SELECT TOP (1000) [Source] ,[Taxon] ,[LowValue] ,[HighValue] ,[LowPCile] ,[HighPCile] FROM [DB_A5D9F7_Lassesen].[dbo].[JasonH]

Caldicellulosiruptor Details: NCBI 44000, gram-negative or unknown [genus]

| Caldicellulosiruptor| Caldicellulosiruptor Rainey et al. 1995 emend. Onyenwoke et al. 2006

  1. Biotechnological applications: Caldicellulosiruptor species have attracted significant attention due to their potential applications in biotechnology, particularly in the bioconversion of lignocellulosic biomass into biofuels and other valuable products. Their robust cellulolytic and hemicellulolytic capabilities, coupled with their ability to grow at high temperatures (thermophiles), make them promising candidates for bioenergy production processes such as consolidated bioprocessing (CBP). CBP involves the simultaneous saccharification of biomass and fermentation of released sugars into biofuels using a single microorganism, thereby simplifying the production process and reducing costs.

  2. Cellulose degradation: Caldicellulosiruptor species produce a range of cellulolytic enzymes, including cellulases, hemicellulases, and ligninases, which enable them to efficiently degrade plant biomass into fermentable sugars. These enzymes play a crucial role in the breakdown of cellulose and hemicellulose into smaller oligosaccharides and monosaccharides, which can then be metabolized by the bacteria for energy and growth. Understanding the cellulolytic machinery of Caldicellulosiruptor species may inform efforts to develop more efficient enzymatic cocktails for biomass conversion in industrial processes.

  3. Thermophilic environments: Caldicellulosiruptor species are adapted to thrive in high-temperature environments, such as hot springs, geothermal vents, and compost piles, where they play important roles in the degradation of plant biomass. Their ability to withstand extreme temperatures and efficiently depolymerize complex carbohydrates under such conditions makes them valuable for industrial applications, especially in processes requiring elevated temperatures.

  4. Bioremediation: Some Caldicellulosiruptor species have been explored for their potential in bioremediation, particularly in the degradation of lignocellulosic waste materials, such as agricultural residues, forestry by-products, and industrial waste streams. By converting recalcitrant biomass into simpler organic compounds, these bacteria can contribute to the remediation of contaminated sites and the reduction of environmental pollution.

  5. Ecological roles: While Caldicellulosiruptor species are not typically associated with human health, they play important ecological roles in natural ecosystems, particularly in the degradation and recycling of plant biomass. By participating in the carbon cycle and nutrient cycling processes, these bacteria contribute to ecosystem functioning and stability.

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More Information
Statistics NCBI Data Punk End Products Produced

Lab Reporting

Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.

Desired Levels Suggestions for Caldicellulosiruptor

These are values that are computed from lab specific samples (Patent Pending)
LabFrequencyUD-LowUD-HighKM LowKM HighLab LowLab HighMean MedianStandard DeviationBox Plot LowBox Plot High KM Percentile Low KM Percentile High
Other Labs 1.72 13 3489 0 1429 274.5 102 589 0 498 0 %ile 100 %ile
biomesight 86.55 0 320 50 460 0 1808 334.3 160 751.7 0 500 9.9 %ile 90.9 %ile
thorne 100 7 61 0 48 22.6 19 12.7 9 39 0 %ile 100 %ile
thryve 7.94 0 0 7 324 0 106 30 21 38.5 7 37 0 %ile 100 %ile

External Reference Ranges for Caldicellulosiruptor

Caldicellulosiruptor (NCBI 44000) per million
Source of Ranges Low Boundary High Boundary Low Boundary %age High Boundary %age
Thorne (20/80%ile) 6.05 16.61 0.0006 0.0017
Statistic by Lab Source for Caldicellulosiruptor
These desired values are reported from the lab reports
Lab Frequency Seen Average Standard Deviation Sample Count Lab Samples
BiomeSight 93.049 %   0.033 %  0.076 % 2664.0 2863
BiomeSightRdp 81.25 %   0.044 %  0.076 % 26.0 32
CerbaLab 66.667 %   0.002 %  0.001 % 2.0 3
custom 6.78 %   0.006 %  0.004 % 4.0 59
es-xenogene 17.241 %   0.024 %  0.012 % 5.0 29
Medivere 85.714 %   0.01 %  0.017 % 6.0 7
SequentiaBiotech 2.778 %   0.01 %  % 1.0 36
Thorne 81.818 %   0.001 %  0.001 % 72.0 88
Thryve 7.809 %   0.006 %  0.027 % 108.0 1383

Symptoms Associated with Caldicellulosiruptor From Citizen Science Studies

Click on Impact for information if high or low levels are causing the impact

MagnitudeImpactSymptom
1 Increases General: Fatigue
1 Increases Post-exertional malaise: Inappropriate loss of physical and mental stamina,
1 Increases Sleep: Unrefreshed sleep
1 Increases Neurological-Sleep: Chaotic diurnal sleep rhythms (Erratic Sleep)
1 Reduces General: Myalgia (pain)
1 Increases General: Headaches
1 Reduces Neurological: Confusion
1 Reduces Neurological: Disorientation
1 Reduces Neurological: Difficulty processing information (Understanding)
1 Increases Neurological-Vision: photophobia (Light Sensitivity)
1 Reduces Neurological: emotional overload
1 Increases Autonomic Manifestations: Postural orthostatic tachycardia syndrome (POTS)
1 Reduces Autonomic Manifestations: light-headedness
1 Reduces Autonomic Manifestations: nausea
1 Reduces Autonomic Manifestations: bladder dysfunction
1 Reduces Autonomic Manifestations: palpitations
1 Increases Autonomic Manifestations: exertional dyspnea
1 Increases Post-exertional malaise: Rapid muscular fatigability,
1 Increases Post-exertional malaise: Rapid cognitive fatigability,
1 Increases Post-exertional malaise: General
1 Increases Neuroendocrine Manifestations: sweating episodes
1 Increases Neuroendocrine Manifestations: cold extremities
1 Increases Neuroendocrine Manifestations: marked weight change
1 Increases Neuroendocrine Manifestations: abnormal appetite
1 Increases Neuroendocrine Manifestations: loss of adaptability
1 Increases Neuroendocrine Manifestations: worsening of symptoms with stress.
1 Increases Immune Manifestations: tender lymph nodes
1 Increases Immune Manifestations: recurrent flu-like symptoms
1 Increases Immune Manifestations: new food sensitivities
1 Increases Onset: Sudden
1 Reduces Infection: Lyme
1 Reduces Infection: Mycoplasma
1 Reduces Comorbid: Fibromyalgia
1 Reduces Comorbid: Hypothyroidism
1 Increases Neurological: Neuropathy
1 Increases Neurological: Myoclonic jerks or seizures
1 Reduces Neuroendocrine Manifestations: Excessive adrenaline
1 Reduces Neurological: Slowed speech
1 Reduces Immune Manifestations: Abdominal Pain
1 Reduces Immune Manifestations: Diarrhea
1 Increases Neuroendocrine Manifestations: Air Hunger
1 Increases Neurological: Joint hypermobility
1 Increases Onset: less than 02 years since onset
1 Reduces Onset: less than 04 years since onset
1 Increases Onset: less than 16 years since onset
1 Reduces Onset: less than 32 years since onset
1 Increases Neurological-Sleep: Night Sweats
1 Increases Neurological-Sleep: Sleep Apnea
1 Increases Neurological: High degree of Empathy before onset
1 Increases Neurological: Seasonal Affective Disorder (SAD)
1 Increases Neuroendocrine Manifestations: Dry Eye (Sicca or Sjogren Syndrome)
1 Reduces Comorbid-Mouth: Dry Mouth
1 Reduces Infection: Parasite - Other
1 Reduces Comorbid: Mold Sensitivity / Exposure
1 Increases Neurological-Vision: Blurred Vision
1 Increases Immune Manifestations: Thick blood / Hypercoagulation
1 Increases Comorbid-Mouth: Gingivits / Gum Disease
1 Increases Comorbid-Mouth: TMJ / Dysfunction of the temporomandibular joint syndrome
1 Increases Comorbid-Mouth: Bruxism - Jaw cleanching / Teeth grinding
1 Reduces Autonomic Manifestations: Cortisol disorders or irregularity
1 Reduces Comorbid: Small intestinal bacterial overgrowth (SIBO)
1 Reduces Comorbid: Inflammatory bowel disease
1 Increases Comorbid: Restless Leg
1 Reduces Asymptomatic: No Health Issues
1 Increases Comorbid: Histamine or Mast Cell issues
1 Increases Neuroendocrine Manifestations: Rapid muscular fatiguability
1 Reduces Gender: Male
1 Increases Gender: Female
1 Reduces Age: 0-10
1 Reduces Age: 10-20
1 Reduces Age: 20-30
1 Reduces Age: 30-40
1 Increases Sleep: Problems staying asleep
1 Reduces Pain: Pain or aching in muscles
1 Increases Pain: Eye pain
1 Increases Pain: Aching of the eyes or behind the eyes
1 Increases Pain: Myofascial pain
1 Increases Neuroendocrine: Lost or gained weight without trying
1 Increases Neuroendocrine: Cold limbs (e.g. arms, legs hands)
1 Reduces Neuroendocrine: Feeling like you have a high temperature
1 Reduces Neuroendocrine: Temperature fluctuations throughout the day
1 Increases Immune: Flu-like symptoms
1 Increases Other: Sensitivity to mold
1 Increases Other: Sensitivity to vibrations
1 Reduces Autonomic: Nausea
1 Reduces Autonomic: Dizziness or fainting
1 Increases Autonomic: Heart rate increase after standing
1 Reduces Neurocognitive: Difficulty expressing thoughts
1 Increases Neurocognitive: Difficulty understanding things
1 Reduces Neurocognitive: Unable to focus vision and/or attention
1 Increases Neurocognitive: Absent-mindedness or forgetfulness
1 Reduces Neurocognitive: Feeling disoriented
1 Increases Post-exertional malaise: Post-exertional malaise
1 Increases Post-exertional malaise: Physically tired after minimum exercise
1 Increases Post-exertional malaise: Physically drained or sick after mild activity
1 Increases Post-exertional malaise: Muscle fatigue after mild physical activity
1 Increases Post-exertional malaise: Worsening of symptoms after mild physical activity
1 Increases Post-exertional malaise: Worsening of symptoms after mild mental activity
1 Increases Post-exertional malaise: Difficulty reading after mild physical or mental activity
1 Reduces Official Diagnosis: Autism
1 Increases Official Diagnosis: Attention deficit hyperactivity disorder (ADHD)
1 Increases Official Diagnosis: Autoimmune Disease
1 Increases Official Diagnosis: Chronic Fatigue Syndrome (CFS/ME)
1 Increases Official Diagnosis: Depression
1 Reduces Joint: Tenderness
1 Increases Comorbid-Mouth: Mouth Sores
1 Increases Neurocognitive: Brain Fog
1 Increases Neuroendocrine Manifestations: Painful menstrual periods
1 Increases Official Diagnosis: Fibromyalgia
1 Reduces Comorbid-Mouth: Ulcers (mouth)
1 Reduces Immune Manifestations: Inflammation (General)
1 Increases Comorbid: Carbohydrate intolerance
1 Increases Immune: Chronic Sinusitis
1 Increases Autonomic: Ocassional Tachycardia (Rapid heart beat)
1 Reduces Blood Type: A Positive
1 Increases Comorbid: Salicylate sensitive
1 Reduces General: Heavy feeling in arms and legs
1 Reduces Comorbid: Sugars cause sleep or cognitive issues
1 Reduces Comorbid: Mood Swings
1 Reduces Comorbid: Constipation and Explosions (not diarrohea)
1 Increases Comorbid: Sleep Apnea Diagnosis
1 Increases Official Diagnosis: Gastroesophageal reflux disease (GERD)
1 Reduces DePaul University Fatigue Questionnaire : Racing heart
1 Increases DePaul University Fatigue Questionnaire : Shortness of breath
1 Reduces DePaul University Fatigue Questionnaire : Upset stomach
1 Reduces DePaul University Fatigue Questionnaire : Abdomen pain
1 Reduces DePaul University Fatigue Questionnaire : Weight change
1 Reduces DePaul University Fatigue Questionnaire : Dizziness
1 Increases DePaul University Fatigue Questionnaire : Night sweats
1 Reduces DePaul University Fatigue Questionnaire : Chilled or shivery
1 Increases DePaul University Fatigue Questionnaire : Hot or Cold spells
1 Reduces DePaul University Fatigue Questionnaire : Feeling like you have a temperature
1 Increases DePaul University Fatigue Questionnaire : Temperature lower than normal
1 Reduces DePaul University Fatigue Questionnaire : Tingling feeling
1 Reduces DePaul University Fatigue Questionnaire : Blurred Vision
1 Reduces DePaul University Fatigue Questionnaire : Abnormal sensitivity to light
1 Increases DePaul University Fatigue Questionnaire : Eye pain
1 Reduces DePaul University Fatigue Questionnaire : Rash
1 Reduces DePaul University Fatigue Questionnaire : Muscle weakness
1 Reduces DePaul University Fatigue Questionnaire : Feel unsteady on feet
1 Reduces DePaul University Fatigue Questionnaire : Difficulty falling asleep
1 Reduces DePaul University Fatigue Questionnaire : Confusion/disorientation
1 Reduces DePaul University Fatigue Questionnaire : Difficulty reasoning things out
1 Reduces DePaul University Fatigue Questionnaire : Forgetting what you are trying to say
1 Reduces DePaul University Fatigue Questionnaire : Difficulty following things
1 Reduces DePaul University Fatigue Questionnaire : Difficulty comprehending Information
1 Reduces DePaul University Fatigue Questionnaire : Frequently loose train of thought
1 Reduces DePaul University Fatigue Questionnaire : Frequently get words or numbers in the wrong order
1 Reduces DePaul University Fatigue Questionnaire : New trouble with math
1 Increases DePaul University Fatigue Questionnaire : Concern with driving
1 Reduces DePaul University Fatigue Questionnaire : Easily irritated
1 Reduces DePaul University Fatigue Questionnaire : Depression
1 Reduces DePaul University Fatigue Questionnaire : Mood swings
1 Increases DePaul University Fatigue Questionnaire : Sore Throat
1 Reduces DePaul University Fatigue Questionnaire : Muscle Pain (i.e., sensations of pain or aching in your muscles. This does not include weakness or pain in other areas such as joints)
1 Reduces DePaul University Fatigue Questionnaire : Pain in Multiple Joints without Swelling or Redness
1 Reduces DePaul University Fatigue Questionnaire : Nausea
1 Reduces DePaul University Fatigue Questionnaire : Headaches
1 Reduces Condition: Acne
1 Increases Condition: Non-Celiac Gluten Sensitivity
1 Increases Condition: ME/CFS without IBS
1 Increases Physical: Tonsils removed
1 Increases Physical: Amalgam fillings
1 Reduces Physical: Eastern European
1 Increases Physical: Long term (chronic) stress
1 Increases Physical: Breastfed
1 Increases Physical: Pets
1 Increases Physical: Good Air Quality
1 Reduces Physical: Organic Diet
1 Reduces Physical: Work-Sitting
1 Increases Physical: Steps Per Day < 2000
1 Increases Physical: Steps Per Day 2000-4000
1 Increases Physical: Steps Per Day 4000-8000
1 Reduces Physical: Steps Per Day 8000-16000
1 Increases Official Diagnosis: Hypercholesterolemia (High Cholesterol)
1 Reduces Official Diagnosis: COVID19 (Long Hauler)
1 Increases Neurocognitive: Aphantasia ( inability to visualize mental images)
1 Increases Official Diagnosis: COVID19 (Fully Recovered)
1 Reduces General: Anhedonia (inability to feel pleasure)

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