National Library of Medicine Citations for Depression

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

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A percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary values.

Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetia (NCBI:1760 ) Low Distribution    📚 PubMed
class Bacteroidia (NCBI:200643 ) Low Distribution    📚 PubMed
class Gammaproteobacteria (NCBI:1236 ) High Distribution    📚 PubMed
family Acidaminococcaceae (NCBI:909930 ) High Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) High Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) High Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) Low Distribution    📚 PubMed
family Bifidobacteriaceae (NCBI:31953 ) High Distribution    📚 PubMed
family Chitinophagaceae (NCBI:563835 ) Low Distribution    📚 PubMed
family Clostridiales Family IV. Incertae Sedis (NCBI:1689151 ) High Distribution    📚 PubMed
family Clostridiales Family XI. Incertae Sedis (NCBI:543310 ) High Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) High Distribution    📚 PubMed
family Eubacteriaceae (NCBI:186806 ) High Distribution    📚 PubMed
family Fusobacteriaceae (NCBI:203492 ) High Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    📚 PubMed
family Lactobacillaceae (NCBI:33958 ) High Distribution    📚 PubMed
family Nocardiaceae (NCBI:85025 ) High Distribution    📚 PubMed
family Oscillospiraceae (NCBI:216572 ) Low Distribution    📚 PubMed
family Porphyromonadaceae (NCBI:171551 ) High Distribution    📚 PubMed
family Porphyromonadaceae (NCBI:171551 ) High Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) Low Distribution    📚 PubMed
family Rhodospirillaceae (NCBI:41295 ) High Distribution    📚 PubMed
family Rikenellaceae (NCBI:171550 ) High Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    📚 PubMed
family Streptococcaceae (NCBI:1300 ) High Distribution    📚 PubMed
family Streptomycetaceae (NCBI:2062 ) High Distribution    📚 PubMed
family Sutterellaceae (NCBI:995019 ) Low Distribution    📚 PubMed
family Veillonellaceae (NCBI:31977 ) Low Distribution    📚 PubMed
genus Actinomyces (NCBI:1654 ) High Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) High Distribution    📚 PubMed
genus Anaerofilum (NCBI:52784 ) High Distribution    📚 PubMed
genus Anaerostipes (NCBI:207244 ) High Distribution    📚 PubMed
genus Asaccharobacter (NCBI:553372 ) High Distribution    📚 PubMed
genus Atopobium (NCBI:1380 ) High Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low Distribution    📚 PubMed
genus Butyricimonas (NCBI:574697 ) High Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) High Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) Low Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) Low Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) Low Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) Low Distribution    📚 PubMed
genus Eggerthella (NCBI:84111 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) Low Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) Low Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) High Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) High Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Flavonifractor (NCBI:946234 ) High Distribution    📚 PubMed
genus Flavonifractor (NCBI:946234 ) High Distribution    📚 PubMed
genus Gelria (NCBI:189326 ) High Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) Low Distribution    📚 PubMed
genus Holdemania (NCBI:61170 ) High Distribution    📚 PubMed
genus Howardella (NCBI:404402 ) Low Distribution    📚 PubMed
genus Hungatella (NCBI:1649459 ) High Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High Distribution    📚 PubMed
genus Lachnospira (NCBI:28050 ) High Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Lutispora (NCBI:667112 ) Low Distribution    📚 PubMed
genus Murimonas (NCBI:1774128 ) Low Distribution    📚 PubMed
genus Olsenella (NCBI:133925 ) High Distribution    📚 PubMed
genus Oscillibacter (NCBI:459786 ) High Distribution    📚 PubMed
genus Oscillibacter (NCBI:459786 ) High Distribution    📚 PubMed
genus Oscillibacter (NCBI:459786 ) Low Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High Distribution    📚 PubMed
genus Paraprevotella (NCBI:577309 ) High Distribution    📚 PubMed
genus Parasutterella (NCBI:577310 ) High Distribution    📚 PubMed
genus Parvimonas (NCBI:543311 ) High Distribution    📚 PubMed
genus Phascolarctobacterium (NCBI:33024 ) High Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low Distribution    📚 PubMed
genus Pyramidobacter (NCBI:638847 ) Low Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) High Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) High Distribution    📚 PubMed
genus Shigella (NCBI:620 ) Low Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) Low Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) Low Distribution    📚 PubMed
genus Turicibacter (NCBI:191303 ) High Distribution    📚 PubMed
genus Veillonella (NCBI:29465 ) Low Distribution    📚 PubMed
order Bacteroidales (NCBI:171549 ) High Distribution    📚 PubMed
order Bacteroidales (NCBI:171549 ) Low Distribution    📚 PubMed
order Eggerthellales (NCBI:1643822 ) High Distribution    📚 PubMed
order Eubacteriales (NCBI:186802 ) High Distribution    📚 PubMed
phylum Acidobacteria (NCBI:57723 ) High Distribution    📚 PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    📚 PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    📚 PubMed
phylum Actinobacteria (NCBI:201174 ) Low Distribution    📚 PubMed
phylum Bacteroidetes (NCBI:976 ) Low Distribution    📚 PubMed
phylum Fibrobacteres (NCBI:65842 ) Low Distribution    📚 PubMed
phylum Firmicutes (NCBI:1239 ) Low Distribution    📚 PubMed
phylum Fusobacteria (NCBI:32066 ) Low Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
species Anaerotignum propionicum (NCBI:28446 ) High Distribution    📚 PubMed
species Bacteroides caecigallinarum (NCBI:1411144 ) High Distribution    📚 PubMed
species Bifidobacterium breve (NCBI:1685 ) Low Distribution    📚 PubMed
species Coprococcus comes (NCBI:410072 ) Low Distribution    📚 PubMed
species Desulfovibrio piger (NCBI:901 ) Low Distribution    📚 PubMed
species Enterocloster bolteae (NCBI:208479 ) High Distribution    📚 PubMed
species Escherichia sp. (NCBI:1884818 ) High Distribution    📚 PubMed
species Francisella tularensis (NCBI:263 ) Low Distribution    📚 PubMed
species Hungatella hathewayi (NCBI:154046 ) High Distribution    📚 PubMed
species Lacticaseibacillus paracasei (NCBI:1597 ) High Distribution    📚 PubMed
species Lacticaseibacillus paracasei (NCBI:1597 ) Low Distribution    📚 PubMed
species Parabacteroides distasonis (NCBI:823 ) High Distribution    📚 PubMed
species Ruminococcus callidus (NCBI:40519 ) Low Distribution    📚 PubMed
suborder Coriobacterineae (NCBI:255727 ) High Distribution    📚 PubMed

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