National Library of Medicine Citations for Obesity

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: PerplexityKagi LabsYou

Note these are associations and not causation. Items being high or low may be part of the immune response.

You do not have any samples under this email

A percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary values.

Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetia (NCBI:1760 ) High Distribution    ๐Ÿ“š PubMed
class Bacteroidia (NCBI:200643 ) Low Distribution    ๐Ÿ“š PubMed
class Clostridia (NCBI:186801 ) Low Distribution    ๐Ÿ“š PubMed
class Deferribacteres (NCBI:68337 ) High Distribution    ๐Ÿ“š PubMed
class Deltaproteobacteria (NCBI:28221 ) Low Distribution    ๐Ÿ“š PubMed
class Fusobacteriia (NCBI:203490 ) High Distribution    ๐Ÿ“š PubMed
class Mollicutes (NCBI:31969 ) High Distribution    ๐Ÿ“š PubMed
class Mollicutes (NCBI:31969 ) Low Distribution    ๐Ÿ“š PubMed
family Acidaminococcaceae (NCBI:909930 ) Low Distribution    ๐Ÿ“š PubMed
family Akkermansiaceae (NCBI:1647988 ) High Distribution    ๐Ÿ“š PubMed
family Burkholderiaceae (NCBI:119060 ) High Distribution    ๐Ÿ“š PubMed
family Christensenellaceae (NCBI:990719 ) High Distribution    ๐Ÿ“š PubMed
family Christensenellaceae (NCBI:990719 ) Low Distribution    ๐Ÿ“š PubMed
family Coriobacteriaceae (NCBI:84107 ) High Distribution    ๐Ÿ“š PubMed
family Desulfovibrionaceae (NCBI:194924 ) High Distribution    ๐Ÿ“š PubMed
family Desulfovibrionaceae (NCBI:194924 ) High Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    ๐Ÿ“š PubMed
family Erysipelotrichaceae (NCBI:128827 ) High Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Muribaculaceae (NCBI:2005473 ) Low Distribution    ๐Ÿ“š PubMed
family Odoribacteraceae (NCBI:1853231 ) Low Distribution    ๐Ÿ“š PubMed
family Oscillospiraceae (NCBI:216572 ) Low Distribution    ๐Ÿ“š PubMed
family Paludibacteraceae (NCBI:2005523 ) Low Distribution    ๐Ÿ“š PubMed
family Peptococcaceae (NCBI:186807 ) Low Distribution    ๐Ÿ“š PubMed
family Porphyromonadaceae (NCBI:171551 ) Low Distribution    ๐Ÿ“š PubMed
family Rikenellaceae (NCBI:171550 ) High Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) High Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    ๐Ÿ“š PubMed
genus Adlercreutzia (NCBI:447020 ) High Distribution    ๐Ÿ“š PubMed
genus Adlercreutzia (NCBI:447020 ) High Distribution    ๐Ÿ“š PubMed
genus Aggregatibacter (NCBI:416916 ) High Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) High Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Alistipes (NCBI:239759 ) High Distribution    ๐Ÿ“š PubMed
genus Alistipes (NCBI:239759 ) Low Distribution    ๐Ÿ“š PubMed
genus Alistipes (NCBI:239759 ) Low Distribution    ๐Ÿ“š PubMed
genus Alkaliphilus (NCBI:114627 ) Low Distribution    ๐Ÿ“š PubMed
genus Anaerostipes (NCBI:207244 ) Low Distribution    ๐Ÿ“š PubMed
genus Anaerotruncus (NCBI:244127 ) High Distribution    ๐Ÿ“š PubMed
genus Anaerotruncus (NCBI:244127 ) Low Distribution    ๐Ÿ“š PubMed
genus Bacillus (NCBI:55087 ) Low Distribution    ๐Ÿ“š PubMed
genus Bacillus (NCBI:1386 ) Low Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    ๐Ÿ“š PubMed
genus Bifidobacterium (NCBI:1678 ) High Distribution    ๐Ÿ“š PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    ๐Ÿ“š PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    ๐Ÿ“š PubMed
genus Bilophila (NCBI:35832 ) High Distribution    ๐Ÿ“š PubMed
genus Blautia (NCBI:572511 ) High Distribution    ๐Ÿ“š PubMed
genus Blautia (NCBI:572511 ) Low Distribution    ๐Ÿ“š PubMed
genus Blautia (NCBI:572511 ) Low Distribution    ๐Ÿ“š PubMed
genus Blautia (NCBI:572511 ) Low Distribution    ๐Ÿ“š PubMed
genus Burkholderia (NCBI:32008 ) High Distribution    ๐Ÿ“š PubMed
genus Butyricicoccus (NCBI:580596 ) High Distribution    ๐Ÿ“š PubMed
genus Butyricicoccus (NCBI:580596 ) Low Distribution    ๐Ÿ“š PubMed
genus Butyrivibrio (NCBI:830 ) High Distribution    ๐Ÿ“š PubMed
genus Butyrivibrio (NCBI:830 ) Low Distribution    ๐Ÿ“š PubMed
genus Catenibacterium (NCBI:135858 ) High Distribution    ๐Ÿ“š PubMed
genus Centipeda (NCBI:82202 ) Low Distribution    ๐Ÿ“š PubMed
genus Centipeda (NCBI:82283 ) Low Distribution    ๐Ÿ“š PubMed
genus Clostridium (NCBI:1485 ) High Distribution    ๐Ÿ“š PubMed
genus Collinsella (NCBI:102106 ) High Distribution    ๐Ÿ“š PubMed
genus Collinsella (NCBI:102106 ) Low Distribution    ๐Ÿ“š PubMed
genus Coprococcus (NCBI:33042 ) High Distribution    ๐Ÿ“š PubMed
genus Coprococcus (NCBI:33042 ) Low Distribution    ๐Ÿ“š PubMed
genus Desulfovibrio (NCBI:872 ) High Distribution    ๐Ÿ“š PubMed
genus Desulfovibrio (NCBI:872 ) Low Distribution    ๐Ÿ“š PubMed
genus Dialister (NCBI:39948 ) Low Distribution    ๐Ÿ“š PubMed
genus Dorea (NCBI:189330 ) High Distribution    ๐Ÿ“š PubMed
genus Dorea (NCBI:189330 ) Low Distribution    ๐Ÿ“š PubMed
genus Enterobacter (NCBI:547 ) High Distribution    ๐Ÿ“š PubMed
genus Erysipelatoclostridium (NCBI:1505663 ) Low Distribution    ๐Ÿ“š PubMed
genus Escherichia (NCBI:561 ) High Distribution    ๐Ÿ“š PubMed
genus Eubacterium (NCBI:1730 ) High Distribution    ๐Ÿ“š PubMed
genus Eubacterium (NCBI:1730 ) Low Distribution    ๐Ÿ“š PubMed
genus Eubacterium (NCBI:1730 ) Low Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    ๐Ÿ“š PubMed
genus Faecalibaculum (NCBI:1729679 ) High Distribution    ๐Ÿ“š PubMed
genus Flavobacterium (NCBI:237 ) Low Distribution    ๐Ÿ“š PubMed
genus Flavonifractor (NCBI:946234 ) High Distribution    ๐Ÿ“š PubMed
genus Fusobacterium (NCBI:848 ) Low Distribution    ๐Ÿ“š PubMed
genus Gemmiger (NCBI:204475 ) Low Distribution    ๐Ÿ“š PubMed
genus Gordonibacter (NCBI:644652 ) High Distribution    ๐Ÿ“š PubMed
genus Klebsiella (NCBI:570 ) High Distribution    ๐Ÿ“š PubMed
genus Klebsiella (NCBI:570 ) High Distribution    ๐Ÿ“š PubMed
genus Lactobacillus (NCBI:1578 ) High Distribution    ๐Ÿ“š PubMed
genus Lactobacillus (NCBI:1578 ) High Distribution    ๐Ÿ“š PubMed
genus Megamonas (NCBI:158846 ) High Distribution    ๐Ÿ“š PubMed
genus Methanobrevibacter (NCBI:2172 ) High Distribution    ๐Ÿ“š PubMed
genus Methanobrevibacter (NCBI:2172 ) Low Distribution    ๐Ÿ“š PubMed
genus Methanosphaera (NCBI:2316 ) High Distribution    ๐Ÿ“š PubMed
genus Odoribacter (NCBI:283168 ) Low Distribution    ๐Ÿ“š PubMed
genus Oribacterium (NCBI:265975 ) Low Distribution    ๐Ÿ“š PubMed
genus Oscillibacter (NCBI:459786 ) High Distribution    ๐Ÿ“š PubMed
genus Oscillospira (NCBI:119852 ) Low Distribution    ๐Ÿ“š PubMed
genus Oscillospira (NCBI:119852 ) Low Distribution    ๐Ÿ“š PubMed
genus Paenibacillus (NCBI:44249 ) Low Distribution    ๐Ÿ“š PubMed
genus Pantoea (NCBI:53335 ) High Distribution    ๐Ÿ“š PubMed
genus Parabacteroides (NCBI:375288 ) High Distribution    ๐Ÿ“š PubMed
genus Parabacteroides (NCBI:375288 ) Low Distribution    ๐Ÿ“š PubMed
genus Paraprevotella (NCBI:577309 ) High Distribution    ๐Ÿ“š PubMed
genus Parasutterella (NCBI:577310 ) High Distribution    ๐Ÿ“š PubMed
genus Parvimonas (NCBI:543311 ) High Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) High Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) High Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) Low Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) Low Distribution    ๐Ÿ“š PubMed
genus Propionibacterium (NCBI:1743 ) High Distribution    ๐Ÿ“š PubMed
genus Romboutsia (NCBI:1501226 ) High Distribution    ๐Ÿ“š PubMed
genus Roseburia (NCBI:841 ) High Distribution    ๐Ÿ“š PubMed
genus Ruminiclostridium (NCBI:1508657 ) Low Distribution    ๐Ÿ“š PubMed
genus Ruminococcus (NCBI:1263 ) High Distribution    ๐Ÿ“š PubMed
genus Ruminococcus (NCBI:1263 ) Low Distribution    ๐Ÿ“š PubMed
genus Shigella (NCBI:620 ) High Distribution    ๐Ÿ“š PubMed
genus Slackia (NCBI:84108 ) High Distribution    ๐Ÿ“š PubMed
genus Staphylococcus (NCBI:1279 ) High Distribution    ๐Ÿ“š PubMed
genus Staphylococcus (NCBI:1279 ) Low Distribution    ๐Ÿ“š PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    ๐Ÿ“š PubMed
genus Subdoligranulum (NCBI:292632 ) High Distribution    ๐Ÿ“š PubMed
genus Subdoligranulum (NCBI:292632 ) Low Distribution    ๐Ÿ“š PubMed
genus Succinatimonas (NCBI:674963 ) High Distribution    ๐Ÿ“š PubMed
genus Succinatimonas (NCBI:674963 ) Low Distribution    ๐Ÿ“š PubMed
genus Sutterella (NCBI:40544 ) High Distribution    ๐Ÿ“š PubMed
order Desulfovibrionales (NCBI:213115 ) Low Distribution    ๐Ÿ“š PubMed
order Eubacteriales (NCBI:186802 ) Low Distribution    ๐Ÿ“š PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    ๐Ÿ“š PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    ๐Ÿ“š PubMed
phylum Fibrobacteres (NCBI:65842 ) High Distribution    ๐Ÿ“š PubMed
phylum Fibrobacteres (NCBI:65842 ) Low Distribution    ๐Ÿ“š PubMed
phylum Firmicutes (NCBI:1239 ) High Distribution    ๐Ÿ“š PubMed
phylum Firmicutes (NCBI:1239 ) High Distribution    ๐Ÿ“š PubMed
phylum Firmicutes (NCBI:1239 ) Low Distribution    ๐Ÿ“š PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    ๐Ÿ“š PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    ๐Ÿ“š PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    ๐Ÿ“š PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    ๐Ÿ“š PubMed
phylum Synergistetes (NCBI:508458 ) High Distribution    ๐Ÿ“š PubMed
phylum Synergistetes (NCBI:508458 ) High Distribution    ๐Ÿ“š PubMed
phylum Tenericutes (NCBI:544448 ) Low Distribution    ๐Ÿ“š PubMed
phylum Verrucomicrobia (NCBI:74201 ) Low Distribution    ๐Ÿ“š PubMed
species [Ruminococcus] torques (NCBI:33039 ) High Distribution    ๐Ÿ“š PubMed
species Actinobaculum massiliense (NCBI:202789 ) Low Distribution    ๐Ÿ“š PubMed
species Actinomyces graevenitzii (NCBI:55565 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia sp. (NCBI:1872421 ) Low Distribution    ๐Ÿ“š PubMed
species Alistipes inops (NCBI:1501391 ) High Distribution    ๐Ÿ“š PubMed
species Alistipes obesi (NCBI:1118061 ) Low Distribution    ๐Ÿ“š PubMed
species Bacillus sp. (NCBI:1409 ) Low Distribution    ๐Ÿ“š PubMed
species Bacteroides caccae (NCBI:47678 ) High Distribution    ๐Ÿ“š PubMed
species Bacteroides sp. (NCBI:29523 ) Low Distribution    ๐Ÿ“š PubMed
species Bifidobacterium animalis (NCBI:28025 ) Low Distribution    ๐Ÿ“š PubMed
species Blautia wexlerae (NCBI:418240 ) High Distribution    ๐Ÿ“š PubMed
species CBS 316 (NCBI:5537 ) Low Distribution    ๐Ÿ“š PubMed
species Clostridium sp. (NCBI:1506 ) High Distribution    ๐Ÿ“š PubMed
species Clostridium sp. CAG:58 (NCBI:1262824 ) High Distribution    ๐Ÿ“š PubMed
species Collinsella aerofaciens (NCBI:74426 ) High Distribution    ๐Ÿ“š PubMed
species Dorea formicigenerans (NCBI:39486 ) High Distribution    ๐Ÿ“š PubMed
species Eubacterium sp. (NCBI:142586 ) Low Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) High Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    ๐Ÿ“š PubMed
species Faecalibacterium sp. (NCBI:1971605 ) Low Distribution    ๐Ÿ“š PubMed
species Firmicutes bacterium CAG:94 (NCBI:1262989 ) High Distribution    ๐Ÿ“š PubMed
species Flavonifractor plautii (NCBI:292800 ) High Distribution    ๐Ÿ“š PubMed
species Fusobacterium sp. (NCBI:68766 ) Low Distribution    ๐Ÿ“š PubMed
species Haemophilus parainfluenzae (NCBI:729 ) Low Distribution    ๐Ÿ“š PubMed
species Klebsiella pneumoniae (NCBI:573 ) High Distribution    ๐Ÿ“š PubMed
species Klebsiella pneumoniae (NCBI:573 ) Low Distribution    ๐Ÿ“š PubMed
species Lacticaseibacillus paracasei (NCBI:1597 ) Low Distribution    ๐Ÿ“š PubMed
species Lactiplantibacillus plantarum (NCBI:1590 ) Low Distribution    ๐Ÿ“š PubMed
species Latilactobacillus sakei (NCBI:1599 ) Low Distribution    ๐Ÿ“š PubMed
species Lawsonibacter asaccharolyticus (NCBI:2108523 ) High Distribution    ๐Ÿ“š PubMed
species Limosilactobacillus reuteri (NCBI:1598 ) High Distribution    ๐Ÿ“š PubMed
species Methanobrevibacter smithii (NCBI:2173 ) Low Distribution    ๐Ÿ“š PubMed
species Methanobrevibacter smithii (NCBI:2173 ) Low Distribution    ๐Ÿ“š PubMed
species Odoribacter splanchnicus (NCBI:28118 ) High Distribution    ๐Ÿ“š PubMed
species Oscillibacter sp. (NCBI:1945593 ) Low Distribution    ๐Ÿ“š PubMed
species Peptostreptococcus sp. (NCBI:1262 ) Low Distribution    ๐Ÿ“š PubMed
species Phocaeicola dorei (NCBI:357276 ) High Distribution    ๐Ÿ“š PubMed
species Prevotella bivia (NCBI:28125 ) Low Distribution    ๐Ÿ“š PubMed
species Prevotella corporis (NCBI:28128 ) High Distribution    ๐Ÿ“š PubMed
species Roseburia hominis (NCBI:301301 ) High Distribution    ๐Ÿ“š PubMed
species Rothia dentocariosa (NCBI:2047 ) Low Distribution    ๐Ÿ“š PubMed
species Ruminococcus gnavus (NCBI:33038 ) High Distribution    ๐Ÿ“š PubMed
species Ruminococcus gnavus (NCBI:33038 ) High Distribution    ๐Ÿ“š PubMed
species Ruminococcus sp. (NCBI:41978 ) Low Distribution    ๐Ÿ“š PubMed
species Streptococcus salivarius (NCBI:1304 ) Low Distribution    ๐Ÿ“š PubMed
species Sutterella sp. (NCBI:1981025 ) High Distribution    ๐Ÿ“š PubMed
species Turicibacter sanguinis (NCBI:154288 ) Low Distribution    ๐Ÿ“š PubMed
species Veillonella rogosae (NCBI:423477 ) High Distribution    ๐Ÿ“š PubMed
subspecies Bifidobacterium animalis subsp. lactis (NCBI:302911 ) Low Distribution    ๐Ÿ“š PubMed

All suggestions are computed solely on their predicted microbiome impact. Safety, side-effects etc must be evaluated by your medical professionals before starting. Some items suggests have significant risk of adverse consequences for some people.

Special thanks to David F Morrison and Geert Van Houcke for doing Quality Assurance. Special thanks to Oliver Luk, B.Sc. (Biology) from BiomeSight for spot checking the coding of data from the US National Library of Medicine

This is an Academic site. It generates theoretical models of what may benefit a specific microbiome results.

Copyright 2016-2023 Lassesen Consulting, LLC [2007], DBA, Microbiome Prescription. All rights served.
Permission to data scrap or reverse engineer is explicitly denied to all users. U.S. Code Title 18 PART I CHAPTER 47 ยงโ€ฏ1030, CETS No.185, CFAA
Use of data on this site is prohibited except under written license. There is no charge for individual personal use. Use for any commercial applications or research requires a written license.
Caveat emptor: Analysis and suggestions are based on modelling (and thus infererence) based on studies. The data sources are usually given for those that wish to consider alternative inferences. theories and models.

Microbiome Prescription do not make any representations that data or analyses available on this site is suitable for human diagnostic purposes, for informing treatment decisions, or for any other purposes and accept no responsibility or liability whatsoever for such use.
This site is not Health Insurance Portability and Accountability Act of 1996 (HIPAA) compliant.


The awesome web hosting site that we use. Try it if you need to host (or unhappy with current provider)