This is estimated from numbers produced - numbers consumed.
This is based on data available using Enzymes produced by the bacteria. Some probiotics may have no information. Numbers are based on being present in probiotics and not CFU declared to be in the probiotic(often missing on labels). The intent is to help identify possible causes for a particular response to a probiotic.
| Compound Name | Estimate | Known As |
|---|---|---|
| (1R,6R)-6-Hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate | -0.2 | (1R,6R)-2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate SHCHC |
| (2R,3S)-3-Isopropylmalate | -3.8 | 3-Isopropylmalate 3-Carboxy-2-hydroxy-4-methylpentanoate 2-D-threo-Hydroxy-3-carboxy-isocaproate |
| (2S)-2-{[1-(R)-Carboxyethyl]amino}pentanoate | -0.2 | |
| (2S)-2-Isopropyl-3-oxosuccinate | 0 | 3-Carboxy-4-methyl-2-oxopentanoate 2-Oxo-4-methyl-3-carboxypentanoate |
| (2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate | 5.8 | (2S,4S)-4-Hydroxy-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate HTPA |
| (3R)-3-Hydroxyacyl-[acyl-carrier protein] | -2 | (R)-3-Hydroxyacyl-[acyl-carrier protein] |
| (3S)-6-Hydroxy-3-isopropenyl-heptanoate | 0.8 | 6-Hydroxy-3-isopropenylheptanoate |
| (3S)-Citryl-CoA | 0 | |
| (4S)-4,6-Dihydroxy-2,5-dioxohexanoate | 1.6 | 3-Deoxy-D-glycero-2,5-hexodiulosonate 2,5-Diketo-3-deoxy-D-gluconate |
| (4S)-4-Hydroxy-2-oxoglutarate | -1 | (S)-2-Hydroxy-4-oxopentanedioate L-4-Hydroxy-2-oxoglutarate |
| (4S,7R)-4-Isopropenyl-7-methyl-2-oxo-oxepanone | -0.8 | 4-Isopropenyl-7-methyloxepan-2-one |
| (6R)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide | -2 | (R)-NADH-hydrate (R)-NADHX |
| (6R)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide phosphate | -2 | (R)-NADPH-hydrate (R)-NADPHX |
| (6S)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide | -1 | (S)-NADH-hydrate (S)-NADHX (6S)-6-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide 6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide |
| (6S)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide phosphate | -1 | (S)-NADPH-hydrate (S)-NADPHX (6S)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide 2'-phosphate |
| (9Z)-Octadecenoic acid | 2.8 | (Z)-Octadec-9-enoic acid Oleate Oleic acid |
| (R)-10-Hydroxystearate | -2.8 | |
| (R)-2,3-Dihydroxy-3-methylbutanoate | -2 | (R)-2,3-Dihydroxy-isovalerate (R)-2,3-Dihydroxy-isovaleric acid (2R)-2,3-Dihydroxy-3-methylbutanoate |
| (R)-2-Hydroxyacid | 3 | (R)-2-Hydroxycarboxylate (R)-2-Hydroxycarboxylic acid |
| (R)-2-Hydroxyglutarate | -2.8 | (R)-Hydroxyglutarate |
| (R)-2-Methylmalate | -2 | (R)-2-Methylmalic acid (R)-Citramalate (R)-Citramalic acid (R)-alpha-Hydroxypyrotartaric acid D-Citramalate D-Citramalic acid D-alpha-Hydroxypyrotartaric acid (2R)-2-Hydroxy-2-methylbutanedioate |
| (R)-4'-Phosphopantothenoyl-L-cysteine | 0 | N-[(R)-4'-Phosphopantothenoyl]-L-cysteine |
| (R)-5-Diphosphomevalonate | 0 | |
| (R)-5-Phosphomevalonate | 0 | (R)-5-Phosphomevaloonic acid (R)-Mevalonic acid 5-phosphate |
| (R)-Lactate | -2 | D-Lactate D-Lactic acid D-2-Hydroxypropanoic acid D-2-Hydroxypropionic acid |
| (R)-Lipoate | -3 | (R)-Lipoic acid (R)-(+)-Lipoate R-(+)-Lipoic acid 1,2-Dithiolane-3R-pentanoic acid |
| (R)-Mevalonate | -2 | Mevalonic acid 3,5-Dihydroxy-3-methylvaleric acid |
| (R)-Pantoate | -2 | Pantoate Pantoic acid |
| (S)-1-Pyrroline-5-carboxylate | 3 | L-1-Pyrroline-5-carboxylate 1-Pyrroline-5-carboxylate |
| (S)-2-Acetolactate | 1 | (S)-2-Hydroxy-2-methyl-3-oxobutanoate (2S)-2-Hydroxy-2-methyl-3-oxobutanoate |
| (S)-2-Haloacid | -3 | |
| (S)-2-Hydroxyacid | -1 | (S)-2-Hydroxy acid (S)-2-Hydroxyalkanoic acid (S)-2-Hydroxycarboxylic acid (2S)-2-Hydroxycarboxylate |
| (S)-3-Hydroxy-3-methylglutaryl-CoA | 2 | Hydroxymethylglutaryl-CoA Hydroxymethylglutaroyl coenzyme A HMG-CoA 3-Hydroxy-3-methylglutaryl-CoA |
| (S)-4,5-Dihydroxypentane-2,3-dione | 3 | (4S)-4,5-Dihydroxy-2,3-pentanedione |
| (S)-Acetoin | 0 | (S)-2-Acetoin |
| (S)-Dihydroorotate | -9 | (S)-4,5-Dihydroorotate L-Dihydroorotate L-Dihydroorotic acid Dihydro-L-orotic acid |
| (S)-Lactaldehyde | 2 | L-Lactaldehyde L-2-Hydroxypropionaldehyde |
| (S)-Lactate | -3 | L-Lactate L-Lactic acid |
| (S)-Malate | -3 | L-Malate L-Apple acid L-Malic acid L-2-Hydroxybutanedioic acid Malate Malic acid |
| (S)-Methylmalonyl-CoA | 2 | (S)-Methylmalonyl-coenzyme A (2S)-Methylmalonyl-CoA D-Methylmalonyl-CoA |
| (S,S)-Butane-2,3-diol | -2 | (S,S)-2,3-Butanediol (S,S)-2,3-Butylene glycol (2S,3S)-Butane-2,3-diol |
| [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-6-N-(beta-D-Asp)-L-Lys-D-Ala-D-Ala)]n | 1 | |
| [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n | -1 | |
| [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine | 2 | S-Acetyldihydrolipoamide-E Enzyme N6-(S-acetyldihydrolipoyl)lysine |
| [Enzyme]-cysteine | 0 | |
| [Enzyme]-S-sulfanylcysteine | 0 | |
| [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala-D-Ala)]n-diphosphoundecaprenol | 0 | [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n-diphosphoundecaprenol [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala-D-Ala)]n+1-diphosphoundecaprenol [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n+1-diphosphoundecaprenol |
| [L-Glutamate:ammonia ligase (ADP-forming)] | 0 | [L-Glutamate:ammonia ligase (ADP-forming)]-L-tyrosine [Glutamine synthetase]-L-tyrosine |
| [Lipoyl-carrier protein]-L-lysine | -3 | Apoprotein |
| [Oxidized NADPH---hemoprotein reductase] | 1 | Oxidized flavoprotein |
| [Prokaryotic ubiquitin-like protein]-L-glutamine | -2 | |
| [Protein]-FMN-L-Threonine | 1 | [Protein]-flavin mononucleotide-L-threonine [Protein]-riboflavin-5'-phosphate-L-threonine |
| [Protein]-L-cysteine | -3 | Protein L-cysteine |
| [Protein]-L-threonine | -1 | |
| [Protein]-N6-[(R)-dihydrolipoyl]-L-lysine | -4 | [Lipoyl-carrier protein]-N6-[(R)-dihydrolipoyl]-L-lysine Protein N6-(dihydrolipoyl)lysine |
| [Protein]-S-sulfanyl-L-cysteine | 2 | |
| [Protein-PII] | -2 | Nitrogen regulatory protein P-II |
| [Reduced NADPH---hemoprotein reductase] | -1 | Reduced flavoprotein |
| 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate | 2 | |
| 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate | 0 | 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxylate 1-(5'-Phosphoribosyl)-5-amino-4-carboxyimidazole 5'-Phosphoribosyl-5-amino-4-imidazolecarboxylate 1-(5'-Phosphoribosyl)-4-carboxy-5-aminoimidazole 5'-Phosphoribosyl-4-carboxy-5-aminoimidazole 5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate |
| 1-(5-Phospho-D-ribosyl)-ATP | -6 | Phosphoribosyl-ATP N1-(5-Phospho-D-ribosyl)-ATP 1-(5-Phosphoribosyl)-ATP 1-(5-Phospho-beta-D-ribosyl)-ATP |
| 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole | 0 | 1-(5'-Phosphoribosyl)-4-(N-succinocarboxamide)-5-aminoimidazole 5'-Phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate SAICAR |
| 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide | 3 | 5'-Phosphoribosyl-5-amino-4-imidazolecarboxamide 5'-Phospho-ribosyl-5-amino-4-imidazole carboxamide AICAR 5-Aminoimidazole-4-carboxamide ribotide 5-Phosphoribosyl-4-carbamoyl-5-aminoimidazole 5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide 5-Amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide |
| 1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide | 6 | 5'-Phosphoribosyl-5-formamido-4-imidazolecarboxamide 5-Formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide FAICAR |
| 1,2,3-Trihydroxybenzene | 1 | Pyrogallol Pyrogallic acid 1,2,3-Benzenetriol |
| 1,2-Diacyl-3-alpha-D-glucosyl-sn-glycerol | 1 | 1,2-Diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol |
| 1,2-Diacyl-sn-glycerol | -3 | 1,2-Diacylglycerol L-1,2-Diacylglycerol |
| 1,4-Dihydroxy-2-naphthoate | -2.8 | 1,4-Dihydroxy-2-naphthoic acid |
| 10-Formyltetrahydrofolate | -1 | 10-Formyl-THF |
| 1-Acyl-sn-glycero-3-phosphocholine | -3 | 1-Acyl-sn-glycerol-3-phosphocholine alpha-Acylglycerophosphocholine 2-Lysolecithin 2-Lysophosphatidylcholine 1-Acylglycerophosphocholine |
| 1-Acyl-sn-glycerol 3-phosphate | -2 | 2-Lysophosphatidate Lysophosphatidate Lysophosphatidic acid |
| 1D-chiro-Inositol | -1 | 1,2,4/3,5,6-Cyclohexane-1,2,3,4,5,6-hexol (+)-Inositol |
| 1-Deoxy-D-xylulose 5-phosphate | 4 | |
| 1D-myo-Inositol 3-phosphate | 1.8 | D-myo-Inositol 3-phosphate myo-Inositol 3-phosphate Inositol 3-phosphate 1D-myo-Inositol 3-monophosphate D-myo-Inositol 3-monophosphate myo-Inositol 3-monophosphate Inositol 3-monophosphate 1L-myo-Inositol 1-phosphate L-myo-Inositol 1-phosphate |
| 1-Hydroxy-2-methyl-2-butenyl 4-diphosphate | -2 | (E)-4-Hydroxy-3-methyl-but-2-enyl diphosphate (E)-4-Hydroxy-3-methylbut-2-en-1-yl diphosphate |
| 1-Keto-D-chiro-inositol | 2 | 2D-2,3,5/4,6-Pentahydroxycyclohexanone |
| 1-Phosphatidyl-D-myo-inositol | -2 | 1-Phosphatidyl-1D-myo-inositol 1-Phosphatidyl-myo-inositol Phosphatidyl-1D-myo-inositol (3-Phosphatidyl)-1-D-inositol 1,2-Diacyl-sn-glycero-3-phosphoinositol Phosphatidylinositol |
| 2-(2-Carboxy-4-methylthiazol-5-yl)ethyl phosphate | -3 | 4-Methyl-5-[2-(phosphonooxy)ethyl]-1,3-thiazole-2-carboxylate cThz-P |
| 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA | 0 | 2'-(5-Triphospho-alpha-D-ribosyl)-3'-dephospho-CoA |
| 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine | 0 | 1-(5'-Phosphoribosyl)-N-formylglycinamidine 5'-Phosphoribosyl-N-formylglycinamidine 5'-Phosphoribosylformylglycinamidine 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine |
| 2,3,4,5-Tetrahydrodipicolinate | -6 | Delta1-Piperidine-2,6-dicarboxylate L-2,3,4,5-Tetrahydrodipicolinate (S)-2,3,4,5-Tetrahydropyridine-2,6-dicarboxylate |
| 2,3-Bisphospho-D-glycerate | 0 | 2,3-Diphospho-D-glycerate D-Greenwald ester DPG |
| 2',3'-Cyclic nucleotide | -1 | Nucleoside 2',3'-cyclic phosphate |
| 2,3-Dihydroxy-3-methylbutanoate | -2 | 2,3-Dihydroxy-isovalerate 2,3-Dihydroxy-isovaleric acid |
| 2,4,6/3,5-Pentahydroxycyclohexanone | -1 | scyllo-Inosose 2-Inosose |
| 2,5-Didehydro-D-gluconate | 2.8 | 2,5-Diketogluconic acid |
| 2,6-Di-O-alpha-D-mannosyl-1-phosphatidyl-1D-myo-inositol | -2 | |
| 2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate | -3 | cThz*-P |
| 2-Acetolactate | 3 | |
| 2-Aminobut-2-enoate | 0 | (2Z)-2-Aminobut-2-enoic acid 2-Ammoniobut-2-enoate |
| 2-C-Methyl-D-erythritol 2,4-cyclodiphosphate | 6 | 3-Methyl-1,2,3,4-tetrahydroxybutane-1,3-cyclic bisphosphate |
| 2-C-Methyl-D-erythritol 4-phosphate | -4 | |
| 2-Dehydro-3-deoxy-6-phospho-D-gluconate | 0 | 6-Phospho-2-dehydro-3-deoxy-D-gluconate 2-Keto-3-deoxy-6-phosphogluconate 2-Dehydro-3-deoxy-D-gluconate 6-phosphate |
| 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate | 0 | 3-Deoxy-D-arabino-hept-2-ulosonate 7-phosphate 3-Deoxy-arabino-heptulonate 7-phosphate 3-Deoxy-D-arabino-heptulosonic acid 7-phosphate DAHP 2-Dahp |
| 2-Dehydro-3-deoxy-D-galactonate | 0.2 | |
| 2-Dehydro-3-deoxy-D-gluconate | -0.8 | 2-Keto-3-deoxy-D-gluconate |
| 2-Dehydropantoate | 2 | |
| 2-Demethylmenaquinone | 2.8 | Demethylmenaquinone |
| 2-Deoxy-5-keto-D-gluconic acid | 0 | DKH 5-Dehydro-2-deoxy-D-gluconate 2-Deoxy-D-threo-hex-5-ulosonic acid |
| 2-Deoxy-5-keto-D-gluconic acid 6-phosphate | 1 | 6-Phospho-5-dehydro-2-deoxy-D-gluconate DKHP |
| 2-Deoxy-D-ribose 1-phosphate | 2 | 2-Deoxy-alpha-D-ribose 1-phosphate |
| 2-Deoxy-D-ribose 5-phosphate | -1 | |
| 2'-Deoxyinosine 5'-phosphate | 2 | dIMP |
| 2'-Deoxyribonucleoside diphosphate | -3 | 2'-Deoxyribonucleoside 5'-diphosphate |
| 2-Hydroxy-6-ketononatrienedioate | -1 | (2Z,4E,7E)-2-Hydroxy-6-oxonona-2,4,7-triene-1,9-dioate |
| 2-Hydroxy-6-oxonona-2,4-diene-1,9-dioate | -1 | (2Z,4E)-2-Hydroxy-6-oxonona-2,4-diene-1,9-dioate |
| 2-Hydroxymuconate semialdehyde | 1 | 2-Hydroxymuconic semialdehyde 2-Hydroxymuconate-6-semialdehyde |
| 2-Iminobutanoate | 0 | |
| 2-Iminopropanoate | 0 | |
| 2-Isopropylmaleate | 0 | beta-Isopropylmaleate |
| 2-Methyl-3-oxopropanoate | 0 | 3-Oxo-2-methylpropanoate Methylmalonate semialdehyde |
| 2-Methylmaleate | 2 | Citraconate Citraconic acid Methylmaleic acid |
| 2-O-(6-O-Acyl-alpha-D-mannosyl)-1-phosphatidyl-1D-myo-inositol | 2 | |
| 2-O-(6-O-Acyl-alpha-D-mannosyl)-6-O-alpha-D-mannosyl-1-phosphatidyl-1D-myo-inositol | 2 | |
| 2-O-(alpha-D-Glucopyranosyl)-3-phospho-D-glycerate | -2 | (2R)-2-(alpha-D-Glucopyranosyloxy)-3-(phosphonooxy)propanoate |
| 2-O-(alpha-D-Glucopyranosyl)-D-glycerate | 2 | (R)-2-(alpha-D-Glucopyranosyloxy)-3-hydroxypropanoate |
| 2-O-(alpha-D-Mannosyl)-1-phosphatidyl-1D-myo-inositol | 2 | |
| 2-O-(alpha-D-Mannosyl)-D-glycerate | -0.8 | alpha-Mannosylglycerate 2-O-(alpha-D-Mannopyranosyl)-D-glycerate |
| 2-Oxo acid | 1 | 2-Oxocarboxylate 2-Oxocarboxylic acid 2-Oxo carboxylate |
| 2-Oxo-2,3-dihydrofuran-5-acetate | 3 | 3-Oxoadipate enol-lactone 4,5-Dihydro-5-oxofuran-2-acetate 5-Oxo-4,5-dihydrofuran-2-acetate |
| 2-Oxo-3-hydroxy-4-phosphobutanoate | 2 | alpha-Keto-3-hydroxy-4-phosphobutyrate (3R)-3-Hydroxy-2-oxo-4-phosphonooxybutanoate (3R)-3-Hydroxy-2-oxo-4-phosphooxybutanoate |
| 2-Oxobutanoate | 2 | 2-Ketobutyric acid 2-Oxobutyric acid 2-Oxobutyrate 2-Oxobutanoic acid alpha-Ketobutyric acid alpha-Ketobutyrate |
| 2-Oxoglutaramate | 3 | 2-Oxoglutaramic acid alpha-Ketoglutaramate 2-Ketoglutaramate |
| 2-Oxoglutarate | -3.6 | Oxoglutaric acid 2-Ketoglutaric acid alpha-Ketoglutaric acid |
| 2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol | 1 | |
| 2-Phospho-D-glycerate | -6 | D-Glycerate 2-phosphate 2-Phospho-(R)-glycerate |
| 2-Phosphoglycolate | -3 | Phosphoglycolic acid |
| 2-Succinylbenzoate | 0.2 | o-Succinylbenzoate Succinylbenzoate |
| 3-(4-Hydroxyphenyl)pyruvate | 2 | 4-Hydroxyphenylpyruvate p-Hydroxyphenylpyruvic acid |
| 3-(Imidazol-4-yl)-2-oxopropyl phosphate | 6 | Imidazole-acetol phosphate |
| 3',5'-Cyclic diGMP | 0.8 | cdiGMP 3',5'-Cyclic diguanylic acid Bis-(3',5')-cyclic diGMP Cyclic di-3',5'-guanylate |
| 3-Cresol | 1 | m-Cresol 3-Hydroxytoluene 3-Methylphenol |
| 3D-3,5/4-Trihydroxycyclohexane-1,2-dione | 0 | D-2,3-Diketo-4-deoxy-epi-inositol (3R,4S,5R)-3,4,5-Trihydroxy-1,2-cyclohexanedione 3,5/4-Trihydroxycyclohexa-1,2-dione |
| 3-Dehydro-L-gulonate 6-phosphate | -1 | |
| 3-Dehydroquinate | 0 | 3-Dehydroquinic acid 5-Dehydroquinate 5-Dehydroquinic acid |
| 3-Dehydroshikimate | 4.2 | |
| 3-D-Glucosyl-1,2-diacylglycerol | 2 | 1,2-Diacyl-3-beta-D-glucosyl-sn-glycerol Monoglucosyldiglyceride Monoglucosyldiacylglycerol Glcbeta1->3acyl2Gro 1,2-Diacyl-3-O-(beta-D-glucopyranosyl)-sn-glycerol |
| 3-Hydroxy-2-methylpropanoate | -1 | 3-Hydroxyisobutyrate 3-Hydroxyisobutyric acid |
| 3-Methyl-2-oxobutanoic acid | 2 | 3-Methyl-2-oxobutyric acid 3-Methyl-2-oxobutanoate 2-Oxo-3-methylbutanoate 2-Oxoisovalerate 2-Oxoisopentanoate alpha-Ketovaline 2-Ketovaline 2-Keto-3-methylbutyric acid |
| 3-O-(alpha-D-Mannosyl)-L-threonyl-[protein] | 2 | [Protein]-3-O-(alpha-D-mannosyl)-L-threonine O-D-Mannosylprotein |
| 3-O-L-Lysyl-1-O-phosphatidylglycerol | 1 | |
| 3-Oxoacyl-[acyl-carrier protein] | 1 | |
| 3-Oxopropanoate | 0 | Malonate semialdehyde |
| 3-Phospho-D-glycerate | -2.8 | D-Glycerate 3-phosphate 3-Phospho-(R)-glycerate 3-Phosphoglycerate |
| 3-Phospho-D-glyceroyl phosphate | 6 | 1,3-Bisphospho-D-glycerate (R)-2-Hydroxy-3-(phosphonooxy)-1-monoanhydride with phosphoric propanoic acid D-Glycerate 1,3-diphosphate |
| 3-Phosphonooxypyruvate | 4.8 | 3-Phosphonooxypyruvic acid 3-Phosphohydroxypyruvate 3-Phosphohydroxypyruvic acid 3-Phosphooxypyruvate |
| 3'-Ribonucleotide | -1 | 3'-Phosphomononucleotides 3'-Nucleoside monophosphate |
| 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol | -1 | |
| 4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine | 0 | (4-Amino-2-methylpyrimidin-5-yl)methyl phosphate 4-Amino-5-hydroxymethyl-2-methylpyrimidine phosphate HMP-P |
| 4-Amino-4-deoxychorismate | 2 | ADC |
| 4-Amino-5-aminomethyl-2-methylpyrimidine | -3 | Amino-HMP |
| 4-Amino-5-hydroxymethyl-2-methylpyrimidine | 0 | Toxopyrimidine 4-Amino-2-methyl-5-pyrimidinemethanol HMP |
| 4-Amino-5-hydroxymethyl-2-methylpyrimidine diphosphate | 0 | 4-Amino-2-methyl-5-(diphosphooxymethyl)pyrimidine HMP-PP |
| 4-Methyl-2-oxopentanoate | 4.8 | 2-Oxoisocaproate |
| 4-Methyl-5-(2-phosphooxyethyl)thiazole | -0.2 | 4-Methyl-5-(2-phosphonooxyethyl)thiazole 5-(2-Hydroxyethyl)-4-methylthiazole phosphate HET-P |
| 4-Methylthio-2-oxobutanoic acid | -3 | 4-Methylthio-2-oxobutanoate 4-(Methylsulfanyl)-2-oxobutanoate 2-Keto-4-methylthiobutyric acid 2-Oxo-4-methylthiobutanoate 2-Oxo-4-methylthiobutanoic acid |
| 4-Nitrophenol | 1 | p-Nitrophenol PNP Niphen 4-Hydroxynitrobenzene |
| 4-Nitrophenyl phosphate | -1 | |
| 4-O-{Poly[(2R)-2-alpha-D-glucosyl-1-glycerophospho]-(2R)-glycerophospho}-N-acetyl-beta-D-mannosaminyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol | 1 | [(2-Glc)-Gro-P]n-Gro-P-ManNAc-GlcNAc-PP-undecaprenol |
| 4-O-{Poly[(2R)-glycerophospho]-(2R)-glycerophospho}-N-acetyl-beta-D-mannosaminyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol | -1 | |
| 4-Phospho-L-aspartate | 6 | L-4-Aspartyl phosphate |
| 5-(2-Hydroxyethyl)-4-methylthiazole | 0.2 | 4-Methyl-5-(2'-hydroxyethyl)-thiazole 4-Methyl-5-(2-hydroxyethyl)thiazole HET |
| 5-(5-Phospho-D-ribosylaminoformimino)-1-(5-phosphoribosyl)-imidazole-4-carboxamide | 0 | N-(5'-Phospho-D-ribosylformimino)-5-amino-1-(5''-phospho-D-ribosyl)-4-imidazolecarboxamide N-(5'-Phosphoribosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide Phosphoribosyl-formimino-AICAR-phosphate 1-(5-Phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide 1-(5-Phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide |
| 5,10-Methenyltetrahydrofolate | 2.8 | |
| 5,10-Methylenetetrahydrofolate | -5 | (6R)-5,10-Methylenetetrahydrofolate 5,10-Methylene-THF |
| 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole | 0 | |
| 5-Dehydro-4-deoxy-D-glucuronate | 0 | 4-Deoxy-L-threo-5-hexosulose uronate |
| 5'-Deoxyadenosine | 2 | |
| 5-Deoxy-D-glucuronate | 0 | 5-Deoxy-D-glucuronic acid 5-Deoxy-D-xylo-hexuronic acid |
| 5-Deoxy-D-ribose | 3 | |
| 5-Methyltetrahydrofolate | -3 | |
| 5-Methyltetrahydropteroyltri-L-glutamate | -3 | |
| 5'-Methylthioadenosine | -4 | Methylthioadenosine S-Methyl-5'-thioadenosine 5-Methylthioadenosine 5'-Deoxy-5'-(methylthio)adenosine Thiomethyladenosine MTA 5'-Deoxy-5'-(methylsulfanyl)adenosine |
| 5-Methylthio-D-ribose | 3 | S-Methyl-5-thio-D-ribose 5-(Methylsulfanyl)-D-ribose |
| 5-O-(1-Carboxyvinyl)-3-phosphoshikimate | 0 | O5-(1-Carboxyvinyl)-3-phosphoshikimate |
| 5'-O-Phosphonoadenylyl-(3'->5')-adenosine | 1 | pApA |
| 5-Oxo-D-proline | 2 | D-Pyroglutamic acid D-5-Pyrrolidone-2-carboxylic acid |
| 5-Oxopentanoate | -1 | Glutarate semialdehyde |
| 5-Phospho-alpha-D-ribose 1-diphosphate | 23.8 | 5-Phosphoribosyl diphosphate 5-Phosphoribosyl 1-pyrophosphate PRPP |
| 5-Phosphoribosylamine | -6 | 5-Phospho-beta-D-ribosylamine 5-Phospho-D-ribosylamine 5-Phosphoribosyl-1-amine |
| 5'-Phosphoribosylglycinamide | 0 | GAR N1-(5-Phospho-D-ribosyl)glycinamide Glycinamide ribonucleotide N1-(5-Phospho-beta-D-ribosyl)glycinamide |
| 5'-Phosphoribosyl-N-formylglycinamide | 0 | N-Formyl-GAR N-Formylglycinamide ribonucleotide N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide N2-Formyl-N1-(5-phospho-beta-D-ribosyl)glycinamide |
| 5'-Ribonucleotide | -2 | |
| 5'-S-Methyl-5'-thioinosine | 1 | 5'-Deoxy-5'-methylthioinosine S-Methyl-5'-thioinosine |
| 6-(Hydroxymethyl)-7,8-dihydropterin | 0 | 6-Hydroxymethyl-7,8-dihydropterin 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine |
| 6-Acetyl-beta-D-galactoside | 3 | |
| 6-Deoxy-L-galactose | 1 | L-Fucose |
| 6-Hydroxy-3,7-dimethyloctanoate | 0.8 | |
| 6-Hydroxymethyl-7,8-dihydropterin diphosphate | 2 | (7,8-Dihydropterin-6-yl)methyl diphosphate 2-Amino-7,8-dihydro-4-hydroxy-6-(diphosphooxymethyl)pteridine 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate 7,8-Dihydropterin pyrophosphate |
| 6-Methylsalicylate | -1 | 6-Methylsalicylic acid 2-Hydroxy-6-methylbenzoic acid 6-Methyl-2-hydroxybenzenecarboxylate |
| 6-Phospho-beta-D-galactoside | -1 | |
| 6-Phospho-beta-D-glucosyl-(1,4)-D-glucose | 0 | Cellobiose 6'-phosphate Cellobiose 6-phosphate |
| 6-Phospho-D-gluconate | -2.2 | |
| 7,8-Dihydroneopterin | -2 | Dihydroneopterin 2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine |
| 7-Aminomethyl-7-carbaguanine | -3 | 7-Aminomethyl-7-deazaguanine |
| 7-Isopropyl-4-methyloxepan-2-one | -0.8 | |
| 8-Oxo-dGDP | 0 | 8-Oxo-7,8-dihydro-2'-deoxyguanosine 5'-diphosphate |
| 8-Oxo-dGMP | 5 | 2'-Deoxy-7,8-dihydro-8-oxo-5'-guanylate 8-Hydroxydeoxyguanosine 5'-monophosphate |
| 8-Oxo-dGTP | -5 | 8-Oxodeoxyguanosine triphosphate 8-Oxo-7,8-dihydro-2'-deoxyguanosine 5'-triphosphate |
| 8-Oxo-GDP | 0 | 8-Oxoguanosine 5'-diphosphate |
| 8-Oxo-GMP | 2 | 8-Oxoguanosine 5'-phosphate |
| 8-Oxo-GTP | -2 | 8-Oxoguanosine triphosphate |
| Acceptor | 3 | Hydrogen-acceptor A Oxidized donor |
| Acetaldehyde | 0 | Ethanal |
| Acetate | 7 | Acetic acid Ethanoic acid |
| Acetoacetate | -0.2 | 3-Oxobutanoic acid beta-Ketobutyric acid Acetoacetic acid |
| Acetoacetyl-[acp] | 1 | Acetoacetyl-[acyl-carrier protein] |
| Acetoacetyl-CoA | 0 | Acetoacetyl coenzyme A 3-Acetoacetyl-CoA |
| Acetone | 0.2 | Dimethyl ketone 2-Propanone |
| Acetyl phosphate | 13 | |
| Acetyl-[citrate (pro-3S)-lyase] | 1 | |
| Acetyl-CoA | -36.7 | Acetyl coenzyme A |
| Acetyl-maltose | 1.8 | 6-O-Acetyl-alpha-D-glucopyranosyl-(1->4)-D-glucose |
| Acyl phosphate | 1 | Fatty acyl phosphate |
| Acyl-[acyl-carrier protein] | -2 | |
| Acyl-carrier protein | 4 | ACP [Acyl-carrier protein] Holo-[acyl-carrier protein] |
| Acyl-CoA | -3 | Acyl coenzyme A |
| Adenine | 6.2 | 6-Aminopurine |
| Adenosine | -1 | |
| Adenosine 3',5'-bisphosphate | 2 | PAP 3'-Phosphoadenylate Phosphoadenosine phosphate |
| Adenosyl cobyrinate a,c diamide | 1 | Adenosyl cobyrinate diamide Adenosylcob(III)yrinic acid a,c-diamide Adenosylcobyrinic acid a,c-diamide |
| Adenylyl-[L-glutamate:ammonia ligase (ADP-forming)] | 0 | [L-Glutamate:ammonia ligase (ADP-forming)] inactive form [L-Glutamate:ammonia ligase (ADP-forming)]-O4-(5'-adenylyl)-L-tyrosine [Glutamine synthetase]-O4-(5'-adenylyl)-L-tyrosine |
| ADP | 219.2 | Adenosine 5'-diphosphate |
| ADP-glucose | 0 | ADP-alpha-D-glucose Adenosine diphosphoglucose |
| ADP-ribose | -3 | ADP-D-ribose Adenosine diphosphate ribose |
| Alcohol | 4.8 | |
| Aldehyde | 3 | RCHO |
| Alkane-alpha,omega-diamine | -2 | |
| all-trans-Polyprenyl diphosphate | -2.8 | Polyisopentenylpyrophosphate Polyisopentenyldiphosphate trans-Polyisopentenyldiphosphate Polyprenyl diphosphate |
| alpha,alpha'-Trehalose 6-phosphate | -1 | Trehalose 6-phosphate |
| alpha-D-Galactose | -3 | |
| alpha-D-Galactose 1-phosphate | 0 | alpha-D-Galactopyranose 1-phosphate |
| alpha-D-Glucosamine 1-phosphate | -5.8 | D-Glucosamine 1-phosphate |
| alpha-D-Glucose | -3 | |
| alpha-D-Glucose 6-phosphate | -3 | |
| alpha-D-Ribose 1-phosphate | 1.8 | Ribose 1-phosphate D-Ribose 1-phosphate |
| alpha-Isopropylmalate | 4 | (2S)-2-Isopropylmalate (2S)-2-Hydroxy-2-isopropylsuccinic acid 2-Isopropylmalic acid 3-Carboxy-3-hydroxy-4-methylpentanoate 3-Carboxy-3-hydroxyisocaproate |
| alpha-L-Fucopyranose | -0.2 | alpha-L-Fucose |
| alpha-L-Fucoside | -1 | |
| alpha-L-Rhamnopyranosyl-(1->3)-N-acetyl-alpha-D-glucosaminyl-diphospho-trans,octacis-decaprenol | -2 | |
| alpha-L-Rhamnose | -1 | alpha-6-Deoxy-L-mannose alpha-L-Mannomethylose alpha-L-Rhamnopyranose |
| alpha-Maltose 1-phosphate | -2 | |
| Aminoimidazole ribotide | 0 | AIR 1-(5'-Phosphoribosyl)-5-aminoimidazole 5'-Phosphoribosyl-5-aminoimidazole 1-(5-Phospho-D-ribosyl)-5-aminoimidazole 5-Amino-1-(5-phospho-D-ribosyl)imidazole 5-Amino-1-(5-phospho-beta-D-ribosyl)imidazole |
| Ammonia | 34.6 | NH3 |
| AMP | 107.8 | Adenosine 5'-monophosphate Adenylic acid Adenylate 5'-AMP 5'-Adenylic acid 5'-Adenosine monophosphate Adenosine 5'-phosphate |
| Anthranilate | 5 | Anthranilic acid o-Aminobenzoic acid Vitamin L1 2-Aminobenzoate |
| Apo-[carboxylase] | -3 | [Biotin carboxyl-carrier protein]-L-lysine |
| Aromatic aldehyde | 1 | |
| Aromatic primary alcohol | -1 | Aromatic alcohol |
| Arsenate ion | -1 | Arsenate |
| Arsenite | 1 | Trisoxylatoarsine |
| Ascorbate | -1 | Ascorbic acid L-Ascorbate L-Ascorbic acid Vitamin C |
| ATP | -334 | Adenosine 5'-triphosphate |
| beta-D-Fructose 6-phosphate | 2 | beta-D-Fructofuranose 6-phosphate |
| beta-D-Galactoside | -3 | |
| beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-O-P-Glu-L-Lys-D-Ala-D-Ala)-diphospho-ditrans,octacis-undecaprenol | -3 | |
| beta-D-Glucose | 3 | beta-D-Glucopyranose |
| beta-D-Glucose 1-phosphate | 0 | |
| beta-D-Glucose 6-phosphate | 1 | |
| beta-D-Glucuronoside | -1 | O-beta-D-Glucuronoside Glucuronide beta-D-Glucuronide |
| beta-D-Ribofuranose | 0.8 | |
| beta-D-Ribopyranose | -0.8 | Ribose |
| beta-Lactam | -1 | |
| beta-L-Arabinofuranose | 2 | |
| beta-L-Arabinofuranosyl-(1->2)-beta-L-arabinofuranose | -2 | |
| beta-L-Fucopyranose | 0.2 | beta-L-Fucose |
| beta-L-Rhamnose | 1 | beta-6-Deoxy-L-mannose beta-L-Mannomethylose beta-L-Rhamnopyranose |
| Biotin | -3 | D-Biotin Vitamin H Coenzyme R |
| Biotinyl-[protein] | 1 | Biotin protein of malonate decarboxylase |
| Carbamate | 0 | Carbamic acid Aminoformic acid |
| Carbamoyl phosphate | -2 | |
| Carbonic acid | -3 | Dihydrogen carbonate H2CO3 |
| Carboxybiotin-carboxyl-carrier protein | 0.5 | [Biotin carboxyl-carrier protein]-carboxybiotin-N6-L-lysine [Biotin carboxyl-carrier protein]-N6-carboxybiotinyl-L-lysine |
| Carboxybiotinyl-[protein] | -1 | |
| Carboxylate | 5.8 | R-COOH Monocarboxylate Carboxylic acid |
| Carboxyphosphate | 0 | |
| Cardiolipin | 2 | Diphosphatidylglycerol 1',3'-Bis(1,2-diacyl-sn-glycero-3-phospho)-sn-glycerol |
| Catechol | -1 | 1,2-Benzenediol o-Benzenediol 1,2-Dihydroxybenzene Brenzcatechin Pyrocatechol |
| CDP-diacylglycerol | -2 | CDP-1,2-diacylglycerol 1,2-Diacyl-sn-glycero-3-cytidine-5'-diphosphate |
| Cellobiose | -1 | 1-beta-D-Glucopyranosyl-4-D-glucopyranose |
| Chitobiose | -1 | Diacetylchitobiose N,N'-Diacetylchitobiose |
| Cholic acid | 2 | Cholate 3alpha,7alpha,12alpha-Trihydroxy-5beta-cholanate 3alpha,7alpha,12alpha-Trihydroxy-5beta-cholanic acid |
| Chorismate | -5 | Chorismic acid (3R,4R)-3-[(1-Carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylate |
| cis-Aconitate | 0 | cis-Aconitic acid |
| Citrate | -1 | Citric acid 2-Hydroxy-1,2,3-propanetricarboxylic acid 2-Hydroxytricarballylic acid |
| CMP | 9 | Cytidine-5'-monophosphate Cytidylic acid |
| CO2 | 59.8 | Carbon dioxide |
| CoA | 38.3 | Coenzyme A CoA-SH |
| Cob(II)alamin | -1 | Vitamin B12r |
| Cob(II)yrinate a,c diamide | -1 | Cob(II)yrinate diamide Cob(II)yrinic acid a,c-diamide Cobyrinate a,c-diamide Cobyrinic acid a,c-diamide |
| Cobamide coenzyme | 1 | Adenosylcobalamin Adenosylcob(III)alamin Deoxyadenosylcobalamin Cobamamide Vitamin B12 coenzyme 5,6-Dimethylbenzimidazolyl-5-deoxyadenosyl-cobamide (5'-Deoxy-5'-adenosyl)cobamide coenzyme (5,6-Dimethylbenzimidazolyl)cobamide coenzyme alpha-(5,6-Dimethylbenzimidazolyl)cobamide coenzyme 5'-Deoxy-5'-adenosylcobalamin 5'-Deoxy-5'-adenosyl vitamin B12 5'-Deoxy-5'-adenosyl-5,6-dimethylbenzimidazolylcobamide 5,6-Dimethylbenzimidazolyl-Co-5'-deoxy-5'-adenosylcobamide Calomide Cobalamin coenzyme Coenzyme B12 DMBC coenzyme Dibencozide Funacomide |
| Coenzyme F420 | 1 | Oxidized coenzyme F420 Coenzyme gamma-F420-2 |
| Coproporphyrin III | 1 | |
| CTP | -4 | Cytidine 5'-triphosphate Cytidine triphosphate |
| Cyclic di-3',5'-adenylate | 0 | Cyclic di-AMP |
| Cyclomaltodextrin | -1 | Cyclodextrin |
| Cys-Gly | 1.6 | L-Cysteinylglycine |
| Cytidine | -3 | |
| Cytosine | 1 | |
| D-4'-Phosphopantothenate | 2 | (R)-4'-Phosphopantothenate |
| D-Alanine | 0 | D-2-Aminopropionic acid D-Ala |
| D-Alanyl-D-alanine | 0 | D-Ala-D-Ala |
| D-Amino acid | 3 | |
| D-arabino-Hex-3-ulose 6-phosphate | -0.2 | D-arabino-3-Hexulose 6-phosphate D-arabino-6-Phospho-hex-3-ulose |
| D-Arabinose | -0.2 | D-Arabinopyranose |
| D-Arabinose 5-phosphate | -0.8 | |
| D-Aspartate | 0 | D-Aspartic acid |
| dCDP | 1 | 2'-Deoxycytidine diphosphate 2'-Deoxycytidine 5'-diphosphate |
| dCMP | -2 | Deoxycytidylic acid Deoxycytidine monophosphate Deoxycytidylate 2'-Deoxycytidine 5'-monophosphate |
| dCTP | -2 | Deoxycytidine 5'-triphosphate Deoxycytidine triphosphate 2'-Deoxycytidine 5'-triphosphate |
| Deamino-NAD+ | 0 | Deamido-NAD+ Deamido-NAD Nicotinic acid adenine dinucleotide |
| Decaprenol phosphate | -2 | mono-trans, poly-cis-Decaprenyl phosphate trans,octacis-Decaprenyl phosphate |
| Dehydroalanine | 0 | 2-Aminoacrylate 2-Aminoprop-2-enoate |
| Deoxyadenosine | -1 | 2'-Deoxyadenosine |
| Deoxycytidine | -1 | 2'-Deoxycytidine |
| Deoxyinosine | 1 | 2'-Deoxyinosine |
| Deoxynucleoside triphosphate | -1 | 2'-Deoxyribonucleoside 5'-triphosphate 2'-Deoxyribonucleoside triphosphate |
| Deoxyuridine | 0 | 2-Deoxyuridine 2'-Deoxyuridine |
| Dephospho-CoA | -1 | Dephosphocoenzyme A 3'-Dephospho-CoA |
| D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate | 0 | D-erythro-Imidazole-glycerol 3-phosphate D-erythro-Imidazole-glycerol phosphate |
| D-Erythrose 4-phosphate | 3.2 | |
| D-Fructose | -1.2 | Levulose Fruit sugar D-arabino-Hexulose |
| D-Fructose 1,6-bisphosphate | -3 | |
| D-Fructose 1-phosphate | 0 | |
| D-Fructose 6-phosphate | 5.6 | D-Fructose 6-phosphoric acid Neuberg ester |
| D-Fructuronate | 2 | D-Fructuronic acid |
| D-Galactonate | -0.2 | D-Galactonic acid |
| D-Galactose | -0.6 | D-Galactopyranose |
| D-Galactose 6-phosphate | 0.8 | 6-Phospho-D-galactose |
| D-Gluconic acid | -1 | D-Gluconate D-gluco-Hexonic acid |
| D-Glucono-1,5-lactone | 1 | Gluconic lactone Gluconic acid lactone 1,5-Gluconolactone delta-Gluconolactone D-Gluconolactone Gluconolactone |
| D-Glucono-1,5-lactone 6-phosphate | 3.2 | 6-Phospho-D-glucono-1,5-lactone |
| D-Glucosamine 6-phosphate | 7 | D-Glucosamine phosphate |
| D-Glucose | 2 | Grape sugar Dextrose Glucose D-Glucopyranose |
| D-Glucose 1-phosphate | -3.8 | alpha-D-Glucose 1-phosphate Cori ester D-Glucose alpha-1-phosphate |
| D-Glucose 6-phosphate | 2 | Glucose 6-phosphate Robison ester |
| D-Glucuronate | 0 | Glucuronic acid Glucuronate |
| D-Glutamate | -3 | D-Glutamic acid D-Glutaminic acid D-2-Aminoglutaric acid |
| D-Glyceraldehyde 3-phosphate | -2.4 | (2R)-2-Hydroxy-3-(phosphonooxy)-propanal Glyceraldehyde 3-phosphate |
| D-Glycerate | 0.2 | Glycerate (R)-Glycerate Glyceric acid |
| Diacetyl | 2 | Biacetyl Dimethylglyoxal 2,3-Butanedione |
| Dicarboxylate | 1 | Dicarboxylic acid |
| Dihydroflavodoxin | -3 | |
| Dihydrofolate | 9 | Dihydrofolic acid 7,8-Dihydrofolate 7,8-Dihydrofolic acid 7,8-Dihydropteroylglutamate |
| Dihydropteroate | -3 | 7,8-Dihydropteroate |
| Dimethylallyl diphosphate | -7 | 2-Isopentenyl diphosphate Delta2-Isopentenyl diphosphate Dimethylallyl pyrophosphate DMAPP Monoprenyl diphosphate Prenyl diphosphate |
| Diphosphate | 144.2 | Diphosphoric acid Pyrophosphate Pyrophosphoric acid PPi |
| dITP | -2 | 2'-Deoxyinosine-5'-triphosphate 2'-Deoxyinosine 5'-triphosphate |
| di-trans,poly-cis-Undecaprenyl diphosphate | 1 | Undecaprenyl diphosphate Bactoprenyl diphosphate ditrans,octacis-Undecaprenyl diphosphate |
| di-trans,poly-cis-Undecaprenyl phosphate | -1 | Undecaprenyl phosphate ditrans,octacis-Undecaprenyl phosphate |
| DL-Glycerol 1-phosphate | -2 | Glycerol 1-phosphate Glycerol-3-phosphate rac-Glycerol 1-phosphate DL-Glyceryl 1-phosphate DL-Glycerol 3-phosphate |
| D-Lyxose | -0.8 | |
| D-Mannitol 1-phosphate | 0 | |
| D-Mannonate | -2 | |
| D-Mannose | -0.2 | Mannose Seminose Carubinose D-Mannopyranose |
| D-Mannose 1-phosphate | -2 | alpha-D-Mannose 1-phosphate |
| D-Mannose 6-phosphate | -2 | |
| DNA | 3 | DNAn DNAn+1 (Deoxyribonucleotide)n (Deoxyribonucleotide)m (Deoxyribonucleotide)n+m Deoxyribonucleic acid |
| DNA 5-methylcytosine | 2.6 | DNA containing 5-methylcytosine 5-Methylcytosine (in DNA) |
| DNA 6-methylaminopurine | 1 | N6-Methyladenine in DNA |
| DNA adenine | -1 | Adenine in DNA |
| DNA containing 6-O-methylguanine | -2 | |
| Dolichyl phosphate | 0.2 | Dolichol phosphate |
| Dolichyl phosphate D-mannose | -0.2 | Dolichyl D-mannosyl phosphate Dolichyl beta-D-mannosyl phosphate |
| D-Ribose | -1 | |
| D-Ribose 5-phosphate | 1.2 | Ribose 5-phosphate |
| D-Ribulose | 0.2 | D-erythro-2-Pentulose D-Arabinoketose D-Arabinulose D-Riboketose |
| D-Ribulose 5-phosphate | 6.8 | |
| D-Serine | 1.8 | |
| D-Sorbitol | -1 | D-Glucitol L-Gulitol Sorbitol |
| D-Tagatose 1,6-bisphosphate | 0 | |
| D-Tagatose 6-phosphate | 0 | |
| dTDP | 3 | Deoxythymidine 5'-diphosphate |
| dTDP-4-dehydro-beta-L-rhamnose | 5.8 | dTDP-4-dehydro-6-deoxy-beta-L-mannose dTDP-4-oxo-6-deoxy-L-mannose dTDP-4-oxo-L-rhamnose |
| dTDP-4-oxo-6-deoxy-D-glucose | -0.2 | dTDP-4-dehydro-6-deoxy-D-glucose dTDP-4-dehydro-6-deoxy-alpha-D-glucose dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose dTDP-4-oxo-6-deoxy-alpha-D-glucose dTDP-4-dehydro-6-deoxy-alpha-D-galactose dTDP-4-dehydro-6-deoxy-D-galactose dTDP-6-deoxy-D-xylo-hexos-4-ulose dTDP-6-deoxy-D-xylo-4-hexulose 4,6-Dideoxy-4-oxo-dTDP-D-glucose |
| dTDP-glucose | 0 | dTDP-D-glucose dTDP-alpha-D-glucose |
| dTDP-L-rhamnose | -2.8 | dTDP-6-deoxy-L-mannose dTDP-6-deoxy-beta-L-mannose dTDP-beta-L-rhamnose |
| dTMP | 1 | Thymidine 5'-phosphate Deoxythymidine 5'-phosphate Thymidylic acid 5'-Thymidylic acid Thymidine monophosphate Deoxythymidylic acid Thymidylate |
| dTTP | -2.8 | Deoxythymidine triphosphate Deoxythymidine 5'-triphosphate TTP |
| dUMP | 1 | Deoxyuridylic acid Deoxyuridine monophosphate Deoxyuridine 5'-phosphate 2'-Deoxyuridine 5'-phosphate |
| dUTP | -1 | 2'-Deoxyuridine 5'-triphosphate |
| D-Xylulose | -0.2 | D-threo-Pentulose D-Lyxulose |
| D-Xylulose 5-phosphate | 8.2 | |
| e- | 0 | Electron |
| Enzyme N6-(dihydrolipoyl)lysine | -1 | Dihydrolipoamide-E [E2 protein]-N6-[(R)-dihydrolipoyl]-L-lysine [Lipoyl-carrier protein E2]-N6-[(R)-dihydrolipoyl]-L-lysine |
| Enzyme N6-(lipoyl)lysine | -1 | Lipoamide-E [E2 protein]-N6-lipoyl-L-lysine [Lipoyl-carrier protein E2]-N6-lipoyl-L-lysine |
| Ester | -0.8 | Carboxylic ester |
| FAD | 2 | Flavin adenine dinucleotide |
| Fatty acid | -1 | |
| Fe2+ | 2 | Fe(II) Ferrous ion Iron(2+) |
| Fe-coproporphyrin III | -1 | Coproheme III |
| Flavodoxin semiquinone | 3 | |
| FMN | 2.5 | Riboflavin-5-phosphate Flavin mononucleotide |
| Folinic acid | -2.8 | Leucovorin 5-Formyltetrahydrofolate L(-)-5-Formyl-5,6,7,8-tetrahydrofolic acid |
| Formate | -5.8 | Methanoic acid Formic acid |
| Formyl-CoA | 0 | |
| Formyl-L-methionyl peptide | -3 | |
| Fructoselysine | -1 | N6-(D-Fructosyl)-L-lysine |
| Fumarate | 14.6 | Fumaric acid trans-Butenedioic acid |
| Galactitol | -1 | Dulcitol Dulcose |
| Galactitol 1-phosphate | 1 | L-Galactitol 1-phosphate D-Galactitol 6-phosphate |
| Galactosylceramide | -0.2 | Galactocerebroside Cerebroside D-Galactosyl-N-acylsphingosine D-Galactosylceramide |
| Gallate | -1 | Gallic acid 3,4,5-Trihydroxybenzoic acid 3,4,5-Trihydroxybenzoate Pyrogallol-5-carboxylic acid |
| gamma-L-Glutamyl-L-cysteine | 3 | L-gamma-Glutamylcysteine 5-L-Glutamyl-L-cysteine gamma-Glutamylcysteine |
| gamma-L-Glutamyl-S-(hercyn-2-yl)-L-cysteine S-oxide | -2 | |
| GDP | 15.8 | Guanosine 5'-diphosphate Guanosine diphosphate |
| GDP-mannose | -1.8 | GDP-D-mannose GDP-alpha-D-mannose |
| Geranyl diphosphate | 0 | |
| Geranylgeranyl diphosphate | 3 | Geranylgeranyl pyrophosphate all-trans-Geranylgeranyl diphosphate all-trans-Geranylgeranyl pyrophosphate (2E,6E,10E)-3,7,11,15-Tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate |
| Glucosylceramide | -2.8 | Glucocerebroside beta-D-Glucosyl-(1<->1)-ceramide D-Glucosyl-N-acylsphingosine |
| Glutaminyl-tRNA | 3 | L-Glutaminyl-tRNA(Gln) Glutaminyl-tRNA(Gln) Gln-tRNA(Gln) |
| Glutarate | 1 | Glutaric acid Pentanedioic acid 1,3-Propanedicarboxylic acid |
| Glutathione | -2 | 5-L-Glutamyl-L-cysteinylglycine N-(N-gamma-L-Glutamyl-L-cysteinyl)glycine gamma-L-Glutamyl-L-cysteinyl-glycine GSH Reduced glutathione |
| Glutathione disulfide | 2 | GSSG Oxiglutatione Oxidized glutathione |
| Glycerol | 1 | Glycerin 1,2,3-Trihydroxypropane 1,2,3-Propanetriol |
| Glycerone | -1 | Dihydroxyacetone 1,3-Dihydroxyacetone 1,3-Dihydroxy-2-propanone 1,3-Dihydroxypropan-2-one |
| Glycerone phosphate | 14.8 | Dihydroxyacetone phosphate 3-Hydroxy-2-oxopropyl phosphate |
| Glycerophosphodiester | -1 | |
| Glycine | 2 | Aminoacetic acid Gly |
| Glycocholate | -2 | Glycocholic acid 3alpha,7alpha,12alpha-Trihydroxy-5beta-cholan-24-oylglycine |
| Glycolaldehyde | 2 | Hydroxyacetaldehyde |
| Glycolate | 3 | Glycolic acid Hydroxyacetic acid |
| Glycyl-tRNA(Gly) | 3 | |
| Glyoxylate | 1 | Glyoxalate Glyoxylic acid |
| GMP | 1 | Guanosine 5'-phosphate Guanosine monophosphate Guanosine 5'-monophosphate Guanylic acid |
| GTP | -11.8 | Guanosine 5'-triphosphate |
| Guanine | 2 | 2-Amino-6-hydroxypurine |
| Guanosine 3',5'-bis(diphosphate) | 0 | Guanosine 3'-diphosphate 5'-diphosphate Guanosine 5'-diphosphate,3'-diphosphate |
| Guanosine 3'-diphosphate 5'-triphosphate | 3 | Guanosine 5'-triphosphate,3'-diphosphate |
| H+ | 120.2 | Hydron |
| Halide | 3 | Hydrogen halide HX Halo acid |
| HCO3- | -15 | Hydrogencarbonate Bicarbonate Hydrogen carbonate Acid carbonate |
| Heme | -1 | Haem Protoheme Heme B Protoheme IX |
| Hexadecanoic acid | 1 | Hexadecanoate Hexadecylic acid Palmitic acid Palmitate Cetylic acid |
| Holo-[carboxylase] | 2.5 | Biotin-carboxyl-carrier protein [Biotin carboxyl-carrier protein]-biotin-N6-L-lysine [Biotin carboxyl-carrier protein]-N6-biotinyl-L-lysine |
| Holo-[citrate (pro-3S)-lyase] | 0 | |
| Hydrogen peroxide | 2 | H2O2 Oxydol |
| Hydrogen selenide | 3 | Selenide |
| Hydrogen sulfide | -1 | Hydrogen-sulfide H2S Sulfide |
| Hydroquinone | -1 | p-Benzenediol 1,4-Benzenediol 1,4-Dihydroxybenzene Benzene-1,4-diol Quinol 4-Hydroxyphenol |
| Hydroquinone | 7.6 | p-Hydroquinone Quinol Reduced quinone |
| Hydroxypyruvate | 0.6 | Hydroxypyruvic acid 3-Hydroxypyruvate 3-Hydroxypyruvic acid |
| Hypoxanthine | 4.8 | Purine-6-ol |
| IMP | -11 | Inosinic acid Inosine monophosphate Inosine 5'-monophosphate Inosine 5'-phosphate 5'-Inosinate 5'-Inosinic acid 5'-Inosine monophosphate 5'-IMP |
| Indole | 0 | 2,3-Benzopyrrole |
| Indoleglycerol phosphate | -2 | 1-C-(Indol-3-yl)glycerol 3-phosphate (3-Indolyl)-glycerol phosphate C1-(3-Indolyl)-glycerol 3-phosphate (1S,2R)-1-C-(Indol-3-yl)glycerol 3-phosphate Indole-3-glycerol phosphate |
| Inosine | 1 | |
| Isochorismate | -2 | Isochorismic acid |
| Isocitrate | 0 | Isocitric acid 1-Hydroxytricarballylic acid 1-Hydroxypropane-1,2,3-tricarboxylic acid |
| Isopentenyl diphosphate | -14 | Delta3-Isopentenyl diphosphate Delta3-Methyl-3-butenyl diphosphate 3-Methylbut-3-en-1-yl diphosphate |
| ITP | -2 | Inosine 5'-triphosphate Inosine triphosphate Inosine tripolyphosphate |
| Kanamycin | -0.7 | |
| Kanamycin A 3'-phosphate | 0.7 | Kanamycin 3'-phosphate |
| Ketone | 3 | R-CO-R' |
| Lactate | 1 | Lactic acid 2-Hydroxypropanoic acid 2-Hydroxypropionic acid |
| L-Alanine | -2.8 | L-2-Aminopropionic acid L-alpha-Alanine |
| L-Alanyl-D-glutamate | -1 | |
| L-Alanyl-L-glutamate | 1 | |
| L-Alanyl-tRNA | 2.8 | L-Alanyl-tRNA(Ala) |
| L-Allothreonine | -2 | L-allo-Threonine |
| L-Arabinose | -2 | L-Arabinopyranose |
| L-Arginine | 0 | (S)-2-Amino-5-guanidinovaleric acid L-Arg |
| L-Arginyl-tRNA(Arg) | 3 | L-Arginyl-tRNA |
| L-Ascorbate 6-phosphate | 1 | |
| L-Asparagine | -1 | 2-Aminosuccinamic acid |
| L-Asparaginyl-tRNA(Asn) | 4 | Asn-tRNA(Asn) Asparaginyl-tRNA(Asn) |
| L-Aspartate | -24 | L-Aspartic acid 2-Aminosuccinic acid L-Asp |
| L-Aspartate 4-semialdehyde | 0 | Aspartate beta-semialdehyde L-Aspartic 4-semialdehyde |
| L-Aspartyl-tRNA(Asn) | -3 | Asp-tRNA(Asn) Aspartyl-tRNA(Asn) |
| L-Aspartyl-tRNA(Asp) | 3 | |
| L-Citrulline | -1 | 2-Amino-5-ureidovaleric acid Citrulline |
| L-Cystathionine | 4 | |
| L-Cysteine | -11 | L-2-Amino-3-mercaptopropionic acid |
| L-Cysteine-S-conjugate | -1 | S-Aryl-L-cysteine |
| L-Cysteinyl-tRNA(Cys) | 3 | |
| L-Fuculose | 0.2 | 6-Deoxy-L-tagatose |
| L-Fuculose 1-phosphate | -1 | |
| L-Glutamate | 22 | L-Glutamic acid L-Glutaminic acid Glutamate |
| L-Glutamate 5-semialdehyde | -3 | L-Glutamate gamma-semialdehyde |
| L-Glutamine | -31 | L-2-Aminoglutaramic acid |
| L-Glutamyl 5-phosphate | 6 | L-Glutamate 5-phosphate |
| L-Glutamyl-tRNA(Gln) | -3 | Glu-tRNA(Gln) Glutamyl-tRNA(Gln) |
| L-Glutamyl-tRNA(Glu) | 2 | |
| L-Histidine | 0 | (S)-alpha-Amino-1H-imidazole-4-propionic acid |
| L-Histidinol | -2 | |
| L-Histidinol phosphate | -4 | |
| L-Histidyl-tRNA(His) | 3 | |
| L-Homocysteine | -2 | L-2-Amino-4-mercaptobutyric acid Homocysteine |
| L-Homoserine | -10 | 2-Amino-4-hydroxybutyric acid |
| Lipoyl-AMP | 0 | |
| L-Isoleucine | -3 | 2-Amino-3-methylvaleric acid |
| L-Isoleucyl-tRNA(Ile) | 3 | |
| LL-2,6-Diaminoheptanedioate | 0.8 | LL-2,6-Diaminopimelate LL-2,6-Diaminopimelic acid |
| L-Leucine | -6 | 2-Amino-4-methylvaleric acid (2S)-alpha-2-Amino-4-methylvaleric acid (2S)-alpha-Leucine |
| L-Leucyl-tRNA | 3 | L-Leucyl-tRNA(Leu) |
| L-Lysine | -3 | Lysine acid 2,6-Diaminohexanoic acid |
| L-Lysyl-tRNA | 2 | L-Lysyl-tRNA(Lys) |
| L-Methionine | 6 | Methionine L-2-Amino-4methylthiobutyric acid |
| L-Methionine (R)-S-oxide | 1 | |
| L-Methionine (S)-S-oxide | 3 | |
| L-Methionyl-tRNA | 3 | L-Methionyl-tRNA(Met) |
| L-Norvaline | 0.2 | L-2-Aminovaleric acid L-2-Aminopentanoic acid (S)-2-Aminopentanoic acid |
| Long-chain fatty acid | -2 | Higher fatty acid |
| L-Ornithine | -1 | (S)-2,5-Diaminovaleric acid (S)-2,5-Diaminopentanoic acid (S)-2,5-Diaminopentanoate |
| L-Phenylalanine | -3 | (S)-alpha-Amino-beta-phenylpropionic acid |
| L-Phenylalanyl-tRNA(Phe) | 3 | |
| L-Proline | -6 | 2-Pyrrolidinecarboxylic acid |
| L-Prolyl-tRNA(Pro) | 3 | |
| L-Rhamnose | -1 | 6-Deoxy-L-mannose L-Mannomethylose L-Rhamnopyranose |
| L-Rhamnulose | 0 | 6-Deoxy-L-fructose |
| L-Rhamnulose 1-phosphate | 0 | |
| L-Ribulose | 2 | L-erythro-Pentulose L-Arabinoketose L-Arabinulose L-Riboketose |
| L-Ribulose 5-phosphate | -4.2 | |
| L-Selenocysteine | -3 | |
| L-Selenocysteinyl-tRNA(Sec) | 1 | |
| L-Serine | -9.2 | L-2-Amino-3-hydroxypropionic acid L-3-Hydroxy-alanine Serine |
| L-Seryl-tRNA(Sec) | -1 | |
| L-Seryl-tRNA(Ser) | 3 | |
| L-Sorbose | -0.8 | L-xylo-Hexulose |
| L-Threonine | -7 | 2-Amino-3-hydroxybutyric acid |
| L-Threonylcarbamoyladenylate | 0 | L-Threonylcarbamoyl-AMP TC-AMP |
| L-Threonyl-tRNA(Thr) | 3 | |
| L-Tryptophan | 0 | Tryptophan (S)-alpha-Amino-beta-(3-indolyl)-propionic acid |
| L-Tyrosine | -3 | (S)-3-(p-Hydroxyphenyl)alanine (S)-2-Amino-3-(p-hydroxyphenyl)propionic acid Tyrosine |
| L-Tyrosyl-tRNA(Tyr) | 3 | |
| L-Valine | -5 | 2-Amino-3-methylbutyric acid |
| L-Valyl-tRNA(Val) | 3 | |
| L-Xylulose | -0.8 | L-threo-Pentulose L-Lyxulose |
| L-Xylulose 5-phosphate | 3 | |
| Malonyl-[acyl-carrier protein] | -1 | Malonyl-[acp] |
| Malonyl-CoA | 4.5 | Malonyl coenzyme A |
| Maltodextrin | 1 | Maltodextrin(n) Maltodextrin(n-2) n+2 Maltodextrin Linear maltodextrin Maltooligosaccharide |
| Maltose | -3.8 | Malt sugar alpha-D-Glucopyranosyl-(1->4)-D-glucopyranose |
| Maltose 6'-phosphate | 1 | |
| Mannitol | -1 | D-Mannitol |
| Membrane-derived-oligosaccharide 6-(glycerophospho)-D-glucose | 1 | |
| Membrane-derived-oligosaccharide D-glucose | -1 | |
| meso-2,6-Diaminoheptanedioate | 0 | meso-2,6-Diaminopimelate meso-2,6-Diaminopimelic acid meso-Diaminoheptanedioate |
| Methanethiol | -2 | Methylmercaptan |
| Methionyl peptide | 3 | |
| Monoamide of dicarboxylate | -1 | Monoamide of dicarboxylic acid |
| Monocarboxylic acid amide | -1 | |
| myo-Inositol | 2 | D-myo-Inositol 1D-myo-Inositol L-myo-Inositol 1L-myo-Inositol meso-Inositol Inositol Dambose Cyclohexitol Meat sugar Bios I |
| myo-Inositol phosphate | -3 | |
| N-(4-Oxoglutaryl)-L-cysteinylglycine | -1.6 | Deaminated glutathione |
| N-(5'-Phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-D-ribosyl)-4-imidazolecarboxamide | 0 | 5-[(5-Phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide Phosphoribulosyl-formimino-AICAR-phosphate 5-[(5-Phospho-1-deoxy-D-ribulos-1-ylamino)methylideneamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide |
| N-(5-Phospho-D-ribosyl)anthranilate | -3 | N-(5-Phospho-beta-D-ribosyl)anthranilate N-(5-Phosphoribosyl)anthranilic acid |
| N-(L-Arginino)succinate | 0 | 2-(Nomega-L-Arginino)succinate L-Argininosuccinate L-Argininosuccinic acid L-Arginosuccinic acid |
| N,N'-Diacetylchitobiose 6'-phosphate | 1 | |
| N6-(1,2-Dicarboxyethyl)-AMP | 0 | N6-(1,2-Dicarboxyethyl)AMP Adenylosuccinate Adenylosuccinic acid |
| N6-Acetyl-LL-2,6-diaminoheptanedioate | -1 | N2-Acetyl-LL-2,6-diaminoheptanedioate N6-Acetyl-LL-2,6-diaminopimelate N2-Acetyl-LL-2,6-diaminopimelate N6-Acetyl-L-2,6-diaminoheptanedioate N6-Acetyl-L-2,6-diaminopimelate N-Acetyl-LL-2,6-diaminoheptanedioate |
| N6-L-Threonylcarbamoyladenine in tRNA | 3 | t6A in tRNA |
| N-Acetyl-alpha-D-glucosamine 1-phosphate | 0 | |
| N-Acetyl-alpha-D-glucosaminyl-diphospho-trans,octacis-decaprenol | 2 | |
| N-Acetyl-D-glucosamine 6-phosphate | -2 | |
| N-Acetyl-D-glucosaminyldiphosphoundecaprenol | 2 | N-Acetyl-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol N-Acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol Lipid I |
| N-Acetyldiamine | 2 | |
| N-Acetyl-L-2-amino-6-oxopimelate | 1 | L-2-Acetamido-6-oxoheptanedioate L-2-Acetamido-6-oxopimelate |
| N-Acetyl-L-glutamate | 2 | N-Acetyl-L-glutamic acid |
| N-Acetyl-L-glutamate 5-phosphate | 4 | N-Acetyl-L-glutamyl 5-phosphate |
| N-Acetyl-L-glutamate 5-semialdehyde | 0 | 2-Acetamido-5-oxopentanoate |
| N-Acetylmuramic acid 6-phosphate | 1 | N-Acetylmuramate 6-phosphate MurNAc 6-phosphate |
| N-Acetylneuraminate | 2 | N-Acetylneuraminic acid 5-Acetamido-3,5-dideoxy-D-glycero-D-galacto-2-nonulosonic acid Neu5Ac |
| N-Acetyl-O-acetylneuraminate | -2 | |
| N-Acetylornithine | -4 | N2-Acetyl-L-ornithine |
| N-Acylsphingosine | 3 | Ceramide N-Acylsphing-4-enine (4E)-Sphing-4-enine ceramide |
| NAD+ | -81.8 | NAD Nicotinamide adenine dinucleotide DPN Diphosphopyridine nucleotide Nadide beta-NAD+ |
| NADH | 72.8 | DPNH Reduced nicotinamide adenine dinucleotide |
| NADP+ | -71.3 | NADP Nicotinamide adenine dinucleotide phosphate beta-Nicotinamide adenine dinucleotide phosphate TPN Triphosphopyridine nucleotide beta-NADP+ |
| NADPH | 77.3 | TPNH Reduced nicotinamide adenine dinucleotide phosphate |
| N-Carbamoyl-L-aspartate | 6 | |
| NDP | 3 | Nucleoside diphosphate Nucleoside 5'-diphosphate |
| N-D-Ribosylpurine | -3 | Purine nucleoside Purine ribonucleoside |
| Nicotinamide | 3 | Nicotinic acid amide Niacinamide Vitamin PP |
| Nicotinamide D-ribonucleotide | 0.2 | NMN Nicotinamide mononucleotide Nicotinamide ribonucleotide Nicotinamide nucleotide beta-Nicotinamide D-ribonucleotide beta-Nicotinamide ribonucleotide beta-Nicotinamide mononucleotide |
| Nicotinate | -3 | Nicotinic acid Niacin 3-Pyridinecarboxylic acid |
| Nicotinate D-ribonucleotide | 2.8 | beta-Nicotinate D-ribonucleotide Nicotinate ribonucleotide Nicotinic acid ribonucleotide |
| NMNH | 3 | Reduced nicotinamide nucleotide |
| N-Substituted amino acid | 2.8 | |
| N-Substituted aminoacyl-tRNA | -2.8 | |
| N-Succinyl-2-L-amino-6-oxoheptanedioate | 4 | N-Succinyl-L-2-amino-6-oxoheptanedioate N-Succinyl-L-2-amino-6-oxopimelate N-Succinyl-2-amino-6-oxo-L-pimelic acid N-Succinyl-epsilon-keto-L-aminopimelic acid (S)-2-(Succinylamino)-6-oxoheptanedioate |
| N-Succinyl-LL-2,6-diaminoheptanedioate | -4.8 | N-Succinyl-LL-2,6-diaminopimelate N-Succinyl-L-2,6-diaminoheptanedioate N-Succinyl-L-2,6-diaminopimelate |
| Nucleoside 3',5'-bisphosphate | -2 | |
| Nucleoside 3'-phosphate | 1 | |
| Nucleoside 5'-phosphate | 2 | |
| Nucleoside triphosphate | -5 | NTP Nucleoside 5'-triphosphate |
| O-Acetyl-L-homoserine | 0 | O-Acetylhomoserine |
| O-Acetyl-L-serine | 0 | O3-Acetyl-L-serine |
| O-D-Alanyl-poly(ribitol phosphate) | 1 | |
| O-Phospho-4-hydroxy-L-threonine | -2 | 4-(Phosphonooxy)-threonine 4-(Phosphonooxy)-L-threonine 4-Phosphooxy-L-threonine |
| O-Phospho-D-serine | -1.8 | D-O-Phosphoserine |
| O-Phospho-L-homoserine | 0 | |
| O-Phospho-L-serine | -3.8 | L-O-Phosphoserine 3-Phosphoserine Dexfosfoserine 3-Phospho-L-serine |
| Orotate | 9 | Orotic acid Uracil-6-carboxylic acid |
| Orotidine 5'-phosphate | -6 | Orotidylic acid |
| Orthophosphate | 155.7 | Phosphate Phosphoric acid Orthophosphoric acid |
| O-Succinyl-L-homoserine | 0 | O4-Succinyl-L-homoserine O-Succinylhomoserine |
| Oxalate | -3 | Oxalic acid Ethanedioic acid |
| Oxaloacetate | -3 | Oxalacetic acid Oxaloacetic acid 2-Oxobutanedioic acid 2-Oxosuccinic acid keto-Oxaloacetate |
| Oxalosuccinate | 0 | Oxalosuccinic acid |
| Oxalyl-CoA | 1 | |
| Oxidized [2Fe-2S] ferredoxin | 2 | |
| Oxidized ferredoxin | 0 | Oxidized ferredoxin [iron-sulfur] cluster |
| Oxidized flavodoxin | 1 | |
| Oxygen | -6 | O2 |
| Palmitoyl-CoA | -1 | Hexadecanoyl-CoA |
| Pantetheine 4'-phosphate | -3 | 4'-Phosphopantetheine Phosphopantetheine D-Pantetheine 4'-phosphate |
| Pantothenate | -3 | Pantothenic acid (R)-Pantothenate |
| p-Benzoquinone | 1 | Quinone Chinone 2,5-Cyclohexadiene-1,4-dione 1,4-Benzoquinone |
| Peptide-L-methionine | -6 | |
| Peptide-L-methionine (R)-S-oxide | 3 | |
| Peptide-L-methionine (S)-S-oxide | 3 | |
| Peptidoglycan-D-glucosamine | 2 | Deacetylated peptidoglycan |
| Peptidylproline (omega=0) | 3 | |
| Peptidylproline (omega=180) | -3 | |
| Phenol | 1 | |
| Phenyl acetate | -1 | |
| Phenylpyruvate | 2 | Phenylpyruvic acid alpha-Ketohydrocinnamic acid keto-Phenylpyruvate 3-Phenyl-2-oxopropanoate 2-Oxo-3-phenylpropanoate |
| Phosphatidate | 1 | Phosphatidic acid 1,2-Diacyl-sn-glycerol 3-phosphate 3-sn-Phosphatidate |
| Phosphatidylglycerol | -4 | 3-(3-sn-Phosphatidyl)glycerol 3(3-Phosphatidyl-)glycerol PtdGro |
| Phosphatidylglycerophosphate | 3 | 1-(3-sn-Phosphatidyl)-sn-glycerol 3-phosphate 3-(3-Phosphatidyl)-D-glycerol 1-phosphate 1,2-Diacyl-sn-glycero-3-phospho-sn-glycerol 3'-phosphate |
| Phosphoenolpyruvate | 1.2 | Phosphoenolpyruvic acid PEP |
| Phospholipid cyclopropane fatty acid | 3 | |
| Phospholipid olefinic fatty acid | -3 | |
| Phosphoprotein | 3 | |
| Phosphoribosyl-AMP | 0 | N1-(5-Phospho-D-ribosyl)-AMP 1-(5-Phosphoribosyl)-AMP 1-(5-Phospho-beta-D-ribosyl)-AMP |
| Poly(ribitol phosphate) | -1 | Poly-1,5-ribitol phosphate (Ribitol phosphate)n (Ribitol phosphate)n+1 |
| Polyphosphate | 0 | (Phosphate)n (Phosphate)n+1 (Phosphate)n-1 (Polyphosphate)n (Polyphosphate)n-1 |
| Prephenate | -1 | Prephenic acid |
| Primary alcohol | -3 | 1-Alcohol |
| Prokaryotic ubiquitin-like protein | 0 | [Prokaryotic ubiquitin-like protein]-L-glutamate Pup |
| Propanoyl-CoA | -1 | Propionyl-CoA Propionyl coenzyme A |
| Protein | -3 | |
| Protein histidine | 9.6 | Protein L-histidine [Protein]-L-histidine |
| Protein lysine | 2 | Peptidyl-L-lysine [Protein]-L-lysine |
| Protein N(pi)-phospho-L-histidine | -10.6 | Protein N-pros-phospho-L-histidine Protein N-pros-phosphohistidine Protein Npi-phospho-L-histidine |
| Protein N6-(lipoyl)lysine | 6 | [Lipoyl-carrier protein]-N6-(lipoyl)lysine |
| Protein N6-acetyl-L-lysine | -3 | Acetylprotein [Protein]-N6-acetyl-L-lysine |
| Protein S-methyl-L-cysteine | 2 | |
| Protein tyrosine | 2.2 | [Protein]-L-tyrosine |
| Protein tyrosine phosphate | -2.2 | [Protein]-L-tyrosine phosphate |
| Protein-L-arginine | 1 | Peptide L-arginine |
| Protoporphyrin | 1 | Protoporphyrin IX Porphyrinogen IX |
| Pupylated protein | 2 | N6-([Prokaryotic ubiquitin-like protein]-gamma-L-glutamyl)-[protein]-L-lysine |
| Purine | 3 | Purine base |
| Purine deoxyribonucleoside | -1 | Purine 2'-deoxyribonucleoside |
| Putrescine | 1 | 1,4-Butanediamine 1,4-Diaminobutane Tetramethylenediamine Butane-1,4-diamine |
| Pyridoxal | -1 | |
| Pyridoxal phosphate | 5 | Pyridoxal 5'-phosphate Pyridoxal 5-phosphate PLP |
| Pyridoxine | -2 | Pyridoxol |
| Pyruvate | 9.2 | Pyruvic acid 2-Oxopropanoate 2-Oxopropanoic acid Pyroracemic acid |
| Quinone | -9.3 | |
| Reduced [2Fe-2S] ferredoxin | -2 | |
| Reduced acceptor | -3 | AH2 Hydrogen-donor Donor |
| Reduced coenzyme F420 | -1 | |
| Reduced ferredoxin | 0 | Reduced ferredoxin [iron-sulfur] cluster |
| Reduced flavodoxin | -1 | |
| Reduced FMN | -2.5 | FMNH2 |
| Riboflavin | -3 | Lactoflavin 7,8-Dimethyl-10-ribitylisoalloxazine Vitamin B2 |
| Ribonucleoside | 3 | |
| Ribonucleoside diphosphate | 3 | Ribonucleoside 5'-diphosphate |
| Ribonucleoside triphosphate | -2 | Ribonucleoside 5'-triphosphate |
| RNA | 0 | RNAn RNAn+1 RNA(linear) (Ribonucleotide)n (Ribonucleotide)m (Ribonucleotide)n+m Ribonucleic acid |
| ROH | 7 | |
| ROOH | -7 | Hydroperoxide |
| R-S-Cysteinylglycine | -2 | [L-Cysteinylglycine]-S-conjugate |
| S-(Hercyn-2-yl)-L-cysteine S-oxide | 2 | |
| S-Adenosyl-L-homocysteine | 61.4 | S-Adenosylhomocysteine |
| S-Adenosyl-L-methionine | -66.4 | S-Adenosylmethionine AdoMet SAM |
| Salicylate | 2 | o-Hydroxybenzoic acid Salicylic acid |
| Secondary alcohol | -3 | R-CHOH-R' |
| Sedoheptulose 7-phosphate | -4.4 | D-Sedoheptulose 7-phosphate D-altro-Heptulose 7-phosphate altro-Heptulose 7-phosphate |
| Selenophosphoric acid | -1 | Selenophosphate |
| Semiquinone | 1.7 | Semiquinone radical Semidione Benzosemiquinone |
| Shikimate | -4.2 | Shikimic acid 3,4,5-Trihydroxy-1-cyclohexenecarboxylic acid |
| S-Inosyl-L-homocysteine | 1 | |
| sn-Glycero-3-phosphocholine | 3 | Glycerophosphocholine |
| sn-Glycerol 1-phosphate | 1 | sn-Gro-1-P L-Glycerol 1-phosphate |
| sn-Glycerol 3-phosphate | -5.8 | Glycerophosphoric acid D-Glycerol 1-phosphate |
| Sorbitol 6-phosphate | 0 | D-Sorbitol 6-phosphate D-Glucitol 6-phosphate |
| Sorbose 1-phosphate | 0.8 | L-Sorbose 1P L-xylo-Hexulose 1-phosphate L-Sorbose 1-phosphate |
| S-Ribosyl-L-homocysteine | 0 | S-D-Ribosyl-L-homocysteine Ribose-5-S-homocysteine S-Ribosylhomocysteine S-(5-Deoxy-D-ribos-5-yl)-L-homocysteine |
| Substituted beta-amino acid | 1 | |
| Succinate | 2.2 | Succinic acid Butanedionic acid Ethylenesuccinic acid |
| Succinate semialdehyde | -2 | Succinic semialdehyde 4-Oxobutanoate |
| Succinyl-CoA | -2 | Succinyl coenzyme A |
| Sucrose | -2 | Cane sugar Saccharose 1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside |
| Tetrahydrofolate | 3 | 5,6,7,8-Tetrahydrofolate Tetrahydrofolic acid THF (6S)-Tetrahydrofolate (6S)-Tetrahydrofolic acid (6S)-THFA |
| Tetrahydropteroyltri-L-glutamate | 3 | (6S)-H4PteGlu3 |
| THF-polyglutamate | 0 | Tetrahydropteroyl-[gamma-Glu]n Tetrahydrofolyl-[Glu](n-1) (6S)-H4PteGlu(n) Tetrahydropteroyl-[gamma-Glu]n+1 Tetrahydrofolyl-[Glu](n) |
| Thiamin diphosphate | 3 | Thiamine diphosphate Thiamin pyrophosphate TPP ThPP |
| Thiamin monophosphate | 2 | Thiamine monophosphate Thiamin phosphate Thiamine phosphate TMP |
| Thiamine | -5 | Thiamin Vitamin B1 Aneurin Antiberiberi factor |
| Thiol | 3 | Mercaptan |
| Thioredoxin | 4 | Reduced thioredoxin |
| Thioredoxin disulfide | -4 | Oxidized thioredoxin Thioredoxin sulfide |
| Thymidine | -2 | Deoxythymidine |
| Thymine | 1 | 5-Methyluracil |
| trans,trans-Farnesyl diphosphate | -3 | Farnesyl diphosphate Farnesyl pyrophosphate 2-trans,6-trans-Farnesyl diphosphate (2E,6E)-Farnesyl diphosphate |
| trans-2,3-Dehydroacyl-[acyl-carrier protein] | 2 | trans-2-Enoyl-[acyl-carrier protein] |
| Triphosphate | 1 | Triphosphoric acid Tripolyphosphate Inorganic triphosphate |
| tRNA | 5.8 | tRNA(n) tRNA(n+1) transfer RNA |
| tRNA adenine | -3 | Adenosine in tRNA |
| tRNA precursor | -1 | |
| tRNA uridine | -1 | Uracil in tRNA |
| tRNA with a 3' CC end | 0 | tRNA with a 3' CC |
| tRNA with a 3' CCA end | 1 | |
| tRNA with a 3' cytidine | -1 | |
| tRNA(Ala) | 0.2 | |
| tRNA(Arg) | -3 | |
| tRNA(Asn) | -1 | |
| tRNA(Asp) | -3 | |
| tRNA(Cys) | -3 | |
| tRNA(Glu) | -2 | |
| tRNA(Gly) | -3 | |
| tRNA(His) | -3 | |
| tRNA(Ile) | -3 | |
| tRNA(Leu) | -3 | |
| tRNA(Lys) | -2 | |
| tRNA(Met) | -3 | |
| tRNA(Phe) | -3 | |
| tRNA(Pro) | -3 | |
| tRNA(Ser) | -3 | |
| tRNA(Thr) | -3 | |
| tRNA(Trp) | -3 | |
| tRNA(Tyr) | -3 | |
| tRNA(Val) | -3 | |
| Ubiquinol | 1 | QH2 CoQH2 Ubiquinol-n |
| Ubiquinone | -1 | Coenzyme Q CoQ |
| UDP | 13.8 | Uridine 5'-diphosphate |
| UDP-alpha-D-galactofuranose | -1.6 | UDP-alpha-D-galacto-1,4-furanose UDP-D-galacto-1,4-furanose |
| UDP-alpha-D-galactose | 3.4 | UDP-D-galactose UDP-galactose UDP-D-galactopyranose UDP-alpha-D-galactopyranose |
| UDP-D-galacturonate | 1.8 | UDPgalacturonate UDP-alpha-D-galacturonate |
| UDP-glucose | -8.8 | UDPglucose UDP-D-glucose Uridine diphosphate glucose UDP-alpha-D-glucose |
| UDP-glucuronate | 0.2 | UDPglucuronate UDP-D-glucuronate UDP-alpha-D-glucuronate |
| UDPMurNAc(oyl-L-Ala-D-gamma-Glu-L-Lys-D-Ala-D-Ala) | 3 | UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanine UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine |
| UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine | 5.8 | UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine UDP-N-acetylglucosamine-3-O-pyruvateether UDP-N-acetylglucosamine enolpyruvate UDP-N-acetyl-3-O-(1-carboxyvinyl)-alpha-D-glucosamine |
| UDP-N-acetyl-alpha-D-glucosamine | -7.8 | UDP-N-acetyl-D-glucosamine UDP-N-acetylglucosamine |
| UDP-N-acetyl-D-mannosamine | 1 | UDP-N-acetyl-alpha-D-mannosamine |
| UDP-N-acetylmuramate | -6 | UDP-N-acetyl-alpha-D-muramate UDP-N-acetylmuramic acid UDP-MurNAc |
| UDP-N-acetylmuramoyl-L-alanine | 0 | UDP-N-acetyl-alpha-D-muramoyl-L-alanine |
| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate | 3 | UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate |
| UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-L-lysine | -3 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysine |
| UMP | 5 | Uridylic acid Uridine monophosphate Uridine 5'-monophosphate 5'Uridylic acid |
| Undecaprenol | -1 | |
| Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-isoglutaminyl-L-lysyl-D-alanyl-D-alanine | 3 | beta-D-GlcNAc-(1->4)-MurNAc-L-Ala-gamma-D-O-P-Glu-L-Lys-D-Ala-D-Ala-diphospho-ditrans,octacis-undecaprenol |
| Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanine | -4 | GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol GlcNAc-(1->4)-MurNAc(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphospho-ditrans,octacis-undecaprenol |
| Uracil | 4.8 | |
| Uridine | -1.8 | |
| Uridylyl-[protein-PII] | 2 | Uridylylated nitrogen regulatory protein P-II P-II-UMP |
| UTP | -10.8 | Uridine 5'-triphosphate Uridine triphosphate |
| Water | -223.1 | Water |
| Xanthine | 3.8 | |
| Xanthosine 5'-phosphate | -0.8 | Xanthylic acid XMP (9-D-Ribosylxanthine)-5'-phosphate |
| XTP | -2 | Xanthosine 5'-triphosphate |
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