This is estimated from numbers produced - numbers consumed.
This is based on data available using Enzymes produced by the bacteria. Some probiotics may have no information. Numbers are based on being present in probiotics and not CFU declared to be in the probiotic(often missing on labels). The intent is to help identify possible causes for a particular response to a probiotic.
Compound Name | Estimate | Known As |
---|---|---|
(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate | 2 | (2S,4S)-4-Hydroxy-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate HTPA |
(3R)-3-Hydroxyacyl-[acyl-carrier protein] | -2 | (R)-3-Hydroxyacyl-[acyl-carrier protein] |
(3S)-Citryl-CoA | 0 | |
(6S)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide | -1 | (S)-NADH-hydrate (S)-NADHX (6S)-6-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide 6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide |
(6S)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide phosphate | -1 | (S)-NADPH-hydrate (S)-NADPHX (6S)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide 2'-phosphate |
(9Z)-Octadecenoic acid | 0.7 | (Z)-Octadec-9-enoic acid Oleate Oleic acid |
(R)-10-Hydroxystearate | -0.7 | |
(R)-2-Hydroxyglutarate | -0.5 | (R)-Hydroxyglutarate |
(R)-4'-Phosphopantothenoyl-L-cysteine | 0 | N-[(R)-4'-Phosphopantothenoyl]-L-cysteine |
(R)-5-Diphosphomevalonate | 0 | |
(R)-5-Phosphomevalonate | 0 | (R)-5-Phosphomevaloonic acid (R)-Mevalonic acid 5-phosphate |
(R)-Lactate | -1.3 | D-Lactate D-Lactic acid D-2-Hydroxypropanoic acid D-2-Hydroxypropionic acid |
(R)-Mevalonate | -2 | Mevalonic acid 3,5-Dihydroxy-3-methylvaleric acid |
(R)-Pantoate | -0.5 | Pantoate Pantoic acid |
(S)-2-Hydroxyacid | -0.3 | (S)-2-Hydroxy acid (S)-2-Hydroxyalkanoic acid (S)-2-Hydroxycarboxylic acid (2S)-2-Hydroxycarboxylate |
(S)-3-Hydroxy-3-methylglutaryl-CoA | 2 | Hydroxymethylglutaryl-CoA Hydroxymethylglutaroyl coenzyme A HMG-CoA 3-Hydroxy-3-methylglutaryl-CoA |
(S)-4,5-Dihydroxypentane-2,3-dione | 1 | (4S)-4,5-Dihydroxy-2,3-pentanedione |
(S)-Acetoin | 0 | (S)-2-Acetoin |
(S)-Dihydroorotate | -2 | (S)-4,5-Dihydroorotate L-Dihydroorotate L-Dihydroorotic acid Dihydro-L-orotic acid |
(S)-Lactate | -1 | L-Lactate L-Lactic acid |
(S)-Malate | -1 | L-Malate L-Apple acid L-Malic acid L-2-Hydroxybutanedioic acid Malate Malic acid |
(S,S)-Butane-2,3-diol | -0.2 | (S,S)-2,3-Butanediol (S,S)-2,3-Butylene glycol (2S,3S)-Butane-2,3-diol |
[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-6-N-(beta-D-Asp)-L-Lys-D-Ala-D-Ala)]n | 1 | |
[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n | -1 | |
[Enzyme]-cysteine | 0 | |
[Enzyme]-S-sulfanylcysteine | 0 | |
[GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala-D-Ala)]n-diphosphoundecaprenol | 0 | [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n-diphosphoundecaprenol [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala-D-Ala)]n+1-diphosphoundecaprenol [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n+1-diphosphoundecaprenol |
[Oxidized NADPH---hemoprotein reductase] | 1 | Oxidized flavoprotein |
[Protein]-FMN-L-Threonine | 1 | [Protein]-flavin mononucleotide-L-threonine [Protein]-riboflavin-5'-phosphate-L-threonine |
[Protein]-L-cysteine | 0.2 | Protein L-cysteine |
[Protein]-L-threonine | -1 | |
[Protein]-S-sulfanyl-L-cysteine | 0 | |
[Reduced NADPH---hemoprotein reductase] | -1 | Reduced flavoprotein |
1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate | 0 | |
1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate | 0 | 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxylate 1-(5'-Phosphoribosyl)-5-amino-4-carboxyimidazole 5'-Phosphoribosyl-5-amino-4-imidazolecarboxylate 1-(5'-Phosphoribosyl)-4-carboxy-5-aminoimidazole 5'-Phosphoribosyl-4-carboxy-5-aminoimidazole 5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate |
1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole | 0 | 1-(5'-Phosphoribosyl)-4-(N-succinocarboxamide)-5-aminoimidazole 5'-Phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate SAICAR |
1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide | 0 | 5'-Phosphoribosyl-5-amino-4-imidazolecarboxamide 5'-Phospho-ribosyl-5-amino-4-imidazole carboxamide AICAR 5-Aminoimidazole-4-carboxamide ribotide 5-Phosphoribosyl-4-carbamoyl-5-aminoimidazole 5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide 5-Amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide |
1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide | 2 | 5'-Phosphoribosyl-5-formamido-4-imidazolecarboxamide 5-Formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide FAICAR |
1,2,3-Trihydroxybenzene | 0.2 | Pyrogallol Pyrogallic acid 1,2,3-Benzenetriol |
1,2-Diacyl-3-alpha-D-glucosyl-sn-glycerol | 1 | 1,2-Diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol |
1,2-Diacyl-sn-glycerol | -1.2 | 1,2-Diacylglycerol L-1,2-Diacylglycerol |
10-Formyltetrahydrofolate | -0.3 | 10-Formyl-THF |
1-Acyl-sn-glycero-3-phosphocholine | -1 | 1-Acyl-sn-glycerol-3-phosphocholine alpha-Acylglycerophosphocholine 2-Lysolecithin 2-Lysophosphatidylcholine 1-Acylglycerophosphocholine |
1-Acyl-sn-glycerol 3-phosphate | 0 | 2-Lysophosphatidate Lysophosphatidate Lysophosphatidic acid |
1-Deoxy-D-xylulose 5-phosphate | 0.3 | |
2'-(5-Triphosphoribosyl)-3'-dephospho-CoA | 0 | 2'-(5-Triphospho-alpha-D-ribosyl)-3'-dephospho-CoA |
2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine | 0 | 1-(5'-Phosphoribosyl)-N-formylglycinamidine 5'-Phosphoribosyl-N-formylglycinamidine 5'-Phosphoribosylformylglycinamidine 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine |
2,3,4,5-Tetrahydrodipicolinate | -2 | Delta1-Piperidine-2,6-dicarboxylate L-2,3,4,5-Tetrahydrodipicolinate (S)-2,3,4,5-Tetrahydropyridine-2,6-dicarboxylate |
2,3-Bisphospho-D-glycerate | 0 | 2,3-Diphospho-D-glycerate D-Greenwald ester DPG |
2',3'-Cyclic nucleotide | -1 | Nucleoside 2',3'-cyclic phosphate |
2,5-Didehydro-D-gluconate | 0.7 | 2,5-Diketogluconic acid |
2-Dehydropantoate | 0.5 | |
2-Deoxy-D-ribose 1-phosphate | 0.2 | 2-Deoxy-alpha-D-ribose 1-phosphate |
2-Deoxy-D-ribose 5-phosphate | -0.3 | |
2'-Deoxyinosine 5'-phosphate | 1 | dIMP |
2'-Deoxyribonucleoside diphosphate | -0.8 | 2'-Deoxyribonucleoside 5'-diphosphate |
2-Deoxystreptamine antibiotic | -0.5 | |
2-Iminopropanoate | 0 | |
2-Methyl-3-oxopropanoate | 0.3 | 3-Oxo-2-methylpropanoate Methylmalonate semialdehyde |
2-Oxo acid | 0.3 | 2-Oxocarboxylate 2-Oxocarboxylic acid 2-Oxo carboxylate |
2-Oxo-2,3-dihydrofuran-5-acetate | 0.7 | 3-Oxoadipate enol-lactone 4,5-Dihydro-5-oxofuran-2-acetate 5-Oxo-4,5-dihydrofuran-2-acetate |
2-Oxo-3-hydroxy-4-phosphobutanoate | 0.5 | alpha-Keto-3-hydroxy-4-phosphobutyrate (3R)-3-Hydroxy-2-oxo-4-phosphonooxybutanoate (3R)-3-Hydroxy-2-oxo-4-phosphooxybutanoate |
2-Oxoglutaramate | 0.5 | 2-Oxoglutaramic acid alpha-Ketoglutaramate 2-Ketoglutaramate |
2-Oxoglutarate | -0.8 | Oxoglutaric acid 2-Ketoglutaric acid alpha-Ketoglutaric acid |
2-Phospho-D-glycerate | -1 | D-Glycerate 2-phosphate 2-Phospho-(R)-glycerate |
3-Dehydroquinate | -0.5 | 3-Dehydroquinic acid 5-Dehydroquinate 5-Dehydroquinic acid |
3-Dehydroshikimate | 1 | |
3-D-Glucosyl-1,2-diacylglycerol | 0.2 | 1,2-Diacyl-3-beta-D-glucosyl-sn-glycerol Monoglucosyldiglyceride Monoglucosyldiacylglycerol Glcbeta1->3acyl2Gro 1,2-Diacyl-3-O-(beta-D-glucopyranosyl)-sn-glycerol |
3-Hydroxy-2-methylpropanoate | -0.3 | 3-Hydroxyisobutyrate 3-Hydroxyisobutyric acid |
3''-O-Acetyl-ADP-D-ribose | -0.2 | |
3-Oxoacyl-[acyl-carrier protein] | 1 | |
3-Phospho-D-glycerate | -0.5 | D-Glycerate 3-phosphate 3-Phospho-(R)-glycerate 3-Phosphoglycerate |
3-Phospho-D-glyceroyl phosphate | 2 | 1,3-Bisphospho-D-glycerate (R)-2-Hydroxy-3-(phosphonooxy)-1-monoanhydride with phosphoric propanoic acid D-Glycerate 1,3-diphosphate |
3-Phosphonooxypyruvate | 1 | 3-Phosphonooxypyruvic acid 3-Phosphohydroxypyruvate 3-Phosphohydroxypyruvic acid 3-Phosphooxypyruvate |
3'-Ribonucleotide | -1 | 3'-Phosphomononucleotides 3'-Nucleoside monophosphate |
4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine | 0 | (4-Amino-2-methylpyrimidin-5-yl)methyl phosphate 4-Amino-5-hydroxymethyl-2-methylpyrimidine phosphate HMP-P |
4-Amino-5-hydroxymethyl-2-methylpyrimidine | -1 | Toxopyrimidine 4-Amino-2-methyl-5-pyrimidinemethanol HMP |
4-Amino-5-hydroxymethyl-2-methylpyrimidine diphosphate | 1 | 4-Amino-2-methyl-5-(diphosphooxymethyl)pyrimidine HMP-PP |
4-Aminobenzoate | -0.7 | ABEE 4-Aminobenzoic acid p-Aminobenzoate |
4-Methyl-2-oxopentanoate | 0.8 | 2-Oxoisocaproate |
4-Methylthio-2-oxobutanoic acid | -0.5 | 4-Methylthio-2-oxobutanoate 4-(Methylsulfanyl)-2-oxobutanoate 2-Keto-4-methylthiobutyric acid 2-Oxo-4-methylthiobutanoate 2-Oxo-4-methylthiobutanoic acid |
4-Nitrophenol | 1 | p-Nitrophenol PNP Niphen 4-Hydroxynitrobenzene |
4-Nitrophenyl phosphate | -1 | |
4-O-{Poly[(2R)-glycerophospho]-(2R)-glycerophospho}-N-acetyl-beta-D-mannosaminyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol | 0.8 | |
4-Phospho-L-aspartate | 1.8 | L-4-Aspartyl phosphate |
5,10-Methenyltetrahydrofolate | 1 | |
5,10-Methylenetetrahydrofolate | -2.8 | (6R)-5,10-Methylenetetrahydrofolate 5,10-Methylene-THF |
5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole | 0 | |
5'-Deoxyadenosine | 0 | |
5-Deoxy-D-ribose | 1 | |
5-Methyltetrahydrofolate | -1 | |
5-Methyltetrahydropteroyltri-L-glutamate | -1 | |
5'-Methylthioadenosine | -1 | Methylthioadenosine S-Methyl-5'-thioadenosine 5-Methylthioadenosine 5'-Deoxy-5'-(methylthio)adenosine Thiomethyladenosine MTA 5'-Deoxy-5'-(methylsulfanyl)adenosine |
5-Methylthio-D-ribose | 1 | S-Methyl-5-thio-D-ribose 5-(Methylsulfanyl)-D-ribose |
5'-O-Phosphonoadenylyl-(3'->5')-adenosine | 1 | pApA |
5-Oxopentanoate | -1 | Glutarate semialdehyde |
5-Phospho-alpha-D-ribose 1-diphosphate | 6.7 | 5-Phosphoribosyl diphosphate 5-Phosphoribosyl 1-pyrophosphate PRPP |
5-Phosphoribosylamine | -2 | 5-Phospho-beta-D-ribosylamine 5-Phospho-D-ribosylamine 5-Phosphoribosyl-1-amine |
5'-Phosphoribosylglycinamide | 0.7 | GAR N1-(5-Phospho-D-ribosyl)glycinamide Glycinamide ribonucleotide N1-(5-Phospho-beta-D-ribosyl)glycinamide |
5'-Phosphoribosyl-N-formylglycinamide | -0.7 | N-Formyl-GAR N-Formylglycinamide ribonucleotide N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide N2-Formyl-N1-(5-phospho-beta-D-ribosyl)glycinamide |
5'-Ribonucleotide | -0.8 | |
6-(Hydroxymethyl)-7,8-dihydropterin | 0 | 6-Hydroxymethyl-7,8-dihydropterin 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine |
6-Hydroxymethyl-7,8-dihydropterin diphosphate | 0 | (7,8-Dihydropterin-6-yl)methyl diphosphate 2-Amino-7,8-dihydro-4-hydroxy-6-(diphosphooxymethyl)pteridine 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate 7,8-Dihydropterin pyrophosphate |
6-Phospho-beta-D-glucosyl-(1,4)-D-glucose | -0.8 | Cellobiose 6'-phosphate Cellobiose 6-phosphate |
6-Phospho-D-gluconate | 0 | |
7,8-Dihydromonapterin | 0.7 | |
7,8-Dihydroneopterin | -2 | Dihydroneopterin 2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine |
7,8-Dihydroneopterin 3'-triphosphate | 0 | 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate 6-(L-erythro-1,2-Dihydroxypropyl 3-triphosphate)-7,8-dihydropterin 6-[(1S,2R)-1,2-Dihydroxy-3-triphosphooxypropyl]-7,8-dihydropterin |
7,8-Dihydroxanthopterin | 0.7 | |
8-Oxo-dGMP | 1 | 2'-Deoxy-7,8-dihydro-8-oxo-5'-guanylate 8-Hydroxydeoxyguanosine 5'-monophosphate |
8-Oxo-dGTP | -1 | 8-Oxodeoxyguanosine triphosphate 8-Oxo-7,8-dihydro-2'-deoxyguanosine 5'-triphosphate |
Acceptor | 1.8 | Hydrogen-acceptor A Oxidized donor |
Acetaldehyde | -0.5 | Ethanal |
Acetate | 3.5 | Acetic acid Ethanoic acid |
Acetoacetyl-[acp] | 1 | Acetoacetyl-[acyl-carrier protein] |
Acetoacetyl-CoA | 0 | Acetoacetyl coenzyme A 3-Acetoacetyl-CoA |
Acetyl phosphate | 4.3 | |
Acetyl-[citrate (pro-3S)-lyase] | 1 | |
Acetyl-CoA | -12.2 | Acetyl coenzyme A |
Acetyl-maltose | 1 | 6-O-Acetyl-alpha-D-glucopyranosyl-(1->4)-D-glucose |
Acyl phosphate | 1 | Fatty acyl phosphate |
Acyl-[acyl-carrier protein] | -3 | |
Acyl-carrier protein | 2 | ACP [Acyl-carrier protein] Holo-[acyl-carrier protein] |
Acyl-CoA | -1 | Acyl coenzyme A |
Adenine | 3 | 6-Aminopurine |
Adenosine | -1 | |
Adenosine 3',5'-bisphosphate | 0 | PAP 3'-Phosphoadenylate Phosphoadenosine phosphate |
Adenosyl cobyrinate a,c diamide | 1 | Adenosyl cobyrinate diamide Adenosylcob(III)yrinic acid a,c-diamide Adenosylcobyrinic acid a,c-diamide |
ADP | 68.5 | Adenosine 5'-diphosphate |
ADP-glucose | 0.2 | ADP-alpha-D-glucose Adenosine diphosphoglucose |
ADP-ribose | -0.8 | ADP-D-ribose Adenosine diphosphate ribose |
Alcohol | 1 | |
Aldehyde | 0.8 | RCHO |
Alkane | -0.5 | RH |
Alkane-alpha,omega-diamine | -0.2 | |
alpha,alpha'-Trehalose 6-phosphate | -0.7 | Trehalose 6-phosphate |
alpha-D-Galactose | -1 | |
alpha-D-Galactose 1-phosphate | 0 | alpha-D-Galactopyranose 1-phosphate |
alpha-D-Glucosamine 1-phosphate | -2 | D-Glucosamine 1-phosphate |
alpha-D-Glucose | -1 | |
alpha-D-Glucose 6-phosphate | -1 | |
alpha-D-Ribose 1-phosphate | 0.2 | Ribose 1-phosphate D-Ribose 1-phosphate |
Aminoimidazole ribotide | 0 | AIR 1-(5'-Phosphoribosyl)-5-aminoimidazole 5'-Phosphoribosyl-5-aminoimidazole 1-(5-Phospho-D-ribosyl)-5-aminoimidazole 5-Amino-1-(5-phospho-D-ribosyl)imidazole 5-Amino-1-(5-phospho-beta-D-ribosyl)imidazole |
Ammonia | 5.2 | NH3 |
AMP | 38.5 | Adenosine 5'-monophosphate Adenylic acid Adenylate 5'-AMP 5'-Adenylic acid 5'-Adenosine monophosphate Adenosine 5'-phosphate |
Anthranilate | 0.2 | Anthranilic acid o-Aminobenzoic acid Vitamin L1 2-Aminobenzoate |
Apo-[carboxylase] | -1 | [Biotin carboxyl-carrier protein]-L-lysine |
Arsenate ion | -1 | Arsenate |
Arsenite | 1 | Trisoxylatoarsine |
Aryl sulfate | 0 | Phenol sulfate |
ATP | -112.5 | Adenosine 5'-triphosphate |
Base | 0 | Nucleobase Base1 Base2 |
beta-D-Fructose 6-phosphate | 0 | beta-D-Fructofuranose 6-phosphate |
beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-O-P-Glu-L-Lys-D-Ala-D-Ala)-diphospho-ditrans,octacis-undecaprenol | -1 | |
beta-D-Glucose | 1 | beta-D-Glucopyranose |
beta-D-Glucose 1-phosphate | 0 | |
beta-D-Glucose 6-phosphate | 0.7 | |
beta-Lactam | -1 | |
Biotin | -1 | D-Biotin Vitamin H Coenzyme R |
Carbamate | 0 | Carbamic acid Aminoformic acid |
Carbamoyl phosphate | -0.2 | |
Carbonic acid | -0.3 | Dihydrogen carbonate H2CO3 |
Carboxybiotin-carboxyl-carrier protein | 0 | [Biotin carboxyl-carrier protein]-carboxybiotin-N6-L-lysine [Biotin carboxyl-carrier protein]-N6-carboxybiotinyl-L-lysine |
Carboxylate | 2 | R-COOH Monocarboxylate Carboxylic acid |
Carboxyphosphate | 0 | |
CDP-diacylglycerol | -0.2 | CDP-1,2-diacylglycerol 1,2-Diacyl-sn-glycero-3-cytidine-5'-diphosphate |
CDP-glycerol | 0.2 | |
Cellobiose | -0.2 | 1-beta-D-Glucopyranosyl-4-D-glucopyranose |
Chitobiose | -0.2 | Diacetylchitobiose N,N'-Diacetylchitobiose |
Cholic acid | 0.3 | Cholate 3alpha,7alpha,12alpha-Trihydroxy-5beta-cholanate 3alpha,7alpha,12alpha-Trihydroxy-5beta-cholanic acid |
Citrate | -1 | Citric acid 2-Hydroxy-1,2,3-propanetricarboxylic acid 2-Hydroxytricarballylic acid |
Cl- | -0.5 | Chloride Chloride ion |
CMP | 3.2 | Cytidine-5'-monophosphate Cytidylic acid |
CO2 | 12.3 | Carbon dioxide |
CoA | 12.8 | Coenzyme A CoA-SH |
Cob(II)alamin | -1 | Vitamin B12r |
Cob(II)yrinate a,c diamide | -1 | Cob(II)yrinate diamide Cob(II)yrinic acid a,c-diamide Cobyrinate a,c-diamide Cobyrinic acid a,c-diamide |
Cobamide coenzyme | 1 | Adenosylcobalamin Adenosylcob(III)alamin Deoxyadenosylcobalamin Cobamamide Vitamin B12 coenzyme 5,6-Dimethylbenzimidazolyl-5-deoxyadenosyl-cobamide (5'-Deoxy-5'-adenosyl)cobamide coenzyme (5,6-Dimethylbenzimidazolyl)cobamide coenzyme alpha-(5,6-Dimethylbenzimidazolyl)cobamide coenzyme 5'-Deoxy-5'-adenosylcobalamin 5'-Deoxy-5'-adenosyl vitamin B12 5'-Deoxy-5'-adenosyl-5,6-dimethylbenzimidazolylcobamide 5,6-Dimethylbenzimidazolyl-Co-5'-deoxy-5'-adenosylcobamide Calomide Cobalamin coenzyme Coenzyme B12 DMBC coenzyme Dibencozide Funacomide |
Coenzyme F420 | 0.2 | Oxidized coenzyme F420 Coenzyme gamma-F420-2 |
Coenzyme F420-0 | -0.2 | Factor 420-0 Oxidized coenzyme F420-0 |
Coenzyme F420-1 | 0 | |
CTP | -3 | Cytidine 5'-triphosphate Cytidine triphosphate |
Cyclic di-3',5'-adenylate | 0 | Cyclic di-AMP |
Cyclomaltodextrin | -0.7 | Cyclodextrin |
Cytidine | -1.5 | |
Cytosine | 0.2 | |
D-4'-Phosphopantothenate | 0 | (R)-4'-Phosphopantothenate |
D-Alanine | 0 | D-2-Aminopropionic acid D-Ala |
D-Alanyl-D-alanine | 0 | D-Ala-D-Ala |
D-Amino acid | 1 | |
dAMP | 1 | 2'-Deoxyadenosine 5'-phosphate 2'-Deoxyadenosine 5'-monophosphate Deoxyadenylic acid Deoxyadenosine monophosphate |
D-Aspartate | 0 | D-Aspartic acid |
dCDP | 1 | 2'-Deoxycytidine diphosphate 2'-Deoxycytidine 5'-diphosphate |
dCMP | -2 | Deoxycytidylic acid Deoxycytidine monophosphate Deoxycytidylate 2'-Deoxycytidine 5'-monophosphate |
Deamino-NAD+ | 0 | Deamido-NAD+ Deamido-NAD Nicotinic acid adenine dinucleotide |
Decaprenol phosphate | -1 | mono-trans, poly-cis-Decaprenyl phosphate trans,octacis-Decaprenyl phosphate |
Dehydroalanine | 0 | 2-Aminoacrylate 2-Aminoprop-2-enoate |
Deoxyadenosine | -2 | 2'-Deoxyadenosine |
Deoxycytidine | -1 | 2'-Deoxycytidine |
Deoxyinosine | 1 | 2'-Deoxyinosine |
Deoxynucleoside | 0 | 2'-Deoxynucleoside 2-Deoxy-D-ribosyl-base 2-Deoxy-D-ribosyl-base1 2-Deoxy-D-ribosyl-base2 2'-Deoxyribonucleoside |
Deoxynucleoside triphosphate | -1 | 2'-Deoxyribonucleoside 5'-triphosphate 2'-Deoxyribonucleoside triphosphate |
Deoxyuridine | 0.8 | 2-Deoxyuridine 2'-Deoxyuridine |
Dephospho-CoA | -1 | Dephosphocoenzyme A 3'-Dephospho-CoA |
D-Erythrose 4-phosphate | 1 | |
D-Fructose | -1.8 | Levulose Fruit sugar D-arabino-Hexulose |
D-Fructose 1,6-bisphosphate | 0 | |
D-Fructose 1-phosphate | -0.2 | |
D-Fructose 6-phosphate | 1 | D-Fructose 6-phosphoric acid Neuberg ester |
D-Galactose | -1 | D-Galactopyranose |
D-Galactose 6-phosphate | 1 | 6-Phospho-D-galactose |
D-Gluconic acid | -1 | D-Gluconate D-gluco-Hexonic acid |
D-Glucono-1,5-lactone 6-phosphate | 1 | 6-Phospho-D-glucono-1,5-lactone |
D-Glucosamine | -0.8 | Chitosamine 2-Amino-2-deoxy-D-glucose |
D-Glucosamine 6-phosphate | 3.8 | D-Glucosamine phosphate |
D-Glucose | 2.7 | Grape sugar Dextrose Glucose D-Glucopyranose |
D-Glucose 1-phosphate | -1.5 | alpha-D-Glucose 1-phosphate Cori ester D-Glucose alpha-1-phosphate |
D-Glucose 6-phosphate | 1 | Glucose 6-phosphate Robison ester |
D-Glutamate | 0 | D-Glutamic acid D-Glutaminic acid D-2-Aminoglutaric acid |
D-Glyceraldehyde 3-phosphate | 0.2 | (2R)-2-Hydroxy-3-(phosphonooxy)-propanal Glyceraldehyde 3-phosphate |
D-Glycerate | -1.3 | Glycerate (R)-Glycerate Glyceric acid |
Diacetyl | 0.2 | Biacetyl Dimethylglyoxal 2,3-Butanedione |
Dicarboxylate | 0.5 | Dicarboxylic acid |
Dihydroflavodoxin | -1 | |
Dihydrofolate | 3 | Dihydrofolic acid 7,8-Dihydrofolate 7,8-Dihydrofolic acid 7,8-Dihydropteroylglutamate |
Dihydroneopterin phosphate | 0.7 | 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine phosphate 7,8-Dihydroneopterin 3'-phosphate |
Dihydropteroate | -0.3 | 7,8-Dihydropteroate |
Dihydrourocanate | -0.2 | Deaminohistidine 3-(1H-Imidazol-4-yl)propanoate |
Dimethylallyl diphosphate | -0.8 | 2-Isopentenyl diphosphate Delta2-Isopentenyl diphosphate Dimethylallyl pyrophosphate DMAPP Monoprenyl diphosphate Prenyl diphosphate |
Diphosphate | 48.8 | Diphosphoric acid Pyrophosphate Pyrophosphoric acid PPi |
dITP | -1 | 2'-Deoxyinosine-5'-triphosphate 2'-Deoxyinosine 5'-triphosphate |
di-trans,poly-cis-Undecaprenyl diphosphate | 0.8 | Undecaprenyl diphosphate Bactoprenyl diphosphate ditrans,octacis-Undecaprenyl diphosphate |
di-trans,poly-cis-Undecaprenyl phosphate | -1 | Undecaprenyl phosphate ditrans,octacis-Undecaprenyl phosphate |
D-Mannose | -1 | Mannose Seminose Carubinose D-Mannopyranose |
D-Mannose 6-phosphate | 0 | |
DNA | 0.8 | DNAn DNAn+1 (Deoxyribonucleotide)n (Deoxyribonucleotide)m (Deoxyribonucleotide)n+m Deoxyribonucleic acid |
DNA 6-methylaminopurine | 1 | N6-Methyladenine in DNA |
DNA adenine | -1 | Adenine in DNA |
DNA containing 6-O-methylguanine | -0.8 | |
D-Ribose | -0.2 | |
D-Ribose 5-phosphate | 0 | Ribose 5-phosphate |
D-Ribulose 5-phosphate | 2 | |
D-Sorbitol | -0.5 | D-Glucitol L-Gulitol Sorbitol |
dTDP | 0.8 | Deoxythymidine 5'-diphosphate |
dTDP-4-dehydro-beta-L-rhamnose | 0.7 | dTDP-4-dehydro-6-deoxy-beta-L-mannose dTDP-4-oxo-6-deoxy-L-mannose dTDP-4-oxo-L-rhamnose |
dTDP-4-oxo-6-deoxy-D-glucose | 0 | dTDP-4-dehydro-6-deoxy-D-glucose dTDP-4-dehydro-6-deoxy-alpha-D-glucose dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose dTDP-4-oxo-6-deoxy-alpha-D-glucose dTDP-4-dehydro-6-deoxy-alpha-D-galactose dTDP-4-dehydro-6-deoxy-D-galactose dTDP-6-deoxy-D-xylo-hexos-4-ulose dTDP-6-deoxy-D-xylo-4-hexulose 4,6-Dideoxy-4-oxo-dTDP-D-glucose |
dTDP-glucose | 0 | dTDP-D-glucose dTDP-alpha-D-glucose |
dTDP-L-rhamnose | -0.3 | dTDP-6-deoxy-L-mannose dTDP-6-deoxy-beta-L-mannose dTDP-beta-L-rhamnose |
dTMP | 1.2 | Thymidine 5'-phosphate Deoxythymidine 5'-phosphate Thymidylic acid 5'-Thymidylic acid Thymidine monophosphate Deoxythymidylic acid Thymidylate |
dTTP | -0.3 | Deoxythymidine triphosphate Deoxythymidine 5'-triphosphate TTP |
dUMP | 1 | Deoxyuridylic acid Deoxyuridine monophosphate Deoxyuridine 5'-phosphate 2'-Deoxyuridine 5'-phosphate |
dUTP | -1 | 2'-Deoxyuridine 5'-triphosphate |
D-Xylulose 5-phosphate | 0 | |
FAD | 0 | Flavin adenine dinucleotide |
Fatty acid | -1 | |
Fe2+ | 0.2 | Fe(II) Ferrous ion Iron(2+) |
Flavin | 0.8 | |
Flavodoxin semiquinone | 1 | |
FMN | 0.8 | Riboflavin-5-phosphate Flavin mononucleotide |
Folinic acid | -1 | Leucovorin 5-Formyltetrahydrofolate L(-)-5-Formyl-5,6,7,8-tetrahydrofolic acid |
Formate | 0.5 | Methanoic acid Formic acid |
Formyl-CoA | 0.2 | |
Formyl-L-methionyl peptide | -1 | |
Fumarate | 2 | Fumaric acid trans-Butenedioic acid |
Gallate | -0.2 | Gallic acid 3,4,5-Trihydroxybenzoic acid 3,4,5-Trihydroxybenzoate Pyrogallol-5-carboxylic acid |
GDP | 4.3 | Guanosine 5'-diphosphate Guanosine diphosphate |
Geranyl diphosphate | 0 | |
Geranylgeranyl diphosphate | 0.8 | Geranylgeranyl pyrophosphate all-trans-Geranylgeranyl diphosphate all-trans-Geranylgeranyl pyrophosphate (2E,6E,10E)-3,7,11,15-Tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate |
Glutaminyl-tRNA | 1 | L-Glutaminyl-tRNA(Gln) Glutaminyl-tRNA(Gln) Gln-tRNA(Gln) |
Glutarate | 1 | Glutaric acid Pentanedioic acid 1,3-Propanedicarboxylic acid |
Glutaredoxin | -1 | |
Glutathione | -1.8 | 5-L-Glutamyl-L-cysteinylglycine N-(N-gamma-L-Glutamyl-L-cysteinyl)glycine gamma-L-Glutamyl-L-cysteinyl-glycine GSH Reduced glutathione |
Glutathione disulfide | 0.8 | GSSG Oxiglutatione Oxidized glutathione |
Glycerol | -0.3 | Glycerin 1,2,3-Trihydroxypropane 1,2,3-Propanetriol |
Glycerone | -0.3 | Dihydroxyacetone 1,3-Dihydroxyacetone 1,3-Dihydroxy-2-propanone 1,3-Dihydroxypropan-2-one |
Glycerone phosphate | 3.3 | Dihydroxyacetone phosphate 3-Hydroxy-2-oxopropyl phosphate |
Glycerophosphodiester | -1 | |
Glycine | -1.5 | Aminoacetic acid Gly |
Glycocholate | -0.3 | Glycocholic acid 3alpha,7alpha,12alpha-Trihydroxy-5beta-cholan-24-oylglycine |
Glycolaldehyde | 1.3 | Hydroxyacetaldehyde |
Glycyl-tRNA(Gly) | 1 | |
GMP | 1.8 | Guanosine 5'-phosphate Guanosine monophosphate Guanosine 5'-monophosphate Guanylic acid |
GTP | -3.2 | Guanosine 5'-triphosphate |
Guanosine 3',5'-bis(diphosphate) | -1 | Guanosine 3'-diphosphate 5'-diphosphate Guanosine 5'-diphosphate,3'-diphosphate |
Guanosine 3'-diphosphate 5'-triphosphate | 1 | Guanosine 5'-triphosphate,3'-diphosphate |
H+ | 31 | Hydron |
HCO3- | -4.3 | Hydrogencarbonate Bicarbonate Hydrogen carbonate Acid carbonate |
Hexadecanoic acid | 1 | Hexadecanoate Hexadecylic acid Palmitic acid Palmitate Cetylic acid |
Holo-[carboxylase] | 1 | Biotin-carboxyl-carrier protein [Biotin carboxyl-carrier protein]-biotin-N6-L-lysine [Biotin carboxyl-carrier protein]-N6-biotinyl-L-lysine |
Holo-[citrate (pro-3S)-lyase] | 0 | |
Hydrogen peroxide | 0.2 | H2O2 Oxydol |
Hydrogen selenide | 1 | Selenide |
Hydrogen sulfide | -1 | Hydrogen-sulfide H2S Sulfide |
Hydroquinone | 1.3 | p-Hydroquinone Quinol Reduced quinone |
Hydroxypyruvate | 0.3 | Hydroxypyruvic acid 3-Hydroxypyruvate 3-Hydroxypyruvic acid |
Hypoxanthine | 1 | Purine-6-ol |
IMP | -4 | Inosinic acid Inosine monophosphate Inosine 5'-monophosphate Inosine 5'-phosphate 5'-Inosinate 5'-Inosinic acid 5'-Inosine monophosphate 5'-IMP |
Indole | 0 | 2,3-Benzopyrrole |
Indoleglycerol phosphate | 0 | 1-C-(Indol-3-yl)glycerol 3-phosphate (3-Indolyl)-glycerol phosphate C1-(3-Indolyl)-glycerol 3-phosphate (1S,2R)-1-C-(Indol-3-yl)glycerol 3-phosphate Indole-3-glycerol phosphate |
Inosine | 1 | |
Isopentenyl diphosphate | -3.3 | Delta3-Isopentenyl diphosphate Delta3-Methyl-3-butenyl diphosphate 3-Methylbut-3-en-1-yl diphosphate |
ITP | -1 | Inosine 5'-triphosphate Inosine triphosphate Inosine tripolyphosphate |
Ketone | 0.8 | R-CO-R' |
Lactate | 1 | Lactic acid 2-Hydroxypropanoic acid 2-Hydroxypropionic acid |
L-Alanine | -0.8 | L-2-Aminopropionic acid L-alpha-Alanine |
L-Alanyl-tRNA | 1 | L-Alanyl-tRNA(Ala) |
L-Arginine | -1.2 | (S)-2-Amino-5-guanidinovaleric acid L-Arg |
L-Arginyl-tRNA(Arg) | 1 | L-Arginyl-tRNA |
L-Asparagine | 0 | 2-Aminosuccinamic acid |
L-Asparaginyl-tRNA(Asn) | 2 | Asn-tRNA(Asn) Asparaginyl-tRNA(Asn) |
L-Aspartate | -7 | L-Aspartic acid 2-Aminosuccinic acid L-Asp |
L-Aspartate 4-semialdehyde | -0.7 | Aspartate beta-semialdehyde L-Aspartic 4-semialdehyde |
L-Aspartyl-tRNA(Asn) | -1 | Asp-tRNA(Asn) Aspartyl-tRNA(Asn) |
L-Aspartyl-tRNA(Asp) | 1 | |
L-Citrulline | 0.5 | 2-Amino-5-ureidovaleric acid Citrulline |
L-Cysteine | -2 | L-2-Amino-3-mercaptopropionic acid |
L-Cysteine-S-conjugate | -1 | S-Aryl-L-cysteine |
L-Cysteinyl-tRNA(Cys) | 1 | |
L-Glutamate | 5.2 | L-Glutamic acid L-Glutaminic acid Glutamate |
L-Glutamine | -8.5 | L-2-Aminoglutaramic acid |
L-Glutamyl-tRNA(Gln) | -1 | Glu-tRNA(Gln) Glutamyl-tRNA(Gln) |
L-Histidine | -1 | (S)-alpha-Amino-1H-imidazole-4-propionic acid |
L-Histidyl-tRNA(His) | 1 | |
L-Homocysteine | -0.3 | L-2-Amino-4-mercaptobutyric acid Homocysteine |
L-Homoserine | -0.5 | 2-Amino-4-hydroxybutyric acid |
Lipopolysaccharide | -1 | LPS |
L-Isoleucine | -1 | 2-Amino-3-methylvaleric acid |
L-Isoleucyl-tRNA(Ile) | 1 | |
LL-2,6-Diaminoheptanedioate | 0 | LL-2,6-Diaminopimelate LL-2,6-Diaminopimelic acid |
L-Leucine | -1.8 | 2-Amino-4-methylvaleric acid (2S)-alpha-2-Amino-4-methylvaleric acid (2S)-alpha-Leucine |
L-Leucyl-tRNA | 1 | L-Leucyl-tRNA(Leu) |
L-Lysine | -1 | Lysine acid 2,6-Diaminohexanoic acid |
L-Lysyl-tRNA | 1 | L-Lysyl-tRNA(Lys) |
L-Methionine | -1 | Methionine L-2-Amino-4methylthiobutyric acid |
L-Methionine (R)-S-oxide | 1 | |
L-Methionine (S)-S-oxide | 0.8 | |
L-Methionyl-tRNA | 1 | L-Methionyl-tRNA(Met) |
L-Ornithine | -1.3 | (S)-2,5-Diaminovaleric acid (S)-2,5-Diaminopentanoic acid (S)-2,5-Diaminopentanoate |
L-Phenylalanine | -1 | (S)-alpha-Amino-beta-phenylpropionic acid |
L-Phenylalanyl-tRNA(Phe) | 1 | |
L-Proline | -1 | 2-Pyrrolidinecarboxylic acid |
L-Prolyl-tRNA(Pro) | 1 | |
L-Selenocysteine | -1 | |
L-Serine | -2 | L-2-Amino-3-hydroxypropionic acid L-3-Hydroxy-alanine Serine |
L-Seryl-tRNA(Ser) | 1 | |
L-Threonine | -1.7 | 2-Amino-3-hydroxybutyric acid |
L-Threonylcarbamoyladenylate | 0 | L-Threonylcarbamoyl-AMP TC-AMP |
L-Threonyl-tRNA(Thr) | 1 | |
L-Tryptophan | -0.8 | Tryptophan (S)-alpha-Amino-beta-(3-indolyl)-propionic acid |
L-Tyrosine | -1 | (S)-3-(p-Hydroxyphenyl)alanine (S)-2-Amino-3-(p-hydroxyphenyl)propionic acid Tyrosine |
L-Tyrosyl-tRNA(Tyr) | 1 | |
L-Valine | -1 | 2-Amino-3-methylbutyric acid |
L-Valyl-tRNA(Val) | 1 | |
Malonyl-[acyl-carrier protein] | -1 | Malonyl-[acp] |
Malonyl-CoA | 1 | Malonyl coenzyme A |
Maltodextrin | 0.7 | Maltodextrin(n) Maltodextrin(n-2) n+2 Maltodextrin Linear maltodextrin Maltooligosaccharide |
Maltose | -2 | Malt sugar alpha-D-Glucopyranosyl-(1->4)-D-glucopyranose |
Maltose 6'-phosphate | 0.3 | |
Membrane-derived-oligosaccharide 6-(glycerophospho)-D-glucose | 1 | |
Membrane-derived-oligosaccharide D-glucose | -1 | |
meso-2,6-Diaminoheptanedioate | 0 | meso-2,6-Diaminopimelate meso-2,6-Diaminopimelic acid meso-Diaminoheptanedioate |
Methionyl peptide | 1 | |
Monoamide of dicarboxylate | -0.5 | Monoamide of dicarboxylic acid |
N-(5-Phospho-D-ribosyl)anthranilate | -0.2 | N-(5-Phospho-beta-D-ribosyl)anthranilate N-(5-Phosphoribosyl)anthranilic acid |
N,N'-Diacetylchitobiose 6'-phosphate | 0.2 | |
N3-Acetyl-2-deoxystreptamine antibiotic | 0.5 | N3'-Acetyl-2-deoxystreptamine antibiotic |
N5-(Cytidine 5'-diphosphoramidyl)-L-glutamine | 0.2 | |
N5-Phospho-L-glutamine | -0.2 | |
N6-(1,2-Dicarboxyethyl)-AMP | 0 | N6-(1,2-Dicarboxyethyl)AMP Adenylosuccinate Adenylosuccinic acid |
N6-Acetyl-LL-2,6-diaminoheptanedioate | -1 | N2-Acetyl-LL-2,6-diaminoheptanedioate N6-Acetyl-LL-2,6-diaminopimelate N2-Acetyl-LL-2,6-diaminopimelate N6-Acetyl-L-2,6-diaminoheptanedioate N6-Acetyl-L-2,6-diaminopimelate N-Acetyl-LL-2,6-diaminoheptanedioate |
N6-L-Threonylcarbamoyladenine in tRNA | 1 | t6A in tRNA |
N-Acetyl-alpha-D-glucosamine 1-phosphate | 0 | |
N-Acetyl-alpha-D-glucosaminyl-diphospho-trans,octacis-decaprenol | 1 | |
N-Acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenol | 1 | N-Acetyl-beta-D-mannosaminyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol |
N-Acetyl-D-glucosamine 6-phosphate | -1.3 | |
N-Acetyl-D-glucosaminyldiphosphoundecaprenol | 0 | N-Acetyl-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol N-Acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol Lipid I |
N-Acetyldiamine | 0.2 | |
N-Acetyl-L-2-amino-6-oxopimelate | 1 | L-2-Acetamido-6-oxoheptanedioate L-2-Acetamido-6-oxopimelate |
N-Acetylmuramic acid 6-phosphate | 0.3 | N-Acetylmuramate 6-phosphate MurNAc 6-phosphate |
NAD+ | -17 | NAD Nicotinamide adenine dinucleotide DPN Diphosphopyridine nucleotide Nadide beta-NAD+ |
NADH | 16.5 | DPNH Reduced nicotinamide adenine dinucleotide |
NADP+ | -19.7 | NADP Nicotinamide adenine dinucleotide phosphate beta-Nicotinamide adenine dinucleotide phosphate TPN Triphosphopyridine nucleotide beta-NADP+ |
NADPH | 21.7 | TPNH Reduced nicotinamide adenine dinucleotide phosphate |
N-Carbamoyl-L-aspartate | 2 | |
N-D-Ribosylpurine | -0.8 | Purine nucleoside Purine ribonucleoside |
N-Formyl-L-glutamate | -0.2 | |
Nicotinamide | 0.7 | Nicotinic acid amide Niacinamide Vitamin PP |
Nicotinate | -1 | Nicotinic acid Niacin 3-Pyridinecarboxylic acid |
Nicotinate D-ribonucleotide | -0.5 | beta-Nicotinate D-ribonucleotide Nicotinate ribonucleotide Nicotinic acid ribonucleotide |
N-Substituted amino acid | 1 | |
N-Substituted aminoacyl-tRNA | -1 | |
Nucleoside 3'-phosphate | 1 | |
Nucleoside triphosphate | -2 | NTP Nucleoside 5'-triphosphate |
O-Acetyl-L-serine | 0 | O3-Acetyl-L-serine |
O-D-Alanyl-poly(ribitol phosphate) | 1 | |
O-Phospho-4-hydroxy-L-threonine | -0.5 | 4-(Phosphonooxy)-threonine 4-(Phosphonooxy)-L-threonine 4-Phosphooxy-L-threonine |
O-Phospho-L-homoserine | -0.2 | |
O-Phospho-L-serine | -0.5 | L-O-Phosphoserine 3-Phosphoserine Dexfosfoserine 3-Phospho-L-serine |
Orotate | 2 | Orotic acid Uracil-6-carboxylic acid |
Orotidine 5'-phosphate | -2 | Orotidylic acid |
Orthophosphate | 46.2 | Phosphate Phosphoric acid Orthophosphoric acid |
Oxalate | -0.3 | Oxalic acid Ethanedioic acid |
Oxaloacetate | -0.2 | Oxalacetic acid Oxaloacetic acid 2-Oxobutanedioic acid 2-Oxosuccinic acid keto-Oxaloacetate |
Oxalyl-CoA | 0.2 | |
Oxidized ferredoxin | 2 | Oxidized ferredoxin [iron-sulfur] cluster |
Oxidized flavodoxin | 1 | |
Oxygen | -1.3 | O2 |
P1,P4-Bis(5'-guanosyl) tetraphosphate | -0.8 | GppppG Bis(5'-guanosyl) tetraphosphate |
Palmitoyl-CoA | -1 | Hexadecanoyl-CoA |
Pantetheine 4'-phosphate | -1 | 4'-Phosphopantetheine Phosphopantetheine D-Pantetheine 4'-phosphate |
Pantothenate | -1 | Pantothenic acid (R)-Pantothenate |
Peptide-L-methionine | -1.7 | |
Peptide-L-methionine (R)-S-oxide | 0.8 | |
Peptide-L-methionine (S)-S-oxide | 0.8 | |
Peptidylproline (omega=0) | 1 | |
Peptidylproline (omega=180) | -1 | |
Phenol | 1 | |
Phenyl acetate | -1 | |
Phosphatidate | 1.2 | Phosphatidic acid 1,2-Diacyl-sn-glycerol 3-phosphate 3-sn-Phosphatidate |
Phosphatidylethanolamine | 0.2 | (3-Phosphatidyl)ethanolamine (3-Phosphatidyl)-ethanolamine Cephalin O-(1-beta-Acyl-2-acyl-sn-glycero-3-phospho)ethanolamine 1-Acyl-2-acyl-sn-glycero-3-phosphoethanolamine L-1-Phosphatidylethanolamine |
Phosphatidylglycerol | -1 | 3-(3-sn-Phosphatidyl)glycerol 3(3-Phosphatidyl-)glycerol PtdGro |
Phosphatidylglycerophosphate | 1 | 1-(3-sn-Phosphatidyl)-sn-glycerol 3-phosphate 3-(3-Phosphatidyl)-D-glycerol 1-phosphate 1,2-Diacyl-sn-glycero-3-phospho-sn-glycerol 3'-phosphate |
Phosphatidylserine | -0.2 | Phosphatidyl-L-serine 1,2-Diacyl-sn-glycerol 3-phospho-L-serine 3-O-sn-Phosphatidyl-L-serine O3-Phosphatidyl-L-serine L-1-Phosphatidylserine |
Phosphoenolpyruvate | 0.8 | Phosphoenolpyruvic acid PEP |
Phospholipid cyclopropane fatty acid | 1 | |
Phospholipid olefinic fatty acid | -1 | |
Phosphoprotein | 1 | |
Poly(ribitol phosphate) | -1 | Poly-1,5-ribitol phosphate (Ribitol phosphate)n (Ribitol phosphate)n+1 |
Primary alcohol | -0.8 | 1-Alcohol |
Protein | -1 | |
Protein histidine | 2.3 | Protein L-histidine [Protein]-L-histidine |
Protein lysine | 1.7 | Peptidyl-L-lysine [Protein]-L-lysine |
Protein N(pi)-phospho-L-histidine | -3 | Protein N-pros-phospho-L-histidine Protein N-pros-phosphohistidine Protein Npi-phospho-L-histidine |
Protein N6-acetyl-L-lysine | -0.7 | Acetylprotein [Protein]-N6-acetyl-L-lysine |
Protein S-methyl-L-cysteine | 0.8 | |
Protein tyrosine | 1 | [Protein]-L-tyrosine |
Protein tyrosine phosphate | -1 | [Protein]-L-tyrosine phosphate |
Protein-L-arginine | 1 | Peptide L-arginine |
Purine | 0.8 | Purine base |
Putrescine | 1 | 1,4-Butanediamine 1,4-Diaminobutane Tetramethylenediamine Butane-1,4-diamine |
Pyridoxal | -1 | |
Pyridoxal phosphate | 1 | Pyridoxal 5'-phosphate Pyridoxal 5-phosphate PLP |
Pyruvate | 2.3 | Pyruvic acid 2-Oxopropanoate 2-Oxopropanoic acid Pyroracemic acid |
Quinolinate | 0.5 | Pyridine-2,3-dicarboxylate Quinolinic acid 2,3-Pyridinedicarboxylic acid |
Quinone | -1.3 | |
RCl | 0.5 | |
Reduced acceptor | -1.8 | AH2 Hydrogen-donor Donor |
Reduced ferredoxin | -2 | Reduced ferredoxin [iron-sulfur] cluster |
Reduced flavin | -0.8 | |
Reduced flavodoxin | -1 | |
Reduced FMN | -0.8 | FMNH2 |
Riboflavin | -1 | Lactoflavin 7,8-Dimethyl-10-ribitylisoalloxazine Vitamin B2 |
Ribonucleoside | 1.8 | |
Ribonucleoside diphosphate | 0.8 | Ribonucleoside 5'-diphosphate |
Ribonucleoside triphosphate | 0 | Ribonucleoside 5'-triphosphate |
RNA | 0 | RNAn RNAn+1 RNA(linear) (Ribonucleotide)n (Ribonucleotide)m (Ribonucleotide)n+m Ribonucleic acid |
S-Adenosyl-L-homocysteine | 17.5 | S-Adenosylhomocysteine |
S-Adenosyl-L-methionine | -18.5 | S-Adenosylmethionine AdoMet SAM |
Secondary alcohol | -0.8 | R-CHOH-R' |
Shikimate | -0.5 | Shikimic acid 3,4,5-Trihydroxy-1-cyclohexenecarboxylic acid |
Siroheme | -0.2 | |
Sirohydrochlorin | 0.2 | |
S-Methyl-L-methionine | -0.3 | |
sn-Glycero-3-phosphocholine | 1 | Glycerophosphocholine |
sn-Glycerol 1-phosphate | 1 | sn-Gro-1-P L-Glycerol 1-phosphate |
sn-Glycerol 3-phosphate | -2.7 | Glycerophosphoric acid D-Glycerol 1-phosphate |
Sorbitol 6-phosphate | 0.5 | D-Sorbitol 6-phosphate D-Glucitol 6-phosphate |
S-Ribosyl-L-homocysteine | 0 | S-D-Ribosyl-L-homocysteine Ribose-5-S-homocysteine S-Ribosylhomocysteine S-(5-Deoxy-D-ribos-5-yl)-L-homocysteine |
Substituted beta-amino acid | 1 | |
Succinate | 2 | Succinic acid Butanedionic acid Ethylenesuccinic acid |
Succinate semialdehyde | -2 | Succinic semialdehyde 4-Oxobutanoate |
Tetrahydrofolate | 2.2 | 5,6,7,8-Tetrahydrofolate Tetrahydrofolic acid THF (6S)-Tetrahydrofolate (6S)-Tetrahydrofolic acid (6S)-THFA |
Tetrahydropteroyltri-L-glutamate | 1 | (6S)-H4PteGlu3 |
THF-polyglutamate | 0 | Tetrahydropteroyl-[gamma-Glu]n Tetrahydrofolyl-[Glu](n-1) (6S)-H4PteGlu(n) Tetrahydropteroyl-[gamma-Glu]n+1 Tetrahydrofolyl-[Glu](n) |
Thiamin diphosphate | 1 | Thiamine diphosphate Thiamin pyrophosphate TPP ThPP |
Thiamin monophosphate | -1 | Thiamine monophosphate Thiamin phosphate Thiamine phosphate TMP |
Thiamine | 0 | Thiamin Vitamin B1 Aneurin Antiberiberi factor |
Thiol | 1 | Mercaptan |
Thioredoxin | 3.5 | Reduced thioredoxin |
Thioredoxin disulfide | -3.5 | Oxidized thioredoxin Thioredoxin sulfide |
Thymidine | -1.2 | Deoxythymidine |
Thymine | 0.2 | 5-Methyluracil |
trans,trans-Farnesyl diphosphate | -0.8 | Farnesyl diphosphate Farnesyl pyrophosphate 2-trans,6-trans-Farnesyl diphosphate (2E,6E)-Farnesyl diphosphate |
trans-2,3-Dehydroacyl-[acyl-carrier protein] | 3 | trans-2-Enoyl-[acyl-carrier protein] |
Triphosphate | 1 | Triphosphoric acid Tripolyphosphate Inorganic triphosphate |
tRNA | 2 | tRNA(n) tRNA(n+1) transfer RNA |
tRNA adenine | -1 | Adenosine in tRNA |
tRNA precursor | -1 | |
tRNA uridine | -1 | Uracil in tRNA |
tRNA with a 3' CC end | 0 | tRNA with a 3' CC |
tRNA with a 3' CCA end | 1 | |
tRNA with a 3' cytidine | -1 | |
tRNA(Ala) | 0 | |
tRNA(Arg) | -1 | |
tRNA(Asn) | -1 | |
tRNA(Asp) | -1 | |
tRNA(Cys) | -1 | |
tRNA(Gly) | -1 | |
tRNA(His) | -1 | |
tRNA(Ile) | -1 | |
tRNA(Leu) | -1 | |
tRNA(Lys) | -1 | |
tRNA(Met) | -1 | |
tRNA(Phe) | -1 | |
tRNA(Pro) | -1 | |
tRNA(Ser) | -1 | |
tRNA(Thr) | -1 | |
tRNA(Trp) | -1 | |
tRNA(Tyr) | -1 | |
tRNA(Val) | -1 | |
UDP | 5.2 | Uridine 5'-diphosphate |
UDP-alpha-D-galactofuranose | 0.2 | UDP-alpha-D-galacto-1,4-furanose UDP-D-galacto-1,4-furanose |
UDP-alpha-D-galactose | 1.8 | UDP-D-galactose UDP-galactose UDP-D-galactopyranose UDP-alpha-D-galactopyranose |
UDP-glucose | -3.2 | UDPglucose UDP-D-glucose Uridine diphosphate glucose UDP-alpha-D-glucose |
UDPMurNAc(oyl-L-Ala-D-gamma-Glu-L-Lys-D-Ala-D-Ala) | 1 | UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanine UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine |
UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine | 2 | UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine UDP-N-acetylglucosamine-3-O-pyruvateether UDP-N-acetylglucosamine enolpyruvate UDP-N-acetyl-3-O-(1-carboxyvinyl)-alpha-D-glucosamine |
UDP-N-acetyl-alpha-D-glucosamine | -4 | UDP-N-acetyl-D-glucosamine UDP-N-acetylglucosamine |
UDP-N-acetyl-D-mannosamine | 0 | UDP-N-acetyl-alpha-D-mannosamine |
UDP-N-acetylmuramate | -2 | UDP-N-acetyl-alpha-D-muramate UDP-N-acetylmuramic acid UDP-MurNAc |
UDP-N-acetylmuramoyl-L-alanine | 0 | UDP-N-acetyl-alpha-D-muramoyl-L-alanine |
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate | 1 | UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate |
UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-L-lysine | -1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysine |
UMP | 2.3 | Uridylic acid Uridine monophosphate Uridine 5'-monophosphate 5'Uridylic acid |
Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-isoglutaminyl-L-lysyl-D-alanyl-D-alanine | 1 | beta-D-GlcNAc-(1->4)-MurNAc-L-Ala-gamma-D-O-P-Glu-L-Lys-D-Ala-D-Ala-diphospho-ditrans,octacis-undecaprenol |
Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanine | -2 | GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol GlcNAc-(1->4)-MurNAc(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphospho-ditrans,octacis-undecaprenol |
Uracil | 1.2 | |
Uridine | 0.5 | |
Urocanate | 0.2 | Urocanic acid |
UTP | -3 | Uridine 5'-triphosphate Uridine triphosphate |
Water | -72.5 | Water |
Xanthine | 1 | |
Xanthosine 5'-phosphate | 0 | Xanthylic acid XMP (9-D-Ribosylxanthine)-5'-phosphate |
XTP | -1 | Xanthosine 5'-triphosphate |
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