Bacteria reported by various 16s providers

Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

class

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Acidimicrobiia 5 125 33
Acidithiobacillia 19 1
Acidobacteriia 853 221 5 49
Alphaproteobacteria 484 365 14 216
Anaerolineae 12 68 106
Aquificae 4
Archaeoglobea 1
Ardenticatenia 9 1
Armatimonadia 1
Babeliae 2
Bacilli 854 401 39 226
Bacteroidia 856 381 19 225
Balneolia 214 7
Betaproteobacteria 811 383 19 227
Blastocatellia 2 65 2
Brocadiae 4
Caldilineae 1 107 3
Caldisericia 1 2
candidate division Termite Group 3 2
Chitinispirillia 7
Chitinophagia 7 315 5
Chlamydiia 50 27
Chlorobia 1 31 188
Chloroflexia 3 34 14
Chthonomonadetes 29 3
Clostridia 857 401 39 227
Coriobacteriia 843 401 34 8
Cytophagia 10 340 13 4
Deferribacteres 1 1 1
Dehalococcoidia 1 86 41
Deinococci 11 88 12 152
Deltaproteobacteria 689 388 31 221
Dictyoglomia 30
Elusimicrobia 7 48 20 2
Endomicrobia 1
Epsilonproteobacteria 299 211 10 120
Erysipelotrichia 837 401 39 224
Fibrobacteria 206 82 20
Fimbriimonadia 15 1
Flavobacteriia 506 252 13 197
Fusobacteria 170 236 7 124
Gammaproteobacteria 786 381 19 231
Gemmatimonadetes 2 30 16 1
Gloeobacteria 6 1
Halobacteria 1
Holophagae 190 105
Ignavibacteria 2 268 16 22
Ktedonobacteria 6 16
Lentisphaeria 303 143 8 2
Limnochordia 2 1
Malasseziomycetes 2
Methanobacteria 231 113 17 74
Methanomicrobia 20 2 1
Methylacidiphilae 4
Mollicutes 182 348 26 215
Negativicutes 858 401 37 11
Nitriliruptoria 19 111
Nitrososphaeria 1
Nitrospinia 2
Nitrospira 2 22 36
Oligoflexia 1 4
Oligosphaeria 1 15
Opitutae 108 168 1 145
Pedosphaerae 1
Pentapetalae 21
Phycisphaerae 2 4
Planctomycetia 3 42 7
Rhodothermia 4
Rubrobacteria 2 36 5
Saprospiria 74 4
Solibacteres 1 6
Spartobacteria 24 8
Sphingobacteriia 22 268 28 219
Spirochaetia 28 64 5
Synergistia 251 159 1 161
Thermodesulfobacteria 32
Thermoleophilia 2 40 5
Thermolithobacteria 18
Thermomicrobia 1 2 1
Thermoplasmata 21 17
Thermoprotei 5
Thermotogae 4
Tissierellia 327 382 17 222
unclassified alpha proteobacteria 2
unclassified epsilon proteobacteria 2
Verrucomicrobiae 523 359 28 195

family

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zetaproteobacteria 1 12 1
Acanthopleuribacteraceae 22
Acaryochloridaceae 2
Acetobacteraceae 7 125 1 83
Acholeplasmataceae 18 264 11 206
Acidaminococcaceae 600 369 23 9
Acidiferrobacteraceae 7 4
Acidimicrobiaceae 127 34
Acidithiobacillaceae 19 1
Acidobacteriaceae 99 77 40
Acidothermaceae 27 1
Actinomycetaceae 693 355 26 181
Actinopolysporaceae 58 64
Aerococcaceae 94 316 101
Aeromonadaceae 11 110 2 66
Akkermansiaceae 282 349 28 8
Alcaligenaceae 12 86 10 219
Alcanivoracaceae 13 35
Algiphilaceae 16
Alicyclobacillaceae 147 8 5
Alteromonadaceae 199 57
Amoebophilaceae 193
Anaerolineaceae 10 67 33
Anaeromyxobacteraceae 248 2
Anaeroplasmataceae 129 159 3 21
anamorphic Mycosphaerellaceae 1
Anaplasmataceae 18 74
Aphanizomenonaceae 1 4
Aphanothecaceae 2 1
Apiaceae 1
Aquificaceae 4 6
Archaeoglobaceae 1
Archangiaceae 37 5
Ardenticatenaceae 9 1
Armatimonadaceae 1
Atopobiaceae 120 259 12 5
Aurantimonadaceae 1 1 3
Babeliaceae 3
Bacillaceae 256 311 34 211
Bacillales Family X. Incertae Sedis 1 205 214
Bacteriovoracaceae 2 14 1
Bacteroidaceae 838 399 38 226
Balneolaceae 217 1 17
bandicoots 1
Barnesiellaceae 305 21
Bartonellaceae 2 14
Bdellovibrionaceae 1 4
Beijerinckiaceae 1 6 10
Bernardetiaceae 46 1
Beutenbergiaceae 1 1
Bifidobacteriaceae 672 395 28 222
Blastocatellaceae 2
Blattabacteriaceae 4
Bogoriellaceae 14 3
Borreliaceae 2 9
Brachyspiraceae 14 19
Bradymonadaceae 1
Bradyrhizobiaceae 17 27 16
Brevibacteriaceae 70 44 22
Brevinemataceae 2
Brocadiaceae 5
Brucellaceae 29 19 4 22
Budviciaceae 126 4
Burkholderiaceae 42 122 15 134
Caedimonadaceae 1
Calanidae 1
Caldicoprobacteraceae 253 7
Caldilineaceae 1 110 91
Caldisericaceae 1 1
Calditrichaceae 57
Campylobacteraceae 298 176 4 86
Candidatus Homeothermaceae 4
Cardiobacteriaceae 10 71 5
Carnobacteriaceae 369 209 5 106
Catabacteriaceae 107 71 1
Catalimonadaceae 27
Catenulisporaceae 1 4
Caulobacteraceae 17 56 102
Celerinatantimonadaceae 4
Cellulomonadaceae 26 16
Cellvibrionaceae 30 4
Centrarchidae 1
Chamaesiphonaceae 4 3
Chelatococcaceae 1 1
Chelidae 1
Chitinispirillaceae 7
Chitinivibrionaceae 2
Chitinophagaceae 9 314 128
Chlamydiaceae 1 2
Chlorobiaceae 32 189
Chloroflexaceae 2 1
Chlorogloeopsidaceae 6
Chordaceae 1
Christensenellaceae 138 67 25 23
Chromatiaceae 5 226 1 196
Chromobacteriaceae 48 4
Chroococcaceae 86
Chroococcidiopsidaceae 2 1
Chrysiogenaceae 15 61
Chthoniobacteraceae 4 8
Chthonomonadaceae 30 3
Cichlidae 1
Clostridiaceae 842 399 39 241
Clostridiales Family XI. Incertae Sedis 232
Clostridiales Family XII. Incertae Sedis 18 233
Clostridiales Family XIII. Incertae Sedis 708 367 33 7
Clostridiales Family XVI. Incertae Sedis 11 133
Clostridiales Family XVII. Incertae Sedis 34 17
Clostridiales incertae sedis 747 3
Cochlospermaceae 1
Cohaesibacteraceae 1 1
Coleofasciculaceae 4
Colwelliaceae 88 4
Comamonadaceae 130 74 2 196
Competibacteraceae 70
Conexibacteraceae 1 6 1
Corbulidae 1
Coriobacteriaceae 829 354 36 238
Corynebacteriaceae 498 236 7 133
Coxiellaceae 2 24 8
Criblamydiaceae 20
Crocinitomicaceae 20 3 1
crown conchs 1
Cryomorphaceae 1 44 1
Cyanobacteriaceae 21 34
Cyanothecaceae 1
Cyclobacteriaceae 115 4
Cytophagaceae 6 286 4 202
Dacrymycetaceae 1
Deferribacteraceae 1 44 76
Defluviitaleaceae 20 97 3
Dehalococcoidaceae 19 38
Deinococcaceae 10 49 107
Demequinaceae 21
Dermabacteraceae 70 35 39
Dermacoccaceae 7 11 3
Dermatophilaceae 1 2 1
Dermocarpellaceae 1
Desulfarculaceae 115 1
Desulfobacteraceae 2 254 2 54
Desulfobulbaceae 53 1 2
Desulfofervidaceae 1
Desulfohalobiaceae 20 62
Desulfomicrobiaceae 103 18
Desulfonatronaceae 22 65
Desulfovibrionaceae 687 367 34 213
Desulfurellaceae 4 2
Desulfurobacteriaceae 5 1
Desulfuromonadaceae 47 119
Dictyoglomaceae 30 1
Dientamoebidae Grasse, 1953 1
Dietziaceae 4 55 16
Dunaliellaceae 1
Dysgonamonadaceae 24 4
Ectothiorhodospiraceae 1 95 163
Eggerthellaceae 461 389 38 11
Egibacteraceae 1
Egicoccaceae 1
Elusimicrobiaceae 7 28 5
Emplectonematidae 1
Endomicrobiaceae 1
Endozoicomonadaceae 1
Enterobacteriaceae 641 249 18 231
Enterococcaceae 158 111 30 217
Entomoplasmataceae 31 113
Eremolepidaceae 1
Erwiniaceae 126 113 4 4
Erysipelotrichaceae 837 389 24 241
Erythrobacteraceae 3 13 32
Eubacteriaceae 324 399 39 222
Euzebyaceae 14 111
Ferrimonadaceae 25 2
Ferrovaceae Johnson et al. 2014 1
Fervidobacteriaceae 4
Fibrobacteraceae 155 81 21
Fimbriimonadaceae 15 2
Flammeovirgaceae 1 169 63
Flavobacteriaceae 502 225 3 198
Fortieaceae 4
Francisellaceae 28 15
Frankiaceae 3 4
Fusobacteriaceae 141 202 8 107
Gaiellaceae 2 20
Gallionellaceae 15 27
Geminicoccaceae 2
Gemmataceae 1 6 5
Gemmatimonadaceae 1 13 3
Geobacteraceae 21 16
Geodermatophilaceae 3 58 5
Glareolidae 1
Gloeobacteraceae 6 1
Glycomycetaceae 60 18
Gnetaceae 1
Gomontiellaceae 43 1
Gomphosphaeriaceae 6
Gordoniaceae 4 35 6
Gottschalkiaceae 4
Gracilibacteraceae 8 194 4
Granulosicoccaceae 35 1
Haematopodidae 1
Hafniaceae 6 25 1
Hahellaceae 78 23
Halanaerobiaceae 1 88 45
Halieaceae 1 37 1
Haliscomenobacteraceae 43 3
Haloarchaeaceae 1
Halobacteriovoraceae 19 4
Halobacteroidaceae 136 17
Halomonadaceae 1 198 2 98
Haloplasmataceae 1 9
Halothiobacillaceae 35 3
Hapalosiphonaceae 1
Helicobacteraceae 4 15 75
Heliobacteriaceae 78 4 100
Herpetosiphonaceae 3
Heteroleibleiniaceae 6
Holophagaceae 180 105
Holosporaceae 3
Hungateiclostridiaceae 4
Hydrogenophilaceae 5 86 36
Hydrogenothermaceae 8 1
Hyellaceae 1
Hymenobacteraceae 2 73 4
Hyphomicrobiaceae 4 49 109
Hyphomonadaceae 1 221 23
Iamiaceae 3 10
Ichthyobacteriaceae 1
Idiomarinaceae 15 15
Ignavibacteriaceae 1 23 19
Immundisolibacteraceae 3
Intrasporangiaceae 3 24 11
Isosphaeraceae 2 5 6
Jiangellaceae 2 4
Jonesiaceae 34 2
Kallotenuaceae 8
Kangiellaceae 19 1
Kiloniellaceae 23 3 57
Kineosporiaceae 1 15 6
Kofleriaceae 1 15 17
Kordiimonadaceae 63
Kosmotogaceae 1 1
Labilitrichaceae 27
Lachnospiraceae 853 399 39 245
Lactobacillaceae 827 392 26 214
Lanariaceae 1
Legionellaceae 1 22 145
Lentisphaeraceae 3
Leptolyngbyaceae 1 2 4
Leptospiraceae 14 84
Leptotrichiaceae 53 77 37
Leuconostocaceae 114 369 10 181
Lewinellaceae 7
Limnochordaceae 2 1
Listeriaceae 1 126 161
Litoricolaceae 21 6
Magnetococcaceae 6 1
Malasseziaceae 2
Marinifilaceae 100 3
Marinilabiliaceae 1 237 8 1
Mariprofundaceae 1 12 1
Melioribacteraceae 266 16 4
Merismopediaceae 3
Mesoaciditogaceae 1
Methanobacteriaceae 231 111 5 74
Methanocorpusculaceae 1 1 1
Methanomassiliicoccaceae 21 17
Methanoregulaceae 1
Methylacidiphilaceae 5
Methylobacteriaceae 9 31 23
Methylococcaceae 1 79 6
Methylocystaceae 1 8 7
Methylophilaceae 106 100
Methylothermaceae 18
Microbacteriaceae 67 219 90
Microbulbiferaceae 4
Micrococcaceae 179 198 10 92
Microcoleaceae 120 11
Microcystaceae 4
Micromonosporaceae 2 87 66
Micropepsaceae 8
Microscillaceae 48 1
Microthrixaceae 1
Midichloriaceae 1 1
mitosporic Venturiaceae 1
moles, shrew-moles, and desmans 1
Mooreiaceae 2
Moraxellaceae 40 192 2 118
Morganellaceae 11 200 4
Moritellaceae 1 1
Mycobacteriaceae 75 39 56
Mycoplasmataceae 17 263 6 187
Myxococcaceae 2 4
Mzabimycetaceae 61
Nakamurellaceae 2 4
Nannocystaceae 11 11
Nanopelagicaceae 3
Natranaerobiaceae 14 1
Nautiliaceae 12 1
Neisseriaceae 89 78 63
nightshade family 13
Nitriliruptoraceae 5
Nitrosomonadaceae 8 141 5 5
Nitrosopumilaceae 1
Nitrososphaeraceae 1 1
Nitrospinaceae 2
Nitrospiraceae 2 23 36
Nocardiaceae 24 5 30
Nocardioidaceae 4 149 43
Nocardiopsaceae 119 4
Nostocaceae 1 2 190
Oceanospirillaceae 116 58
Odoribacteraceae 360 378 35 203
Oleiphilaceae 3
Oligosphaeraceae 15
Opitutaceae 1 26 5
Orbaceae 3 4
Oscillatoriaceae 46 116
Oscillospiraceae 794 398 38 11
Oxalobacteraceae 281 205 26 143
Paenibacillaceae 3 343 32 178
Paludibacteraceae 1 4
Paracaedibacteraceae 1
Parachlamydiaceae 2 2
Paridae 1
Parvularculaceae 5 1
Pasteurellaceae 595 336 20 184
Pasteuriaceae 9
Patulibacteraceae 2 1
Pectobacteriaceae 1 187 1 4
Pelagibacteraceae 4 1
Peptococcaceae 559 368 26 223
Peptoniphilaceae 322 372 9 7
Peptostreptococcaceae 849 398 33 224
Persicobacteraceae 40 4
Petrotogaceae 4
Phycisphaeraceae 2 1
Phyllobacteriaceae 40 15 8
Piscirickettsiaceae 2 128 39
Planctomycetaceae 2 37 3
Planoceridae 1
Planococcaceae 42 341 18 105
Pleuronectidae 1
Porphyromonadaceae 573 399 38 225
Porticoccaceae 1
Prevotellaceae 627 398 24 220
Prochloraceae 2 4
Prochlorococcaceae 1
Prochlorotrichaceae 3
Prolixibacteraceae 55 1
Promicromonosporaceae 15 8
Propionibacteriaceae 143 156 15 20
Prorhynchidae 1
Proteinivoraceae 190
Pseudanabaenaceae 1 75
Pseudoalteromonadaceae 24 13
Pseudomonadaceae 71 175 4 56
Pseudonocardiaceae 1 109 87
Psychromonadaceae 17 7
Puniceicoccaceae 7 163 142
Rarobacteraceae 31
Rhabdochlamydiaceae 26
Rhizobiaceae 18 37 11 67
Rhodanobacteraceae 1 82 4
Rhodobacteraceae 11 117 4 64
Rhodobiaceae 3 4 4
Rhodocyclaceae 76 164 149
Rhodospirillaceae 404 319 26 178
Rhodothalassiaceae 18
Rhodothermaceae 64 6 201
Rickettsiaceae 112 134
Rikenellaceae 779 397 38 36
Rivulariaceae 39 116
Roseiarcaceae 3
Roseiflexaceae 1 8 1
Rubricoccaceae 3
Rubritaleaceae 70
Rubrobacteraceae 1 20 5
Ruminococcaceae 842 399 39 244
Saccharospirillaceae 151 5
Salinibacteraceae 1
Salinisphaeraceae 11 1
Salinivirgaceae 1
Sandaracinaceae 4 1
Sanguibacteraceae 1 1
Saprospiraceae 26 20
Schleiferiaceae 8
Scytonemataceae 1 4
Sedimentisphaeraceae 3
Segniliparaceae 15 1
Selenomonadaceae 64 232 14 5
Shewanellaceae 63 147
Simkaniaceae 6 1
Simmondsiaceae 1
Sinobacteraceae 3 56 167
Sneathiellaceae 3
Solibacteraceae 1 1
Solirubrobacteraceae 1 10 4
Sorangiaceae 1 1 17
Sphaerobacteraceae 6
Sphingobacteriaceae 8 268 26 221
Sphingomonadaceae 29 227 57
Spirillaceae 14
Spirochaetaceae 1 40 57
Spiroplasmataceae 166 4
Spirulinaceae 4
Spongiibacteraceae 86 1
Sporichthyaceae 6 1
Sporolactobacillaceae 66 51
Sporomusaceae 23 259 4
Staphylococcaceae 234 127 3 183
Sterolibacteriaceae 12 4
Streptococcaceae 842 397 39 224
Streptomycetaceae 82 2 59
Streptosporangiaceae 69 90
Succinivibrionaceae 16 117 58
Sulfolobaceae 5
Sutterellaceae 758 395 39 8
Symbiobacteriaceae 109 147
Synechococcaceae 6 75
Synergistaceae 251 160 1 163
Syntrophaceae 37 44
Syntrophobacteraceae 156 94
Syntrophomonadaceae 12 187 184
Syntrophorhabdaceae 1 16
Tannerellaceae Ormerod et al. 2016 431 9
Taphrinaceae 1
Temperatibacteraceae 1
Thermaceae 1 26 117
Thermoactinomycetaceae 1 186 129
Thermoanaerobacteraceae 229 126 194
Thermoanaerobacterales Family III. Incertae Sedis 73 1 212
Thermoanaerobacterales Family IV. Incertae Sedis 16
Thermodesulfobacteriaceae 13 32
Thermodesulfobiaceae 15 25 6 4
Thermogemmatisporaceae 5 16
Thermoleophilaceae 18
Thermolithobacteraceae 18
Thermomicrobiaceae 1
Thermomonosporaceae 34 70
Thermonemataceae 19
Thermosporotrichaceae 2
Thermotogaceae 1 19
Thioalkalispiraceae 1 32 3
Thiobacillaceae 5 1
Thiotrichaceae 1 43 144
Thorselliaceae 34
Tissierellaceae 1 46 1
Trueperaceae 1 9
Tsukamurellaceae 1 2 26
unclassified Enterobacterales 3
Veillonellaceae 810 393 32 228
Verrucomicrobia subdivision 3 4 1
Verrucomicrobiaceae 241 72 188
Vesicomyidae 1
Vibrionaceae 1 55 18
Vicinamibacteraceae 1
Victivallaceae 303 143 8 4
Waddliaceae 1
Wenzhouxiangellaceae 18 1
Woeseiaceae 1
Xanthobacteraceae 2 6 7
Xanthomonadaceae 35 123 183
Yersiniaceae 22 67 5 4

genus

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zoogloeaceae 2 4
16SrXII (Stolbur group) 3
Abiotrophia 19 40 11
Absiella 2
Acanthopleuribacter 22
Acaryochloris 2
Acetanaerobacterium 131 208 1
Acetatifactor 2 365 1
Acetitomaculum 148 272 1
Acetivibrio 34 318 27
Acetoanaerobium 217 1
Acetobacter 11 3
Acetobacterium 171 217
Acetobacteroides 130
Acetohalobium 1 13
Acetomicrobium 16 1
Acetonema 97
Acholeplasma 7 263 1 166
Achromatium 2
Achromobacter Yabuuchi and Yano 1981 emend. Yabuuchi et al. 1998 1 9 22
Acidaminobacter 116 70
Acidaminococcus 109 205 4 168
Acidibacter 21
Acidicaldus 1
Acidicapsa 40
Acidiferrobacter 4 3
Acidihalobacter 1
Acidimicrobium 31
Acidiphilium 1 10
Acidipropionibacterium 1 4
Acidisphaera 1
Aciditerrimonas 45
Acidithiobacillus 19 1
Acidobacterium 3
Acidocella 1
Acidothermus 27
Acidovorax 8 15 16
Acinetobacter 33 107 1 44
Acinothrix 1 1
Acizzia 1
Acrocarpospora 2
Actimicrobium 2
Actinaurispora 1
Actinoallomurus 1
Actinoalloteichus 4
Actinobacillus 105 90 3 128
Actinobaculum 20 5 20
Actinocatenispora 38 55
Actinocorallia 4 1
Actinokineospora 1
Actinomadura 18 17
Actinomyces 638 312 10 168
Actinomycetospora 2
Actinoplanes 48 9
Actinopolymorpha 16
Actinopolyspora 55 65
Actinosynnema 1
Actinotignum 20 39
Adhaeribacter 11
Adlercreutzia 568 3 172
Advenella 6 3
Aequorivita 7 2 2
Aeribacillus 24 1
Aeriscardovia 63
Aerococcus 19 89 9
Aeromicrobium 2 3 3
Aeromonas 11 71 2 4
Aerosphaera 52
Aestuariispira 176 2
Afipia 1 3
Agaribacter 141
Agarilytica 1
Agarivorans 3 1
Agathiphaga 1
Agathobacter 1
Agathobaculum 3
Aggregatibacter 191 64 74
Agmenellum 1
Agreia 1
Agrococcus 3 1 6
Agromyces 27 45
Ahniella 1
Akkermansia 518 351 28 204
Albidovulum 4
Albimonas 2
Alcaligenes 2 5 3
Alcalilimnicola 1
Alcanivorax 5 35
Algibacter 3 1
Algicola 22
Algimonas 5
Algiphilus 16
Algivirga 1
Algorimarina 1
Algoriphagus 49 3
Alicycliphilus 1 1 4
Alicyclobacillus 41 4 4
Aliiarcobacter 1
Aliidiomarina 9
Aliifodinibius 88
Aliihoeflea 1
Aliivibrio 1
Alishewanella 28 32
Alistipes 779 390 23 21
Alkalibacillus 2 19
Alkalibacter 41
Alkalibacterium 5 1 85
Alkalibaculum 81
Alkaliflexus 17 1
Alkalimarinus 5
Alkaliphilus 133 4 217
Alkalispirillum 1
Alkalitalea 1
Alkanibacter 1
Alkanindiges 1 3
Allisonella 77 68 3
Alloactinosynnema 4
Allobaculum 9 59 25
Allocatelliglobosispora 1
Allochromatium 15
Allofrancisella 3 1
Allofustis 2 3
Alloiococcus 3 33 2
Allokutzneria 1 1
Alloprevotella 96 183 2
Alloscardovia 27 48 29
Alocasia 1
Alsobacter 1
Altererythrobacter 3 5 4
Alteribacillus 1
Alterococcus 14
Alteromonas 11 4
Altibacter 1
Alysiella 2 2
Amaricoccus 1 1 13
Ameyamaea 3
Aminicella 200
Aminiphilus 1 28
Aminipila 4
Aminivibrio 15
Aminobacter 1 4
Aminobacterium 8 9
Aminomonas 25 4
Ammonifex 4 70
Ammoniphilus 10 11
Amnibacterium 1
Amoebophilus 192
Amorphonostoc 1 80
Amphibacillus 11 4
Amphritea 2 7
Amycolatopsis 2 9
Amylibacter 3
Anabaenopsis 1
Anaerobacillus 25 1 56
Anaerobacter 65
Anaerobacterium 49 16 4
Anaerobiospirillum 12
Anaerobium 118 20
Anaerobranca 188 171
Anaerobutyricum 4
Anaerocella 65
Anaerococcus 409 243 6 108
Anaerocolumna 323 8
Anaerofilum 261 209 8 213
Anaerofustis 213 238 48
Anaeroglobus 22 232
Anaerolinea 4 12 12
Anaeromassilibacillus 10
Anaeromusa 5 39
Anaeromyxobacter 248 2
Anaerophaga 3
Anaeroplasma 49 83 1 19
Anaerorhabdus 6
Anaerosalibacter 86
Anaerosinus 37 6
Anaerosphaera 37
Anaerospora 61
Anaerosporobacter 589 238 6
Anaerostipes 827 415 39 219
Anaerotaenia 3
Anaerotignum 5
Anaerotruncus 774 345 31 219
Anaerovibrio 9 2 1 192
Anaerovorax 286 20 14
Anaplasma 7 1
Anderseniella 4
Andreprevotia 1
Aneurinibacillus 1 19 3
Angelakisella 23
Annandia 2
Anoxybacillus 4 16 25
Anoxybacter 4
Anoxynatronum 260
Antarctobacter 1
aphid P-endosymbionts 1 3
Apibacter 1
Aquabacterium 5 11 1
Aquamicrobium 4
Aquaspirillum 9
Aquibacter 1 6
Aquicella 5
Aquiflexum 4 1
Aquihabitans 8
Aquimarina 7 7
Aquimonas 9 1
Aquincola 1
Aquipuribacter 1 3
Aquisalimonas 21
Aquisphaera 2
Aquitalea 3 6
Arabia 1 1
Arachidicoccus 3
Arcanobacterium 34 12 1 7
Archaeoglobus 1
Archangium 9 1
Arcicella 43
Arcobacter 2 4 8
Arcticibacterium 1
Ardenticatena 9
Arenibacter 1 4
Arenimonas 15
Argyropelecus 1
Arhodomonas 7
Aridibacter 13
Armatimonas 1
Aromatoleum 1
Arsenicicoccus 1 1
Arsenophonus 20 4
Arthothelium 1
Arthrobacter 15 3 1 52
Arthromitus 3
Arthronema 1
Arthrospira 1 1 5
Arum 1
Asaccharobacter 11
Asaccharospora 104
Asaia 4 1
Asinibacterium 3
Asteroleplasma 74 104 1
Asticcacaulis 1 30 83
Atlantibacter 1
Atopobium 118 156 3 71
Atopococcus 9
Atopostipes 24
Aurantimicrobium 1
Aurantimonas 1
Auraticoccus 1 3
Aureibacter 3
Aureicoccus 1
Aureimonas 1 1
Aureispira 1
Aureitalea 3
Auricoccus 1
Auritidibacter 1
Austwickia 1
Avibacterium 28 22
Azoarcus 3 1 19
Azohydromonas 4
Azonexus 7
Azorhizobium 1 1
Azospira 12 2 1
Azospirillum 2 152 2 42
Babela 2
Bacillus 81 181 1 166
Bacillus altitudinis complex 3
Bacteria 2
Bacterioplanes 1 1
Bacteriovorax 1 10
Bacteroides 838 390 18 244
Baia 31
Balneatrix 5
Balneola 77 17
Barnesiella 444 339 5 7
Barrientosiimonas 10
Bartonella 2 13
Basfia 3 1
Basilea 1
Bdellovibrio 1 4
Beggiatoa 1
Beijerinckia 2
Belliella 13 3
Bellilinea 1
Belnapia 1 1
Bergeyella 15 4
Bernardetia 32 1
Beutenbergia 1
Bibersteinia 1 2
Bifidobacterium 658 380 16 237
Bilophila 647 33 211
Biostraticola 14
Bisgaardia 34
Bittarella 8
Bizionia 2
Blastocatella 3
Blastochloris 3
Blastococcus 1 2
Blastocystis 2
Blastomonas 1
Blastopirellula 7
Blattabacterium 4
Blautia 841 401 39 245
Blochmannia 60
Bogoriella 6
Bombiscardovia 1 2
Bordetella 33 4
Borrelia 2 9
Bosea 3 5 6
Bowmanella 27
Brachiaria 1
Brachybacterium 15 7 32
Brachymonas 1
Bradymonas 1
Bradyrhizobium 12 1 10
Branchiibius 4
Brassicibacter 282 5
Brenneria 181 5
Breoghania 1
Brevefilum 1
Brevibacillus 41 1 24
Brevibacterium 70 44 23
Brevifollis 7
Brevinema 2
Brevirhabdus 1
Brevundimonas 14 14 16
Brochothrix 5 147
Brockia 12
Brucella 1 1
Bryobacter 3
Bulleidia 5 36 1 34
Burkholderia 2 26 10 59
Burkholderia cepacia complex 4
Bursatella 1
Buttiauxella 49 1 1
Butyricicoccus 79 246 37 5
Butyricimonas 482 352 31 185
Butyrivibrio 432 394 30 170
Bythopirellula 4
Caballeronia 18
Caedibacter 2
Caenispirillum 9
Caldalkalibacillus 54
Caldanaerobacter 1 38 12
Caldanaerobius 17
Caldanaerovirga 2
Caldicellulosiruptor 27 1 202
Caldicoprobacter 125 7
Caldilinea 4 91
Caldimicrobium 1 1
Caldimonas 9
Caldinitratiruptor 111
Caldisalinibacter 184
Caldisericum 1 1
Calditerrivibrio 3 1
Caldithrix 1 57
Calochaete 4
Calolisianthus 1
Caloramator 1 272 10 209
Caloribacterium 5
Calothrix 39 107
Camarhynchus 1
Camelimonas 2
Camellia 1
Caminicella 259 4
Campylobacter 296 181 4 86
Campylotropis 1
Candidatus Aquiluna Hahn 2009 1
Candidatus Azobacteroides 30
Candidatus Contubernalis 23
Candidatus Endobugula 12
Candidatus Glomeribacter Bianciotto et al. 2003 104
Candidatus Ishikawaella 1
Candidatus Nitrosoglobus 1
Candidatus Pelagibacter 4
Candidatus Phlomobacter 4
Candidatus Phytoplasma 8 190
Candidatus Regiella 13
Candidatus Rhabdochlamydia 26
Candidatus Scalindua 4
Candidatus Soleaferrea 541 4
Candidatus Stoquefichus 127 1
Candidatus Tammella 99
Candidatus Vidania 1
Candidatus Walczuchella 1
Capnocytophaga 13 12 7
Caproiciproducens 1 31 4
Carboxydocella 12 133
Carboxydothermus 5 4
Carboxylicivirga 125 1
Cardiobacterium 10 59 4
Carnimonas 13
Carnobacterium 10 2 16
Casaltella 274 4
Castellaniella 1
Catabacter 106 71
Catellibacterium 3
Catellicoccus 1 2
Catenibacterium 308 130 1 68
Catenisphaera 40 2
Catenovulum 1
Catenulispora 1 4
Catonella 11 385 17 184
Caulobacter 4 7 5
Cecembia 9
Cedecea 41
Celeribacter 3
Celerinatantimonas 4
Cellulomonas 26 10
Cellulophaga 4 4
Cellulosibacter 20
Cellulosilyticum 15 382 2 4
Cellulosimicrobium 3
Cellvibrio 10 3
Centipeda 19
Cerasicoccus 99 72
Cereibacter 1
Cesiribacter 18
Cetobacterium 4 16 15
Chamaesiphon 4 3
Chania 9 3
Chelativorans 4 1
Chelatococcus 2 1
Chelonobacter 1 3
Chiayiivirga 2
Chiropotes 1
Chishuiella 5
Chitinilyticum 2
Chitinimonas 12
Chitinispirillum 7
Chitinivibrio 2
Chitinolyticbacter 1
Chitinophaga 18 8
Chlamydia 1 1
Chloracidobacterium 9 3
Chlorobaculum 190
Chlorobium 1 1
Chloroflexus 1
Chlorogloeopsis 7
Chloroherpeton 10 3
Chondrocystis 1
Chordaria 1
Christensenella 137 61 17 11
Chromatium 3 72
Chromobacterium 7 17
Chromohalobacter 3
Chroococcidiopsis 2 1
Chroococcus 85
Chryseobacterium 11 32 26
Chryseolinea 7 4
Chryseomicrobium 10
Chrysopa 1
Chthoniobacter 4 8
Chthonomonas 30 3
Cichlasoma 1
Citreitalea 1
Citricoccus 1
Citromicrobium 3
Cladothrix Cohn 1875 1
Clavibacter 2 4
Cloacibacillus 115 60 14
Cloacibacterium 6 7 4
Clostridiisalibacter 5
Clostridioides 335 41 3 9
Clostridium 823 390 19 242
Cnuella 3
Cobetia 1
Cocleimonas 2
Coenonia 2
Cohaesibacter 1 1
Cohnella 23 96
Coleofasciculus 1
Colidextribacter 1 25
Collimonas 14 5
Collinsella 814 341 34 189
Colwellia 17 4
Comamonas 31 22 18
Commensalibacter Roh et al. 2008 1
Conchiformibius 1
Conexibacter 6 1
Confluentimicrobium 1
Congregibacter 3
coot 1
Coprobacillus 171 190 5 218
Coprobacter 314 267 11 1
Coprococcus 2 401 33 239
Coprothermobacter 6 20 3
Coptothyris 1
Coraliomargarita 25 72
Corallibacter 1
Coriobacterium 8 2 27
Corticibacter 2
Corynebacterium 497 226 6 140
Couchioplanes 3 1
Couratari 1
Coxiella 11 1
Craurococcus 2
Criblamydia 20
Crinalium 1 1
Croceibacter 6 1
Croceicoccus 1
Cronobacter 88 28 4
Crossiella 1
Cruoricaptor 1 30
Cryobacterium 11 3 1
Cryomorpha 39
Cryptanaerobacter 1
Cryptobacterium 3 135 1
Cucumibacter 2
Cupriavidus 2 19 5
Curculigo 1
Curtibacterium 1 3
Curvibacter 10 3 2
Cutibacterium 36 6 1
Cyanobacterium 21 34
Cyanobium 1 3 1
Cyanothece 1
Cyclobacterium 20 4
Cycloclasticus 13 4
Cyclonatronum 3
Cylindrospermum 1
Cyphomandra 5 1
Cystobacter 14 5
Cytophaga 1 30 1
Dactylosporangium 1
Dasania 11
Dechloromonas 31
Deefgea 3
Deferribacter 13 50
Deferrisoma 12
Defluviicoccus 5
Defluviimonas 3
Defluviitalea 2 81
Defluviitoga 1 1
Dehalobacter 81 5 4
Dehalobacterium 9 103
Dehalococcoides 19 3
Dehalogenimonas 71 40
Deinococcus 10 48 1 107
Delftia 81 5 5
Deltavirus 1
Demequina 20 1
Dendrosporobacter 26
Denitratisoma 1 5 26
Denitrobacter 1
Denitrobacterium 1 7 1
Denitrovibrio 3
Dermabacter 57 28 8
Dermacoccus 1 1 4
Dermatosorus 1
Derxia 14
Desemzia 89 1
Desertibacter 3
Desmospora 5
Desulfacinum 14
Desulfallas 1
Desulfarculus 70 1
Desulfatibacillum 1 1
Desulfatiferula 12
Desulfatiglans 4
Desulfatirhabdium 1
Desulfatitalea 5
Desulfitibacter 1 30 2
Desulfitispora 19
Desulfitobacterium 1 43 57
Desulfobacca 21 2
Desulfobacter 5 22
Desulfobacterium 122 1
Desulfobacula 3
Desulfobaculum 8
Desulfobotulus 10
Desulfobulbus 36 1
Desulfocapsa 1 1
Desulfocarbo 69
Desulfocella 1 134
Desulfococcus 3 4
Desulfocurvus 1
Desulfofaba 21
Desulfofarcimen 4
Desulfofrigus 16 20
Desulfofustis 12
Desulfoglaeba 108
Desulfohalobium 3 2
Desulfomicrobium 97 18
Desulfomonile 4 41
Desulfonatronobacter 3
Desulfonatronovibrio 4 51
Desulfonatronum 22 65
Desulfonauticus 5 13
Desulfonema 14
Desulfonispora 49
Desulfoplanes 8
Desulforegula 29
Desulforhabdus 1
Desulfosalsimonas 2
Desulfosarcina 12 14
Desulfosoma 55
Desulfosporosinus 1 106 1 121
Desulfotalea 1 1
Desulfothermus 3
Desulfotomaculum 2 316 10 126
Desulfovibrio 409 359 16 189
Desulfovirga 6
Desulfurella 2 2
Desulfuribacillus 3
Desulfurispira 2
Desulfurispirillum 61
Desulfurispora 223 108
Desulfurivibrio 2 1
Desulfurobacterium 4 1
Desulfurococcus 1
Desulfuromonas 29 11
Desulfuromusa 2 110
Dethiobacter 1 6 26
Dethiosulfatibacter 124
Dethiosulfovibrio 50 113
Devosia 1 27 86
Devriesea 1
Dialister 517 364 13 139
Diaphorobacter 1 3
Dichelobacter 1
Dichotomicrobium 5
Dickeya 8 1 10
Dictyoglomus 30 1
Dielma 331 235 9 2
Dientamoeba 1
Dietzia 3 55 16
Dinoroseobacter 1
Diplorickettsia 12
Diplosphaera 8
Dissulfuribacter 7
Dokdonella 8 100
Dokdonia 11 4
Dolichospermum 149
Dolosicoccus 2
Dolosigranulum 4 76
Dongia 94
Dorea 828 408 38 240
Doritaenopsis 1
Draconibacterium 9 1
Duganella 1 2
Duncaniella 4
Duodenibacillus 8 1
Dyadobacter 34 84
Dyella 2 2
Dysgonomonas 11 266 4 179
Echinicola 27 4
Echinops 1
Ectothiorhodosinus 3
Ectothiorhodospira 16 69
Edaphobacter 27
Edwardsiella 9 7
Effusibacillus 88
Eggerthella 607 308 25 190
Eggerthia 2 139
Egibacter 1
Egicoccus 1
Ehrlichia 9 70
Eikenella 11 4 1
Eionea 1
Eisenbergiella 545 279 23 2
Eisenibacter 48
Ekhidna 1
Elizabethkingia 21 6
Elstera 2
Elusimicrobium 7 28 2
Emcibacter 61
Empedobacter 8 1
Emticicia 73 2 171
Enchytraeus 1
Endobacter 1
Endomicrobium 1
Endozoicomonas 1
Enhydrobacter 1
Enorma 35 46 3
Ensifer 1 1
Enterobacter 223 23 9 113
Enterococcus 152 71 29 201
Enterorhabdus 283 136 7 3
Enterovibrio 1
Entomoplasma 12 10
Epibacterium 1
Epulopiscium 63 4 1
Ercella 108 1
Ereboglobus 3
Eremococcus 10 2
Erinaceus 1
Erwinia 1 78 1 78
Erysipelatoclostridium 801 413 36 9
Erysipelothrix 256 3 183
Erythrobacter 8 30
Escherichia 1 17 10 174
Ethanoligenens 332 117
Eubacterium 168 401 39 234
Eucorethra 1
Eudoraea 33
Euglena 1
Euryhalocaulis 7
Euzebya 14 111
Euzebyella 1
Exiguobacterium 17 7
Extensimonas 1
Ezakiella 22 1
Fabibacter 6
Facklamia 56 296 29
Faecalibacterium 819 401 37 243
Faecalibaculum 1
Faecalicatena Sakamoto et al. 2017 22
Faecalicoccus 248 4 1
Faecalitalea 50 19 7
Falcatimonas 1 15
Falsiporphyromonas 116
Fangia 14
Fastidiosipila 81 29 2 3
Fenollaria 211 5 1
Fergusonia 1 6
Fermentimonas 4
Ferrimicrobium 2 5
Ferrimonas 25 2
Ferrithrix 72
Ferrovibrio 2
Ferrovum Johnson et al. 2014 1
Ferruginibacter 1 31
Fervidibacterium 8
Fervidicella 4
Fibrella 3
Fibrobacter 96 76 20
Fictibacillus 18 4
Filifactor 2 127 19 71
Filimonas 1 4
Fimbriimonas 15 2
Finegoldia 473 291 6 120
Fischerella 1
Flagellimonas 1
Flammeovirga 21 63
Flavicella 4
Flaviflexus 8 3
Flavihumibacter 2
Flavisolibacter 1 1 9
Flavitalea 1 5
Flavivirga 1
Flavobacterium 428 22 13
Flavonifractor 815 399 33 10
Flectobacillus 44
Flexibacter 1 2 2
Flexistipes 26 1
Flexithrix 7
Flexivirga 1
Flintibacter 26
Fluoribacter 1
Fluviicola 14 3 1
Fluviimonas 146
Fodinibius 2
Fodinicurvata 188 1
Fontibacter 9
Fonticella 2 46
Formosa 5
Fournierella 1 16
Francisella 19 15
Franconibacter 3
Frankia 4
Frateuria 1 1
Fremyella 2
Fretibacter 14
Fretibacterium 103 1
Friedmanniella 12 4
Frigoribacterium 1 1
Frischella 1 3
Frondicola 1
Fructobacillus 16 19
Fuchsiella 4
Fucophilus 1
Fulvitalea 32
Fulvivirga 42
Fusibacter 79 16
Fusicatenibacter 799 397 18 1
Fusobacterium 141 185 4 104
Gabonibacter 10
Gaetbulibacter 1
Gaiella 2 20
Galenea 17
Gallaecimonas 3
Gallibacterium 1 15 5
Gallicola 76 29 1
Gallionella 14 29
Garciella 4
Gardnerella 44 45 2 12
Garritya 2
Gelria 228 1
Gemella 185 194 4 204
Geminicoccus 1 27
Geminocystis 1
Gemmata 1 4 5
Gemmatimonas 11 3
Gemmatirosa 2 1
Gemmiger 360 18
Geoalkalibacter 1
Geobacillus 6 20 12 81
Geobacter 18 16
Geodermatophilus 6 2
Geofilum 37
Geopsychrobacter 4
Georgenia 11 3
Geosporobacter 4
Geothermobacter 1
Geothrix 136 105
Geovibrio 1 8
Gibbsiella 4
Giesbergeria 1 1
Gilliamella 1
Gillichthys 1
Gillisia 13 133
Gilvimarinus 1
Gimesia 2
Glaciecola 36 42
Glaciimonas 2
Glaesserella 1
Globicatella 2 12
Gloeobacter 6 1
Gluconacetobacter 6 1
Gluconobacter 1 33
Glutamicibacter 30
Glycera 1
Glycocaulis 1 1
Glycomyces 7 17
Gorbachella 1 1
Gordonia 4 33 5
Gordonibacter 481 222 26 6
Gottschalkia 56 4
Gracilibacillus 44
Gracilibacter 3 191 3
Gracilimonas 115
Gramella 3 33
Granulibacter 4
Granulicatella 363 33 92
Granulicella 5 10
Granulosicoccus 33 1
Gryllotalpicola 4 1
Guggenheimella 146
Gullanella 2
Gymnocintractia 1
Gynuella 18 1
Haematobacter 3 3
Haematospirillum 2
Haemophilus 574 305 16 184
Hafnia 13 1
Hahella 78 23
Halanaerobacter 1 3
Halanaerobaculum 3
Halanaerobium 3 45
Halarsenatibacter 29
Haliangium 1 14 17
Haliea 1 6
Halioglobus 1 1
Haliscomenobacter 35 3
Halobacillus 11 4
Halobacteriovorax 19 4
Halobacteroides 3 1
Halocella 5 4
Halochromatium 87 21
Halodesulfovibrio 3
Haloferax 1
Haloferula 16
Halolactibacillus 4
Halomicronema 1 3
Halomonas 1 176 1 39
Halonatronum 2
Haloplasma 1 9
Halopolyspora 60
Halorhodospira 24 10
Halospina 7
Halospirulina 1
Halotalea 1
Halothermothrix 61 1
Halothiobacillus 18 2
Halyseosphaera 1
Hartmannibacter 1
Hathewaya 225
Hazenella 10
Helcococcus 22 59 24
Heleococcum 1
Helicobacter 4 14 74
Heliimonas 3
Heliobacterium 3 1
Heliomonas 1
Heliophilum 5
Heliorestis 3 87
Heliothrix 1
Hellea 4
Henriciella 179
Heratemis 1
Herbaspirillum 270 23 13 102
Herbinix 155 6 4
Herminiimonas 79 7
Herpetosiphon 4
Hespellia 523 385 16
Hippea 2 1
Hirschia 1
Histophilus 4 1
Hoeflea 1
Holdemanella 240 4 3
Holdemania 604 335 23 210
Holophaga 1
Hoppeia 2
Howardella 137 279 4
Hoyosella 19
Hugenholtzia 13
Humibacter 7
Hungateiclostridium 4
Hungatella 375 34 5
Hwangdonia 6
Hydrocarboniphaga 1 166
Hydrocoleum 1
Hydrogenibacillus 32 5
Hydrogenispora 207
Hydrogenoanaerobacterium 240 343
Hydrogenobacter 1 2
Hydrogenobaculum 4
Hydrogenophaga 1 2
Hydrogenophilus 3 82 92
Hydrogenothermus 5
Hydrotalea 1 12
Hylemonella 1
Hymenobacter 3 15 146
Hyphomicrobium 2 6 33
Hyphomonas 4 22
Iamia 1 2
Ianmoorea 3
Icaria 1
Ichthyobacterium 1
Ideonella 2
Idiomarina 5 15
Ignatzschineria 5
Ignavibacterium 23 20
Ignavigranum 2 40
Ihubacter 29
Ileibacterium 3
Ilumatobacter 34
Ilyobacter 4
Immundisolibacter 3
Imperialibacter 23
Indibacter 9
Indioceanicola 3
Inquilinus 5 3
Insolitispirillum 110
Intestinibacillus 9
Intestinibacter 817 353 21 2
Intestinimonas 765 390 37 10
Iodobacter 2 3
Isochromatium 2
Janibacter 2 1 2
Jannaschia 1 1
Janthinobacterium 4 6
Jatropha 1
Jatrophihabitans 3 1
Jeotgalibaca 3
Jeotgalibacillus 2
Jeotgalicoccus 2 25 3
Jiangella 1 6
Johnsonella 17 288 213
Jonesia 35 2
Jonquetella 11 45 1
Kaistia 17 2
Kallipyga 31 1
Kallotenue 8
Kandleria 65
Kangiella 18 1
Kastovskya 3
Keratinibaculum 5
Ketobacter 1
Ketogulonicigenium 1 1
Kiloniella 23 3
Kineococcus 4 2
Kineosporia 3
Kinetoplastibacterium 3
Kingella 12 2 2
Kistimonas 1
Kitasatospora 3 12
Klebsiella 158 33 7 65
Kluyvera 575 4 5
Kockovaella 1
Kocuria 14 14 12
Komagataeibacter 16 2
Kordia 1
Kordiimonas 2
Koreibacter 2
Kosakonia 96 3
Kosmotoga 1 5
Kozakia 1 3
Kribbella 110 21
Kushneria 1 3 55
Kutzneria 1
Kyrpidia 52 1
Kytococcus 2 2
Labilibacter 2
Labilithrix 27
Labrenzia 1
Labrys 1
Laceyella 4 21
Lachnoanaerobaculum 23 390 4
Lachnobacterium 13 293 29 202
Lachnoclostridium 401 39 9
Lachnospira 757 370 35 240
Lachnotalea 3
Lacibacter 3 2
Lacibacterium 60
Lacihabitans 4
Lacimicrobium 1
Lacinutrix 1 3
Lactobacillus 618 386 21 219
Lactococcus 286 227 10 111
Lactonifactor 504 265 29
Lacunisphaera 3
Lamprocystis 2
Laribacter 1 3
Lautropia 20 17 5
Lawsonella 1
Lawsonia 241 5
Lebetimonas 6
Lecanora 1
Legionella 1 22 145
Leifsonia 2 1 1
Leisingera 1
Lelliottia 4
Leminorella 1
Lentibacillus 25 34
Lentisphaera 3
Lentzea 3
Leptolinea 36
Leptolyngbya 2 1 57
Leptonema 6
Leptospira 6 84
Leptospirillum 10 1
Leptothrix 43
Leptotrichia 43 23 15
Leucobacter 19 5
Leuconostoc 88 295 4 112
Leucothrix 2 10
Levilinea 1
Levyella 164 1
Lewinella 7 19
Libanicoccus 1 1
Liberibacter 6 1
Limibacillus 17
Limibacter 2
Limimonas 3
Limisphaera 2
Limnobacter 1 14 160
Limnobaculum 1
Limnochorda 2 1
Limnohabitans 2 3
Limnoraphis 2
Lishizhenia 1
Listeria 1 126 52
Litoribacillus 38
Litoribacter 10
Litoribrevibacter 5
Litoricola 21 6
Litorilinea 7
Litorilituus 33 4
Loktanella 5 1
Longilinea 1 1
Longimonas 30
Lucinoma 1
Ludwigia 1
Luminiphilus 28
Luna cluster 1 3
Lunatimonas 1
Luteibacter 1 30 121
Luteibaculum 1
Luteimonas 5 6
Luteipulveratus 1
Luteitalea 1
Luteivirga 3
Luteococcus 6
Luteolibacter 1 13 105
Lutibacter 1 13 4
Lutispora 102 1
Lutra 1
Lyme Disease Borrelia 3
Lysinibacillus 9 6 38
Lysinimonas 1
Lysobacter 2 41 51
MAC 2
Macrococcus 1 6 106
Madoqua 1
Mageeibacillus 1
Magnetococcus 6 1
Magnetospira 3 1
Magnetospirillum 4 2
Magnetovibrio 3
Mahella 16
Malassezia 2
Maledivibacter 15
Mangrovibacter 1
Mangroviflexus 2
Mannheimia 8 37 86
Maribacter 1 5
Maricaulis 8 1
Marichromatium 1 7 41
Marinicauda 1
Marinicella 8
Marinifilum 100
Mariniflexile 3 4
Marinilabilia 19 1
Marinilactibacillus 4
Marinimicrobium 1
Marininema 1
Mariniphaga 15
Mariniradius 7
Marinitalea Kim et al. 2011 1
Marinithermofilum 2
Marinithermus 1
Marinitoga 1 6
Marinobacter 79 10
Marinobacterium 19 4
Marinococcus 4 14
Marinomonas 19 5
Marinoscillum 23
Marinospirillum 22 43
Marinovum 1
Mariprofundus 12 1
Marispirillum 33
Maritalea 1
Maritimibacter 1
Marivirga 2 1
Marivivens 1
Marixanthomonas 13
Marmoricola 10 1
Marseillibacter 1 36
Martelella 2
Marvinbryantia 636 361 3 4
Massilia 7 13 20 4
Massilioclostridium 1 24
Massiliprevotella 3
Mechercharimyces 7 2
Mediterranea 3
Megamonas 69 116 2 43
Meganema 14
Megasphaera 566 248 208
Meiothermus 1 11 100
Meiracyllium 1
Melaminivora 1
Melghiribacillus 3
Melghirimyces 20
Melioribacter 268 11 4
Melissococcus 1 7
Melitea 1
Melittangium 5 1
Meniscus 14
Merdibacter 1 7
Mesoaciditoga 1
Mesoflavibacter 1
Mesonia 6
Mesoplasma 12 113
Mesorhizobium 10 4 4
Mesotoga 1
Metabacterium 1 2
Metakosakonia 1
Metallibacterium 1
Metallosphaera 5
Metaprevotella 3
Methanobrevibacter 227 108 4 81
Methanocorpusculum 1 1 1
Methanolinea 1
Methanomassiliicoccus 26 17
Methanomethylophilus 23
Methanosphaera 40 14 2 17
Methylacidimicrobium van Teeseling et al. 2014 1
Methylarcula 12
Methylibium 3
Methylobacillus 45 97
Methylobacter 5
Methylobacterium 9 18 24
Methylocaldum 2 4
Methyloceanibacter 1
Methylocella 4 10
Methylococcus 1
Methylocystis 5 2
Methylogaea 1 29
Methyloglobulus 30
Methylohalobius 9
Methylohalomonas 5
Methyloligella 2
Methylomagnum 4
Methylomarinovum 9
Methylomicrobium 4 3
Methylomonas 6 3
Methylomusa 4
Methylonatrum 2 130
Methyloparacoccus 2
Methylophaga 81 9
Methylophilus 11
Methylorubrum 4
Methylosinus 6
Methylosoma 1
Methylosphaera 4
Methylotenera 39 3
Methylothermus 1
Methyloversatilis 33 8
Methylovulum 1
Micavibrio 3
Microaerobacter 13
Microbacter 98
Microbacterium 11 102 53
Microbulbifer 6
Micrococcus 10 2 3
Microcoleus 35
Microcystis 4
Microlunatus 20 1
Micromonospora 4 13
Micropruina 1 1
Microscilla 1
Microterricola 4
Microtetraspora 2 3
Microthrix 1
Microvirga 1 4 2
Microvirgula 2
Millisia 1
Miniimonas 1
Mitsuaria 3
Mitsuokella 18 38 3 108
Mixta 1
Mizugakiibacter 7
Mobilitalea 58 2
Mobiluncus 129 144 1 29
Modestobacter 2 50
Modicisalibacter 1
Mogibacterium 529 293 1 195
Moheibacter 10
Mongoliicoccus 8
Mongoliitalea 1
Monoglobus 4
Moorea 31 1
Mooreia 2
Moorella 13 176
Moraxella 14 115 5
Mordavella 1 6 4
Morganella 4 86 29
Moritella 1 1
Moryella 700 324 4 35
Mucilaginibacter 23 5 4
Mucinivorans 24 1
Mucispirillum 3 2
Murdochiella 247 1 4
Muribaculum 4
Muricauda 1 9
Muriicola 1
Murimonas 374 3
Myceligenerans 7
Mycobacterium 32 21 57
Mycobacterium chelonae complex 2
Mycobacterium complex 2
Mycobacterium fortuitum complex 3
Mycoplana 1
Mycoplasma 10 255 1 186
Myroides 10 8
Myxobotrys 1 13
Myxococcus 1
Nafulsella 6
Nakamurella 2 3
Nannocystis 10 11
Nanoscypha 1
Natranaerobaculum 3
Natranaerobius 10 1
Natranaerovirga 256 7
Natribacillus 1
Natroniella 3
Natronincola 39 191
Naumannella 7
Nautilia 5 1
Ndongobacter 1
Necropsobacter 8
Negativibacillus 1 29 1
Negativicoccus 131 110 79
Neglecta 1
Neisseria 82 25 11 38
Neoasaia 1 1
Neochlamydia 1
Neorhizobium 4
Neorickettsia 1 6
Neoscardovia 35
Neptuniibacter 2
Neptunomonas 1
Nereis 1
Nesterenkonia 47 7
Nevskia 1 3 9
Niabella 1 296 58
Niastella 1 3 1
Nibribacter 25
Nicoletella 4
Nigella 1
Nisaea 15
Nitratifractor 2
Nitratireductor 4
Nitratiruptor 1 1
Nitriliruptor 5
Nitrincola 1
Nitrobacter 3 1
Nitrococcus 13
Nitrolancea 4
Nitrosococcus 1 15 35
Nitrosomonas 2 134 5 3
Nitrosopumilus 1
Nitrososphaera 1 1
Nitrosospira 1 3 1
Nitrospina 2
Nitrospira 1 2
Nitrospirillum 3 1
Niveispirillum 91 1
Nocardia 3 4
Nocardioides 3 48 4
Nocardiopsis 17 5
Nodularia 1 34
Nonomuraea 13 41
Nosocomiicoccus 6
Novibacillus 8 4
Noviherbaspirillum 12
Novispirillum 63 121
Novosphingobium 7 17 6
Oblitimonas 1
Oceanibaculum 1
Oceanibulbus 1 2
Oceanicoccus 24 1
Oceanimonas 2 1
Oceanirhabdus 3
Oceanithermus 1
Oceanobacillus 13 4
Oceanobacter 1
Oceanospirillum 29 4
Oceanotoga 1
Ochrobactrum 28 3 21
Octadecabacter 2 3
Odoribacter 622 343 33 209
Oenococcus 34 58
Oerskovia 1
Ohtaekwangia 30
Okeania 2
Oleibacter 3
Oleiphilus 3
Oleispira 1
Oleomonas 22
Oligella 8 10 20
Oligosphaera 15
Oligotropha 1
Olivibacter 3 168
Olleya 4
Olsenella 64 206 9 21
Opitutus 1 5 5
Orbus 2
Orenia 19
Oribacterium 41 396 28 195
Orientia 54 1
Ornatilinea 4
Ornithinicoccus 1 2
Ornithinimicrobium 4
Ornithobacterium 3 4
Orrella 1
Oscillatoria 58
Oscillibacter 742 400 38 13
Oscillospira 622 1 32 233
Osmadenia 1
Otariodibacter 10
Ottowia 3
Owenweeksia 1 1
Oxalicibacterium 52
Oxalobacter 135 8 112
Oxalophagus 1 18
Oxobacter 5 105
Oxynema 2
Paenalcaligenes 1 1
Paenarthrobacter 1 1
Paenibacillus 1 328 13 75
Paeniclostridium 42 4
Paeniglutamicibacter 1
Paenisporosarcina 30 5
Pagothenia 1
Paludibacter 42 3 7
Paludibacterium 2
Paludibaculum 5
Paludisphaera 3
Panacagrimonas 2
Pandoraea 12 5
Pannonibacter 4
Panonychus 1
Pantoea 188 58 1 12
Papillibacter 418 216 29
Parabacteroides 762 411 37 243
Paraburkholderia 40 1 4
Parachlamydia 1 1
Paraclostridium 21
Paracoccus 1 20 9
Paraeggerthella 15 41
Parafilimonas 26
Parageobacillus 4 1
Paraglaciecola 5 1
Paraliobacillus 3
Parapedobacter 13 81
Paraperlucidibaca 1
Paraphotobacterium 1
Paraprevotella 212 346 8 181
Pararhodospirillum 1 1
Parasaccharibacter 11 1
Parascardovia 4 3 67
Parasegetibacter 2
Parashewanella 1
Parasporobacterium 170 177 17
Parasutterella 596 382 24 6
Parolsenella 1
Parvibacter 94 25 1
Parvibaculum 1
Parvimonas 96 83 5
Parvularcula 6 1
Pasteurella 20 11 18
Pasteuria 9
Patulibacter 2 1
Paucibacter 2 10
Paucimonas 2
Pectinatus 62 1 181
Pectobacterium 3 27 4
Pediococcus 34 54 141
Pedobacter 4 143 23 217
Pedomicrobium 1 1 5
Pelagibaca 1
Pelagibacterium 1
Pelagibius 2
Pelagicoccus 28 65
Pelistega 1 2
Pelobacter 19 8
Pelodictyon 1
Pelolinea 3 1
Pelomonas 20 4 2
Pelosinus 116 4
Pelospora 22
Pelotomaculum 40 95
Peptoanaerobacter 14
Peptoclostridium 665 60 1
Peptococcus 406 167 5 213
Peptoniphilus 439 334 6 216
Peptostreptococcus 206 167 2 59
Perameles 1
Peredibacter 4
Perexilibacter 17
Perlucidibaca 3
Permianibacter 20
Persephonella 1
Persicirhabdus 9
Persicitalea 29
Persicobacter 5 4
Petrimonas 11 4
Petrotoga 2
Phaeobacter 9
Phaeobacterium 6
Phaeochromatium 6
Phaeocystidibacter 7
Phaeodactylibacter 8
Phascolarctobacterium 556 362 19 219
Phaseolibacter 2
Phenylobacterium 2 11 12
Phocaeicola 1 98
Phocea 11
Phoenicibacter 1
Photobacterium 1 12
Photorhabdus 46 4
Phreatobacter 1 1
Phycicoccus 1
Phycisphaera 2 1
Phyllobacterium 30 1
Phytoactinopolyspora 1
Phytomonospora 18
Pigmentiphaga 15
Pilibacter 12
Pilimelia 1 6
Pimelobacter 3
Pirellula 9 1
Pisciglobus 15
Piscinibacter 3
Piscirickettsia 8 1
Planctopirus 1 1
plane trees 1
Planifilum 1 8 124
Planktomarina 2
Planktophila 1 2
Planktothrix 3
Planococcus 36 44
Planomicrobium 38 3 7
Plantibacter 1 1
Plasticicumulans 68
Pleionea 1
Pleomorphomonas 4 1
Plesiocystis 3
Pleurocapsa 1
Pleuronectes 1
Pluralibacter 16 3
Polaribacter 1 8
Polaromonas 1 6
Polycladomyces 19
Polymonas 1 11
Polymorphobacter 2
Polymorphum 2
Polynucleibacter 42
Pontibacillus 74 56
Pontibacter 1 9 104
Ponticaulis 2
Pontivivens 1
Porphyrobacter 1 1 1
Porphyromonas 366 335 15 201
Portibacter 2
Porticoccus 1
Portiera 1
Povalibacter 1
Pragia 125 4
Prauserella 2
Prevotella 480 413 23 237
Prochlorococcus 2 5
Prochlorothrix 1
Prognathochromis 1
Prolixibacter 3
Promicromonospora 1 3
Propionibacterium 121 15 9 13
Propionicimonas 1 4
Propioniferax 3 73
Propionigenium 3 9
Propionimicrobium 11
Propionispira 2 14
Propionispora 36 162
Propionivibrio 2 17 11
Prosthecobacter 14 43
Prosthecochloris 1 4
Proteiniborus 105
Proteiniclasticum 1
Proteiniphilum 40 13 4
Proteinivorax 40
Proteocatella 70 3
Proteus 17 49 1 10
Protochlamydia 1
Providencia 89 13
Pseudacidovorax 2
Pseudaeromonas 19
Pseudaminobacter 1
Pseudanabaena 4
Pseudarcicella 25 1
Pseudarthrobacter 1
Pseudoalteromonas 14
Pseudobacteroides 8
Pseudobutyrivibrio 833 250 27 211
Pseudochrobactrum 1 5 2
Pseudoclavibacter 53 150 11
Pseudoclostridium 4
Pseudodesulfovibrio 4
Pseudoduganella 6
Pseudoflavitalea 4
Pseudoflavonifractor 497 349 31 5
Pseudofulvibacter 1
Pseudofulvimonas 1
Pseudoglutamicibacter 6
Pseudohongiella 4 1
Pseudokineococcus 7
Pseudolabrys 1
pseudomallei group 4
Pseudomaricurvus 2
Pseudomonas 70 178 4 59
Pseudomonas chlororaphis group 4
Pseudonocardia 10 11
Pseudooceanicola 1
Pseudopedobacter 99 1 1
Pseudopropionibacterium 6 1
Pseudoramibacter 3 53 95
Pseudorhodobacter 58
Pseudorhodoferax 1
Pseudorhodoplanes 1
Pseudoscardovia 261
Pseudoscillatoria 178
Pseudospirillum 1
Pseudothermotoga 4
Pseudovibrio 2 1
Pseudoxanthobacter 2
Pseudoxanthomonas 6 22 4
Psychrilyobacter 10
Psychrobacter 2 66 100
Psychroflexus 19 23
Psychromicrobium 1
Psychromonas 15 7
Psychroserpens 2 2
Psychrosinus 9
Psychrosphaera 2
Pullulanibacillus 52 2
Puniceicoccus 51 31
Pusillimonas 3 1
Pyramidobacter 50 16
Pyrenomonas 1
Pyrinomonas 20
Pyxicoccus Reichenbach 2005 1
Qipengyuania 1
Quadrisphaera 1
Rahnella 11 1
Ralstonia 16 6 12
Ramlibacter 3 2
Raoultella 32 5
Raoultibacter 11
Raphidiopsis 3
Rapidithrix 6
Rarobacter 31
Rathayibacter 2 1 2
Rehaibacterium 2
Reichenbachiella 6
Reinekea 79
Renibacterium 1
Renobacter 4
Reyranella 6
Rhabdochromatium 8
Rheinheimera 4 38 2
Rhizobacter 6
Rhizobium 13 21 5 6
Rhizomicrobium 8
Rhodanobacter 28 1
Rhodobaca 1
Rhodobacter 4 2 26
Rhodobium 1
Rhodococcus 24 2 29
Rhodocyclus 1
Rhodocytophaga 1 21
Rhodoferax 2 17
Rhodoluna 3
Rhodomicrobium 3 1
Rhodonellum 17
Rhodopila 1
Rhodopirellula 1 1
Rhodoplanes 1 1 10
Rhodopseudomonas 5 11 3
Rhodospira 4
Rhodospirillum 1 2 106
Rhodothalassium 18 5
Rhodothermus 2 196
Rhodovibrio 22 47
Rhodovulum 3 19 4
Rickettsia 82 136
Rickettsiella 8
Riemerella 3 3
Rikenella 2 2 10
Risungbinella 13
Rivibacter 1
Rivicola 3
Rivularia 20
Robiginitalea 1 1
Robiginitomaculum 3
Robinsoniella 180 308 33
Rodentibacter 1
Romboutsia 548 352 3 1
Roseateles 3 1
Roseburia 837 401 39 241
Roseiarcus 3
Roseibacterium 1 1
Roseiflexus 7 1
Roseimarinus 4
Roseimicrobium 17
Roseitalea 1
Roseivirga 26
Roseivivax 2
Rosenbergiella 79
Roseobacter 3
Roseococcus 1 7 7
Roseomonas 4 8 26
Roseospira 6 26
Roseovarius 1 2 3
Rothia 158 10 24 63
Rubellimicrobium 3 8 4
Rubidibacter 2
Rubidimonas 26
Rubinisphaera 3
Rubribacterium 1
Rubritalea 70 75
Rubritepida 1
Rubrivivax 2 2
Rubrobacter 1 20 5
Rudaea 4
Rudanella 2
Ruegeria 1
Rufibacter 22 3
Ruminiclostridium 34 401 38 8
Ruminobacter 32 1
Ruminococcus 387 39 244
Rummeliibacillus 1 20 1
Runella 38 83
Ruthenibacterium 1 33 5
Saccharibacillus 10
Saccharibacter 8
Saccharicrinis 31
Saccharimonas 20
Saccharofermentans 72 2
Saccharomonospora 86 1
Saccharophagus 1
Saccharopolyspora 29 74
Saccharospirillum 5
Saccharothrix 1 1
Sagittula 1
Saguinus 1
Salegentibacter 4
Salibacterium 4
Salimicrobium 11 3
Salinibacillus 18
Salinibacter 1
Salinibacterium 1
Salinicoccus 40 118
Salinicola 1 1
Salinimicrobium 1 1
Salinimonas 4
Salinisphaera 11 1
Salinispira 4
Salinispirillum 89
Salinivenus 1
Salinivibrio 17 3
Salinivirga 1
Salipiger 1
Salisaeta 35 41
Salmonella 4 4 20 41
Sambucus 1
Sandaracinobacter 1
Sandaracinus 4 1
Sanguibacter 1 1
Saprospira 1
Sarcina 810 144
Scardovia 9 20 10
Schaalia 4
Schlegelella 3 2 4
Schleiferia 8
Schlesneria 1
Schumannella 1
Schwartzia 6
Scytonema 4
Sebaldella 1 23
Sedimentibacter 2 88 213
Sedimenticola 7 3
Sedimentisphaera 3
Sedimentitalea 1
Sediminibacillus 1
Sediminibacterium 1 13
Sediminicola 1
Sediminispirochaeta 1
Sediminitomix 35
Segetibacter 22 30
Segniliparus 15 1
Seinonella 8
Selenihalanaerobacter 37
Selenomonas 23 50 8 208
Sellimonas 1
Seminibacterium 1
Senegalimassilia 230 146 14 2
Seonamhaeicola 3
Serinibacter 1
Serinicoccus 8 7
Serpentinomonas 2
Serpula Stanton et al. 1991 14 19
Serratia 8 58 3 172
Sharpea 8 91
Shewanella 64 148
Shigella 1 146 6
Shimazuella 1 6
Shimia 1
Shimwellia 1
Shinella 6 4 4
Shivajiella 1
Shuttleworthia 261 285 146
Siansivirga 1 3
Sideroxydans 1
Silanimonas 13
Silicimonas 1
Simiduia 10 1
Simkania 6 1
Simonsiella 3
Simplicispira 3
Singulisphaera 1 3 5
Sinibacillus 30
Sinobaca 1
Sinobacterium 47
Sinomonas 5 1
Sinorhizobium 5
Sinorhizobium fredii group 4
Sinorhizobium/Ensifer group 1 4
Sinosporangium 4
Siphonobacter 15
Skermanella 1 19 97
Slackia 273 240 19 194
Smithella 4 1
Sneathia 10 39 6
Sneathiella 3
Snodgrassella 1
Snowella 6
Sodalis 4
Soehngenia 1 9
Solimonas 4
Solirubrobacter 1 10 4
Solitalea 17 1
Solobacterium 103 57 2 2
Sorangium 2 1 4
Sphaerimonospora 3
Sphaerobacter 2
Sphaerochaeta 2
Sphaerospermopsis 1
Sphingobacterium 4 85 3 217
Sphingobium 8 27 22
Sphingomicrobium 6
Sphingomonas 24 206 14 35
Sphingopyxis 3 11 4
Sphingorhabdus 3 1
Sphingosinicella 1 4
Spiribacter 8 4
Spirilliplanes 2
Spirillum 14
Spirochaeta 12
Spiroplasma 165 4
Spirosoma 4 5
Spirulina 3
Spongitalea 1
Sporacetigenium 59
Sporanaerobacter 6 1 4
Sporichthya 6 2
Sporisorium 1
Sporobacter 429 367 11
Sporobacterium 1 240 1
Sporocytophaga 2
Sporohalobacter 7
Sporolactobacillus 3 51
Sporomusa 91
Sporosalibacterium 23
Sporosarcina 330 23 27
Sporotomaculum 72 116
Stackebrandtia 55 1
Stanieria 1
Staphylococcus 232 87 2 96
Stappia 1
Starria 41
Stella 89
Stenotrophomonas 30 21 33
Stenoxybacter 4
Steroidobacter 9 2
Sterolibacterium 4
Stigmatella 11 1
Stomatobaculum 18 170 1
Streptacidiphilus 8
Streptobacillus 2 31 3
Streptococcus 832 395 39 240
Streptohalobacillus 3
Streptomonospora 112
Streptomyces 79 2 45
Streptosporangium 5 6
Subdoligranulum 828 397 22 6
Subsaximicrobium 1
Succinatimonas 6 33
Succiniclasticum 37 100 5 13
Succinimonas 34
Succinispira 46
Succinivibrio 9 49 60
Sufflavibacter 1
Sulcia 1 2
Sulfobacillus 15 13
Sulfuricaulis 3
Sulfuricella 1
Sulfuricurvum 3
Sulfuriferula 2
Sulfuriflexus 1
Sulfurifustis 3 1
Sulfurihydrogenibium 1
Sulfurimonas 1 1
Sulfurisoma 2
Sulfuritalea 1
Sulfurivirga 7
Sulfurospirillum 1 12
Sulfurovum 1 1
Sungkyunkwania 1
Sunxiuqinia 22
Sutterella 556 385 30 240
Suttonella 10
Swaminathania 1
Symbiobacterium 6 147
Symploca 4
Synechococcus 3 3
Synergistes 15 4 4
Syntrophaceticus 17
Syntrophobacter 6 2
Syntrophobotulus 6 1
Syntrophococcus 31 237 11
Syntrophomonas 3 162 42
Syntrophorhabdus 16
Syntrophothermus 16 1
Syntrophus 11 3
Taeniopygia 1
Taibaiella 1 26
Tamilnaduibacter 11
Tamlana 2 1
Tangfeifania 6
Tannerella 11 138 6
Tanticharoenia 1
Taonella 1
Tapinothrix 6
Tardiphaga 1
Tateyamaria 1
Tatumella 3 1
Taylorella 4 1
Telmatocola 1
Telmatospirillum 14 15
Temperatibacter 1
Tenacibaculum 3 30
Tenuibacillus 5
Tepidamorphus 1
Tepidanaerobacter 8 91
Tepidibacillus 26
Tepidibacter 48 68
Tepidimicrobium 148 1 16
Tepidimonas 13 17 1
Terasakiella 1
Terasakiispira 2
Teredinibacter 1
Terrabacter 1
Terracoccus 1
Terribacillus 13 1 4
Terriglobus 4 4
Terrimonas 19
Terrisporobacter 638 324 6 2
Tessaracoccus 24 72 1
Tetragenococcus 2 49 137
Tetrasphaera 7
Texcoconibacillus 60
Thalassococcus 3
Thalassolituus 1
Thalassomonas 7
Thalassospira 390 3 58
Thalassotalea 38 1
Thauera 33 41
Thermacetogenium 8 1
Thermaerobacter 18 4
Thermanaeromonas 1 3
Thermanaerothrix Gregoire et al. 2011 1
Thermanaerovibrio 1 1
Thermasporomyces 9
Thermicanus 1 203 172
Thermincola 1 13 3
Thermoactinomyces 77 7
Thermoanaerobacter 15 72
Thermoanaerobacterium 3 38
Thermoanaerobaculum 37
Thermobacillus 5 7
Thermobaculum 36 47
Thermobifida 1
Thermobispora 4 1
Thermoclostridium 4
Thermococcus 2
Thermocrinis 3 1
Thermodesulfatator 1 32
Thermodesulfobacterium 1
Thermodesulfobium 6 2 1
Thermodesulforhabdus 17
Thermodesulfovibrio 6 34
Thermoflexibacter 47
Thermogemmatispora 5 16
Thermogutta 10 1
Thermogymnomonas 9
Thermohalobacter 9
Thermohydrogenium 16
Thermoleophilum 18
Thermolithobacter 18
Thermolongibacillus 26
Thermomarinilinea 12
Thermomicrobium 1
Thermomonas 5 1 1
Thermomonospora 2
Thermonema 19
Thermophagus 33
Thermopolyspora 2
Thermosediminibacter 13 1
Thermosinus 1
Thermosipho 3
Thermosporothrix 2
Thermosulfidibacter 2
Thermosynechococcus 1
Thermosyntropha 3
Thermotoga 1
Thermotomaculum 5
Thermovenabulum 15 29
Thermovibrio 1
Thermovirga 3
Thermovorax 1
Thermus 14 41
Thioalbus 1
Thioalkalicoccus 5
Thioalkalimicrobium 1 32 26
Thioalkalispira 5
Thioalkalivibrio 20 33
Thiobacillus 1 18 37
Thiobacter 2
Thiocapsa 37 73
Thioclava 1 1
Thiococcus 1
Thiocystis 21 2
Thiofaba 1
Thioflavicoccus 1
Thiohalobacter 1
Thiohalocapsa 38
Thiohalomonas 3
Thiohalophilus 1
Thiohalorhabdus 59 113
Thiohalospira 5
Thiolamprovum 129
Thiolapillus 1
Thiomonas 1 102 59
Thiophaeococcus 6
Thioploca 4
Thioprofundum 5
Thioreductor 3
Thiorhodococcus 8 37
Thiorhodospira 2 8
Thiorhodovibrio 25
Thiothrix 1 35 145
Thiovirga 13 1
Thlaspi 1
Thorsellia 34
Tigriopus 1
Tilapia 1
Tindallia 53 194
Tissierella 44
Tistrella 19 1
Tolumonas 3 59
Tomitella 8
Tomopterna 1
Tonsilliphilus 1 2
Trabulsiella 35
Tranquillimonas 1
Traorella 1
Treponema 1 25 57
Trichococcus 6 6 11
Trichocoleus 2
Trichodesmium 17
Trichormus 1
Tropheryma 30 1
Truepera 1 9
Trueperella 7 8 4
Tsukamurella 1 2 26
Tuberibacillus 6
Tumebacillus 13 1
Tunicatimonas 20
Turicella 3 5
Turicibacter 504 252 10 171
Turneriella 5
Tychonema 118
Tyzzerella 401 36 5
Udeniomyces 1
Uliginosibacterium 43 25
Umboniibacter 1
unclassified Erysipelotrichaceae 4
unclassified Ruminococcaceae 4
Undibacterium 5 10 3
Ureaplasma 10 12 8
Ureibacillus 22 7
Ursidibacter 18
Vagococcus 62 22 14 147
Vallitalea 32 3
Vampirococcus 1
Vampirovibrio 10 1
Varibaculum 276 128 5 45
Variibacter 1 3
Variovorax 1 3 1 10
Veillonella 583 324 25 229
Verminephrobacter 13 1
Verrucomicrobium 34 1
Verrucosispora 2 1
Verticiella 2
Vibrio 31 16
Vibrio harveyi clade 3
Victivallis 301 143 7 1
Virgibacillus 1 17 21
Viridibacillus 9 27
Vitreoscilla 16 2
Vogesella 15 12
Volucribacter 20
Vulcanibacillus 3
Vulcaniibacterium 8
Vulcanithermus 5
Waddlia 1
Websdanea 1
Weeksella 3 1
Weissella 34 262 4 129
Wenyingzhuangia 2 3
Wenzhouxiangella 18 1
Wigglesworthia 4
Woeseia 1
Wohlfahrtiimonas 2
Wolbachia 6
Xanthobacter 2 1 1
Xanthomonas 1 10 11
Xenophilus 2
Xenorhabdus 97 4
Xylanimicrobium 1
Xylanimonas 1
Xylella 5
Xylophilus 2
Yangia 4
Yaniella 1
Yersinia 7 10 2 15
Youngiibacter 59
Youngimonas 4
Zeaxanthinibacter 2
Zhihengliuella 1 2
Zhongshania 21 1
Zhouia 2
Zobellella 33 3
Zobellia 1 4
Zoogloea 2 7
Zopfius 2
Zymobacter 26

kingdom

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zymomonas 1 1
Chlorobionta 21
Fungi 2

no rank

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Not yet classified (Prokaryotae) 226
[Clostridium] aminophilum DSM 10710 1
[Clostridium] bolteae 90A9 1
[Clostridium] cf. saccharolyticum K10 1
[Clostridium] citroniae WAL-17108 4
[Clostridium] clostridioforme 90A7 2
[Clostridium] clostridioforme 90A8 2
[Clostridium] clostridioforme CM201 1
[Clostridium] innocuum 2959 4
[Clostridium] saccharogumia DSM 17460 4
[Clostridium] sphenoides JCM 1415 3
[Clostridium] spiroforme DSM 1552 1
[Clostridium] symbiosum ATCC 14940 1
[Clostridium] symbiosum WAL-14163 2 3
[Clostridium] ultunense Esp 1
[Eubacterium] cellulosolvens 6 1
[Eubacterium] siraeum DSM 15702 1
Abiotrophia defectiva ATCC 49176 1
Absiella dolichum ATCC 29143 2
Accumulibacter 1
Acetobacterium sp. KB-1 1
Acinetobacter lwoffii WJ10621 1
Acinetobacter venetianus VE-C3 1
Actinobaculum sp. oral taxon 183 str. F0552 1
Actinomyces dentalis DSM 19115 1
Actinomyces gerencseriae DSM 6844 1
Actinomyces graevenitzii F0530 2
Actinomyces johnsonii F0542 1
Actinomyces massiliensis 4401292 1
Actinomyces naeslundii Howell 279 2
Actinomyces oris K20 1
Actinoplanes teichomyceticus ATCC 31121 1
Aeromicrobium marinum DSM 15272 1
Aeromonas caviae Ae398 1
Aeromonas hydrophila 4AK4 1
Aeromonas salmonicida subsp. pectinolytica 34mel 1
Agathobaculum desmolans ATCC 43058 3
Aggregatibacter sp. oral taxon 458 str. W10330 1
Alcaligenaceae bacterium YIT 11859 4
Aliivibrio fischeri SR5 1
Alistipes onderdonkii DSM 19147 4
Alistipes putredinis DSM 17216 4
Alistipes senegalensis JC50 3
Alistipes sp. JC136 3
Alloscardovia omnicolens F0580 1
Alteromonadales genera incertae sedis 1
Anabaena 1
Anaerostipes hadrus DSM 3319 1
Aneurinibacillus group 3 1
Angiospermae 21
Anoxybacillus kamchatkensis G10 1
ant endosymbionts 4
ant, tsetse, mealybug, aphid, etc. endosymbionts 1 1
aphid secondary symbionts 1
Aquiflexum balticum DSM 16537 1
Arcobacter cryaerophilus D2610 1
Arcobacter group 4
Arcobacter skirrowii CCUG 10374 1
ATCC 35035 2
ATCC 35423 1 2
ATCC 51140 2
Auraticoccus monumenti 1 1
Bacillales Family XI. Incertae Sedis 208 202
Bacillales Family XII. Incertae Sedis 3 7
Bacillales incertae sedis 212 176
Bacillus amyloliquefaciens UMAF6639 1
Bacillus atrophaeus UCMB-5137 1
Bacillus cereus AH676 1
Bacillus cereus ATCC 4342 1
Bacillus cereus F 1
Bacillus cereus F65185 1
Bacillus cereus m1293 1
Bacillus cereus Rock3-44 1
Bacillus cereus Rock4-18 1
Bacillus cereus Rock4-2 1
Bacillus jeotgali 1
Bacillus megaterium NCT-2 1
Bacillus megaterium Q3 1
Bacillus simplex NBRC 15720 = DSM 1321 1
Bacillus thuringiensis LM1212 1
Bacillus thuringiensis serovar andalousiensis 1
Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 1
Bacillus thuringiensis serovar huazhongensis 1
Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 1
Bacteria candidate phyla 170
bacterium 84634 5
Bacteroides acidifaciens JCM 10556 4
Bacteroides caccae CL03T12C61 3
Bacteroides cellulosilyticus CL02T12C19 2
Bacteroides chinchillae JCM 16497 3
Bacteroides clarus DSM 22519 1
Bacteroides dorei 5_1_36/D4 1
Bacteroides faecis JCM 16478 3
Bacteroides fluxus DSM 22534 2
Bacteroides fragilis str. 3397 T10 2
Bacteroides fragilis str. 3976T8 1
Bacteroides intestinalis 341 1 2
Bacteroides oleiciplenus DSM 22535 2
Bacteroides ovatus 3_8_47FAA 1
Bacteroides ovatus CL02T12C04 1 1
Bacteroides ovatus CL03T12C18 1
Bacteroides rodentium JCM 16496 3
Bacteroides salyersiae CL02T12C01 1
Bacteroides sartorii A-C2-0 1
Bacteroides sp. AP1 2
Bacteroides sp. CC31F 1
Bacteroides sp. JCM 17103 1
Bacteroides uniformis CL03T12C37 1
Bacteroides uniformis str. 3978 T3 i 1
Bacteroides vulgatus str. 3775 SL(B) 10 (iv) 1
Bacteroides vulgatus str. 3975 RP4 1
Bacteroides xylanisolvens CL03T12C04 1
Barnesiella intestinihominis str. YIT 11860 1 1
Bifidobacterium adolescentis JCM 15918 2
Bifidobacterium breve HPH0326 2
Bifidobacterium longum subsp. longum 2-2B 1
Bifidobacterium longum subsp. longum ATCC 55813 1
Bifidobacterium pseudocatenulatum IPLA36007 2
Bifidobacterium saeculare DSM 6531 3
Bilophila wadsworthia ATCC 49260 1
biota 858
Blattabacterium cuenoti BPAY 1
Blattabacterium cuenoti STAT 1
Blautia obeum ATCC 29174 5
Blautia producta ATCC 27340 1
Blautia schinkii DSM 10518 2
Blautia wexlerae DSM 19850 5
Borrelia coriaceae Co53 1
Borrelia crocidurae DOU 1
Borrelia hermsii YBT 1
Borreliella valaisiana VS116 1
Bovine herpesvirus type 2 (strain BHM-1) 1
Brevibacillus brevis X23 1
Brevibacillus laterosporus DSM 25 1
Brevibacterium massiliense 5401308 1
Brevibacterium mcbrellneri ATCC 49030 1
Buchnera aphidicola (Acyrthosiphon kondoi) 1
Buchnera aphidicola (Acyrthosiphon pisum) 2
Buchnera aphidicola (Cinara cedri) 1
Buchnera aphidicola (Cinara confinis) 1
Buchnera aphidicola (Cinara pseudotaxifoliae) 1
Buchnera aphidicola (Diuraphis noxia) 1
Buchnera aphidicola (Schizaphis graminum) 1
Buchnera aphidicola (Schlechtendalia chinensis) 1
Buchnera aphidicola (Tuberolachnus salignus) 1
Buchnera aphidicola (Uroleucon ambrosiae) 1
Bunyavirus la crosse 1
Burkholderiales Genera incertae sedis 22 4
Butyricicoccus pullicaecorum 1.2 3
Butyricimonas virosa DSM 23226 1
Calditrichae 56
Calothrix brevissima NIES-22 1
Calothrix parasitica NIES-267 1
Campylobacter sputorum biovar sputorum 1
Campylobacter sputorum bv. sputorum RM3237 1
Candidatus Uzinura 1
Canine adenovirus 2 1
Capnocytophaga sp. ChDC OS43 1
Catenibacterium mitsuokai DSM 15897 1
Catonella morbi ATCC 51271 1
CCUG 38732 2
Chlamydia/Chlamydophila group 1
Chlamydiae/Verrucomicrobia group 336
Chlorobium/Pelodictyon group 1
Chondrococcus 2
Chromobacterium group 4
Chromophyta 2
Clostridioides difficile F501 3
Clostridioides difficile M120 1
Clostridioides difficile P28 2
Clostridioides difficile QCD-37x79 1
Clostridioides difficile QCD-63q42 1
Clostridioides difficile QCD-76w55 1
Clostridium beijerinckii NRRL B-598 1
Clostridium botulinum B 1 4
Clostridium botulinum CDC_1436 1
Clostridium botulinum F 1
Clostridium celatum DSM 1785 1
Clostridium glycolicum ATCC 14880 1
Clostridium hathewayi 12489931 1
Clostridium hathewayi DSM 13479 4
Clostridium nexile ATCC 27757 5
Clostridium orbiscindens 1_3_50AFAA 4
Clostridium paraputrificum AGR2156 2
Clostridium perfringens F262 1
Clostridium ramosum DSM 1402 2
Clostridium sp. DL-VIII 2
Collinsella intestinalis DSM 13280 2
Collinsella sp. YIT 12063 2
Collinsella stercoris DSM 13279 2
core eudicots 21
Coriobacteriaceae bacterium B7 2
Coriobacteriaceae bacterium JC110 4 2
Coriobacteriaceae bacterium phI 1
Corynebacterium accolens ATCC 49725 1
Corynebacterium durum F0235 2
Cyanobacteria/Melainabacteria group 17
Dactylococcopsis 1
Desulfobacula toluolica 1
Desulfosporosinus youngiae DSM 17734 1
Dethiobacter alkaliphilus AHT 1 1
Detolaasinbacter 1
Dialister sp. YIT 11850 3
Dickeya paradisiaca NCPPB 2511 1
Dickeya zeae MK19 1
dicots 21
Dolichospermum compactum NIES-806 1
Dorea formicigenerans ATCC 27755 5
Dorea longicatena AGR2136 2
DSM 22248 1
Eggerthella lenta 1_1_60AFAA 1
Embryophyta 21
Empedobacter brevis NBRC 14943 = ATCC 43319 1
Endozoicomonas montiporae CL-33 1
Enterobacter asburiae LF7a 1
Enterococcus avium ATCC 14025 1
Enterococcus faecalis EnGen0285 1
Enterococcus faecium E4453 2
Enterorhabdus mucosicola DSM 19490 2
environmental samples 1 1
Erysipelotrichaceae bacterium GAM147 2
Escherichia coli HVH 175 (4-3405184) 1
Escherichia coli O15:H11 1
Escherichia coli O157 1
Escherichia coli O55:H7 1
Escherichia coli STEC_DG131-3 1
euasterids I 21
Eubacterium brachy ATCC 33089 1
Eubacterium cylindroides ATCC 27803 2
Eubacterium limosum KIST612 1
Eubacterium plautii ATCC 29863 1
Eubacterium ramulus ATCC 29099 5
Euphyllophyta 21
Eutheria 1
Faecalicoccus pleomorphus ATCC 29734 1
FCB group 486
Flavisolibacter sp. 17J28-1 2
Fluoribacter dumoffii NY 23 1
Formosa agariphila KMM 3901 1
Fremyella diplosiphon NIES-3275 2
Fungi/Metazoa group 2
Fusobacterium hwasookii ChDC F206 1
Fusobacterium nucleatum subsp. animalis 21_1A 1
Gemella sanguinis M325 1
Geminocystis herdmanii PCC 6308 1
Granulicatella adiacens ATCC 49175 1
H11N8 subtype 1
Haemophilus haemolyticus M19107 1
Haemophilus influenzae PittAA 1
Haemophilus parahaemolyticus G321 1
Haemophilus paraphrohaemolyticus HK411 1
Haemophilus pittmaniae CCUG 48703 1
Haloplasma contractile SSD-17B 1
Herpes simplex virus (type 1 / strain A44) 1
HIV-1 M:CRF02 233Hald 1
Hoeflea phototrophica DFL-43 1
Holdemania filiformis DSM 12042 4
Holdemania massiliensis AP2 1
Human papillomavirus unidentified type (RTRX1) 1
IFM 1018 2
Igbo Ora virus 1
Immundisolibacterales 2
Influenza A virus (A/Bangkok(H3N2)) 1
Influenza A virus (A/China/C1-8/2002(H3N2)) 1
Influenza A virus (A/duck/Hunan/344/2006(H5N1)) 1
Influenza A virus (A/northern shoveler/Alaska/17/2007(H3N8)) 1
Influenza A virus (A/pigeon/Rostov-on-Don/6/07(H5N1)) 1
Influenza A virus (A/Shiga/2/91(H3N2)) 1
Influenza B virus (B/New York/02/2007) 1
Influenza B virus (B/Oregon/01/2007) 1
Influenza B virus (B/Pennsylvania/06/2007) 1
Jonquetella anthropi DSM 22815 1
Klebsiella oxytoca G54 1
Klebsiella quasipneumoniae subsp. similipneumoniae MGH 44 1
Klebsiella variicola MGH 80 1
Komagataeibacter hansenii ATCC 23769 1
Kosakonia radicincitans DSM 16656 1
Labrenzia alexandrii DFL-11 1
Lachnospiraceae bacterium oral taxon 082 str. F0431 1
Lactobacillales incertae sedis 52
Lactobacillus amylovorus DSM 20531 1
Lactobacillus casei subsp. casei ATCC 393 1
Lactobacillus gasseri 202-4 1
Lactobacillus gasseri DSM 14869 1
Lactobacillus salivarius str. Ren 1
Leadbetterella 9 1
Leptospira biflexa serovar Patoc 1
Leptospira interrogans serovar Copenhageni/Icterohaemorrhagiae 1
Leptospira interrogans serovar Linhai 1
Leptospira interrogans serovar Manilae 1
lice endosymbionts 1
Listeria monocytogenes FSL J1-208 1
Mastadenovirus 1 1
mealybug secondary endosymbionts 1
Megamonas funiformis YIT 11815 1
Megasphaera elsdenii 14-14 1
Mesangiospermae 21
Mesorhizobium ciceri biovar biserrulae 1
Mesorhizobium ciceri ca181 1
Methanobrevibacter smithii DSM 2375 1
methanotroph E10 1
Methylacidiphilum fumariolicum SolV 1
Microcystis aeruginosa PCC 7806 1
Microcystis aeruginosa PCC 7806SL 1
Mitsuokella jalaludinii DSM 13811 1
Mobiluncus/Falcivibrio group 51
Moorella group 4
Mycoplasma gallisepticum str. R 1
Mycoplasma mycoides subsp. capri LC 1
Myroides odoratus DSM 2801 1
Myxococcus fulvus 124B02 1
Mzabimycetaceae 1
Negativicoccus succinicivorans DORA_17_25 2
Neorhizobium galegae bv. officinalis 1
NIES-204 1
Nitrosospira briensis C-128 1
Nodularia spumigena CCY9414 1
Nonlabens 7 2
Nonlabens marinus S1-08 1
Norovirus noodle salad/Stuttgart21334/2006/DEU 1
Nostoc carneum NIES-2107 1
Nostoc linckia NIES-25 1
Oceanobacillus kimchii X50 1
Odoribacter laneus JCM 16069 2
Oenococcus kitaharae DSM 17330 1
oligotrophic marine Gammaproteobacteria group 1
OM182 clade 1
Oscillibacter ruminantium GH1 2
Paenibacillus durus ATCC 35681 1
Parabacteroides distasonis CL03T12C09 1
Parabacteroides distasonis str. 3776 D15 iv 1
Parabacteroides distasonis str. 3999B T(B) 4 1
Parabacteroides distasonis str. 3999B T(B) 6 1
Parabacteroides johnsonii CL02T12C29 1
Parabacteroides merdae CL03T12C32 1
Parabasalia 1
Paraprevotella clara str. YIT 11840 2
Pasteurella multocida subsp. multocida P1062 1
Pediococcus acidilactici 7_4 1
Peptoniphilus lacrimalis DNF00528 1
Peptostreptococcus anaerobius DSM 2949 1
Plasmodium cynomolgi (strain Ceylon) 1
Plasmodium cynomolgi (strain London) 1
Plasmodium falciparum (isolate mad20 / papua new guinea) 1
Plasmodium falciparum (isolate TAK 9) 1
Porphyromonas somerae DSM 23386 2
Porphyromonas uenonis DSM 23387 2
Prevotella bivia DNF00650 1
Prevotella scopos JCM 17725 2
Prevotella sp. 4401737 2
Prevotella stercorea DSM 18206 2
primary endosymbiont of Heteropsylla cubana 1
Providencia sneebia DSM 19967 1
Pseudomonas amygdali pv. tabaci 1
Pseudomonas fluorescens NCIMB 11764 1
Pseudomonas fluorescens Q2-87 1
Pseudomonas fluorescens R124 1
Pseudomonas fluorescens WH6 1
Pseudomonas moraviensis R28-S 1
Pseudomonas putida S13.1.2 1
Pseudomonas stutzeri subgroup 2
Pseudomonas syringae group pathovars incertae sedis 1
Pseudomonas syringae pv. actinidiae 1
Pseudomonas syringae pv. syringae SM 1
Rhizobium etli 8C-3 1
Rhizobium leguminosarum (BIOVAR PHASEOLI) 1
Rhizobium leguminosarum bv. viciae