National Library of Medicine Citations for Depression

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

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A percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary values.

Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetia (NCBI:1760 ) Low Distribution    ๐Ÿ“š PubMed
class Bacteroidia (NCBI:200643 ) Low Distribution    ๐Ÿ“š PubMed
class Gammaproteobacteria (NCBI:1236 ) High Distribution    ๐Ÿ“š PubMed
family Acidaminococcaceae (NCBI:909930 ) High Distribution    ๐Ÿ“š PubMed
family Bacteroidaceae (NCBI:815 ) High Distribution    ๐Ÿ“š PubMed
family Bacteroidaceae (NCBI:815 ) High Distribution    ๐Ÿ“š PubMed
family Bacteroidaceae (NCBI:815 ) Low Distribution    ๐Ÿ“š PubMed
family Bifidobacteriaceae (NCBI:31953 ) High Distribution    ๐Ÿ“š PubMed
family Chitinophagaceae (NCBI:563835 ) Low Distribution    ๐Ÿ“š PubMed
family Clostridiales Family IV. Incertae Sedis (NCBI:1689151 ) High Distribution    ๐Ÿ“š PubMed
family Clostridiales Family XI. Incertae Sedis (NCBI:543310 ) High Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    ๐Ÿ“š PubMed
family Erysipelotrichaceae (NCBI:128827 ) High Distribution    ๐Ÿ“š PubMed
family Eubacteriaceae (NCBI:186806 ) High Distribution    ๐Ÿ“š PubMed
family Fusobacteriaceae (NCBI:203492 ) High Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Lactobacillaceae (NCBI:33958 ) High Distribution    ๐Ÿ“š PubMed
family Nocardiaceae (NCBI:85025 ) High Distribution    ๐Ÿ“š PubMed
family Oscillospiraceae (NCBI:216572 ) Low Distribution    ๐Ÿ“š PubMed
family Porphyromonadaceae (NCBI:171551 ) High Distribution    ๐Ÿ“š PubMed
family Porphyromonadaceae (NCBI:171551 ) High Distribution    ๐Ÿ“š PubMed
family Prevotellaceae (NCBI:171552 ) Low Distribution    ๐Ÿ“š PubMed
family Rhodospirillaceae (NCBI:41295 ) High Distribution    ๐Ÿ“š PubMed
family Rikenellaceae (NCBI:171550 ) High Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    ๐Ÿ“š PubMed
family Streptococcaceae (NCBI:1300 ) High Distribution    ๐Ÿ“š PubMed
family Streptomycetaceae (NCBI:2062 ) High Distribution    ๐Ÿ“š PubMed
family Sutterellaceae (NCBI:995019 ) Low Distribution    ๐Ÿ“š PubMed
family Veillonellaceae (NCBI:31977 ) Low Distribution    ๐Ÿ“š PubMed
genus Actinomyces (NCBI:1654 ) High Distribution    ๐Ÿ“š PubMed
genus Alistipes (NCBI:239759 ) High Distribution    ๐Ÿ“š PubMed
genus Anaerofilum (NCBI:52784 ) High Distribution    ๐Ÿ“š PubMed
genus Anaerostipes (NCBI:207244 ) High Distribution    ๐Ÿ“š PubMed
genus Asaccharobacter (NCBI:553372 ) High Distribution    ๐Ÿ“š PubMed
genus Atopobium (NCBI:1380 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    ๐Ÿ“š PubMed
genus Blautia (NCBI:572511 ) High Distribution    ๐Ÿ“š PubMed
genus Blautia (NCBI:572511 ) Low Distribution    ๐Ÿ“š PubMed
genus Blautia (NCBI:572511 ) Low Distribution    ๐Ÿ“š PubMed
genus Butyricimonas (NCBI:574697 ) High Distribution    ๐Ÿ“š PubMed
genus Clostridium (NCBI:1485 ) High Distribution    ๐Ÿ“š PubMed
genus Coprococcus (NCBI:33042 ) Low Distribution    ๐Ÿ“š PubMed
genus Coprococcus (NCBI:33042 ) Low Distribution    ๐Ÿ“š PubMed
genus Desulfovibrio (NCBI:872 ) High Distribution    ๐Ÿ“š PubMed
genus Desulfovibrio (NCBI:872 ) High Distribution    ๐Ÿ“š PubMed
genus Dialister (NCBI:39948 ) Low Distribution    ๐Ÿ“š PubMed
genus Dialister (NCBI:39948 ) Low Distribution    ๐Ÿ“š PubMed
genus Eggerthella (NCBI:84111 ) High Distribution    ๐Ÿ“š PubMed
genus Escherichia (NCBI:561 ) Low Distribution    ๐Ÿ“š PubMed
genus Escherichia (NCBI:561 ) Low Distribution    ๐Ÿ“š PubMed
genus Eubacterium (NCBI:1730 ) High Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) High Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    ๐Ÿ“š PubMed
genus Flavonifractor (NCBI:946234 ) High Distribution    ๐Ÿ“š PubMed
genus Flavonifractor (NCBI:946234 ) High Distribution    ๐Ÿ“š PubMed
genus Gelria (NCBI:189326 ) High Distribution    ๐Ÿ“š PubMed
genus Haemophilus (NCBI:724 ) Low Distribution    ๐Ÿ“š PubMed
genus Holdemania (NCBI:61170 ) High Distribution    ๐Ÿ“š PubMed
genus Howardella (NCBI:404402 ) Low Distribution    ๐Ÿ“š PubMed
genus Hungatella (NCBI:1649459 ) High Distribution    ๐Ÿ“š PubMed
genus Klebsiella (NCBI:570 ) High Distribution    ๐Ÿ“š PubMed
genus Lachnospira (NCBI:28050 ) High Distribution    ๐Ÿ“š PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    ๐Ÿ“š PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    ๐Ÿ“š PubMed
genus Lutispora (NCBI:667112 ) Low Distribution    ๐Ÿ“š PubMed
genus Murimonas (NCBI:1774128 ) Low Distribution    ๐Ÿ“š PubMed
genus Olsenella (NCBI:133925 ) High Distribution    ๐Ÿ“š PubMed
genus Oscillibacter (NCBI:459786 ) High Distribution    ๐Ÿ“š PubMed
genus Oscillibacter (NCBI:459786 ) High Distribution    ๐Ÿ“š PubMed
genus Oscillibacter (NCBI:459786 ) Low Distribution    ๐Ÿ“š PubMed
genus Parabacteroides (NCBI:375288 ) High Distribution    ๐Ÿ“š PubMed
genus Parabacteroides (NCBI:375288 ) High Distribution    ๐Ÿ“š PubMed
genus Paraprevotella (NCBI:577309 ) High Distribution    ๐Ÿ“š PubMed
genus Parasutterella (NCBI:577310 ) High Distribution    ๐Ÿ“š PubMed
genus Parvimonas (NCBI:543311 ) High Distribution    ๐Ÿ“š PubMed
genus Phascolarctobacterium (NCBI:33024 ) High Distribution    ๐Ÿ“š PubMed
genus Porphyromonas (NCBI:836 ) High Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) High Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) High Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) Low Distribution    ๐Ÿ“š PubMed
genus Pyramidobacter (NCBI:638847 ) Low Distribution    ๐Ÿ“š PubMed
genus Roseburia (NCBI:841 ) High Distribution    ๐Ÿ“š PubMed
genus Roseburia (NCBI:841 ) High Distribution    ๐Ÿ“š PubMed
genus Shigella (NCBI:620 ) Low Distribution    ๐Ÿ“š PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    ๐Ÿ“š PubMed
genus Streptococcus (NCBI:1301 ) Low Distribution    ๐Ÿ“š PubMed
genus Sutterella (NCBI:40544 ) Low Distribution    ๐Ÿ“š PubMed
genus Turicibacter (NCBI:191303 ) High Distribution    ๐Ÿ“š PubMed
genus Veillonella (NCBI:29465 ) Low Distribution    ๐Ÿ“š PubMed
order Bacteroidales (NCBI:171549 ) High Distribution    ๐Ÿ“š PubMed
order Bacteroidales (NCBI:171549 ) Low Distribution    ๐Ÿ“š PubMed
order Eggerthellales (NCBI:1643822 ) High Distribution    ๐Ÿ“š PubMed
order Eubacteriales (NCBI:186802 ) High Distribution    ๐Ÿ“š PubMed
phylum Acidobacteria (NCBI:57723 ) High Distribution    ๐Ÿ“š PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    ๐Ÿ“š PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    ๐Ÿ“š PubMed
phylum Actinobacteria (NCBI:201174 ) Low Distribution    ๐Ÿ“š PubMed
phylum Bacteroidetes (NCBI:976 ) Low Distribution    ๐Ÿ“š PubMed
phylum Fibrobacteres (NCBI:65842 ) Low Distribution    ๐Ÿ“š PubMed
phylum Firmicutes (NCBI:1239 ) Low Distribution    ๐Ÿ“š PubMed
phylum Fusobacteria (NCBI:32066 ) Low Distribution    ๐Ÿ“š PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    ๐Ÿ“š PubMed
species Anaerotignum propionicum (NCBI:28446 ) High Distribution    ๐Ÿ“š PubMed
species Bacteroides caecigallinarum (NCBI:1411144 ) High Distribution    ๐Ÿ“š PubMed
species Bifidobacterium breve (NCBI:1685 ) Low Distribution    ๐Ÿ“š PubMed
species Coprococcus comes (NCBI:410072 ) Low Distribution    ๐Ÿ“š PubMed
species Desulfovibrio piger (NCBI:901 ) Low Distribution    ๐Ÿ“š PubMed
species Enterocloster bolteae (NCBI:208479 ) High Distribution    ๐Ÿ“š PubMed
species Escherichia sp. (NCBI:1884818 ) High Distribution    ๐Ÿ“š PubMed
species Francisella tularensis (NCBI:263 ) Low Distribution    ๐Ÿ“š PubMed
species Hungatella hathewayi (NCBI:154046 ) High Distribution    ๐Ÿ“š PubMed
species Lacticaseibacillus paracasei (NCBI:1597 ) High Distribution    ๐Ÿ“š PubMed
species Lacticaseibacillus paracasei (NCBI:1597 ) Low Distribution    ๐Ÿ“š PubMed
species Parabacteroides distasonis (NCBI:823 ) High Distribution    ๐Ÿ“š PubMed
species Ruminococcus callidus (NCBI:40519 ) Low Distribution    ๐Ÿ“š PubMed
suborder Coriobacterineae (NCBI:255727 ) High Distribution    ๐Ÿ“š PubMed

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