Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank Bacteria Thryve
960 Samples
BiomeSight
930 Samples
uBiome
813 Samples
SequentiaBiotech
36 Samples
CosmosId
34 Samples
custom
18 Samples
AmericanGut
18 Samples
Microba
15 Samples
BiomeSightRdp
10 Samples
Medivere
7 Samples
es-xenogene
4 Samples
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
Canidae 1
Escherichia virus phiX174 1
Euaesthetinae 1
Evacanthinae 1
Guizotia 1
mitosporic Phaeosphaeriaceae 1
Scolopacidae 1
Trapezitinae 1
Unknown 115117 1
Unknown 1247519 1
Unknown 28906 1
Unknown 302788 4
Unknown 34985 4
Unknown 34988 4
Unknown 36851 8
Unknown 469594 11
Unknown 469608 1
Unknown 755821 1
biotype Haemophilus influenzae aegyptius 1
biotype Mycobacterium tuberculosis variant caprae 1
biotype Mycobacterium tuberculosis variant pinnipedii 100
clade 1
clade 50 kb inversion clade 11 266 2 3 1
clade Amniota 1
clade ant endosymbionts 246 6 4
clade ant, tsetse, mealybug, aphid, etc. endosymbionts 254 1 6 4
clade aphid secondary symbionts 15 1
clade asterids 18
clade Bacteria candidate phyla 199 6 1 3
clade Bacteroidetes/Chlorobi group 949 928 790 36 33 17 18 14 10 7 4
clade Bilateria 7 165 11 1 5 1 1 4
clade Boreoeutheria 1
clade Caldiserica/Cryosericota group 5 1 1
clade Candidatus Baumannia 1
clade Candidatus Dependentiae 3
clade Candidatus Uzinura 1
clade core chlorophytes 1
clade core genistoids 11 266 2 3 1
clade Cyanobacteria/Melainabacteria group 668 869 31 18 5 7 4 7 4
clade Deuterostomia 5 1 1
clade Dicondylia 7 104 11 1 4 1 1 4
clade Dipnotetrapodomorpha 5 1 1
clade dothideomyceta 1
clade Ecdysozoa 7 104 11 1 4 1 1 4
clade Embryophyta 11 268 18 2 3 1
clade eudicotyledons 11 268 18 2 3 1
clade Eumetazoa 7 191 11 1 5 1 1 4
clade Euphyllophyta 11 268 18 2 3 1
clade Euteleostomi 5 1 1
clade Eutheria 1
clade fabids 11 266 2 3 1
clade FCB group 949 928 790 36 33 17 18 15 10 7 4
clade genistoids sensu lato 11 266 2 3 1
clade Gnathostomata 5 1 1
clade Gunneridae 11 268 18 2 3 1
clade lamiids 18
clade leotiomyceta 1 1
clade lice endosymbionts 1
clade Lophotrochozoa 179 1
clade Luna-1 subcluster 2 1 3
clade Mandibulata 7 104 11 1 4 1 1 4
clade mealybug secondary endosymbionts 1
clade Mesangiospermae 11 268 18 2 3 1
clade Metamonada 1
clade Methanomada group 214 268 220 16 3 4 11 6 7
clade Nitrospinae/Tectomicrobia group 5 3
clade OM182 clade 1
clade OMG group 1
clade Opisthokonta 7 191 11 1 5 13 1 6 4
clade Panarthropoda 7 104 11 1 4 1 1 4
clade Pancrustacea 7 104 11 1 4 1 1 4
clade Patescibacteria group 1
clade Pentapetalae 11 268 18 2 3 1
clade Protostomia 7 160 11 1 4 1 1 4
clade PVC group 884 867 567 29 17 17 14 7 10 5 4
clade Rhizaria 2 2
clade rosids 11 266 2 3 1
clade saccharomyceta 1 6
clade Sar 2 2 2
clade SAR116 cluster 1
clade sordariomyceta 1
clade Spermatophyta 11 268 18 2 3 1
clade Spiralia 179 1
clade Stenosarchaea group 8 8 10 1
clade Stramenopiles 2
clade sulfur-oxidizing symbionts 1 1
clade TACK group 3 7 1
clade Teleostomi 5 1 1
clade Terrabacteria group 949 928 792 36 33 17 18 15 10 7 4
clade Tetrapoda 5 1 1
clade Theria 1
clade Tracheophyta 11 268 18 2 3 1
clade Vertebrata 5 1 1
class 1
class 1
class Acidimicrobiia 298 117 2 3 3 1
class Acidithiobacillia 34 1 1
class Acidobacteriia 566 155 111 2 2 2 4
class Actinomycetia 951 923 785 35 33 14 17 12 10 7 4
class Agaricomycetes 1
class algae 2 2
class Alphaproteobacteria 926 905 438 32 4 4 7 8 10 7 4
class Amphibia 5 1
class Anaerolineae 200 379 9 1 5 7 4
class Anthozoa 36 1
class Aquificae 46 7 3 3 4
class Archaeoglobi 1
class Ardenticatenia 11 3 1
class Armatimonadia 1
class Bacilli 980 929 786 36 32 14 18 13 10 7 4
class Bacteroidia 980 929 790 36 33 17 18 14 10 7 4
class Balneolia 494 49 7 2 3
class Betaproteobacteria 977 927 747 36 31 12 18 12 10 7 4
class Bivalvia 123
class Blastocatellia 119 1 1 3
class Caldilineae 246 293 2 5 7 3
class Caldisericia 5 1 1
class Calditrichia 4 185 7 1
class Candidatus Babeliae 3
class Candidatus Brocadiia 10 1
class Chitinispirillia 13 2
class Chitinivibrionia 2
class Chitinophagia 764 453 5 5 1 1 7 6 4
class Chlamydiia 114 75 1 1 1
class Chlorobia 71 750 1 1 1 2 4
class Chloroflexia 51 2 2 14 1 1
class Chlorophyceae 1
class Chrysiogenetes 15 169 1 1
class Chthonomonadetes 97 4 3
class Clostridia 980 929 792 36 33 17 18 14 10 7 4
class Conoidasida 1
class Coprothermobacteria 45 10 7
class Coriobacteriia 976 922 786 36 33 12 18 10 10 7 4
class Cytophagia 840 898 7 12 4 7 6 4
class Deferribacteres 85 232 1 1 4 4
class Dehalococcoidia 192 73 1 1 1 1 4
class Deinococci 215 597 7 13 1 5 7 4
class Deltaproteobacteria 937 919 646 33 20 12 14 12 10 7 4
class Dictyoglomia 65 2 1
class Dothideomycetes 1
class Elusimicrobia 73 7 7 19 3 5 7 1
class Endomicrobia 1
class Epsilonproteobacteria 457 498 266 10 3 2 7 7 7 4
class Erysipelotrichia 980 927 785 36 32 8 17 8 10 7 4
class Eurotiomycetes 1 1
class Fibrobacteria 220 81 186 2 1
class Fimbriimonadia 23 2 1
class Flavobacteriia 523 818 458 12 3 3 2 4 7 4
class Florideophyceae 10
class Fusobacteriia 578 472 144 7 4 2 2 5 6 4
class Gammaproteobacteria 978 929 719 36 31 12 18 12 10 7 4
class Gastropoda 74 1
class Gemmatimonadetes 41 4 1 15 1 4 7 1
class Gloeobacteria 8 1 1
class Halobacteria 1 2 1
class Heterolobosea 4
class Holophagae 495 431 2 5
class Hydrogenophilalia 232 438 6 1 1 1
class Ignavibacteria 667 31 2 16 2 6 4
class Insecta 7 104 11 1 4 1 1 4
class Ktedonobacteria 10 69 1 3
class Lentisphaeria 255 283 6 2 3 5 1 5 1
class Limnochordia 1 1
class Magnoliopsida 11 268 18 2 3 1
class Mammalia 1
class Methanobacteria 218 268 220 16 3 4 11 6 7
class Methanococci 1
class Methanomicrobia 7 6 10 1
class Methylacidiphilae 9 1 1
class Mollicutes 857 897 167 25 1 9 2 9 6 4
class Negativicutes 980 926 792 34 33 15 17 13 10 7 4
class Nitriliruptoria 41 494 3 1 1
class Nitrososphaeria 1 3
class Nitrospinia 5 3
class Nitrospira 47 162 1 1 6 4
class Oligoflexia 81 18 1 1 1 1 1 4
class Oligosphaeria 37 1
class Opitutae 359 566 96 1 3 2 3 4 4
class Phycisphaerae 2 1 4
class Pisoniviricetes 1
class Planctomycetia 101 12 1 1 4
class Rhodothermia 11 18
class Rubrobacteria 91 7 3 2 3
class Saccharomycetes 1 6
class Saprospiria 126 45 4
class Solibacteres 30 1
class Sordariomycetes 1
class Spartobacteria 52 18
class Sphingobacteriia 564 929 18 26 5 4 8 7 4
class Spirochaetia 168 414 16 4 4 1 4
class Synergistia 368 692 236 1 1 2 1 6 7 4
class Thermoanaerobaculia 77
class Thermococci 1 2 1
class Thermodesulfobacteria 22 97 2 1
class Thermodesulfovibrionia Umezawa et al. 2021 1 16
class Thermoflexia 4
class Thermoleophilia 78 18 1
class Thermolithobacteria 39
class Thermomicrobia 13 2 1
class Thermoplasmata 28 36 1
class Thermoprotei 4
class Thermotogae 17 39 1 6 4
class Tissierellia 940 921 512 14 9 5 8 10 7 4
class Tremellomycetes 1 13
class unclassified Cyanobacteria 1
class Verrucomicrobiae 879 811 492 26 14 15 13 7 10 3 4
class Vicinamibacteria 1
class Zetaproteobacteria 28 1 1 1
cohort Endopterygota 4 3
cohort Paraneoptera 2 99 11 1 1
cohort Polyneoptera 7 7 1 1
family Acanthopleuribacteraceae 54
family Acaryochloridaceae 3
family Acetobacteraceae 302 287 2 1 1 1 1 3 4
family Acholeplasmataceae 632 844 19 15 2 5 6 4
family Acidaminococcaceae 908 861 565 22 21 12 13 9 6 7 4
family Acidiferrobacteraceae 16 4
family Acidimicrobiaceae 287 117 2 3 1
family Acidithiobacillaceae 34 1 1
family Acidobacteriaceae 143 154 87 1 2 2 4
family Acidothermaceae 42 1
family Actinomycetaceae 858 738 634 24 28 5 8 1 10 7 4
family Actinopolymorphaceae 1 58 1
family Actinopolysporaceae 164 191 4 1
family Aerococcaceae 801 390 80 2 3 1 8 7 4
family Aeromonadaceae 190 214 7 4 1 1 3 1 2 4
family Akkermansiaceae 947 858 811 36 27 17 18 14 9 4 4
family Alcaligenaceae 189 920 6 10 3 1 2 7 4
family Alcanivoracaceae 19 100 1 1
family Algiphilaceae 40
family Alicyclobacillaceae 309 2 7 3 5 4
family Alsobacteraceae 2
family Alteromonadaceae 403 302 1 2 1 1 4
family Amaranthaceae 3
family Amoebophilaceae 2 814 1 5 1
family Anaerolineaceae 199 142 8 1 5 4
family Anaeromyxobacteraceae 563 1 1 1
family Anaeroplasmataceae 350 86 128 3 1 2 4 2
family anamorphic Herpotrichiellaceae 1
family Anaplasmataceae 21 231 1 1 1 2 4
family Aphanizomenonaceae 2 607 7 4
family Aphanothecaceae 3 1 1
family Aphididae 1 1
family Aquificaceae 15 7 2 3 3
family Archaeoglobaceae 1
family Archangiaceae 70 26 1 1
family Arcobacteraceae Waite et al. 2017 20 59 1 1 1 4
family Ardenticatenaceae 11 3 1
family Armatimonadaceae 1
family Aspergillaceae 1 1
family Atopobiaceae 592 334 165 10 4 1 7 3 4
family Aurantimonadaceae 16 10 1 1
family Azonexaceae 21 87 1 1
family Azospirillaceae 459 471 1 2 1 3 6 2 4
family Bacillaceae 735 850 232 31 1 5 12 9 7 4
family Bacillales Family X. Incertae Sedis 467 924 3 4 7
family Bacillidae 6 7 1 1
family bacterial virus 1
family Bacteriovoracaceae 39 6 1 1 1
family Bacteroidaceae 980 929 784 35 33 17 18 14 10 7 4
family Balneatrichaceae 11
family Balneicellaceae 9
family Balneolaceae 490 49 1 2 3
family Barnesiellaceae 845 513 11 17 6 18 5 8 4
family Bartonellaceae 11 31 1 4
family Bdellovibrionaceae 9 12 1 1 1 1
family Beijerinckiaceae 9 28 4
family Bernardetiaceae 103 2 1
family Beutenbergiaceae 1
family Bifidobacteriaceae 980 923 813 36 33 15 18 14 10 7 4
family Blastocatellaceae 18 1 1
family Blastochloridaceae 5 1
family Blastocystidae 2
family Blattabacteriaceae 1 4
family Bogoriellaceae 39 7 1
family Borreliaceae 2 13 1 4
family Boseaceae 7 1 1 4
family Brachyspiraceae 22 13 1 4
family Bradymonadaceae 1
family Bradyrhizobiaceae 51 29 12 1 1 1 1 4
family Breoghaniaceae 1
family Brevibacteriaceae 91 63 60 1 1 7 4
family Brevinemataceae 5 1
family Brucellaceae 40 83 25 4 1 1 2 4
family Bruguierivoracaceae Li et al. 2021 26 4 1 4
family Bryobacteraceae 18 1
family Budviciaceae 260 1 9 1 4
family Burkholderiaceae 319 828 28 17 3 3 1 8 7 4
family Caedimonadaceae 1
family Caldicoprobacteraceae 32 235
family Caldilineaceae 244 293 2 5 7 3
family Caldisericaceae 5 1
family Calditrichaceae 4 185 7 1
family Caliciviridae 1
family Calotrichaceae 98 377 1 6 4
family Campylobacteraceae 378 371 265 7 3 2 7 5 7 4
family Candidatus Babeliaceae 3
family Candidatus Brocadiaceae 10 1
family Candidatus Competibacteraceae 156 2 1
family Candidatus Desulfofervidaceae 1
family Candidatus Methanomethylophilaceae 23
family Candidatus Midichloriaceae 1 1
family Candidatus Nanopelagicaceae 1 3
family Candidatus Paracaedibacteraceae 1
family Candidatus Scalinduaceae Lodha et al. 2021 10
family Cardiobacteriaceae 127 17 2 1 1
family Carnobacteriaceae 553 590 324 5 12 5 3 1 7 7 4
family Catabacteriaceae 129 98 1 1 1 8 6
family Catalimonadaceae 39
family Catenulisporaceae 3 4
family Caulobacteraceae 131 423 9 1 4 3 1 4
family Celerinatantimonadaceae 6
family Cellulomonadaceae 73 52 4 1 4
family Cellvibrionaceae 58 58 1 4
family Cesiribacteraceae 40
family Chamaesiphonaceae 5 3
family Chelatococcaceae 3 2 1
family Chitinispirillaceae 13 2
family Chitinivibrionaceae 2
family Chitinophagaceae 764 454 5 5 1 1 7 6 4
family Chlamydiaceae 2 1 1 1
family Chlorobiaceae 71 750 1 1 2 4
family Chloroflexaceae 1 2 1
family Chlorogloeopsidaceae 9
family Christensenellaceae 217 180 24 26 2 14 9 7 4
family Chromatiaceae 486 754 2 1 3 3 6 4
family Chromobacteriaceae 95 126 1 1 4
family Chroococcaceae 1 382 2 1
family Chroococcidiopsidaceae 1 1 1
family Chrysiogenaceae 15 170 1 1
family Chrysomelidae 4
family Chthoniobacteraceae 12 18
family Chthonomonadaceae 97 4 3
family Clostridiaceae 980 928 788 36 33 15 17 12 10 7 4
family Clostridiales Family XI. Incertae Sedis 217
family Clostridiales Family XVI. Incertae Sedis 24 510 4 3 2 1
family Clostridiales Family XVII. Incertae Sedis 83 37 1 1 6 2 4
family Coccidae 81 3
family Coelosphaeriaceae 23
family Cohaesibacteraceae 1 1
family Coleofasciculaceae 3 5
family Colwelliaceae 157 1 1 4
family Comamonadaceae 195 825 111 3 2 9 3 6 4
family Conexibacteraceae 8 6
family Coprobacillaceae Verbarg et al. 2014 736 916 393 5 29 5 11 4 7
family Coprothermobacteraceae 45 10 7
family Coriobacteriaceae 871 924 781 34 23 10 18 9 7 4
family Corynebacteriaceae 567 452 445 8 12 2 7 8 1 4
family Coxiellaceae 37 27 2 1 1 1
family Crenotrichaceae 1
family Criblamydiaceae 43
family Crocinitomicaceae 28 3 1 1
family Cryomorphaceae 91 1 1
family Cryptococcaceae 13
family Cryptosporangiaceae 1
family Cryptosporidiidae 1
family Cyanobacteriaceae 29 147 1
family Cyanobacteriaceae 29 147 1
family Cyanobiaceae Salazar et al., 2020 5 3 1 1 4
family Cyanothecaceae 1
family Cyclobacteriaceae 265 1 4
family Cytophagaceae 680 853 3 4 1 5 6 4
family Debaryomycetaceae 1
family Deferribacteraceae 98 233 1 1 4 4
family Defluviitaleaceae 225 18 3 3 8
family Dehalococcoidaceae 43 73 1 1 1 1
family Deinococcaceae 142 438 6 1 1 1 4 4
family Demequinaceae 48 4 1
family Dermabacteraceae 76 146 56 1 4
family Dermacoccaceae 25 5 2 1 1 1
family Dermatophilaceae 6 1
family Dermocarpellaceae 1
family Desulfallaceae Watanabe et al. 2020 181 391 3 1 7 1
family Desulfarculaceae 213 1
family Desulfobacteraceae 581 203 2 2 4 6 2 4
family Desulfobulbaceae 87 10 1 1 1
family Desulfocapsaceae 13 3 1 1
family Desulfohalobiaceae 53 179 7 3
family Desulfomicrobiaceae 225 59 1 6 4
family Desulfonatronaceae 43 212 2
family Desulfovibrionaceae 864 893 646 32 20 12 14 12 10 7 4
family Desulfurellaceae 8 5 1
family Desulfurobacteriaceae 6 1
family Desulfuromonadaceae 102 452 3 5 4
family Devosiaceae 63 306 1 4
family Diapheromeridae 1
family Dictyoglomaceae 65 2 1
family Dientamoebidae 1
family Dietziaceae 120 44 2 1
family Dysgonomonadaceae 621 759 46 4 3 2 6 7 4
family Ectothiorhodospiraceae 220 613 1 3 6 2 4
family Edwardsiidae 36 1
family Eggerthellaceae 954 915 774 35 33 12 14 10 10 7 4
family Egibacteraceae 1
family Egicoccaceae 1
family Elioraeaceae 3
family Elusimicrobiaceae 54 7 7 3 1 1
family Emcibacteraceae 90
family Endomicrobiaceae 1
family Endozoicomonadaceae 4 1
family Enterobacteriaceae 619 897 592 32 29 10 17 12 10 7 4
family Enterococcaceae 316 843 139 28 28 4 11 4 6 4 4
family Entomoplasmataceae 66 414 1 3 2 4
family Eriococcidae 1 11
family Erwiniaceae 332 238 176 4 2 11 1 2 4
family Erysipelotrichaceae 980 927 785 36 32 7 17 8 10 7 4
family Erythrobacteraceae 38 81 2 1 1 4
family Eubacteriaceae 980 926 299 36 33 13 13 11 10 7 4
family Eubacteriales Family XII. Incertae Sedis 512 261 18 3 7 6
family Eubacteriales Family XIII. Incertae Sedis 901 770 656 31 18 4 12 1 10 7 4
family Euzebyaceae 35 493 1 1 1
family Fabaceae 11 266 2 3 1
family Fastidiosibacteraceae 15
family Faucheaceae 10
family Ferrimonadaceae 38 8 1
family Ferrovaceae 2
family Fervidobacteriaceae 11 1 1 4
family Fibrobacteraceae 208 81 140 2 1
family Fimbriimonadaceae 23 2 1
family Flammeovirgaceae 342 202 1 3 1 4
family Flavobacteriaceae 473 818 455 3 1 3 2 4 7 4
family Flexibacteraceae 8 1 2
family Fortieaceae 12
family Francisellaceae 74 36 2 2 1 4
family Frankiaceae 6 1 1 4
family Fulvivirgaceae 147 4 2 1 4
family Fusobacteriaceae 498 429 121 7 4 1 2 4 6 4
family Gaiellaceae 36 2
family Gallionellaceae 30 118 1 2 1
family Geminicoccaceae 29 1
family Gemmataceae 15 7 1 1 1
family Gemmatimonadaceae 25 4 1 1 1
family Geobacteraceae 64 56 1 1 4
family Geodermatophilaceae 102 10 1 1 4
family Gloeobacteraceae 8 1 1
family Gloeotrichiaceae 1
family Glycomycetaceae 127 44 1 1 1
family Gomontiellaceae 89 1 1
family Gomphosphaeriaceae 23
family Gordoniaceae 61 27 1 1 4
family Gottschalkiaceae 127 4 3 4
family Gracilibacteraceae 417 9 3 3 6
family Granulosicoccaceae 71 1
family great apes 1
family Hafniaceae 50 61 14 2 1 1 1
family Hahellaceae 171 96 2 1 3
family Halanaerobiaceae 211 168 1 3 5 2 4
family Halieaceae 59 1 1
family Haliscomenobacteraceae 63 3
family Haloarculaceae 1
family Halobacteriaceae 1 2 1
family Halobacteriaceae Clade I 1
family Halobacteriovoraceae 34 5 1 4
family Halobacteroidaceae 332 41 3 3 4 1
family Haloferacaceae 1 1
family Halomonadaceae 424 328 2 1 4 1 3 4
family Haloplasmataceae 30 1 1
family Halorubraceae 1
family Halothiobacillaceae 94 16 2
family Hapalosiphonaceae 1
family Helicobacteraceae 40 268 3 1 1 1 4
family Heliobacteriaceae 164 393 4 2 3 6 5 1
family Herpetosiphonaceae 3 1
family Heteroleibleiniaceae 8
family Holophagaceae 454 431 2 4
family Holosporaceae 1 3
family Hungateiclostridiaceae 728 596 142 35 7 2 6 8 6 4
family Hydrogenophilaceae 239 438 5 1 1 1
family Hydrogenothermaceae 25 1 1
family Hyellaceae 1
family Hymenobacteraceae 186 636 2 1 4 1 4
family Hyphomicrobiaceae 102 419 1 1 5 4
family Hyphomonadaceae 511 58 1 1 4 3 2
family Iamiaceae 20
family Ichthyobacteriaceae 1
family Idiomarinaceae 24 39 1 1 1
family Ignavibacteriaceae 39 31 1 1
family Ilumatobacteraceae 70
family Immundisolibacteraceae 3
family Intrasporangiaceae 65 38 1 4
family Isosphaeraceae 5 5 1 4
family Jatrophihabitantaceae 6 1
family Jiangellaceae 5 12 1 4
family Jonesiaceae 95 16
family Kaistiaceae 34 10 1
family Kallotenuaceae 13
family Kangiellaceae 29 1
family Kiloniellaceae 412 210 5 1
family Kineosporiaceae 40 11 1 1
family Kofleriaceae 25 67 3
family Kordiimonadaceae 105
family Kosmotogaceae 1 10 1 1
family Kribbellaceae 259 52 5
family Ktedonobacteraceae 1
family Kytococcaceae 1 2 1
family Labilitrichaceae 36
family Lachnospiraceae 980 929 791 36 33 17 18 14 10 7 4
family Lacipirellulaceae 7
family Lactobacillaceae 980 913 813 36 28 12 18 11 10 7 4
family Lawsonellaceae 1
family Legionellaceae 69 591 1 1 4 3 4
family Lentisphaeraceae 4
family Leptolyngbyaceae 2 214 1 1 2 4
family Leptospiraceae 47 260 4 2 4
family Leptotrichiaceae 176 112 38 2 1 1 4
family Leuconostocaceae 896 719 103 9 3 1 2 4 8 6 4
family Lewinellaceae 8 45
family Limnochordaceae 1 1
family Listeriaceae 221 605 1 1 1 4 2 1 4
family Litoricolaceae 29 49 3
family Luteibaculaceae Bowman 2020 1
family Magnetococcaceae 18 1 1
family Maricaulaceae 30 8 1
family Marinifilaceae 252 1 4 4
family Marinilabiliaceae 500 1 7 5 1
family Marinobacteraceae Liao et al. 2020 147 46 1 1 4
family Mariprofundaceae 28 1 1 1
family Marivirgaceae 2 2 1
family Melioribacteraceae 659 16 2 6 4
family Merismopediaceae 3
family Mesoaciditogaceae 4
family Methanobacteriaceae 213 268 220 3 3 4 11 5 1
family Methanococcaceae 1
family Methanocorpusculaceae 1 3 1
family Methanomassiliicoccaceae 28 31 1
family Methanoregulaceae 2
family Methanosarcinaceae 3 4 1
family Methanotrichaceae 1
family Methylacidiphilaceae 9 1 1
family Methylobacteriaceae 52 50 5 1 4
family Methylococcaceae 178 3 1 3 4
family Methylocystaceae 20 11 1 4
family Methylophilaceae 259 401 1 1 2 1
family Methylothermaceae 47
family Microbacteriaceae 553 317 49 2 3 3 5 4
family Microbulbiferaceae 1 3 1 4
family Micrococcaceae 509 366 151 25 22 4 1 4 6 4
family Microcoleaceae 278 200 1 1 4
family Microcystaceae 4 2 1
family Micromonosporaceae 205 270 1 1 1 2 6 4
family Micropepsaceae 11
family Microscillaceae 119 1
family Microviridae 7
family Mooreiaceae 8
family Moraxellaceae 479 469 21 7 2 1 5 3 6 6 4
family Morganellaceae 463 135 17 17 1 2 10 9 7 4
family Moritellaceae 1 1 1
family Motilibacteraceae 5
family Muribaculaceae 2 4
family Mycobacteriaceae 88 160 59 2 1 2 1 4
family Mycoplasmataceae 683 776 11 6 2 6 5 4
family Mycoplasmoidaceae 13
family Myoviridae 1
family Myxococcaceae 4 1 4
family Mzabimycetaceae 131
family Nakamurellaceae 2 1 4
family Nannocystaceae 25 57 1
family Natranaerobiaceae 29 1
family Nautiliaceae 27 3 1 2 1
family Neisseriaceae 173 290 68 10 5 2 3 1 4 7 4
family Neomegalonemataceae 20 1
family Nitratiruptoraceae Waite et al. 2017 1 1
family Nitriliruptoraceae 6 5 2
family Nitrosomonadaceae 313 7 8 4 3 2 4
family Nitrosopumilaceae 2 1
family Nitrososphaeraceae 1 3
family Nitrospinaceae 5 3
family Nitrospiraceae 47 162 1 1 5 4
family Nocardiaceae 11 89 21 1 2 1 4
family Nocardioidaceae 374 126 1 2 6 4
family Nocardiopsaceae 277 1 2 1 4
family Nostocaceae 3 776 2 1 1 7 4
family Oceanospirillaceae 257 218 1 1 4
family Odoribacteraceae 905 871 619 33 25 9 16 12 9 7 4
family Oleiphilaceae 3
family Oligosphaeraceae 37
family Opitutaceae 37 6 3 1 1 4
family Orbaceae 4 1 4
family Ornithinimicrobiaceae 19 23 1 4
family Oscillatoriaceae 101 426 4
family Oscillospiraceae 980 927 788 36 33 17 18 14 10 7 4
family Oxalobacteraceae 447 597 259 25 2 2 8 6 7 4
family Paenibacillaceae 821 726 1 29 4 6 6 7 4
family Paludibacteraceae 128 3 1 3 2 2 1 4
family Parachlamydiaceae 2 2 1
family Parvibaculaceae 2 4
family Parvoviridae 2
family Parvularculaceae 24 1
family Pasteurellaceae 799 762 548 29 15 6 17 4 6 7 4
family Pasteuriaceae 36
family Patulibacteraceae 3 1
family Pectobacteriaceae 402 43 2 1 1 1 3 4
family Pelagibacteraceae 4 1 1
family Peptococcaceae 905 917 521 24 3 6 9 9 7 4
family Peptoniphilaceae 914 900 505 7 8 4 8 10 7 4
family Peptostreptococcaceae 975 827 789 30 32 6 15 5 10 7 4
family Perlucidibacaceae Liao et al. 2020 3
family Persicobacteraceae 69 1 1 4
family Petrotogaceae 6 15 1 6 4
family phages with long non-contractile tails 1
family Phreatobacteraceae 1 1
family Phycisphaeraceae 2 1
family Phyllobacteriaceae 33 11 35 1 1 4
family Pirellulaceae Dedysh et al. 2020 36 3 1
family Piscirickettsiaceae 263 135 2 3 1 4
family Planctomycetaceae 94 6 1 1
family Planococcaceae 796 439 39 22 2 6 10 7 4
family Pleioneaceae 2
family Pleomorphomonadaceae 6 2 1
family Polyangiaceae 3 40 1 1 4
family Porphyromonadaceae 973 927 524 35 19 6 10 10 7 4
family Porticoccaceae 1
family Prevotellaceae 979 914 568 21 12 12 17 10 7 4
family Prochloraceae 2 2 1 4
family Prochlorococcaceae 1
family Prochlorotrichaceae 3 3
family Prolixibacteraceae 135 1 4 1
family Promicromonosporaceae 48 3 1 1 4
family Propionibacteriaceae 393 39 118 13 9 1 4 4 4
family Proteidae 5 1
family Proteinivoraceae 421 721 3 7 7
family Pseudanabaenaceae 2 277 2 4
family Pseudoalteromonadaceae 36 22 1 1 4
family Pseudococcidae 2 20 1
family Pseudomonadaceae 354 218 51 9 2 2 11 2 5 4
family Pseudonocardiaceae 294 251 1 2 4 4
family Pseudoxanthobacteraceae 5
family Psychromonadaceae 23 11 4
family Puniceicoccaceae 347 561 7 1 3 4 1
family Pyrinomonadaceae 37
family Rarobacteraceae 55
family Reichenbachiellaceae 39
family Reyranellaceae 5
family Rhabdochlamydiaceae 68
family Rhizobiaceae 77 228 8 14 1 1 1 7 4
family Rhodanobacteraceae 179 630 1 2 3 4
family Rhodobacteraceae 250 169 4 4 1 1 1 4 7 4
family Rhodobiaceae 7 1 3 4
family Rhodocyclaceae 339 565 70 1 1 1 1
family Rhodospirillaceae 743 758 370 25 1 8 9 7 4
family Rhodothalassiaceae 12 6 1
family Rhodothermaceae 117 854 6 2 6 1 4
family Rhodovibrionaceae 377 190 1 7
family Rickettsiaceae 208 492 1 2 6 4
family Rikenellaceae 966 18 733 35 32 15 18 13 9 7 4
family Rivulariaceae 98 414 6 4
family Robiginitomaculaceae 40 2
family Roseiarcaceae 4
family Roseiflexaceae 9 1 1
family Roseivirgaceae 40
family Roseobacteraceae Pujalte et al. 2014 50 39 1 1 2 4
family Ruaniaceae 1
family Rubricoccaceae 6
family Rubritaleaceae 144 303 3 1
family Rubrobacteraceae 60 7 3 2 3
family Ruminococcaceae 980 929 788 36 26 5 18 14 10 7 4
family Saccharomycetaceae 1 5
family Saccharospirillaceae 383 18 1 1
family Salinibacteraceae 2
family Salinisphaeraceae 15 1
family Salinivirgaceae 1
family Salisaetaceae 104 206 1 3
family Sandaracinaceae 6 1
family Sanguibacteraceae 2 3 1 1
family Saprospiraceae 43 45 1
family Schleiferiaceae 18 1
family Scytonemataceae 2 4
family Sedimentisphaeraceae 1 3
family Segniliparaceae 31 2 1
family Selenomonadaceae 563 914 99 12 5 6 10 7 4
family Shewanellaceae 124 557 2 1 5 4
family Simkaniaceae 6 1
family Sinobacteraceae 130 658 2 1 1 1
family Sneathiellaceae 5
family Solanaceae 11
family Solibacteraceae 1 1 1
family Solirubrobacteraceae 20 10
family Sphaerobacteraceae 25 1
family Sphaerochaetaceae 3 3 1 1
family Sphingobacteriaceae 564 928 4 24 5 4 8 7 4
family Sphingomonadaceae 547 302 17 14 2 1 5 6 4
family Sphingosinicellaceae 8 1 4
family Spirillaceae 3 14
family Spirochaetaceae 110 219 1 3 1 4
family Spiroplasmataceae 333 5 5 4
family Spirosomaceae 560 743 2 3 4 6 4
family Spirulinaceae 9
family Spongiibacteraceae 173 1
family Sporichthyaceae 8 3
family Sporolactobacillaceae 124 281 2 1 1
family Sporomusaceae 663 632 34 3 4 7 4
family Staphylinidae 3
family Staphylococcaceae 287 737 207 3 3 3 5 2 5 5 4
family Stappiaceae 2 1 4
family Stellaceae 176 1
family Steroidobacteraceae 29 9
family Sterolibacteriaceae 62 150 11 1 4
family Streptococcaceae 977 922 774 36 32 12 16 10 10 7 4
family Streptomycetaceae 185 184 2 1 2 6 4
family Streptosporangiaceae 141 348 1 2 1
family Succinivibrionaceae 239 233 15 2 1 3
family Sulfolobaceae 3
family Sulfuricellaceae Watanabe et al. 2014 6 1 1
family Sulfurovaceae Waite et al. 2017 5 1 1
family Sutterellaceae 972 918 713 36 29 12 18 11 10 7 3
family Symbiobacteriaceae 251 551 3 6 3
family Synechococcaceae 7 279 1 1 4
family Synergistaceae 368 691 236 1 1 2 1 6 7 4
family Syntrophaceae 55 151 1 1 1 4
family Syntrophobacteraceae 379 300 2 2 1
family Syntrophomonadaceae 420 763 11 3 3 5 4
family Syntrophorhabdaceae 35 1
family Syntrophotaleaceae 2
family Tannerellaceae 945 922 719 34 33 14 18 12 10 7 4
family Temperatibacteraceae 1
family Tepidamorphaceae 2
family Tepidanaerobacteraceae 10 299 1 2 1
family Terasakiellaceae 1
family Terrimicrobiaceae 4
family Thalassobaculaceae 2 44 1
family Thalassospiraceae 21 210 358 1
family Thermaceae 85 363 1 1 2 5 4
family Thermoactinomycetaceae 458 558 1 4 3 6 4
family Thermoanaerobacteraceae 281 798 212 4 5 4 4
family Thermoanaerobacterales Family III. Incertae Sedis 143 893 1 4 8 7 4
family Thermoanaerobacterales Family IV. Incertae Sedis 21 1
family Thermoanaerobaculaceae 77
family Thermococcaceae 1 2 1
family Thermodesulfobacteriaceae 22 97 2 1
family Thermodesulfobiaceae 52 11 17 5 2 2 1
family Thermodesulfovibrionaceae 14 160 6 3
family Thermoflexaceae 4
family Thermoflexibacteraceae 99
family Thermogemmatisporaceae 7 69 3
family Thermoguttaceae Dedysh et al. 2020 37 1
family Thermohalobacteraceae Spring 2020 736 4 4 7
family Thermoleophilaceae 31 1
family Thermolithobacteraceae 39
family Thermomicrobiaceae 1
family Thermomonosporaceae 59 227 1 1 3 4
family Thermonemataceae 17 3
family Thermoproteaceae 1
family Thermosediminibacteraceae 41 63 6 1
family Thermosporotrichaceae 3
family Thermosynechococcaceae 1
family Thermotogaceae 1 39 1 6 4
family Thermotomaculaceae 14 1
family Thioalkalibacteraceae 1 10
family Thioalkalispiraceae 49 1 3
family Thiobacillaceae 59 135 6 1 1
family Thiofilaceae 2
family Thiolinaceae 2
family Thioprofundaceae 6
family Thiotrichaceae 68 614 1 3 1 3 1
family Thiovulaceae Waite et al. 2017 12 1 1 3
family Thorselliaceae 44
family Tissierellaceae 438 58 1 2 1 4 4 3 4
family Treponemataceae 51 217 1 3 1 4
family Trichocoleusaceae 2
family Trichocomaceae 1
family Tropherymataceae 52 1
family Trueperaceae 12
family Tsukamurellaceae 3 54 1 4
family Turicibacteraceae Verbarg et al. 2014 590 636 474 8 13 6 11 1 7 5 4
family unclassified Actinobacteria (class) (miscellaneous) 1
family unclassified Bacillales 19 40
family unclassified Burkholderiales 199 201 19 15 3 3 4
family unclassified Clostridiales 721 783 35 30 4 1 3 8 4
family unclassified Rickettsiales 4
family Unionidae 123
family Vallitaleaceae Quemeneur et al. 57 3 4 8
family Veillonellaceae 973 928 744 32 29 11 16 6 10 7 4
family Verrucomicrobia subdivision 3 9 8 2
family Verrucomicrobiaceae 172 809 220 3 1 2 3 1
family Vibrionaceae 91 68 7 4 4
family Vicinamibacteraceae 1
family Victivallaceae 250 283 6 2 2 5 5
family Viviparidae 74 1
family Waddliaceae 1 5
family Weeksellaceae 90 23 8 1 1 1 4
family Wenzhouxiangellaceae 33 1
family Woeseiaceae 1
family Xanthobacteraceae 14 22 1 6 1
family Xanthomonadaceae 262 748 19 4 7 4 6 4
family Xenococcaceae 1
family Yersiniaceae 170 688 20 6 4 13 9 4
family Zoogloeaceae 137 227 1 1 1 2 1 3 4
family Zymomonadaceae 1 1 1
forma specialis Buchnera aphidicola (Acyrthosiphon kondoi) 1
forma specialis Buchnera aphidicola (Acyrthosiphon pisum) 2
forma specialis Buchnera aphidicola (Aphis glycines) 1
forma specialis Buchnera aphidicola (Cinara cedri) 1
forma specialis Buchnera aphidicola (Cinara confinis) 1
forma specialis Buchnera aphidicola (Cinara pseudotaxifoliae) 1
forma specialis Buchnera aphidicola (Cinara tujafilina) 1
forma specialis Buchnera aphidicola (Diuraphis noxia) 1
forma specialis Buchnera aphidicola (Myzus persicae) 4
forma specialis Buchnera aphidicola (Schizaphis graminum) 1
forma specialis Buchnera aphidicola (Schlechtendalia chinensis) 1
forma specialis Buchnera aphidicola (Tuberolachnus salignus) 1
forma specialis Buchnera aphidicola (Uroleucon ambrosiae) 1
forma specialis cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 1
forma specialis endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 1
forma specialis primary endosymbiont of Heteropsylla cubana 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans 4
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 3
genus 1
genus 1
genus 1
genus 1
genus 1
genus 'Kouleothrix' 1
genus 'Terrahaemophilus' 1
genus Abiotrophia 110 49 9 2 2 2
genus Absiella 375 400 13 1 6 1
genus Abyssivirga 1
genus Acanthopleuribacter 54
genus Acaryochloris 3
genus Accumulibacter 3
genus Acetanaerobacterium 458 123 1 3 8
genus Acetatifactor 881 2 3 4
genus Acetilactobacillus 3
genus Acetitomaculum 671 138 1 3 3
genus Acetivibrio 902 913 32 26 1 5 8 7 4
genus Acetoanaerobium 524 4 6 1
genus Acetobacter 15 3 1 1 3
genus Acetobacterium 404 910 2 4 6 7 4
genus Acetobacteroides 241
genus Acetohalobium 2 35 1 1
genus Acetomicrobium 32 9 1
genus Acetonema 227 2 2
genus Acholeplasma 631 643 6 1 2 5 3 4
genus Achromatium 10
genus Achromobacter 75 1 9 1 1 2 4
genus Acidaminobacter 256 221 3 5 3
genus Acidaminococcus 505 662 96 4 1 3 5 3 3 4
genus Acidianus 1
genus Acidibacter 48
genus Acidibrevibacterium 1
genus Acidicaldus 1
genus Acidicapsa 58 1
genus Acidiferrobacter 10 3
genus Acidihalobacter 1 1
genus Acidimicrobium 104 1 1
genus Acidiphilium 16 26 1 1
genus Acidipropionibacterium 12 1 1 4
genus Acidisoma 1
genus Acidisphaera 1
genus Aciditerrimonas 121 2
genus Acidithiobacillus 34 1 1
genus Acidobacterium 1 3
genus Acidocella 1 1
genus Acidothermus 42 1
genus Acidovorax 33 48 1 1 1 4 4
genus Acinetobacter 267 197 16 6 2 1 5 3 1 4 4
genus Acrocarpospora 4
genus Actibacter 1
genus Actimicrobium 2
genus Actinoallomurus 2
genus Actinoalloteichus 4
genus Actinobacillus 253 535 90 7 4 1 5 4
genus Actinobaculum 7 66 18 6 2 1
genus Actinocatenispora 75 237 1
genus Actinocorallia 4 3 2
genus Actinokineospora 4 3
genus Actinomadura 33 29 1 2 1
genus Actinomyces 769 681 580 10 28 4 5 9 7 4
genus Actinomycetospora 2 5
genus Actinoplanes 79 8 1 4
genus Actinopolymorpha 1 58 1
genus Actinopolyspora 161 191 4 1
genus Actinosynnema 1
genus Actinotignum 55 13 29 3
genus Acutalibacter 8
genus Adhaeribacter 32
genus Adlercreutzia 675 537 5 24 8 6 1 1 6 1
genus Advenella 5 1 3
genus Aequorivita 9 1 2 1
genus Aeribacillus 24 1 1
genus Aeriscardovia 143
genus Aerococcus 255 22 16 1 2 4
genus Aeromicrobium 3 9 1 3 1
genus Aeromonas 123 7 4 1 1 4
genus Aerosphaera 48
genus Aerosticca Watanabe et al. 2020 3
genus Aestuariibacter 2
genus Aestuariispira 417 2
genus Afipia 1 3
genus Agaribacter 261
genus Agarilytica 1
genus Agarivorans 21 1
genus Agathobacter 1 1
genus Agathobaculum 922 1 8 28 3 9
genus Aggregatibacter 179 257 172 2 3 2 1 4 5 1
genus Aggregicoccus 1
genus Agreia 2
genus Agrilactobacillus 119 3
genus Agrobacterium 34 1 4
genus Agrococcus 2 17 3 1 1
genus Agromyces 77 162 1 2 1 1
genus Ahniella 1
genus Ahrensia 1
genus Akkermansia 947 860 811 36 27 17 18 14 9 4 4
genus Albibacterium 1
genus Albidovulum 1 1
genus Albimonas 2
genus Alcaligenes 13 2 1 3
genus Alcanivorax 10 100 1 1
genus Algibacter 3 2 1
genus Algicola 34
genus Algimonas 12 2
genus Algiphilus 40
genus Algivirga 1
genus Algorimarina 1
genus Algoriphagus 106 1 3
genus Aliarcobacter 3 39 1 1 4
genus Alicycliphilus 1 6 3 1
genus Alicyclobacillus 100 2 3 3 3 3
genus Aliicoccus 1
genus Aliidiomarina 15
genus Aliifodinibius 176
genus Aliihoeflea 1
genus Aliivibrio 1 1
genus Alishewanella 50 152 2
genus Alistipes 966 733 33 32 13 11 13 9 7 4
genus Alkalibacillus 4 56
genus Alkalibacter 81 2 3
genus Alkalibacterium 5 308 1 1 7
genus Alkalibaculum 197 1 2
genus Alkalicoccus 29
genus Alkaliflexus 40 3
genus Alkalihalobacillus 19 12 8 1 3
genus Alkalilimnicola 1
genus Alkalimarinus 16
genus Alkaliphilus 255 912 4 3 5 7 4
genus Alkalispirillum 1
genus Alkalispirochaeta 1
genus Alkalitalea 1
genus Alkanibacter 1
genus Alkanindiges 3 1
genus Allisonella 175 68 3 2
genus Alloactinosynnema 4
genus Allobacillus 2
genus Allobaculum 143 87 8 2 2
genus Allocatelliglobosispora 1
genus Allochromatium 47 1
genus Allofrancisella 6 1
genus Allofustis 21 2 2
genus Allohahella 69 94 2
genus Alloiococcus 69 3 1
genus Allokutzneria 1 1
genus Alloprevotella 385 7 83 2 3 1
genus Alloscardovia 144 57 19 2
genus Allosphingosinicella 14
genus Alsobacter 2
genus Alteracholeplasma 38 21 1 1 1
genus Altererythrobacter 9 2 1 4
genus Alteribacillus 2
genus Alteribacter 13
genus Alterileibacterium 2 5
genus Alterococcus 19 1
genus Alteromonas 20 1 4
genus Altibacter 1
genus Alysiella 4
genus Amaricoccus 3 30 2
genus Amedibacillus 305 603 12 1 1 6 2
genus Aminicella 507 1
genus Aminiphilus 4 82 5
genus Aminipila 1 1 4
genus Aminivibrio 59
genus Aminobacter 1 5 1
genus Aminobacterium 12 41 3 1
genus Aminomonas 45 4
genus Ammonifex 7 304
genus Ammoniphilus 30 39
genus Amoebophilus 2 814 1 5 1
genus Amphibacillus 22 4
genus Amphritea 3 21
genus Amycolatopsis 4 11 1 1 4
genus Amylibacter 3
genus Amylolactobacillus 2
genus Anabaena 1 3
genus Anabaenopsis 1
genus Anaerobacillus 1 213 20
genus Anaerobacter 59
genus Anaerobacterium 26 47 3 1 3
genus Anaerobiospirillum 15 1 2
genus Anaerobium 259 19 1 8
genus Anaerobranca 404 723 1 5 7
genus Anaerobutyricum 908 1 32 28 4 11 8 4
genus Anaerocella 156
genus Anaerococcus 554 406 373 5 1 1 5 7 4
genus Anaerocolumna 773 8 4 4
genus Anaerofilum 496 915 249 8 2 2 10 7
genus Anaerofustis 578 167 203 9 1 6
genus Anaeroglobus 509 14 5
genus Anaerolinea 57 55 4 1 2 1
genus Anaeromassilibacillus 9 6 1
genus Anaeromusa 10 97 2
genus Anaeromyxobacter 563 1 1 1
genus Anaerophaga 10
genus Anaeroplasma 162 86 48 1 1 2
genus Anaerorhabdus 18
genus Anaerosacchariphilus 1 13
genus Anaerosalibacter 198
genus Anaerosinus 14 34 2
genus Anaerosphaera 108 2
genus Anaerospora 155 3
genus Anaerosporobacter 527 550 5 1
genus Anaerostipes 977 818 780 36 33 14 12 12 10 7 4
genus Anaerotaenia 3 1
genus Anaerotignum 898 21 5 4 3 9 4
genus Anaerotruncus 796 894 730 29 19 5 7 10 7
genus Anaerovibrio 7 822 9 1 3 7 1
genus Anaerovorax 29 276 13 1 2
genus Anaplasma 7 1
genus Ancylobacter 6
genus Anderseniella 1 4
genus Andreesenia 7
genus Andreprevotia 1
genus Aneurinibacillus 40 3 1 1
genus Angelakisella 21 4
genus Annandia 2
genus Annwoodia 1
genus Anoxybacillus 36 55 3 1 1 1 1 1
genus Anoxybacter 1 1 4
genus Anoxynatronum 602 3
genus Anseongella 1
genus Antarctobacter 1
genus Apibacter 1 1
genus Apilactobacillus 6 3
genus Aquabacterium 46 5 5 1 1
genus Aquamicrobium 11
genus Aquaspirillum 28
genus Aquibacter 7 1
genus Aquicella 9
genus Aquiflexum 11 1
genus Aquihabitans 15
genus Aquiluna 1
genus Aquimarina 19 4 1 4
genus Aquimonas 18 6
genus Aquincola 9
genus Aquipuribacter 4
genus Aquirhabdus 1
genus Aquisalibacillus 1
genus Aquisalimonas 60
genus Aquisphaera 2
genus Aquitalea 2 11 1 4
genus Arabia 1 1 1
genus Arachidicoccus 1 3
genus Arachnia 1 1 2 1
genus Arcanobacterium 26 30 31 1 1 2
genus Archaeoglobus 1
genus Archangium 10 1
genus Arcicella 87 2
genus Arcobacter 20 59 1 1 1 4
genus Arcobacter group 18 48 1 1 1 4
genus Arcticibacterium 1
genus Ardenticatena 11 2
genus Arenibacter 1 3 3
genus Arenimonas 33 5
genus Arhodomonas 11
genus Aridibacter 18
genus Armatimonas 1
genus Aromatoleum 1
genus Arsenicicoccus 1
genus Arsenophonus 28 21 1
genus Arthrobacter 4 125 10 1 1 2 1 4
genus Arthromitus 1 4
genus Arthronema 4
genus Arthrospira 4 10 1 1
genus Asaccharobacter 11 1 7
genus Asaccharospora 99 1
genus Asaia 4 1
genus Asinibacterium 10
genus Aspergillus 1 1
genus Asteroleplasma 236 73 1 3
genus Asticcacaulis 50 355 1 1
genus Atelocyanobacterium 1
genus Atlantibacter 1
genus Atopobacter 4
genus Atopobium 317 311 98 3 2 4 3 1
genus Atopococcus 13
genus Atopomonas 5
genus Atopostipes 56 2
genus Aurantiacibacter 9 1
genus Aurantimicrobium 1
genus Aurantimonas 8
genus Auraticoccus 3 3
genus Aureibacter 4
genus Aureicoccus 1
genus Aureimonas 12 1
genus Aureispira 1
genus Aureitalea 3
genus Auricoccus 1
genus Auritidibacter 1
genus Austwickia 1
genus Avibacterium 61 94 2 4 1
genus Azoarcus 4 63 1 1 1
genus Azohydromonas 2 8
genus Azomonas 2
genus Azonexus 19 1
genus Azorhizobium 2 5
genus Azorhizophilus 2
genus Azospira 3 1 9 1 1
genus Azospirillum 292 168 2 1 3 6 2 4
genus Azotobacter 4 1
genus Babela 2
genus Bacillus 6 7 1 1
genus Bacillus 421 599 66 27 1 2 8 7 6 4
genus Bacteria 1
genus Bacterioplanes 1 1
genus Bacteriovorax 29 6 1
genus Bacteroides 980 929 784 35 33 16 18 14 10 7 4
genus Baia 73
genus Balneatrix 11
genus Balneola 176 49
genus Bariatricus 1 3
genus Barnesiella 794 412 4 14 6 2 5 8 4
genus Barrientosiimonas 23
genus Bartonella 11 31 1 4
genus Basfia 3 1 1
genus Basilea 3 1
genus Bdellovibrio 9 12 1 1 1 1
genus Beduini 1 1
genus Beggiatoa 1 1
genus Beijerinckia 2 1
genus Belliella 17 3
genus Bellilinea 3
genus Belnapia 2 1
genus Bergeyella 14 5
genus Bernardetia 80 1
genus Berryella Wylensek et al. 2020 3 1 1
genus Beutenbergia 1
genus Bibersteinia 2 1 1
genus Bifidobacterium 980 923 813 36 33 15 18 11 10 6 4
genus Bigelowiella 2 2
genus Bilophila 3 841 605 32 20 12 14 11 10 7
genus Biomaibacter 1
genus Biostraticola 26
genus Bisgaardia 58 1
genus Bittarella 8 5 1
genus Bizionia 2
genus Blastocatella 1
genus Blastochloris 5 1
genus Blastococcus 1 3 1 1
genus Blastocystis 2
genus Blastomonas 6 1
genus Blastopirellula 17
genus Blattabacterium 1 4
genus Blautia 980 929 789 36 32 15 18 14 10 7 4
genus Blochmannia 248 6 4
genus Bogoriella 8
genus Bombilactobacillus 85
genus Bombiscardovia 12 10
genus Bordetella 41 1 4
genus Borrelia 2 13 4
genus Borreliella 4
genus Bosea 7 1 1 4
genus Bosea 3
genus Boseongicola 2
genus Boudabousia 18
genus Bounagaea 1
genus Bowdeniella 18
genus Bowmanella 57
genus Brachybacterium 18 131 5 1 1
genus Brachymonas 3
genus Brachyspira 22 13 1 4
genus Brackiella 15
genus Bradymonas 1
genus Bradyrhizobium 2 23 11 1 1 4
genus Brassicibacter 661 4 3 4
genus Brenneria 364 30 1 3 1
genus Breoghania 1
genus Brevefilum 1
genus Brevibacillus 68 91 1 1 1 4
genus Brevibacterium 89 63 60 1 1 7 4
genus Brevifollis 9
genus Brevinema 5 1
genus Brevirhabdus 1
genus Brevundimonas 36 18 7 1 3 2 4
genus Breznakia 3
genus Breznakibacter 16 2
genus Brochothrix 9 537 1 1 1 1
genus Brockia 18
genus Brucella 1 11 4 1 2
genus Bruchidius 4
genus Bryobacter 18
genus Buchnera 1 4
genus Bulleidia 51 174 2 2 5
genus Burkholderia 31 263 1 11 1 1 5 4
genus Buttiauxella 117 1
genus Butyribacter 1 1
genus Butyricicoccus 557 78 34 30 4 1 11 7
genus Butyricimonas 806 732 455 29 11 5 15 6 8 7 4
genus Butyrivibrio 954 615 416 28 28 6 3 8 7 4
genus Bythopirellula 7
genus Caballeronia 16 4
genus Caedibacter 3
genus Caenispirillum 18
genus Caldalkalibacillus 120 2
genus Caldanaerobacter 105 38 1 1 1
genus Caldanaerobius 34 3
genus Caldanaerovirga 3
genus Caldibacillus 1 1 3
genus Caldicellulosiruptor 72 833 1 4 8 6 4
genus Caldicoprobacter 32 119
genus Caldilinea 8 293 7 3
genus Caldimicrobium 2 1
genus Caldimonas 15
genus Caldinitratiruptor 245 6
genus Caldisalinibacter 419 1
genus Caldisericum 5 1
genus Calditerricola 2
genus Calditerrivibrio 3 1
genus Caldithrix 4 185 7 1
genus Calochaete 12
genus Caloramator 638 909 1 9 2 5 8 7
genus Caloranaerobacter 2 6
genus Caloribacterium 12
genus Calothrix 98 377 6 4
genus Camelimonas 3
genus Caminibacter 1 1 2
genus Caminicella 595 16 2
genus Campylobacter 363 335 263 7 3 2 7 5 7 4
genus Candidatus Azobacteroides 60 4
genus Candidatus Desulforudis 1
genus Candidatus Methanoregula Brauer et al. 2006 1
genus Candidatus Nitrosoglobus 1
genus Candidatus Tenderia Eddie et al. 2016 1
genus Candidatus Velamenicoccus Kizina et al. 2022 1
genus Candidatus Viadribacter Braun and Szewzyk 2016 4
genus Candidatus Walczuchella 1
genus Candidimonas 1
genus Canicola 53
genus Canis 1
genus Capnocytophaga 11 12 2 1 1 1 4
genus Caproiciproducens 1 29 1 8 4
genus Carboxydocella 24 510 4 3 2 1
genus Carboxydothermus 11 4
genus Carboxylicivirga 238 1 1
genus Cardinium 1
genus Cardiobacterium 104 17 2 1
genus Carnimonas 16
genus Carnobacterium 4 37 8 1 1 2 4
genus Carsonella 1
genus Casaltella 610 3 5
genus Castellaniella 1
genus Catabacter 129 97 1 1 8 6
genus Catellatispora 1
genus Catellicoccus 1
genus Catenibacterium 318 291 292 12 2 8 2 2
genus Catenisphaera 73 1 2
genus Catenovulum 1 1
genus Catenulispora 3 4
genus Catonella 947 686 1 16 1 3 5 4
genus Caulobacter 15 7 1 1 4
genus Cecembia 13
genus Cedecea 91 1
genus Celeribacter 3
genus Celerinatantimonas 6
genus Cellulomonas 73 12 4 1 4
genus Cellulophaga 4 2 4
genus Cellulosibacter 78
genus Cellulosilyticum 900 15 2 1 9 4
genus Cellulosimicrobium 2 1 1
genus Cellvibrio 33 6 1 3
genus Centipeda 6
genus Cerasicoccus 189 235 1 2 1
genus Cereibacter 9 1 2
genus Cesiribacter 31
genus Cetobacterium 49 51 4 2 1
genus Chamaesiphon 5 3
genus Chania 10 3
genus Chelativorans 6 1
genus Chelatococcus 2 1
genus Chelonobacter 1 23 1
genus Chiayiivirga 1
genus Chishuiella 5
genus Chitinilyticum 3
genus Chitinimonas 20 1
genus Chitinispirillum 13 2
genus Chitinivibrio 2
genus Chitinivorax 11
genus Chitinophaga 31 27 3 1 4
genus Chlamydia 2 1 1 1
genus Chloracidobacterium 14 3
genus Chlorobaculum 3 749 1 1 2 4
genus Chlorobium 3 1 1
genus Chloroflexus 1 1
genus Chlorogloeopsis 9
genus Chloroherpeton 19 6
genus Chondrocystis 1
genus Chondromyces 1 40
genus Christensenella 216 179 16 26 2 2 9 7 4
genus Chromatium 2 204
genus Chromobacterium 9 86 1 1 4
genus Chromohalobacter 1 1
genus Chroococcidiopsis 1 1 1
genus Chroococcus 1 382 2
genus Chryseobacterium 40 70 2 1 1 6 4
genus Chryseolinea 28 4
genus Chryseomicrobium 18 2
genus Chthoniobacter 12 18
genus Chthonomonas 97 4 3
genus Citreitalea 1
genus Citricoccus 1 1
genus Citrifermentans 8 2
genus Citrobacter 15 169 55 17 7 2 4 9 3 4
genus Citromicrobium 3
genus Clavibacter 1 4
genus Cloacibacillus 122 73 106 1 1 1 1
genus Cloacibacterium 16 2 1 1 3
genus Cloacimonas 1
genus Clostridiisalibacter 6
genus Clostridioides 80 488 3 32 4 5 6 4
genus Clostridium 973 928 778 35 32 15 17 1 10 7 4
genus Cnuella 3
genus Cobetia 1
genus Cocleimonas 2
genus Coenonia 2
genus Cognaticolwellia Liu et al. 2020 1
genus Cohaesibacter 1 1
genus Cohnella 48 308 3 3 7 4
genus Coleofasciculus 1
genus Colidextribacter 1 23 8
genus Collimonas 31 5 1 4
genus Collinsella 845 752 770 32 21 9 14 6 7 4
genus Colwellia 28 1 4
genus Comamonas 35 73 22 1 8 1 3
genus Commensalibacter 2
genus Companilactobacillus 108 119 1 1 1 4
genus Conchiformibius 1 2
genus Conexibacter 8 6
genus Confluentimicrobium 1
genus Congregibacter 4
genus Contubernalis 116 5
genus Coprobacillus 473 904 154 5 25 5 3 2 7
genus Coprobacter 594 337 9 10 1 4
genus Coprococcus 979 927 2 31 32 15 17 2 10 7
genus Coprothermobacter 45 11 7
genus Coraliomargarita 67 272 1
genus Corallibacter 1
genus Corallococcus 4
genus Coriobacterium 15 83 2 1 3
genus Corticibacter 4
genus Corynebacterium 562 452 445 8 12 2 7 8 1 4
genus Couchioplanes 9 1
genus Coxiella 19 1
genus Crassaminicella 1
genus Craurococcus 2
genus Crenothrix 1
genus Criblamydia 43
genus Crinalium 1 1
genus Croceibacter 5 1
genus Croceibacterium 1
genus Croceicoccus 1
genus Cronobacter 76 83 2 1 4
genus Cruoricaptor 49 1
genus Cryobacterium 2 11 1
genus Cryomorpha 84
genus Cryptanaerobacter 1
genus Cryptobacterium 321 1 1 3 1
genus Cryptococcus 13
genus Cryptosporangium 1
genus Cryptosporidium 1
genus Cucumibacter 2
genus Culturomica 7
genus Cuneatibacter 9
genus Cupidesulfovibrio 13 3
genus Cupriavidus 48 8 1 1 1 4
genus Curtobacterium 7 1 1 1
genus Curvibacter 7 30 6 1 2
genus Cutibacterium 10 5 29 1 1 1
genus Cyanobacterium 29 147 1
genus Cyanobium 4 1 1 1
genus Cyanothece 1
genus Cyclobacterium 53 4
genus Cycloclasticus 20 9 1 1
genus Cyclonatronum 3
genus Cylindrospermum 1
genus Cystobacter 33 26 1
genus Cytobacillus 66 1 1 4
genus Cytophaga 55 2 1
genus Dactylococcopsis 3
genus Dactylosporangium 1 12
genus Dasania 21
genus Dechloromonas 9 87 1
genus Deefgea 6 1
genus Deferribacter 35 112 4 4
genus Deferrisoma 24 1
genus Defluviicoccus 8
genus Defluviimonas 3 1
genus Defluviitalea 187 2 3 2
genus Defluviitoga 3 1
genus Dehalobacter 187 3 1 4
genus Dehalobacterium 1 369 9 2 7 3 1
genus Dehalococcoides 43 1 1 1 1 1
genus Dehalogenimonas 154 73 4
genus Deinococcus 142 438 6 1 1 1 4 4
genus Delftia 7 18 64 3
genus Dellaglioa 83 11
genus Demequina 47 5 1
genus Dendrosporobacter 41
genus Denitratisoma 11 118 1
genus Denitrobacter 2
genus Denitrobacterium 1 6 1 1
genus Denitrovibrio 3
genus Dependoparvovirus 2
genus Dermabacter 59 23 53 1
genus Dermacoccus 1 4 1 1
genus Derxia 38
genus Desemzia 202 2
genus Desertibacter 5
genus Deserticella 8
genus Desmospora 5
genus Desulfacinum 2 41
genus Desulfallas 29 3 1
genus Desulfarculus 124 1
genus Desulfatibacillum 3 1 1
genus Desulfatiferula 17
genus Desulfatiglans 11
genus Desulfatirhabdium 1
genus Desulfatitalea 8
genus Desulfitibacter 85 3 1 2 1
genus Desulfitispora 33 1
genus Desulfitobacterium 96 172 1 1 3 4
genus Desulfobacca 23 1 1
genus Desulfobacter 14 70 1 2 3
genus Desulfobacterium 295 1 1 1
genus Desulfobacula 3
genus Desulfobaculum 12
genus Desulfobotulus 6
genus Desulfobulbus 68 5 1 1
genus Desulfocapsa 2 1 1
genus Desulfocarbo 127
genus Desulfocella 275 1 2 5
genus Desulfococcus 3 2 1 4
genus Desulfoconvexum 1
genus Desulfocurvibacter 1 1
genus Desulfocurvus 2
genus Desulfofaba 38 3
genus Desulfofarcimen 225 25 1 4
genus Desulfofrigus 45 88
genus Desulfofundulus 81 139 1
genus Desulfofustis 9
genus Desulfoglaeba 242
genus Desulfohalobium 3 3
genus Desulfohalophilus 1
genus Desulfohalotomaculum 677 89 1 1
genus Desulfohalovibrio 76 2
genus Desulfomicrobium 213 59 1 6 4
genus Desulfomonile 13 150 1 1
genus Desulfonatronobacter 4
genus Desulfonatronovibrio 7 133 2
genus Desulfonatronum 43 212 2
genus Desulfonauticus 25 61 7
genus Desulfonema 23 2
genus Desulfonispora 91
genus Desulfopila 1 1
genus Desulfoplanes 18
genus Desulforegula 68 2
genus Desulforhabdus 1
genus Desulfosalsimonas 2
genus Desulfosarcina 20 50 1
genus Desulfoscipio Watanabe et al. 2020 7 1 1
genus Desulfosoma 127 2
genus Desulfosporosinus 187 413 1 1 1 3 7 4
genus Desulfotalea 1 2
genus Desulfothermus 11
genus Desulfotignum 1
genus Desulfotomaculum 781 488 2 9 3 2 7 7 4
genus Desulfovibrio 853 757 381 20 9 6 10 6 9 7 4
genus Desulfovirga 25
genus Desulfurella 6 5 1
genus Desulfuribacillus 7 1
genus Desulfurispira 3
genus Desulfurispirillum 170 1 1
genus Desulfurispora 535 473 2 1 2
genus Desulfurivibrio 2 1
genus Desulfurobacterium 4 1
genus Desulfuromonas 52 46 2 1
genus Desulfuromusa 3 429 1 5
genus Dethiobacter 8 39 1 2 2 1
genus Dethiosulfatibacter 266 2
genus Dethiosulfovibrio 91 510 1 1 6
genus Devosia 60 308 1 4
genus Devriesea 1
genus Dialister 869 601 475 10 11 6 14 4 8 5 4
genus Diaphorobacter 5 5 1 1
genus Dichelobacter 1 1
genus Dichotomicrobium 9
genus Dickeya 38 19 1 1 4
genus Dictyoglomus 65 2 1
genus Dielma 533 307 9 15 1 6
genus Dientamoeba 1
genus Dietzia 120 44 1 1
genus Dinoroseobacter 1
genus Diplorickettsia 13
genus Dispar 1
genus Dissulfuribacter 10
genus Dokdonella 30 357 1 1 1
genus Dokdonia 21 4
genus Dolichospermum 1 602 7 1
genus Dolosicoccus 7 1
genus Dolosigranulum 172 1
genus Dongia 159 2
genus Dorea 972 921 779 35 33 17 18 12 9 7
genus Draconibacterium 31 1
genus Drancourtella 3 9
genus Duganella 3 1
genus Duncaniella 1 4
genus Duodenibacillus 7 1 1
genus Dyadobacter 64 251 1 4 4
genus Dyella 7 1 1
genus Dysgonomonas 631 761 10 4 3 2 6 7
genus Dysosmobacter 9 1
genus Echinicola 52 1 4
genus Ectobacillus 24 2
genus Ectothiorhodosinus 5
genus Ectothiorhodospira 42 169 1
genus Edaphobacter 104 1
genus Edwardsiella 28 61 1
genus Edwardsiella 36 1
genus Effusibacillus 170 5
genus Eggerthella 794 682 575 24 32 5 8 4 9 6 4
genus Eggerthia 341 1 1
genus Egibacter 1
genus Egicoccus 1
genus Ehrlichia 8 231 1 2 1
genus Eikenella 6 2 5 1 2 1
genus Eionea 1
genus Eisenbergiella 735 518 24 3 3 6 9 6
genus Eisenibacter 118
genus Ekhidna 1
genus Elioraea 3
genus Elizabethkingia 21 4 1 4
genus Elstera 3
genus Elusimicrobium 54 7 7 1 1
genus Emcibacter 103
genus Emergencia 2 1 9
genus Empedobacter 8 1
genus Emticicia 143 654 2 1 2 5
genus Endobacter 1
genus Endobugula 52
genus Endolissoclinum 1
genus Endomicrobium 1
genus Endozoicomonas 3 1
genus Enhydrobacter 16
genus Enorma 87 68 3 2 1
genus Ensifer 3 1 1
genus Enterobacter 54 382 208 9 8 2 15 5 7 4
genus Enterocloster 877 2 33 29 4 3 9 4
genus Enterococcus 167 738 137 27 28 3 9 4 4 4 4
genus Enterorhabdus 286 263 7 11 7 1
genus Enteroscipio 2
genus Enterovibrio 1
genus Entomomonas 1
genus Entomoplasma 18 5 2 4
genus Epibacterium 1
genus Epilithonimonas 3 4 1
genus Epulopiscium 59 3 1
genus Ercella 248
genus Ereboglobus 3
genus Eremococcus 24 21 1
genus Eremococcus 1 11
genus Erwinia 167 238 1 1 2 11 1 2 4
genus Erysipelatoclostridium 976 756 35 29 4 8 9 7 4
genus Erysipelothrix 592 772 3 5 4 7 3
genus Erythrobacter 14 75 1 1 1
genus Erythromicrobium 9
genus Escherichia 60 750 1 11 26 7 1 5 1 6 4
genus Ethanoligenens 783 436 4 9 4
genus Eubacterium 980 886 151 36 33 12 13 11 9 7 4
genus Eudoraea 51
genus Euryhalocaulis 8
genus Euzebya 35 493 1 1 1
genus Euzebyella 1
genus Evansella 1
genus Evtepia 10 3
genus Exiguobacterium 27 18 1 3 4
genus Exophiala 1
genus Extensimonas 1
genus Extibacter 6
genus Ezakiella 254 3 2 1
genus Fabibacter 6
genus Facklamia 729 87 50 2 1 5
genus Faecalibacterium 979 929 772 35 33 14 18 4 1 7 4
genus Faecalibaculum 1 1
genus Faecalicatena 570 21 1
genus Faecalicoccus 597 3 1 3 5
genus Faecalimonas 1
genus Faecalitalea 112 81 18 17 1 4
genus Falcatimonas 1 14 1
genus Falsiporphyromonas 237 2
genus Falsirhodobacter 1
genus Fangia 12
genus Fannyhessea 141 2
genus Fastidiosipila 78 75 1 1 3
genus Fenollaria 491 4 2 5
genus Fermentimonas 1 4
genus Ferrimicrobium 2 10 1
genus Ferrimonas 36 8 1
genus Ferrithrix 143
genus Ferrovibrio 2
genus Ferrovum 2
genus Ferruginibacter 55
genus Fervidicella 7
genus Fervidobacterium 11 1 4
genus Fibrella 1 3
genus Fibrobacter 204 81 85 2 1
genus Fictibacillus 32 1 4
genus Filifactor 328 262 18 1 1 3
genus Filimonas 4
genus Filomicrobium 1
genus Fimbriimonas 23 2 1
genus Finegoldia 711 468 443 5 3 2 4 7 1 3
genus Fischerella 1
genus Flagellimonas 1 1
genus Flammeovirga 25 201 1 1 4
genus Flaviaesturariibacter 1
genus Flavicella 4
genus Flaviflexus 21 1 3
genus Flavihumibacter 3
genus Flavilitoribacter 7
genus Flavisolibacter 1 14 1 1 1 4
genus Flavitalea 9
genus Flavivirga 1
genus Flavobacterium 38 37 394 1 7 4
genus Flavonifractor 952 768 31 32 5 1 9 7 4
genus Flectobacillus 75
genus Flexibacter 8 1 2
genus Flexispira Bryner 1987 1
genus Flexistipes 57 1
genus Flexithrix 11
genus Flintibacter 25 2 8
genus Fluoribacter 1
genus Fluviicola 17 3 1 1
genus Fluviimonas 379 1
genus Fluviispira 3
genus Fodinibius 3 2
genus Fodinicurvata 383 1 7
genus Fontibacter 30
genus Fonticella 110 2
genus Formosa 1 4
genus Fournierella 1 16 3 1
genus Francisella 58 36 2 2 1 4
genus Franconibacter 10
genus Frankia 1 1 4
genus Frateuria 3 1
genus Frederiksenia 2 1
genus Fretibacter 14
genus Fretibacterium 4 98 1
genus Friedmanniella 25 12 1 1
genus Frigoribacterium 1
genus Frischella 2 1 3
genus Frisingicoccus 7
genus Frondihabitans 1
genus Fructilactobacillus 69 46 1 1 1
genus Fructobacillus 30 50
genus Fuchsiella 9 1
genus Fucophilus 2
genus Fulvibacter 1
genus Fulvimarina 1
genus Fulvitalea 54
genus Fulvivirga 86 4
genus Furfurilactobacillus 32 382 1 1
genus Fuscovulum Suresh et al. 2019 1 3
genus Fusibacter 168 63 5 6
genus Fusicatenibacter 965 760 17 3 1 11
genus Fusobacterium 473 407 121 5 4 1 2 4 6 4
genus Gabonibacter 10 1 2
genus Gaetbulibacter 1
genus Gaiella 36 2
genus Galenea 37 2
genus Gallaecimonas 3
genus Gallibacterium 51 22 1 1 1 1
genus Gallicola 53 70 1
genus Gallionella 24 118 2 1
genus Garciella 12 2
genus Gardnerella 136 54 40 1 1 2 1
genus Garicola 2
genus Garritya 2
genus Gelria 2 211 2
genus Gemella 533 853 153 3 17 5 6 6 4
genus Geminicoccus 42 1
genus Geminisphaera 9
genus Geminocystis 1
genus Gemmata 12 7 1 1
genus Gemmatimonas 17 4 1
genus Gemmatirosa 7 1
genus Gemmiger 889 16 10 6 8
genus Gemmobacter 2 1 4
genus Geoalkalibacter 11 1
genus Geobacillus 46 302 7 11 1 1 1 3 1
genus Geobacter 45 56 1 1 4
genus Geodermatophilus 6 3 1 2
genus Geofilum 99
genus Geomicrobium 15
genus Geopsychrobacter 6
genus Georgenia 34 7
genus Georhizobium 1
genus Geosporobacter 2 4
genus Geothermobacter 2
genus Geothermomicrobium 2
genus Geothrix 353 431 2 2
genus Geovibrio 1 9 3
genus Gibbsiella 4
genus Giesbergeria 1 6
genus Gilliamella 1
genus Gillisia 23 556 1 1
genus Gilvimarinus 1
genus Gimesia 2
genus Glaciecola 60 133 3
genus Glaciimonas 2
genus Glaesserella 3 1 1
genus Gleimia 32 24 1
genus Globicatella 18 2 1
genus Gloeobacter 8 1 1
genus Gloeothece 1
genus Gloeotrichia 1
genus Glomeribacter 2 385 3
genus Gluconacetobacter 7 3 1
genus Gluconobacter 3 66 1 1
genus Glutamicibacter 52 85 1
genus Glycocaulis 1 1
genus Glycomyces 9 44 1
genus Gorbachella 1 1 1
genus Gordonia 60 27 1 1 4
genus Gordonibacter 532 458 24 24 1 1 7 1
genus Gottschalkia 144 4 3 4
genus Gracilibacillus 108 1
genus Gracilibacter 417 3 2 3 5
genus Gracilimonas 265 2 3
genus Gramella 2 46 1 6 4
genus Granulibacter 4
genus Granulicatella 136 428 319 12 2 3 5 5
genus Granulicella 13 55 1
genus Granulosicoccus 69 1
genus Gryllotalpicola 7 1
genus Gudongella 1 1
genus Guggenheimella 335 2 5
genus Gulbenkiania 4
genus Gullanella 2
genus Gulosibacter 4 32 29 1
genus Guyparkeria 1 10
genus Gynuella 36 1
genus Haematobacter 3
genus Haematospirillum 2
genus Haemophilus 735 703 528 21 15 5 17 4 4 6 4
genus Hafnia 14 2 1 1
genus Hahella 167 96 1 3
genus Halanaerobacter 3 7 4
genus Halanaerobaculum 6
genus Halanaerobium 11 168 1 1 2 4
genus Halarcobacter 9 1 2
genus Halarsenatibacter 68
genus Haliangium 22 67 3
genus Haliea 7
genus Halioglobus 1 1
genus Haliscomenobacter 54 3
genus Halobacillus 24 1 4
genus Halobacteriovorax 34 5 1 4
genus Halobacteroides 6 1
genus Halobaculum 1
genus Halocella 4 1 4
genus Halochromatium 170 52 2
genus Halodesulfovibrio 5
genus Haloferax 1
genus Haloferula 31 2
genus Haloglycomyces 1
genus Halolactibacillus 6
genus Halomicroarcula 1
genus Halomicronema 1 3
genus Halomonas 387 90 1 1 3 1 3 4
genus Halonatronum 5
genus Haloplasma 30 1 1
genus Halopolyspora 132 2
genus Halopseudomonas 7
genus Halorhodospira 78 21 1 2 1
genus Halospina 8
genus Halospirulina 1
genus Halotalea 1
genus Halothermothrix 140 2 4 1
genus Halothiobacillus 43 15 2
genus Haploplasma 21 40 1 2 2 3
genus Harryflintia 4
genus Hartmannibacter 1
genus Hathewaya 487 911 4 2 7
genus Hazenella 15
genus Helcococcus 146 66 20
genus Helicobacter 28 266 3 1 1 1 4
genus Heliimonas 6
genus Heliobacterium 3 1 1 3 3 1
genus Heliomicrobium 1 1 1
genus Heliomonas 1 1
genus Heliophilum 5 2
genus Heliorestis 9 315 3 5
genus Heliothrix 1
genus Hellea 9
genus Henriciella 389 4
genus Hepatoplasma 1
genus Hephaestia 2
genus Herbaspirillum 49 360 251 13 2 3 3 4
genus Herbinix 340 6 2 5 4
genus Herminiimonas 180 34 2 4
genus Herpetosiphon 3 1
genus Hespellia 942 499 15 1 9
genus Heyndrickxia 1 1
genus Hippea 2 1
genus Hirschia 1
genus Histophilus 19 1 1
genus Hoeflea 1
genus Holdemanella 549 498 2 17 2 5 6
genus Holdemania 824 786 565 23 26 4 9 10 7
genus Holophaga 10 2
genus Holospora 1
genus Holzapfelia 48
genus Homo 1
genus Hoppeia 1
genus Howardella 675 124 2 2 2
genus Hoyosella 26
genus Hugenholtzia 32 2
genus Humibacter 18
genus Hungateiclostridium 563 594 2 4 1 7 6 4
genus Hungatella 926 32 31 4 4 9 7
genus Hwangdonia 11
genus Hydrocarboniphaga 1 654 1
genus Hydrocoleum 9
genus Hydrogenibacillus 72 4 2 3
genus Hydrogenispora 458
genus Hydrogenoanaerobacterium 773 224 2
genus Hydrogenobacter 3 1 3
genus Hydrogenobaculum 1 7 2 3 1
genus Hydrogenophaga 12 20 1 1 1
genus Hydrogenophilus 211 393 3 1 1
genus Hydrogenothermus 21
genus Hydrogenovibrio 18 23 1
genus Hydrotalea 14
genus Hylemonella 1
genus Hymenobacter 38 558 1 1 4
genus Hyphomicrobium 17 96 1 4 4
genus Hyphomonas 10 50 3 2
genus Iamia 5
genus Ianmoorea 3
genus Ichthyobacterium 1
genus Ideonella 2
genus Idiomarina 8 39 1 1
genus Ignatzschineria 6 1
genus Ignavibacterium 39 31 1
genus Ignavigranum 81 2
genus Ihubacter 28 9
genus Ileibacterium 3
genus Ilumatobacter 70
genus Ilyobacter 4
genus Immundisolibacter 3
genus Imperialibacter 15
genus Imtechella 1 1
genus Indibacter 22
genus Indioceanicola 3
genus Inquilinus 11 6
genus Insolitispirillum 179 549 6
genus Intestinibacillus 8 7
genus Intestinibacter 795 770 19 24 3 8
genus Intestinibaculum Kim et al. 2019 1 4
genus Intestinimonas 924 721 34 28 5 1 9 4
genus Intrasporangium 2
genus Iodobacter 7 3
genus Ishikawaella 1
genus Isochromatium 5
genus Izimaplasma 1
genus Jahnia Reichenbach 2005 1
genus Janibacter 2 1
genus Jannaschia 1 2 1
genus Janthinobacterium 6 30 3 4
genus Jatrophihabitans 6 1
genus Jeotgalibaca 1 3
genus Jeotgalibacillus 6 1 1
genus Jeotgalicoccus 59 9 1 1
genus Jiangella 1 12 1 4
genus Jinshanibacter 3
genus Johnsonella 647 897 10 11 1 2 7
genus Jonesia 95 16
genus Jonquetella 95 10 1
genus Kaistella 1 3
genus Kaistia 34 10 1
genus Kallipyga 58 1 1
genus Kallotenue 13
genus Kandleria 156 2
genus Kangiella 27 1
genus Kastovskya 2
genus Keratinibaculum 8
genus Ketobacter 1
genus Ketogulonicigenium 3 1
genus Kiloniella 42 3 1
genus Kineococcus 5 3 1
genus Kineosporia 1 5
genus Kinetoplastibacterium 4
genus Kingella 4 5 2 1
genus Kistimonas 1
genus Kitasatospora 8 26 1 5 4
genus Klebsiella 68 266 144 7 15 5 12 11 9 5 4
genus Kluyvera 10 536 4 1 7
genus Knoellia 1
genus Kocuria 25 25 6 1 1 1 4
genus Kofleria 2
genus Komagataeibacter 28 1 3
genus Kordia 1 1
genus Kordiimonas 2
genus Koribacter 4 1
genus Kosakonia 252 25 4 3
genus Kosmotoga 1 10 1
genus Kozakia 1 3
genus Kribbella 282 52 5
genus Kroppenstedtia 3 1 1
genus Ktedonobacter 1
genus Kurthia 1 3
genus Kushneria 3 202 2 1
genus Kutzneria 1
genus Kyrpidia 96 1
genus Kytococcus 1 2 1
genus Labilibacter 4
genus Labilibaculum 1 4
genus Labilithrix 36
genus Labrenzia 1 1
genus Labrys 4 6
genus Laceyella 5 30 1
genus Lachnoanaerobaculum 954 12 3 2 6 4
genus Lachnobacterium 669 854 12 28 1 6 8 8 4
genus Lachnoclostridium 978 2 36 31 5 10 9 3 4
genus Lachnospira 974 929 713 35 33 7 18 9 10 7 4
genus Lachnotalea 3 3
genus Lacibacter 2 3
genus Lacibacterium 123
genus Lacihabitans 7
genus Lacimicrobium 1
genus Lacinutrix 1 4
genus Lacrimispora 299 1 32 18 2 1 4
genus Lacticaseibacillus 56 184 141 3 8 2 3 1 3 4
genus Lactiplantibacillus 8 115 65 13 1 3 1 4 2
genus Lactivibrio 2
genus Lactobacillus 980 873 813 36 27 12 18 11 10 7 4
genus Lactococcus 623 562 260 9 10 3 7 1 7 3 4
genus Lactonifactor 649 477 27 3 9 7
genus Lactovum 222
genus Lacunisphaera 3
genus Lagierella 1
genus Lamprocystis 2
genus Lancefieldella 72 58 4 2 1 2 1 1
genus Lapidilactobacillus 4
genus Laribacter 3 3
genus Larkinella 1
genus Larsenimonas 1
genus Lascolabacillus 1
genus Latilactobacillus 2 33 4 1 1 3
genus Lautropia 43 52 8 1 1
genus Lawsonella 1
genus Lawsonia 534 5 1 1 3
genus Lawsonibacter 9
genus Leadbetterella 14 3
genus Lebetimonas 20
genus Leclercia 1 1
genus Legionella 66 591 1 1 4 3 4
genus Leifsonia 1 1 1 1
genus Leisingera 1
genus Lelliottia 1 279 2 4
genus Leminorella 4 1
genus Lentibacillus 46 137 1
genus Lentilactobacillus 3 56 14 2 1 1 2
genus Lentisphaera 4
genus Lentzea 1 2 1
genus Leptofauchea 10
genus Leptolinea 93 2
genus Leptolyngbya 1 214 1 1 2 4
genus Leptonema 14 2
genus Leptospira 26 260 2 4
genus Leptospirillum 17 1
genus Leptothrix 7 136 2 1
genus Leptotrichia 61 39 29 2 4
genus Leucobacter 38 16 1 1
genus Leuconostoc 687 422 79 3 7 2 2 9 6 4
genus Leucothrix 5 11 1
genus Levilactobacillus 37 53 5 1 1 1
genus Levilinea 1
genus Levyella 346 2
genus Lewinella 8 45
genus Libanicoccus 1
genus Liberibacter 2 52 6 7 1
genus Lichenihabitans 1
genus Ligilactobacillus 126 112 65 6 1 2 1 4
genus Limibacillus 15
genus Limibacter 1
genus Limimaricola 2
genus Limimonas 3
genus Limisphaera 9 2
genus Limnobacter 32 668 1 1 2 1
genus Limnobaculum 1
genus Limnochorda 1 1
genus Limnohabitans 3 11 2
genus Limnoraphis 3
genus Limnospira 1
genus Limosa 1
genus Limosilactobacillus 281 122 75 2 6 2 2 1 4
genus Liquorilactobacillus 151 1
genus Lishizhenia 2
genus Listeria 216 192 1 1 1 4 1 4
genus Litoribacillus 56
genus Litoribacter 18
genus Litoribrevibacter 11
genus Litoricola 29 49 3
genus Litorilinea 8 2 2
genus Litorilituus 80 4
genus Loigolactobacillus 10 1 1
genus Loktanella 6 2
genus Longibaculum 3 1 3
genus Longicatena 4 3
genus Longilinea 3 4
genus Longimonas 51
genus Lonsdalea 5
genus Luminiphilus 48
genus Lunatimonas 2
genus Luteibacter 40 519 3 1
genus Luteibaculum 1
genus Luteimonas 18 16 1 1
genus Luteipulveratus 1
genus Luteitalea 1
genus Luteivirga 5
genus Luteococcus 9 1
genus Luteolibacter 25 394 2
genus Lutibacter 38 4
genus Lutibacterium 5
genus Lutibaculum 1
genus Lutispora 241 1 3 5
genus Lysinibacillus 17 123 5 1 5 2 1 4
genus Lysinimonas 1
genus Lysobacter 58 180 1 1 2 2 4
genus Macellibacteroides