| Caldicellulosiruptor| Caldicellulosiruptor Rainey et al. 1995 emend. Onyenwoke et al. 2006
Biotechnological applications: Caldicellulosiruptor species have attracted significant attention due to their potential applications in biotechnology, particularly in the bioconversion of lignocellulosic biomass into biofuels and other valuable products. Their robust cellulolytic and hemicellulolytic capabilities, coupled with their ability to grow at high temperatures (thermophiles), make them promising candidates for bioenergy production processes such as consolidated bioprocessing (CBP). CBP involves the simultaneous saccharification of biomass and fermentation of released sugars into biofuels using a single microorganism, thereby simplifying the production process and reducing costs.
Cellulose degradation: Caldicellulosiruptor species produce a range of cellulolytic enzymes, including cellulases, hemicellulases, and ligninases, which enable them to efficiently degrade plant biomass into fermentable sugars. These enzymes play a crucial role in the breakdown of cellulose and hemicellulose into smaller oligosaccharides and monosaccharides, which can then be metabolized by the bacteria for energy and growth. Understanding the cellulolytic machinery of Caldicellulosiruptor species may inform efforts to develop more efficient enzymatic cocktails for biomass conversion in industrial processes.
Thermophilic environments: Caldicellulosiruptor species are adapted to thrive in high-temperature environments, such as hot springs, geothermal vents, and compost piles, where they play important roles in the degradation of plant biomass. Their ability to withstand extreme temperatures and efficiently depolymerize complex carbohydrates under such conditions makes them valuable for industrial applications, especially in processes requiring elevated temperatures.
Bioremediation: Some Caldicellulosiruptor species have been explored for their potential in bioremediation, particularly in the degradation of lignocellulosic waste materials, such as agricultural residues, forestry by-products, and industrial waste streams. By converting recalcitrant biomass into simpler organic compounds, these bacteria can contribute to the remediation of contaminated sites and the reduction of environmental pollution.
Ecological roles: While Caldicellulosiruptor species are not typically associated with human health, they play important ecological roles in natural ecosystems, particularly in the degradation and recycling of plant biomass. By participating in the carbon cycle and nutrient cycling processes, these bacteria contribute to ecosystem functioning and stability.
A lot more information is available when you are logged in and raise the display level
Other Sources for more information:
Statistics | NCBI | Data Punk | End Products Produced |
Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.
Lab | Frequency | UD-Low | UD-High | KM Low | KM High | Lab Low | Lab High | Mean | Median | Standard Deviation | Box Plot Low | Box Plot High | KM Percentile Low | KM Percentile High |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Other Labs | 1.72 | 13 | 3489 | 0 | 1429 | 274.5 | 102 | 589 | 0 | 498 | 0 %ile | 100 %ile | ||
biomesight | 86.55 | 0 | 320 | 50 | 460 | 0 | 1808 | 334.3 | 160 | 751.7 | 0 | 500 | 9.9 %ile | 90.9 %ile |
thorne | 100 | 7 | 61 | 0 | 48 | 22.6 | 19 | 12.7 | 9 | 39 | 0 %ile | 100 %ile | ||
thryve | 7.94 | 0 | 0 | 7 | 324 | 0 | 106 | 30 | 21 | 38.5 | 7 | 37 | 0 %ile | 100 %ile |
Source of Ranges | Low Boundary | High Boundary | Low Boundary %age | High Boundary %age |
---|---|---|---|---|
Thorne (20/80%ile) | 6.05 | 16.61 | 0.0006 | 0.0017 |
Lab | Frequency Seen | Average | Standard Deviation | Sample Count | Lab Samples |
---|---|---|---|---|---|
BiomeSight | 93.049 % | 0.033 % | 0.076 % | 2664.0 | 2863 |
BiomeSightRdp | 81.25 % | 0.044 % | 0.076 % | 26.0 | 32 |
CerbaLab | 66.667 % | 0.002 % | 0.001 % | 2.0 | 3 |
custom | 6.78 % | 0.006 % | 0.004 % | 4.0 | 59 |
es-xenogene | 17.241 % | 0.024 % | 0.012 % | 5.0 | 29 |
Medivere | 85.714 % | 0.01 % | 0.017 % | 6.0 | 7 |
SequentiaBiotech | 2.778 % | 0.01 % | % | 1.0 | 36 |
Thorne | 81.818 % | 0.001 % | 0.001 % | 72.0 | 88 |
Thryve | 7.809 % | 0.006 % | 0.027 % | 108.0 | 1383 |
Click on Impact for information if high or low levels are causing the impact
Magnitude | Impact | Symptom |
---|---|---|
1 | Increases | General: Fatigue |
1 | Increases | Post-exertional malaise: Inappropriate loss of physical and mental stamina, |
1 | Increases | Sleep: Unrefreshed sleep |
1 | Increases | Neurological-Sleep: Chaotic diurnal sleep rhythms (Erratic Sleep) |
1 | Reduces | General: Myalgia (pain) |
1 | Increases | General: Headaches |
1 | Reduces | Neurological: Confusion |
1 | Reduces | Neurological: Disorientation |
1 | Reduces | Neurological: Difficulty processing information (Understanding) |
1 | Increases | Neurological-Vision: photophobia (Light Sensitivity) |
1 | Reduces | Neurological: emotional overload |
1 | Increases | Autonomic Manifestations: Postural orthostatic tachycardia syndrome (POTS) |
1 | Reduces | Autonomic Manifestations: light-headedness |
1 | Reduces | Autonomic Manifestations: nausea |
1 | Reduces | Autonomic Manifestations: bladder dysfunction |
1 | Reduces | Autonomic Manifestations: palpitations |
1 | Increases | Autonomic Manifestations: exertional dyspnea |
1 | Increases | Post-exertional malaise: Rapid muscular fatigability, |
1 | Increases | Post-exertional malaise: Rapid cognitive fatigability, |
1 | Increases | Post-exertional malaise: General |
1 | Increases | Neuroendocrine Manifestations: sweating episodes |
1 | Increases | Neuroendocrine Manifestations: cold extremities |
1 | Increases | Neuroendocrine Manifestations: marked weight change |
1 | Increases | Neuroendocrine Manifestations: abnormal appetite |
1 | Increases | Neuroendocrine Manifestations: loss of adaptability |
1 | Increases | Neuroendocrine Manifestations: worsening of symptoms with stress. |
1 | Increases | Immune Manifestations: tender lymph nodes |
1 | Increases | Immune Manifestations: recurrent flu-like symptoms |
1 | Increases | Immune Manifestations: new food sensitivities |
1 | Increases | Onset: Sudden |
1 | Reduces | Infection: Lyme |
1 | Reduces | Infection: Mycoplasma |
1 | Reduces | Comorbid: Fibromyalgia |
1 | Reduces | Comorbid: Hypothyroidism |
1 | Increases | Neurological: Neuropathy |
1 | Increases | Neurological: Myoclonic jerks or seizures |
1 | Reduces | Neuroendocrine Manifestations: Excessive adrenaline |
1 | Reduces | Neurological: Slowed speech |
1 | Reduces | Immune Manifestations: Abdominal Pain |
1 | Reduces | Immune Manifestations: Diarrhea |
1 | Increases | Neuroendocrine Manifestations: Air Hunger |
1 | Increases | Neurological: Joint hypermobility |
1 | Increases | Onset: less than 02 years since onset |
1 | Reduces | Onset: less than 04 years since onset |
1 | Increases | Onset: less than 16 years since onset |
1 | Reduces | Onset: less than 32 years since onset |
1 | Increases | Neurological-Sleep: Night Sweats |
1 | Increases | Neurological-Sleep: Sleep Apnea |
1 | Increases | Neurological: High degree of Empathy before onset |
1 | Increases | Neurological: Seasonal Affective Disorder (SAD) |
1 | Increases | Neuroendocrine Manifestations: Dry Eye (Sicca or Sjogren Syndrome) |
1 | Reduces | Comorbid-Mouth: Dry Mouth |
1 | Reduces | Infection: Parasite - Other |
1 | Reduces | Comorbid: Mold Sensitivity / Exposure |
1 | Increases | Neurological-Vision: Blurred Vision |
1 | Increases | Immune Manifestations: Thick blood / Hypercoagulation |
1 | Increases | Comorbid-Mouth: Gingivits / Gum Disease |
1 | Increases | Comorbid-Mouth: TMJ / Dysfunction of the temporomandibular joint syndrome |
1 | Increases | Comorbid-Mouth: Bruxism - Jaw cleanching / Teeth grinding |
1 | Reduces | Autonomic Manifestations: Cortisol disorders or irregularity |
1 | Reduces | Comorbid: Small intestinal bacterial overgrowth (SIBO) |
1 | Reduces | Comorbid: Inflammatory bowel disease |
1 | Increases | Comorbid: Restless Leg |
1 | Reduces | Asymptomatic: No Health Issues |
1 | Increases | Comorbid: Histamine or Mast Cell issues |
1 | Increases | Neuroendocrine Manifestations: Rapid muscular fatiguability |
1 | Reduces | Gender: Male |
1 | Increases | Gender: Female |
1 | Reduces | Age: 0-10 |
1 | Reduces | Age: 10-20 |
1 | Reduces | Age: 20-30 |
1 | Reduces | Age: 30-40 |
1 | Increases | Sleep: Problems staying asleep |
1 | Reduces | Pain: Pain or aching in muscles |
1 | Increases | Pain: Eye pain |
1 | Increases | Pain: Aching of the eyes or behind the eyes |
1 | Increases | Pain: Myofascial pain |
1 | Increases | Neuroendocrine: Lost or gained weight without trying |
1 | Increases | Neuroendocrine: Cold limbs (e.g. arms, legs hands) |
1 | Reduces | Neuroendocrine: Feeling like you have a high temperature |
1 | Reduces | Neuroendocrine: Temperature fluctuations throughout the day |
1 | Increases | Immune: Flu-like symptoms |
1 | Increases | Other: Sensitivity to mold |
1 | Increases | Other: Sensitivity to vibrations |
1 | Reduces | Autonomic: Nausea |
1 | Reduces | Autonomic: Dizziness or fainting |
1 | Increases | Autonomic: Heart rate increase after standing |
1 | Reduces | Neurocognitive: Difficulty expressing thoughts |
1 | Increases | Neurocognitive: Difficulty understanding things |
1 | Reduces | Neurocognitive: Unable to focus vision and/or attention |
1 | Increases | Neurocognitive: Absent-mindedness or forgetfulness |
1 | Reduces | Neurocognitive: Feeling disoriented |
1 | Increases | Post-exertional malaise: Post-exertional malaise |
1 | Increases | Post-exertional malaise: Physically tired after minimum exercise |
1 | Increases | Post-exertional malaise: Physically drained or sick after mild activity |
1 | Increases | Post-exertional malaise: Muscle fatigue after mild physical activity |
1 | Increases | Post-exertional malaise: Worsening of symptoms after mild physical activity |
1 | Increases | Post-exertional malaise: Worsening of symptoms after mild mental activity |
1 | Increases | Post-exertional malaise: Difficulty reading after mild physical or mental activity |
1 | Reduces | Official Diagnosis: Autism |
1 | Increases | Official Diagnosis: Attention deficit hyperactivity disorder (ADHD) |
1 | Increases | Official Diagnosis: Autoimmune Disease |
1 | Increases | Official Diagnosis: Chronic Fatigue Syndrome (CFS/ME) |
1 | Increases | Official Diagnosis: Depression |
1 | Reduces | Joint: Tenderness |
1 | Increases | Comorbid-Mouth: Mouth Sores |
1 | Increases | Neurocognitive: Brain Fog |
1 | Increases | Neuroendocrine Manifestations: Painful menstrual periods |
1 | Increases | Official Diagnosis: Fibromyalgia |
1 | Reduces | Comorbid-Mouth: Ulcers (mouth) |
1 | Reduces | Immune Manifestations: Inflammation (General) |
1 | Increases | Comorbid: Carbohydrate intolerance |
1 | Increases | Immune: Chronic Sinusitis |
1 | Increases | Autonomic: Ocassional Tachycardia (Rapid heart beat) |
1 | Reduces | Blood Type: A Positive |
1 | Increases | Comorbid: Salicylate sensitive |
1 | Reduces | General: Heavy feeling in arms and legs |
1 | Reduces | Comorbid: Sugars cause sleep or cognitive issues |
1 | Reduces | Comorbid: Mood Swings |
1 | Reduces | Comorbid: Constipation and Explosions (not diarrohea) |
1 | Increases | Comorbid: Sleep Apnea Diagnosis |
1 | Increases | Official Diagnosis: Gastroesophageal reflux disease (GERD) |
1 | Reduces | DePaul University Fatigue Questionnaire : Racing heart |
1 | Increases | DePaul University Fatigue Questionnaire : Shortness of breath |
1 | Reduces | DePaul University Fatigue Questionnaire : Upset stomach |
1 | Reduces | DePaul University Fatigue Questionnaire : Abdomen pain |
1 | Reduces | DePaul University Fatigue Questionnaire : Weight change |
1 | Reduces | DePaul University Fatigue Questionnaire : Dizziness |
1 | Increases | DePaul University Fatigue Questionnaire : Night sweats |
1 | Reduces | DePaul University Fatigue Questionnaire : Chilled or shivery |
1 | Increases | DePaul University Fatigue Questionnaire : Hot or Cold spells |
1 | Reduces | DePaul University Fatigue Questionnaire : Feeling like you have a temperature |
1 | Increases | DePaul University Fatigue Questionnaire : Temperature lower than normal |
1 | Reduces | DePaul University Fatigue Questionnaire : Tingling feeling |
1 | Reduces | DePaul University Fatigue Questionnaire : Blurred Vision |
1 | Reduces | DePaul University Fatigue Questionnaire : Abnormal sensitivity to light |
1 | Increases | DePaul University Fatigue Questionnaire : Eye pain |
1 | Reduces | DePaul University Fatigue Questionnaire : Rash |
1 | Reduces | DePaul University Fatigue Questionnaire : Muscle weakness |
1 | Reduces | DePaul University Fatigue Questionnaire : Feel unsteady on feet |
1 | Reduces | DePaul University Fatigue Questionnaire : Difficulty falling asleep |
1 | Reduces | DePaul University Fatigue Questionnaire : Confusion/disorientation |
1 | Reduces | DePaul University Fatigue Questionnaire : Difficulty reasoning things out |
1 | Reduces | DePaul University Fatigue Questionnaire : Forgetting what you are trying to say |
1 | Reduces | DePaul University Fatigue Questionnaire : Difficulty following things |
1 | Reduces | DePaul University Fatigue Questionnaire : Difficulty comprehending Information |
1 | Reduces | DePaul University Fatigue Questionnaire : Frequently loose train of thought |
1 | Reduces | DePaul University Fatigue Questionnaire : Frequently get words or numbers in the wrong order |
1 | Reduces | DePaul University Fatigue Questionnaire : New trouble with math |
1 | Increases | DePaul University Fatigue Questionnaire : Concern with driving |
1 | Reduces | DePaul University Fatigue Questionnaire : Easily irritated |
1 | Reduces | DePaul University Fatigue Questionnaire : Depression |
1 | Reduces | DePaul University Fatigue Questionnaire : Mood swings |
1 | Increases | DePaul University Fatigue Questionnaire : Sore Throat |
1 | Reduces | DePaul University Fatigue Questionnaire : Muscle Pain (i.e., sensations of pain or aching in your muscles. This does not include weakness or pain in other areas such as joints) |
1 | Reduces | DePaul University Fatigue Questionnaire : Pain in Multiple Joints without Swelling or Redness |
1 | Reduces | DePaul University Fatigue Questionnaire : Nausea |
1 | Reduces | DePaul University Fatigue Questionnaire : Headaches |
1 | Reduces | Condition: Acne |
1 | Increases | Condition: Non-Celiac Gluten Sensitivity |
1 | Increases | Condition: ME/CFS without IBS |
1 | Increases | Physical: Tonsils removed |
1 | Increases | Physical: Amalgam fillings |
1 | Reduces | Physical: Eastern European |
1 | Increases | Physical: Long term (chronic) stress |
1 | Increases | Physical: Breastfed |
1 | Increases | Physical: Pets |
1 | Increases | Physical: Good Air Quality |
1 | Reduces | Physical: Organic Diet |
1 | Reduces | Physical: Work-Sitting |
1 | Increases | Physical: Steps Per Day < 2000 |
1 | Increases | Physical: Steps Per Day 2000-4000 |
1 | Increases | Physical: Steps Per Day 4000-8000 |
1 | Reduces | Physical: Steps Per Day 8000-16000 |
1 | Increases | Official Diagnosis: Hypercholesterolemia (High Cholesterol) |
1 | Reduces | Official Diagnosis: COVID19 (Long Hauler) |
1 | Increases | Neurocognitive: Aphantasia ( inability to visualize mental images) |
1 | Increases | Official Diagnosis: COVID19 (Fully Recovered) |
1 | Reduces | General: Anhedonia (inability to feel pleasure) |
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