National Library of Medicine Citations for Allergies

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

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Note these are associations and not causation. Items being high or low may be part of the immune response.

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A percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary values.

Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetia (NCBI:1760 ) High Distribution    ๐Ÿ“š PubMed
class Bacteroidia (NCBI:200643 ) High Distribution    ๐Ÿ“š PubMed
class Clostridia (NCBI:186801 ) High Distribution    ๐Ÿ“š PubMed
class Clostridia (NCBI:186801 ) High Distribution    ๐Ÿ“š PubMed
class Clostridia (NCBI:186801 ) Low Distribution    ๐Ÿ“š PubMed
family Acidaminococcaceae (NCBI:909930 ) Low Distribution    ๐Ÿ“š PubMed
family Bacteroidaceae (NCBI:815 ) High Distribution    ๐Ÿ“š PubMed
family Bacteroidaceae (NCBI:815 ) High Distribution    ๐Ÿ“š PubMed
family Bifidobacteriaceae (NCBI:31953 ) Low Distribution    ๐Ÿ“š PubMed
family Clostridiaceae (NCBI:31979 ) High Distribution    ๐Ÿ“š PubMed
family Comamonadaceae (NCBI:80864 ) High Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) Low Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) Low Distribution    ๐Ÿ“š PubMed
family Erysipelotrichaceae (NCBI:128827 ) High Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) High Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Lactobacillaceae (NCBI:33958 ) Low Distribution    ๐Ÿ“š PubMed
family Methylobacteriaceae (NCBI:119045 ) High Distribution    ๐Ÿ“š PubMed
family Oscillospiraceae (NCBI:216572 ) Low Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) High Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) High Distribution    ๐Ÿ“š PubMed
family Sphingomonadaceae (NCBI:41297 ) High Distribution    ๐Ÿ“š PubMed
genus Adlercreutzia (NCBI:447020 ) High Distribution    ๐Ÿ“š PubMed
genus Alistipes (NCBI:239759 ) Low Distribution    ๐Ÿ“š PubMed
genus Clostridium (NCBI:1485 ) Low Distribution    ๐Ÿ“š PubMed
genus Eggerthella (NCBI:84111 ) High Distribution    ๐Ÿ“š PubMed
genus Enhydrobacter (NCBI:212791 ) High Distribution    ๐Ÿ“š PubMed
genus Enterococcus (NCBI:1350 ) Low Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) High Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) High Distribution    ๐Ÿ“š PubMed
genus Lachnoclostridium (NCBI:1506553 ) High Distribution    ๐Ÿ“š PubMed
genus Lachnoclostridium (NCBI:1506553 ) High Distribution    ๐Ÿ“š PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    ๐Ÿ“š PubMed
genus Methanobrevibacter (NCBI:2172 ) High Distribution    ๐Ÿ“š PubMed
genus Methylobacterium (NCBI:407 ) High Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) Low Distribution    ๐Ÿ“š PubMed
genus Propionibacterium (NCBI:1743 ) High Distribution    ๐Ÿ“š PubMed
genus Turicibacter (NCBI:191303 ) High Distribution    ๐Ÿ“š PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    ๐Ÿ“š PubMed
phylum Bacteroidetes (NCBI:976 ) High Distribution    ๐Ÿ“š PubMed
phylum Firmicutes (NCBI:1239 ) High Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Bacteroides fragilis (NCBI:817 ) High Distribution    ๐Ÿ“š PubMed
species Bifidobacterium adolescentis (NCBI:1680 ) Low Distribution    ๐Ÿ“š PubMed
species Bifidobacterium adolescentis (NCBI:1680 ) Low Distribution    ๐Ÿ“š PubMed
species Bifidobacterium bifidum (NCBI:1681 ) High Distribution    ๐Ÿ“š PubMed
species Bifidobacterium catenulatum (NCBI:1686 ) High Distribution    ๐Ÿ“š PubMed
species Bifidobacterium longum (NCBI:216816 ) High Distribution    ๐Ÿ“š PubMed
species Blautia obeum (NCBI:40520 ) High Distribution    ๐Ÿ“š PubMed
species Clostridium difficile (NCBI:1496 ) High Distribution    ๐Ÿ“š PubMed
species Collinsella aerofaciens (NCBI:74426 ) High Distribution    ๐Ÿ“š PubMed
species Coprococcus catus (NCBI:116085 ) High Distribution    ๐Ÿ“š PubMed
species Dorea formicigenerans (NCBI:39486 ) High Distribution    ๐Ÿ“š PubMed
species Escherichia coli (NCBI:562 ) High Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    ๐Ÿ“š PubMed
species Oscillibacter valericigenes (NCBI:351091 ) High Distribution    ๐Ÿ“š PubMed
species Oscillibacter valericigenes (NCBI:351091 ) High Distribution    ๐Ÿ“š PubMed
species Phascolarctobacterium faecium (NCBI:33025 ) Low Distribution    ๐Ÿ“š PubMed
species Prevotella copri (NCBI:165179 ) Low Distribution    ๐Ÿ“š PubMed
species Ruminococcus bromii (NCBI:40518 ) Low Distribution    ๐Ÿ“š PubMed
species Staphylococcus aureus (NCBI:1280 ) Low Distribution    ๐Ÿ“š PubMed

All suggestions are computed solely on their predicted microbiome impact. Safety, side-effects etc must be evaluated by your medical professionals before starting. Some items suggests have significant risk of adverse consequences for some people.

Special thanks to David F Morrison and Geert Van Houcke for doing Quality Assurance. Special thanks to Oliver Luk, B.Sc. (Biology) from BiomeSight for spot checking the coding of data from the US National Library of Medicine

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