinberg et al. 1937) Smith 1957 (Approved Lists 1980)| strain IPP 1246| Streptococcus parvulus| Streptococcus parvulus (Weinberg et al. 1937) Cato 1983| VPI 0546
Latilactobacillus sakei [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 15521| ATCC 31063 [[Lactobacillus bavaricus Stetter and Stetter 1980]]| CCUG 30501| CIP 103139| DSM 20017| DSM 20269 [[Lactobacillus bavaricus Stetter and Stetter 1980]]| IFO 15893| JCM 1129 [[Lactobacillus bavaricus Stetter and Stetter 1980]]| JCM 1157| Lactobacillus bavaricus| Lactobacillus bavaricus Stetter and Stetter 1980| Lactobacillus sake| Lactobacillus sakei| Lactobacillus sakei corrig. Katagiri et al. 1934 (Approved Lists 1980) emend. Klein et al. 1996| LMG 13558| LMG 9468| LMG 9844 [[Lactobacillus bavaricus Stetter and Stetter 1980]]| LMG:13558| LMG:9468| LMG:9844 [[Lactobacillus bavaricus Stetter and Stetter 1980]]| NBRC 15893
Leuconostoc [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Betacoccus" Orla-Jensen 1919| Betacoccus| Leuconostoc| Leuconostoc van Tieghem 1878
Levilactobacillus brevis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus casei g" von Freudenreich and Thoni 1904| "Bacillus g" von Freudenreich 1891| "Betabacterium breve" Orla-Jensen 1919| "Lactobacterium breve" (Orla-Jensen 1919) Krasil'nikov 1949| ATCC 14869| Bacillus casei g| Bacillus g| Bacillus sp. DM9218| Betabacterium breve| CCUG 30670| CIP 102806| DSM 20054| JCM 1059| Lactobacillus brevis| Lactobacillus brevis (Orla-Jensen 1919) Bergey et al. 1934| Lactobacillus sp. NCIM 2090| Lactobacillus sp. TD10| Lactobacillus sp. TD4| Lactobacterium breve| LMG 6906| LMG 7944| LMG:6906| LMG:7944| NRRL B-4527
Ligilactobacillus animalis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 35046| CCUG 33906| CIP 103152| DSM 20602| IFO 15882| JCM 5670| Lactobacillus animalis| Lactobacillus animalis Dent and Williams 1983| Lactobacillus sp. LL1| LMG 9843| LMG:9843| NBRC 15882| NCDO 2425| NCIMB 13278| NRRL B-14176| strain 1535
Ligilactobacillus murinus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 35020| CCUG 33904| CIP 104818| CNRZ 220| DSM 20452| IFO 14221| JCM 1717| Lactobacillus murinus| Lactobacillus murinus Hemme et al. 1982| LMG 14189| LMG:14189| NBRC 14221| strain 313
Ligilactobacillus ruminis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 27780| CCUG 39465| CIP 103153| DSM 20403| JCM 1152| Lactobacillus ruminis| Lactobacillus ruminis Sharpe et al. 1973| LMG 10756| LMG:10756| NBRC 102161| NRRL B-14853
Ligilactobacillus salivarius [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 11741| ATCC 11742| CCUG 31453| CCUG 39464| CIP 103140| CIP 103155| DSM 20554| DSM 20555| HAMBI 78| HAMBI 87| JCM 1150| JCM 1231| Lactobacillus salivarius| Lactobacillus salivarius Rogosa et al. 1953 (Approved Lists 1980) emend. Li et al. 2006| Lactobacillus salivarius subsp. salicinius| Lactobacillus salivarius subsp. salicinius Rogosa et al. 1953| Lactobacillus salivarius subsp. salivarius| Lactobacillus salivarius subsp. salivarius Rogosa et al. 1953| LMG 9476| LMG 9477| LMG:9476| LMG:9477| NBRC 102160| NRRL B-1949| NRRL B-1950
Limosilactobacillus fermentum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus casei d" von Freudenreich and Thoni 1904| "Bacillus d" von Freudenreich 1895| "Lactobacterium fermentum" (Beijerinck 1901) van Steenberge 1920| ATCC 14931| Bacillus casei d| Bacillus d| CCUG 30138| CECT 562 [[Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980)]]| CIP 102980| DSM 20055 [[Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980)]]| IFO 15885| JCM 1137 [[Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980)]]| JCM 12530 [[Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980)]]| Lactobacillus cellobiosus| Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980)| Lactobacillus fermentum| Lactobacillus fermentum Beijerinck 1901 (Approved Lists 1980) emend. Dellaglio et al. 2004| Lactobacillus sp. NCIM 2165| Lactobacterium fermentum| LMG 6902| LMG 9846 [[Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980)]]| LMG:6902| LMG:9846 [[Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980)]]| NBRC 15885| NCCB 46038| NCDO 1750| NCIMB 11840| NRRL B-1840 [[Lactobacillus cellobiosus Rogosa et al. 1953 (Approved Lists 1980)]]| NRRL B-4524
Limosilactobacillus reuteri [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 23272| CCUG 33624| CIP 101887| DSM 20016| IFO 15892| JCM 1112| Lactobacillus fermentum biotype II| Lactobacillus fermentum subsp. reuteri| Lactobacillus reuteri| Lactobacillus reuteri (plasmid pGT232)| Lactobacillus reuteri Kandler et al. 1982| Lactobacillus sp. I49| LMG 13557| LMG 9213| LMG:13557| LMG:9213| NBRC 15892| NRRL B-14171
Listeria [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Listerella" Pirie 1927 (nom. rej. Opin. 14)| Listerella| Listeria| Listeria Pirie 1940
Marvinbryantia [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bryantella| Bryantella Wolin et al. 2004| Marvinbryantia| Marvinbryantia Wolin et al. 2008
Megamonas [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Megamonas| Megamonas Shah and Collins 1983
Methanobrevibacter [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Methanobrevibacter| Methanobrevibacter Balch and Wolfe 1981
Methanobrevibacter smithii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 35061| DSM 861| Methanobrevibacter smithii| Methanobrevibacter smithii Balch and Wolfe 1981| OCM 144| strain PS
Micrococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Micrococcus| Micrococcus Cohn 1872 (Approved Lists 1980) emend. Wieser et al. 2002| Micrococcus Cohn 1872 emend. Stackebrandt et al. 1995
Mitsuokella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Mitsuokella| Mitsuokella Shah and Collins 1983
Mycoplana [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Mycoplana| Mycoplana Gray and Thornton 1928 (Approved Lists 1980) emend. Urakami et al. 1990
Nitrobacteraceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| alpha-2 proteobacteria| BANA domain| Bradyrhizobiaceae| Bradyrhizobiaceae Garrity et al. 2006| Bradyrhizobium group| Nitrobacteraceae| Nitrobacteraceae Buchanan 1917
Odoribacter [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Odoribacter| Odoribacter Hardham et al. 2008
Oscillospira [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Oscillospira| Oscillospira Chatton and Perard 1913
Paenibacillus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bacillus polymyxa group| Paenibacillus| Paenibacillus Ash et al. 1994 emend. Behrendt et al. 2010| Paenibacillus Ash et al. 1994 emend. Huang et al. 2017| Paenibacillus Ash et al. 1994 emend. Shida et al. 1997| rRNA group 3 bacilli
Parabacteroides [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Parabacteroides| Parabacteroides Sakamoto and Benno 2006
BMI, fat percent,blood pressure
Paraprevotella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Paraprevotella| Paraprevotella Morotomi et al. 2009
Pediococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Pediococcus| Pediococcus Balcke 1884 (sic)| Pediococcus Claussen 1903
Peptostreptococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Peptostreptococcus| Peptostreptococcus Kluyver and van Niel 1936 (Approved Lists 1980) emend. Ezaki et al. 1983| Peptostreptococcus Kluyver and van Niel 1936 (Approved Lists 1980) emend. Ezaki et al. 2001
Pathogen
Phocaeicola vulgatus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 8482| bacterium NLAE-zl-G202| Bacteroides vulgatus| Bacteroides vulgatus Eggerth and Gagnon 1933 (Approved Lists 1980) emend. Hahnke et al. 2016| BCRC 12903| CCRC 12903| CCRC:12903| CCUG 4940| CIP 103714| DSM 1447| IFO 14291| JCM 5826| LMG 17767| LMG 7956| LMG:17767| LMG:7956| NBRC 14291| NCTC 11154
Plesiomonas shigelloides [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Aeromonas shigelloides" (Bader 1954) Ewing et al. 1961| "Fergusonia shigelloides" (Bader 1954) Sebald and Vron 1963| "Pseudomonas shigelloides" Bader 1954| Aeromonas shigelloides| ATCC 14029| CCUG 410| CIP 63.5| DSM 8224| Fergusonia shigelloides| LMG 4242| LMG:4242| NCCB 80007| NCIMB 9242| NCTC 10360| Pleisomonas shigelloides| Plesiomonas shigelloides| Plesiomonas shigelloides corrig. (Bader 1954) Habs and Schubert 1962| Pseudomonas shigelloides
Gastroenteritis
Porphyromonas [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Oribaculum| Oribaculum Moore and Moore 1994| Porphyromonas| Porphyromonas Shah and Collins 1988 emend. Kawamura et al. 2015| Porphyromonas Shah and Collins 1988 emend. Wagener et al. 2014| Porphyromonas Shah and Collins 1988 emend. Willems and Collins 1995
Porphyromonas gingivalis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 33277| Bacteroides gingivalis| Bacteroides gingivalis Coykendall et al. 1980| CCUG 25893| CCUG 25928| CIP 103683| DSM 20709| JCM 12257| NCTC 11834| Porphyromonas gingivalis| Porphyromonas gingivalis (Coykendall et al. 1980) Shah and Collins 1988 emend. Hahnke et al. 2016| strain 2561
Pathogen
Prevotella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Prevotella| Prevotella Shah and Collins 1990 emend. Sakamoto and Ohkuma 2012| Prevotella Shah and Collins 1990 emend. Willems and Collins 1995| Xylanibacter| Xylanibacter Ueki et al. 2006
Prevotellaceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Prevotellaceae| Prevotellaceae Krieg 2012
Propionibacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Arachnia| Arachnia Pine and Georg 1969| Propionibacterium| Propionibacterium Orla-Jensen 1909 (Approved Lists 1980) emend. Charfreitag et al. 1988| Propionibacterium Orla-Jensen 1909 (Approved Lists 1980) emend. Scholz and Kilian 2016| Propionicibacterium
Propionibacterium freudenreichii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacterium acidi propionici a" von Freudenreich and Orla-Jensen 1907| "Bacterium acidi propionici d" Sherman 1921| ATCC 6207| Bacterium acidi propionici a| Bacterium acidi propionici d| CCUG 7433| CIP 103026| DSM 20271| HAMBI 274| IFO 12424| LMG 16412| LMG:16412| NBRC 12424| NCTC 10470| NRRL B-3523| Propionibacterium freudenreichii| Propionibacterium freudenreichii van Niel 1928| Propionicibacterium freudenreichii
Proteus mirabilis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 29906| CCUG 26767| CIP 103181| DSM 4479| JCM 1669| LMG 3257| LMG:3257| NCTC 11938| Proteus mirabilis| Proteus mirabilis Hauser 1885
Pseudobutyrivibrio [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Pseudobutyrivibrio| Pseudobutyrivibrio van Gylswyk et al. 1996
Pseudoflavonifractor [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Pseudoflavonifractor| Pseudoflavonifractor Carlier et al. 2010
Pseudomonadota [phylum]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Alphaproteobacteraeota| Alphaproteobacteraeota Oren et al. 2015| Alphaproteobacteriota| Proteobacteria| Proteobacteria [class] Stackebrandt et al. 1988| Proteobacteria Garrity et al. 2005| purple bacteria| purple bacteria and relatives| purple non-sulfur bacteria| purple photosynthetic bacteria| purple photosynthetic bacteria and relatives
Roseburia [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Roseburia| Roseburia Stanton and Savage 1983| Roseburya| Roseburyella
Roseburia intestinalis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| DSM 14610| NCIMB 13810| Roseburia intestinalis| Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006| strain L1-82
Ruminococcaceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Ruminococcaceae| Ruminococcaceae Rainey 2010
Ruminococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Ruminococcus| Ruminococcus Sijpesteijn 1948
Ruminococcus bromii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 27255| Ruminococcus bromii| Ruminococcus bromii Moore et al. 1972
Salmonella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Salmonella| Salmonella Lignieres 1900
Pathogen
Segatella copri [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| DSM 18205| JCM 13464| Prevotella copri| Prevotella copri Hayashi et al. 2007 emend. Hahnke et al. 2016| Prevotella sp. 'Indica Stool'| Prevotella sp. CB18| Prevotella sp. CB23| Prevotella sp. CB26| Prevotella sp. CB28| Prevotella sp. CB7| strain CB7
Over 70%ile Indicator of mycotoxin present
Shigella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Shigella| Shigella Castellani and Chalmers 1919
Pathogen
Solobacterium moorei [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| CIP 106864| DSM 22971| JCM 10645| Solobacterium moorei| Solobacterium moorei Kageyama and Benno 2000| strain RCA59-74| unclassified Clostridium group RCA59
Staphylococcaceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Staphylococcaceae| Staphylococcaceae Schleifer and Bell 2010| Staphylococceae| Staphylococceae Prevot 1940| Staphylococcus group
Staphylococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Aurococcus" Winslow and Rogers 1906| Aurococcus| Staphylococcus| Staphylococcus Rosenbach 1884
Staphylococcus epidermidis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Albococcus epidermidis" Winslow and Winslow 1908| "Micrococcus epidermidis" (Winslow and Winslow 1908) Hucker 1924| "Staphylococcus epidermidis albus" Welch 1891| Albococcus epidermidis| ATCC 14990| CCM 2124| CCUG 18000 A| CCUG 39508| CIP 81.55| DSM 20044| JCM 2414| LMG 10474| LMG:10474| Micrococcus epidermidis| NBRC 100911| NCAIM B.01066| NCTC 11047| Staphylococcus epidermidis| Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916| Staphylococcus epidermidis albus
Nosocomial and opportunistic infections
Staphylococcus pasteuri [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 51129| CCUG 32420| CIP 103540| DSM 10656| Staphylococcus pasteuri| Staphylococcus pasteuri Chesneau et al. 1993| strain BM9357
Subdoligranulum [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Subdoligranulum| Subdoligranulum Holmstrom et al. 2004
Tannerella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Tannerella| Tannerella Sakamoto et al. 2002
Thomasclavelia ramosa [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus ramosus" Veillon and Zuber 1898| "Erysipelatoclostridium ramosum" Yutin and Galperin 2013| "Nocardia ramosa" Vuillemin 1931| "Ramibacterium ramosum" (Veillon and Zuber 1898) Prevot 1938| ATCC 25582| Bacillus ramosus| BCRC 14518| CCRC 14518| CCRC:14518| CCUG 24038| Clostridium ramosum| Clostridium ramosum (Veillon and Zuber 1898) Holdeman et al. 1971| DSM 1402| Erysipelatoclostridium ramosum| JCM 1298| NCIMB 10673| NCTC 11812| Nocardia ramosa| Ramibacterium ramosum| VPI 0427
Turicibacter [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Turicibacter| Turicibacter Bosshard et al. 2002
Tyzzerella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Tyzzerella" Yutin and Galperin 2013| Tyzzerella
Veillonella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Veillonella| Veillonella Prevot 1933 (Approved Lists 1980) emend. Aujoulat et al. 2014| Veillonella Prevot 1933 (Approved Lists 1980) emend. Mays et al. 1982
Veillonellaceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| cluster IX| Megasphaera group| Veillonellaceae| Veillonellaceae Rogosa 1971 (Approved Lists 1980) emend. Campbell et al. 2015| Veillonellaceae Rogosa 1971 (Approved Lists 1980) emend. Marchandin et al. 2010
Associated with Iron Deficiency (High)
Vibrio cholerae [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillo virgola del Koch" Trevisan 1884| "Bacillus cholerae" (Pacini 1854) Trevisan 1884| "Bacillus cholerae-asiaticae" Trevisan 1884| "Kommabacillus" Koch 1884| "Liquidivibrio cholerae" (Pacini 1854) Orla-Jensen 1909| "Microspira comma" Schroeter 1886| "Pacinia cholerae-asiaticae" (Trevisan 1884) Trevisan 1885| "Spirillum cholerae" (Pacini 1854) Mac1889| "Spirillum cholerae-asiaticae" (Trevisan 1884) Zopf 1885| "Vibrio cholera" (sic) Pacini 1854| "Vibrio cholerae-asiaticae" (Trevisan 1884) Pfeiffer 1896| "Vibrio comma" (Schroeter 1886) Blanchard 1906| ATCC 14035| ATCC 14547 [[Vibrio albensis]]| Bacillo virgola del Koch| Bacillus cholerae| Bacillus cholerae-asiaticae| CCUG 48664 [[Vibrio albensis]]| CCUG 9118 A| CECT 514| CIP 62.13| Kommabacillus| Liquidivibrio cholerae| LMG 4406 [[Vibrio albensis]]| LMG:4406 [[Vibrio albensis]]| Microspira comma| NCIMB 41 [[Vibrio albensis]]| NCTC 8021| Pacinia cholerae-asiaticae| Spirillum cholerae| Spirillum cholerae-asiaticae| Vibrio albensis| Vibrio albensis Lehmann and Neumann 1896| Vibrio cholera| Vibrio cholerae| Vibrio cholerae biovar albensis| Vibrio cholerae bv. albensis| Vibrio cholerae Pacini 1854| Vibrio cholerae-asiaticae| Vibrio comma
Cholera
Vibrio parahaemolyticus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Oceanomonas parahaemolytica" (Fujino et al. 1951) Miyamoto et al. 1961| "Pasteurella parahaemolytica" Fujino et al. 1951| ATCC 17802| Beneckea parahaemolytica| Beneckea parahaemolytica (Fujino et al. 1951) Baumann et al. 1971 (Approved Lists 1980)| CAIM 320| CCUG 14474| CCUG 15657| CCUG 4224| CIP 75.2| DSM 10027| IFO 12711| LMG 2850| LMG:2850| NBRC 12711| NCCB 77010| NCCB 77018| NCTC 10903| NRRL B-4167| Oceanomonas parahaemolytica| Pasteurella parahaemolytica| Vibrio parahaemolyticus| Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 (Approved Lists 1980) emend. West et al. 1986| Vibrio parahaemolyticus Sakazaki et al. 1963 (sic)
Vibrio vulnificus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 27562| BCRC 12905| Beneckea vulnifica| Beneckea vulnifica Reichelt et al. 1979 (Approved Lists 1980)| CAIM 610| CCRC 12905| CCRC:12905| CCUG 13448| CCUG 16394| CIP 75.4| DSM 10143| IFO 15645| JCM 3725| LMG 13545| LMG:13545| NBRC 15645| strain 324| Vibrio vulnificus| Vibrio vulnificus (Reichelt et al. 1979) Farmer 1980 emend. West et al. 1986
Seafood gastroenteritis, necrotizing wound infections, septicemia
Weissella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Leuconostoc paramesenteroides group| Weissella| Weissella Collins et al. 1994 emend. Padonou et al. 2010
Yersinia enterocolitica [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacterium enterocoliticum" Schleifstein and Coleman 1939| ATCC 9610| Bacterium enterocoliticum| CCUG 11291| CCUG 12369| CIP 80.27| DSM 4780| JCM 7577| LMG 7899| LMG:7899| NBRC 105693| NCTC 12982| Yersinia enterocolitica| Yersinia enterocolitica (Schleifstein and Coleman 1939) Frederiksen 1964
Yersiniosis
Yokenella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High