We use a subjective scale and leave the reader to translate the lab reports appropriately. If the bacteria are identified as bad/pathogenic and you are low, then do not enter them.
Bacteria Reported Level Also Known as Comment
[Bacteroides] pectinophilus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| [Bacteroides] pectinophilus| ATCC 43243| Bacteroides pectinophilus| Bacteroides pectinophilus Jensen and Canale-Parola 1987
[Clostridium] methylpentosum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| [Clostridium] methylpentosum| ATCC 43829| Clostridium methylpentosum| Clostridium methylpentosum Himelbloom and Canale-Parola 1989| DSM 5476| strain R2
[Eubacterium] siraeum [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| [Eubacterium] siraeum| ATCC 29066| DSM 15702| DSM 3996| Eubacterium siraeum| Eubacterium siraeum Moore et al. 1976
[Ruminococcus] gnavus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| [Ruminococcus] gnavus| ATCC 29149| Ruminococcus gnavus| Ruminococcus gnavus Moore et al. 1976| VPI C7-9
Not Healthy Predictor
Acinetobacter junii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Acinetobacter genomosp. 5| Acinetobacter genomospecies 5| Acinetobacter grimontii| Acinetobacter grimontii Carr et al. 2003| Acinetobacter junii| Acinetobacter junii Bouvet and Grimont 1986| Acinetobacter sp. WR4| Acinetobacter sp. WR5| ATCC 17908| CCUG 50767 [[Acinetobacter grimontii]]| CCUG 889| CIP 107470| CIP 64.5| DSM 14968 [[Acinetobacter grimontii]]| DSM 6964| LMG 998| LMG:998| NCTC 12153| strain 17A04 [[Acinetobacter grimontii]]| strain Mannheim 2723/59
Actinomycetales [order]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Actinomycetales| Actinomycetales Buchanan 1917 (Approved Lists 1980) emend Stackebrandt et al. 1997| Actinomycetales Buchanan 1917 (Approved Lists 1980) emend. Zhi et al. 2009| Actinomycineae| Actinomycineae Stackebrandt et al. 1997 emend. Zhi et al. 2009
Actinomycetes [class]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Actinobacteria| Actinobacteria Stackebrandt et al. 1997| Actinobacteria Stackebrandt et al. 1997 emend. Nouioui et al. 2018| Actinobacteridae| Actinobacteridae Stackebrandt et al. 1997 emend. Zhi et al. 2009| Actinomycetes| Actinomycetes Krasil'nikov 1949| high G+C Gram-positive bacteria| high GC Gram+| High GC gram-positive bacteria
Actinomycetota [phylum]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Actinobacteraeota| Actinobacteraeota Oren et al. 2015| Actinobacteria| Actinobacteriota
Aeromonas [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Aeromonas| Aeromonas Stanier 1943
Pathogen
Agathobacter rectalis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacteroides rectalis" Hauduroy et al. 1937| "Pseudobacterium rectale" (Hauduroy et al. 1937) Krasil'nikov 1949| 'Roseburia rectale'| [Eubacterium] rectale| Agathobacter rectalis| Agathobacter rectalis (Hauduroy et al. 1937) Rosero et al. 2016| ATCC 33656| Bacteroides rectalis| CIP 105953| DSM 17629| Eubacterium rectale| Eubacterium rectale (Hauduroy et al. 1937) Prevot 1938| NCIMB 14373| not ATCC 25578| not VPI 0989| Pseudobacterium rectale| Roseburia rectale| strain A1-86| VPI 0990
Akkermansia muciniphila [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Akkermansia muciniphila| Akkermansia muciniphila Derrien et al. 2004 emend. Hahnke et al. 2016| Akkermansia sp. YL44| ATCC BAA-835| CIP 107961| strain Muc
Alistipes [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Alistipes| Alistipes Rautio et al. 2003
Alistipes onderdonkii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Alistipes onderdonkii| Alistipes onderdonkii Song et al. 2006| Alistipes sp. WAL 8169| ATCC BAA-1178| CCUG 48946| DSM 19147| JCM 16771| WAL 8169
Anaerobutyricum hallii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Anaerobutyricum hallii| Anaerobutyricum hallii (Holdeman and Moore 1974) Shetty et al. 2018| ATCC 27751| DSM 3353| Eubacterium hallii| Eubacterium hallii Holdeman and Moore 1974| VPI B4-27
Bacilli [class]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bacilli| Bacilli Ludwig et al. 2010| Bacillus/Lactobacillus/Streptococcus group| Firmibacteria| Firmibacteria Murray 1988
Bacillota [phylum]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Bacillaeota| Bacillaeota Oren et al. 2015| Bacillota| Bacillus/Clostridium group| clostridial firmicutes| Clostridium group firmicutes| Firmacutes| Firmicutes| Firmicutes corrig. Gibbons and Murray 1978| Low G+C firmicutes| low G+C Gram-positive bacteria| low GC Gram+
Bacteroides [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Ristella" Prevot 1938| Bacteroides| Bacteroides Castellani and Chalmers 1919 (Approved Lists 1980) emend. Shah and Collins 1989| Capsularis| Capsularis Prevot 1938 (Approved Lists 1980)| Ristella
Bacteroides fragilis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacteroides inaequalis" Eggerth and Gagnon 1933| "Bacteroides incommunis" Eggerth and Gagnon 1933| "Bacteroides uncatus" Eggerth and Gagnon 1933| "Fusiformis fragilis" Topley and Wilson 1929| "Pseudobacterium fragilis" Krasil'nikov 1949| "Pseudobacterium inaequalis" (Eggerth and Gagnon 1933) Krasil'nikov 1949| "Pseudobacterium incommunis" (Eggerth and Gagnon 1933) Krasil'nikov 1949| "Pseudobacterium uncatum" (Eggerth and Gagnon 1933) Krasil'nikov 1949| "Ristella fragilis" Prevot 1938| "Ristella incommunis" (Eggerth and Gagnon 1933) Prevot 1938| "Ristella uncata" (Eggerth and Gagnon 1933) Prevot 1938| "Sphaerophorus inaequalis" (Eggerth and Gagnon 1933) Prevot 1938| "Sphaerophorus intermedius" Bergan and Hovig 1968| ATCC 25285| Bacillus fragilis| Bacillus fragilis Veillon and Zuber 1898| Bacteroides fragilis| Bacteroides fragilis (Veillon and Zuber 1898) Castellani and Chalmers 1919 (Approved Lists 1980) emend. Hahnke et al. 2016| Bacteroides inaequalis| Bacteroides incommunis| Bacteroides sp. 2_1_16| Bacteroides sp. 2_1_56FAA| Bacteroides uncatus| CCUG 4856| CIP 77.16| DSM 2151| Fusiformis fragilis| JCM 11019| LMG 10263| LMG:10263| NCTC 9343| Pseudobacterium fragilis| Pseudobacterium inaequalis| Pseudobacterium incommunis| Pseudobacterium uncatum| Ristella fragilis| Ristella incommunis| Ristella uncata| Sphaerophorus inaequalis| Sphaerophorus intermedius
H02076 Bacteroides infection
Bacteroides stercoris [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 43183| Bacteroides stercoris| Bacteroides stercoris Johnson et al. 1986| CCUG 38733| CIP 104203| JCM 9496| NCTC 13053| VPI B5-21
Bacteroides zoogleoformans [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacterium zoogleiformans" Weinberg et al. 1937| ATCC 33285| Bacterium zoogleiformans| Bacteroides zoogleoformans| Bacteroides zoogleoformans (Weinberg et al. 1937) Cato et al. 1982| Bacteroides zoogleoformans corrig. (Weinberg et al. 1937) Cato et al. 1982| Capsularis zoogleiformans| Capsularis zoogleiformans (sic) (Weinberg et al. 1937) Prevot 1938 (Approved Lists 1980)| Capsularis zoogleoformans| Capsularis zoogleoformans (Weinberg et al. 1937) Prevot 1938| Capsularis zoogleoformans corrig. (Weinberg et al. 1937) Prevot 1938| CCUG 20495| CIP 104479| JCM 16136| NCTC 13075| Prevotella zoogleoformans| Prevotella zoogleoformans (Weinberg et al. 1937) Shah and Collins 1990 emend. Moore et al. 1994| VPI D28K-1
Bifidobacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bifidibacterium" Prevot 1938| "Tissieria" Pribram 1929| Bifidibacterium| Bifidobacterium| Bifidobacterium Orla-Jensen 1924| Tissieria
Campylobacter coli [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Vibrio coli" Doyle 1948| ATCC 33559| Campylobacter coli| Campylobacter coli (Doyle 1948) Veron and Chatelain 1973| Campylobacter hyoilei| Campylobacter hyoilei Alderton et al. 1995| Campylobacter sp. OH-18-18281-4B| Campylobacter sp. OH-18-7816| CCUG 11283| CCUG 14540| CCUG:33450 [[Campylobacter hyoilei]]| CIP 70.80| DSM 4689| JCM 2529| LMG 6440| LMG 9860| LMG:6440| LMG:9860| NCTC 11366| strain RMIT 32A [[Campylobacter hyoilei]]| Vibrio coli
Campylobacter jejuni [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Campylobacter fetus subsp. jejuni" Smibert 1974| "Vibrio hepaticus" Mathey and Rissberger 1964| "Vibrio jejuni" Jones et al. 1931| ATCC 33560| Campylobacter fetus subsp. jejuni| Campylobacter jejuni| Campylobacter jejuni (Jones et al. 1931) Veron and Chatelain 1973| Campylobacter sp. AG18-0001| Campylobacter sp. AG18-0002| Campylobacter sp. AG18-0003| Campylobacter sp. AG18-0027| Campylobacter sp. CFSAN080682| Campylobacter sp. OH-13-16058| Campylobacter sp. OH-13-16470-3| Campylobacter sp. OH-13-28726| Campylobacter sp. OH-18-10249| Campylobacter sp. OH-18-14936| Campylobacter sp. OH-18-15124| Campylobacter sp. OH-18-15133| Campylobacter sp. OH-18-15144| Campylobacter sp. OH-18-15321-1| Campylobacter sp. OH-18-15321-2| Campylobacter sp. OH-18-15321-3| Campylobacter sp. OH-18-15321-4| Campylobacter sp. OH-18-18281-4A| Campylobacter sp. OH-18-19951-2| Campylobacter sp. OH-18-8054| CCUG 11284| CIP 70.2| DSM 4688| LMG 8841| LMG:8841| NCTC 11351| Vibrio hepaticus| Vibrio jejuni
Gastroenteritis, Guillain-Barré syndrome
Campylobacter lari [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 35221| Campylobacter lari| Campylobacter lari corrig. Benjamin et al. 1984 emend. Debruyne et al. 2009| Campylobacter laridis| CCUG 23947| CIP 102722| DSM 11375| JCM 2530| LMG 8846| LMG:8846| NCTC 11352| WRI 3034/77
Candida parapsilosis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
Catenibacterium mitsuokai [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Catenibacterium mitsuokai| Catenibacterium mitsuokai Kageyama and Benno 2000| CCUG 48821 A| CCUG 48821 B| CIP 106738| DSM 15897| JCM 10609| strain RCA 14-39
Clostridia [class]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Clostridia| Clostridia Rainey 2010
Clostridioides difficile [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus difficilis" Hall and O'Toole 1935| "Peptoclostridium difficile" Yutin and Galperin 2013| AS 1.2184| ATCC 9689| Bacillus difficilis| BCRC 10642| CCRC 10642| CCRC:10642| CCUG 4938| CIP 104282| Clostridioides difficile| Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016| Clostridium difficile| Clostridium difficile (Hall and O'Toole 1935) Prevot 1938 (Approved Lists 1980)| Clostridium difficle| Clostridium sp. HMSC19D05| DSM 1296| DSMZ 1296| JCM 1296| LMG 15861| LMG:15861| NCIMB 10666| NCTC 11209| Peptoclostridium difficile
Colitis
Coprobacillus cateniformis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| CIP 106690| Coprobacillus catenaformis| Coprobacillus cateniformis| Coprobacillus cateniformis corrig. Kageyama and Benno 2000| Coprobacillus sp. 29_1| Coprobacillus sp. D6| JCM 10604| strain RCA1-24
Dialister invisus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| CCUG 47026| Dialister invisus| Dialister invisus Downes et al. 2003| DSM 15470| JCM 17566| strain E7.25
Dorea [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Dorea| Dorea Taras et al. 2002
Edwardsiella tarda [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
Enterobacter cloacae [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Aerobacter cloacae" (Jordan 1890) Bergey et al. 1923| "Aerobacter cloacae" (Jordan 1890) Hormaeche and Edwards 1958| "Bacillus cloacae" Jordan 1890| "Bacterium cloacae" (Jordan 1890) Lehmann and Neumann 1896| "Cloaca cloacae" (Jordan 1890) Castellani and Chalmers 1919| 'Enterobacter hormaechei subsp. grimontii'| Achromobacter sp. ATCC13047| Aerobacter cloacae| ATCC 13047| Bacillus cloacae| Bacterium cloacae| CCUG 28448| CCUG 29301| CCUG 6323| CIP 60.85| Cloaca cloacae| DSM 30054| Enterobacter cloacae| Enterobacter cloacae (Jordan 1890) Hormaeche and Edwards 1960| Enterobacter hormaechei subsp. grimontii| Enterobacter sp. DIV140| Enterobacter sp. DIV160| Enterobacter sp. DIV167| Enterobacter sp. ES-2| Enterobacter sp. JS08.Deg01| Enterobacter sp. NCIM 2164| Enterobacter sp. PX-A-E.1| HAMBI 1295| HAMBI 96| IFO 13535| JCM 1232| Klebsiella sp. SBP-8| LMG 2783| LMG:2783| NBRC 13535| NCTC 10005
Enterobacteriaceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Enterobacteraceae| Enterobacteraceae (ex Lapage 1979) Lapage 1982| Enterobacteriaceae| Enterobacteriaceae (ex Rahn 1937) Ewing et al. 1980| Enterobacteriaceae Rahn 1937 (Approved Lists 1980) emend. Adeolu et al. 2016| gamma-3 proteobacteria
Escherichia [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Escherichia| Escherichia Castellani and Chalmers 1919
Escherichia coli [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus coli" Migula 1895| "Bacterium coli commune" Escherich 1885| "Bacterium coli" (Migula 1895) Lehmann and Neumann 1896| ATCC 11775| Bacillus coli| bacterium 10a| Bacterium coli| Bacterium coli commune| bacterium E3| CCUG 24| CCUG 29300| CIP 54.8| DSM 30083| E. coli| Enterococcus coli| Escherichia coli| Escherichia coli (Migula 1895) Castellani and Chalmers 1919| Escherichia sp. 3_2_53FAA| Escherichia sp. MAR| Escherichia/Shigella coli| JCM 1649| LMG 2092| LMG:2092| NBRC 102203| NCCB 54008| NCTC 9001
Diarrheal disease in children and travelers, Foodborne diarrhea outbreaks, hemorrhagic colitis, hemolytic-uremic syndrome
Faecalibacterium prausnitzii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus mucosus anaerobius" Prausnitz 1922| "Bacteroides praussnitzii" (sic) Hauduroy et al. 1937| ATCC 27768| Bacillus mucosus anaerobius| Bacteroides praussnitzii| butyrate-producing bacterium A2-165| Faecalibacterium prausnitzii| Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002| Fusobacterium prausnitzii| Fusobacterium prausnitzii (Hauduroy et al. 1937) Moore and Holdeman 1970 (Approved Lists 1980)| NCIMB 13872
Holdemanella biformis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacteroides biformis" Eggerth 1935| "Pseudobacterium biforme" (Eggerth 1935) Krasil'nikov 1949| ATCC 27806| Bacteroides biformis| CCUG 28091| DSM 3989| Eubacterium biforme| Eubacterium biforme (Eggerth 1935) Prevot 1938| Holdemanella biformis| Holdemanella biformis (Eggerth 1935) De Maesschalck et al. 2014| Pseudobacterium biforme
Klebsiella oxytoca [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus oxytocus perniciosus" Flugge 1886| ATCC 13182| Bacillus oxytocus perniciosus| CCUG 15717| CIP 103434| DSM 5175| HAMBI 1301| JCM 1665| Klebsiella oxytoca| Klebsiella oxytoca (Flugge 1886) Lautrop 1956| Klebsiella sp. CECRI-24/07| Klebsiella sp. MN9SED2| LMG 3055| LMG:3055| NBRC 102593| NBRC 105695
Lachnospiraceae [family]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Lachnospiraceae| Lachnospiraceae Rainey 2010
Lactobacillus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Lactobacillus| Lactobacillus Beijerinck 1901 (Approved Lists 1980) emend. Cai et al. 2012| Lactobacillus Beijerinck 1901 (Approved Lists 1980) emend. Haakensen et al. 2009| Paralactobacillus| Paralactobacillus Leisner et al. 2000
Pathogen
Ligilactobacillus ruminis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 27780| CCUG 39465| CIP 103153| DSM 20403| JCM 1152| Lactobacillus ruminis| Lactobacillus ruminis Sharpe et al. 1973| LMG 10756| LMG:10756| NBRC 102161| NRRL B-14853
Megasphaera micronuciformis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| CCUG 45952| CIP 107280| Megasphaera micronuciformis| Megasphaera micronuciformis Marchandin et al. 2003| strain AIP 412.00
Metamycoplasma hominis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Asterococcus hominis" (Freundt 1953) Prevot 1961| "Micromyces hominis group I" Freundt 1953| "Schizoplasma hominis" (Freundt 1953) Furness 1970| Asterococcus hominis| ATCC 23114| CIP 103715| DSM 25592| IFO 14850| Micromyces hominis group I| Mycoplasma hominis| Mycoplasma hominis (Freundt 1953) Edward 1955| NBRC 14850| NCTC 10111| Schizoplasma hominis| strain PG21
Pelvic inflammatory disease, bacterial vaginosis
Parabacteroides [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Parabacteroides| Parabacteroides Sakamoto and Benno 2006
BMI, fat percent,blood pressure
Parabacteroides johnsonii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| DSM 18315| JCM 13406| Parabacteroides johnsonii| Parabacteroides johnsonii Sakamoto et al. 2007 emend. Hahnke et al. 2016| strain M-165
Pediococcus acidilactici [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Pediococcus lindneri" Henneberg 1926| BCRC 80335 [[Pediococcus lolii]]| CCUG 32235| CIP 103408| DSM 19927 [[Pediococcus lolii]]| DSM 20284| JCM 15055 [[Pediococcus lolii]]| Lactobacillus sp. Lact11| LMG 11384| LMG:11384| NCFB 2767| NCIMB 12174| Pediococcus acidilactici| Pediococcus acidilactici Lindner 1887 (Approved Lists 1980) emend. Judicial Commission 1996| Pediococcus lindneri| Pediococcus lolii| Pediococcus lolii Doi et al. 2009| strain B213c| strain Back S213C| strain NGRI 0510Q [[Pediococcus lolii]]
Phascolarctobacterium [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Phascolarctobacterium| Phascolarctobacterium Del Dot et al. 1994
Plesiomonas shigelloides [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Aeromonas shigelloides" (Bader 1954) Ewing et al. 1961| "Fergusonia shigelloides" (Bader 1954) Sebald and Vron 1963| "Pseudomonas shigelloides" Bader 1954| Aeromonas shigelloides| ATCC 14029| CCUG 410| CIP 63.5| DSM 8224| Fergusonia shigelloides| LMG 4242| LMG:4242| NCCB 80007| NCIMB 9242| NCTC 10360| Pleisomonas shigelloides| Plesiomonas shigelloides| Plesiomonas shigelloides corrig. (Bader 1954) Habs and Schubert 1962| Pseudomonas shigelloides
Gastroenteritis
Prevotella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Prevotella| Prevotella Shah and Collins 1990 emend. Sakamoto and Ohkuma 2012| Prevotella Shah and Collins 1990 emend. Willems and Collins 1995| Xylanibacter| Xylanibacter Ueki et al. 2006
Pseudomonadota [phylum]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Alphaproteobacteraeota| Alphaproteobacteraeota Oren et al. 2015| Alphaproteobacteriota| Proteobacteria| Proteobacteria [class] Stackebrandt et al. 1988| Proteobacteria Garrity et al. 2005| purple bacteria| purple bacteria and relatives| purple non-sulfur bacteria| purple photosynthetic bacteria| purple photosynthetic bacteria and relatives
Pseudomonas aeruginosa [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885| "Bacillus pyocyaneus" (Zopf 1884) Flugge 1886| "Bacterium aeruginosum" Cohn 1872| "Bacterium aeruginosum" Schroeter 1872| "Bacterium pyocyaneum" (Zopf 1884) Lehmann and Neumann 1896| "Micrococcus pyocyaneus" Zopf 1884| "Pseudomonas pyocyanea" (Zopf 1884) Migula 1895| ATCC 10145| ATCC 10145-U| Bacillus aeruginosus| Bacillus pyocyaneus| Bacterium aeruginosum| bacterium ASFP-37| bacterium ASFP-38| bacterium ASFP-45| bacterium ASFP-46| bacterium ASFP-48| bacterium CRM125| Bacterium pyocyaneum| CCEB 481| CCUG 28447| CCUG 29297| CCUG 551| CFBP 2466| CIP 100720| DSM 50071| IBCS 277| IFO 12689| JCM 5962| LMG 1242| LMG:1242| Micrococcus pyocyaneus| NBRC 12689| NCCB 76039| NCIB 8295| NCIB:8295| NCIMB 8295| NCTC 10332| NRRL B-771| probable synonym or variety: "Pseudomonas polycolor" Clara 1930| Pseudomonas aeruginosa| Pseudomonas aeruginosa (Schroeter 1872) Migula 1900| Pseudomonas polycolor| Pseudomonas pyocyanea| Pseudomonas sp. 2_1_26| Pseudomonas sp. ACP_02| Pseudomonas sp. CRRI 93| Pseudomonas sp. HSA1/2016| Pseudomonas sp. NCIM 2036| Pseudomonas sp. NCIM 2862| Pseudomonas sp. PR_01| Pseudomonas sp. PSE5| Pseudomonas sp. RV3| Pseudomonas sp. UFT2/2016| RH 815| VKM B-588
Opportunistic, nosocomial pneumonia and sepsis
Ruminococcus albus [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 27210| DSM 20455| JCM 14654| Ruminococcus albus| Ruminococcus albus Hungate 1957| strain 7
Ruminococcus bromii [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 27255| Ruminococcus bromii| Ruminococcus bromii Moore et al. 1972
Saccharomyces cerevisiae [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 18824| baker's yeast| brewer's yeast| Candida robusta| CBS 1171| NRRL Y-12632| S. cerevisiae| Saccharomyces capensis| Saccharomyces cerevisiae| Saccharomyces italicus| Saccharomyces oviformis| Saccharomyces uvarum var. melibiosus
Salmonella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Salmonella| Salmonella Lignieres 1900
Pathogen
Shigella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Shigella| Shigella Castellani and Chalmers 1919
Pathogen
Streptococcus [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Streptococcus| Streptococcus Rosenbach 1884
Streptococcus agalactiae [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Streptoccocus de la mammite" Nocard and Mollereau 1887| "Streptococcus agalactiae contagiosae" Kitt 1893| "Streptococcus mastitidis" Migula 1900| ATCC 13813| ATCC 51487 [[Streptococcus difficilis corrig. Eldar et al. 1995]]| CCUG 4208| CIP 103227| CIP 103768 [[Streptococcus difficilis corrig. Eldar et al. 1995]]| DSM 2134| JCM 5671| LMG 14694| LMG 15977 [[Streptococcus difficilis corrig. Eldar et al. 1995]]| LMG:14694| LMG:15977 [[Streptococcus difficilis corrig. Eldar et al. 1995]]| NCTC 8181| strain ND 2-22 [[Streptococcus difficilis corrig. Eldar et al. 1995]]| Streptoccocus de la mammite| Streptococcus agalactiae| Streptococcus agalactiae contagiosae| Streptococcus agalactiae Lehmann and Neumann 1896| Streptococcus difficile| Streptococcus difficilis| Streptococcus difficilis corrig. Eldar et al. 1995| Streptococcus mastitidis
Postpartum infection, neonatal sepsis
Streptococcus salivarius [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 7073| CCUG 11878| CCUG 17825| CCUG 50207| CIP 102503| DSM 20560| HAMBI 1716| JCM 5707| LMG 11489| LMG:11489| NCFB 1779| NCIMB 701779| NCTC 8618| Streptococcus salivarius| Streptococcus salivarius Andrewes and Horder 1906| Streptococcus salivarius subsp. salivarius| Streptococcus salivarius subsp. salivarius Andrewes and Horder 1906| Streptococcus sp. FStet12| Streptococcus sp. HSISS4
Infectious bacteria
Streptococcus sanguinis [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| ATCC 10556| CCUG 17826| CCUG 35770| CIP 55.128| DSM 20567| JCM 5708| LMG 14702| LMG:14702| NCTC 7863| strain SK1| Streptococcus sanguinis| Streptococcus sanguinis corrig. White and Niven 1946 (Approved Lists 1980) emend. Kilian et al. 1989
Not Healthy Predictor
Veillonella [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Veillonella| Veillonella Prevot 1933 (Approved Lists 1980) emend. Aujoulat et al. 2014| Veillonella Prevot 1933 (Approved Lists 1980) emend. Mays et al. 1982
Vibrio cholerae [species]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| "Bacillo virgola del Koch" Trevisan 1884| "Bacillus cholerae" (Pacini 1854) Trevisan 1884| "Bacillus cholerae-asiaticae" Trevisan 1884| "Kommabacillus" Koch 1884| "Liquidivibrio cholerae" (Pacini 1854) Orla-Jensen 1909| "Microspira comma" Schroeter 1886| "Pacinia cholerae-asiaticae" (Trevisan 1884) Trevisan 1885| "Spirillum cholerae" (Pacini 1854) Mac1889| "Spirillum cholerae-asiaticae" (Trevisan 1884) Zopf 1885| "Vibrio cholera" (sic) Pacini 1854| "Vibrio cholerae-asiaticae" (Trevisan 1884) Pfeiffer 1896| "Vibrio comma" (Schroeter 1886) Blanchard 1906| ATCC 14035| ATCC 14547 [[Vibrio albensis]]| Bacillo virgola del Koch| Bacillus cholerae| Bacillus cholerae-asiaticae| CCUG 48664 [[Vibrio albensis]]| CCUG 9118 A| CECT 514| CIP 62.13| Kommabacillus| Liquidivibrio cholerae| LMG 4406 [[Vibrio albensis]]| LMG:4406 [[Vibrio albensis]]| Microspira comma| NCIMB 41 [[Vibrio albensis]]| NCTC 8021| Pacinia cholerae-asiaticae| Spirillum cholerae| Spirillum cholerae-asiaticae| Vibrio albensis| Vibrio albensis Lehmann and Neumann 1896| Vibrio cholera| Vibrio cholerae| Vibrio cholerae biovar albensis| Vibrio cholerae bv. albensis| Vibrio cholerae Pacini 1854| Vibrio cholerae-asiaticae| Vibrio comma
Cholera
Yersinia [genus]
↓↓↓ Very Low or none
↓↓ Very Low
↓ Low
✓ Normal
↑ High
↑↑ Very High
↑↑↑ Extremely High
| Yersinia| Yersinia van Loghem 1944