National Library of Medicine Citations for rheumatoid arthritis (RA),Spondyloarthritis (SpA)

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

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A percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary values.

Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetia (NCBI:1760 ) High Distribution    📚 PubMed
class Actinomycetia (NCBI:1760 ) High Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) High Distribution    📚 PubMed
class Verrucomicrobiae (NCBI:203494 ) High Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) High Distribution    📚 PubMed
family Clostridiaceae (NCBI:31979 ) Low Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    📚 PubMed
family Enterococcaceae (NCBI:81852 ) Low Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) High Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) High Distribution    📚 PubMed
family Lactobacillaceae (NCBI:33958 ) Low Distribution    📚 PubMed
family Oscillospiraceae (NCBI:216572 ) High Distribution    📚 PubMed
family Peptostreptococcaceae (NCBI:186804 ) Low Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) High Distribution    📚 PubMed
family Streptococcaceae (NCBI:1300 ) Low Distribution    📚 PubMed
family Veillonellaceae (NCBI:31977 ) High Distribution    📚 PubMed
genus Acidaminococcus (NCBI:904 ) Low Distribution    📚 PubMed
genus Actinomyces (NCBI:1654 ) High Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) High Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) Low Distribution    📚 PubMed
genus Alloprevotella (NCBI:1283313 ) Low Distribution    📚 PubMed
genus Alloprevotella (NCBI:1283313 ) Low Distribution    📚 PubMed
genus Atopobium (NCBI:1380 ) Low Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    📚 PubMed
genus Bilophila (NCBI:35832 ) High Distribution    📚 PubMed
genus Bilophila (NCBI:35832 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Butyricicoccus (NCBI:580596 ) High Distribution    📚 PubMed
genus Citrobacter (NCBI:544 ) High Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) High Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) Low Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High Distribution    📚 PubMed
genus Dorea (NCBI:189330 ) High Distribution    📚 PubMed
genus Dorea (NCBI:189330 ) Low Distribution    📚 PubMed
genus Eggerthella (NCBI:84111 ) High Distribution    📚 PubMed
genus Enterobacter (NCBI:547 ) High Distribution    📚 PubMed
genus Enterobacter (NCBI:547 ) Low Distribution    📚 PubMed
genus Enterobacter (NCBI:547 ) Low Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Flavobacterium (NCBI:237 ) Low Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) Low Distribution    📚 PubMed
genus Gemella (NCBI:1378 ) Low Distribution    📚 PubMed
genus Gordonibacter (NCBI:644652 ) High Distribution    📚 PubMed
genus Gordonibacter (NCBI:644652 ) High Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) Low Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High Distribution    📚 PubMed
genus Lachnoclostridium (NCBI:1506553 ) Low Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Lactococcus (NCBI:1357 ) Low Distribution    📚 PubMed
genus Megamonas (NCBI:158846 ) High Distribution    📚 PubMed
genus Megamonas (NCBI:158846 ) Low Distribution    📚 PubMed
genus Megamonas (NCBI:158846 ) Low Distribution    📚 PubMed
genus Methanobrevibacter (NCBI:2172 ) High Distribution    📚 PubMed
genus Mycobacterium (NCBI:1763 ) High Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low Distribution    📚 PubMed
genus Oribacterium (NCBI:265975 ) Low Distribution    📚 PubMed
genus Oscillibacter (NCBI:459786 ) High Distribution    📚 PubMed
genus Oxalobacter (NCBI:846 ) High Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High Distribution    📚 PubMed
genus Paraburkholderia (NCBI:1822464 ) Low Distribution    📚 PubMed
genus Parvimonas (NCBI:543311 ) High Distribution    📚 PubMed
genus Parvimonas (NCBI:543311 ) Low Distribution    📚 PubMed
genus Pelagibacterium (NCBI:1082930 ) High Distribution    📚 PubMed
genus Phascolarctobacterium (NCBI:33024 ) High Distribution    📚 PubMed
genus Phascolarctobacterium (NCBI:33024 ) Low Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Proteus (NCBI:583 ) High Distribution    📚 PubMed
genus Proteus (NCBI:583 ) High Distribution    📚 PubMed
genus Pseudobutyrivibrio (NCBI:46205 ) Low Distribution    📚 PubMed
genus Pseudomonas (NCBI:286 ) High Distribution    📚 PubMed
genus Pseudomonas (NCBI:286 ) Low Distribution    📚 PubMed
genus Pyramidobacter (NCBI:638847 ) High Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High Distribution    📚 PubMed
genus Slackia (NCBI:84108 ) High Distribution    📚 PubMed
genus Solobacterium (NCBI:123375 ) High Distribution    📚 PubMed
genus Staphylococcus (NCBI:1279 ) High Distribution    📚 PubMed
genus Staphylococcus (NCBI:1279 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) Low Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) Low Distribution    📚 PubMed
genus Turicibacter (NCBI:191303 ) High Distribution    📚 PubMed
genus Variovorax (NCBI:34072 ) Low Distribution    📚 PubMed
genus Veillonella (NCBI:29465 ) Low Distribution    📚 PubMed
norank Porphyromonas gingivalis ATCC 33277 (NCBI:431947 ) High Distribution    📚 PubMed
norank Porphyromonas gingivalis ATCC 33277 (NCBI:431947 ) High Distribution    📚 PubMed
order Eubacteriales (NCBI:186802 ) High Distribution    📚 PubMed
order Eubacteriales (NCBI:186802 ) High Distribution    📚 PubMed
order Flavobacteriales (NCBI:200644 ) High Distribution    📚 PubMed
order Lactobacillales (NCBI:186826 ) High Distribution    📚 PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    📚 PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    📚 PubMed
phylum Firmicutes (NCBI:1239 ) Low Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
phylum Verrucomicrobia (NCBI:74201 ) Low Distribution    📚 PubMed
species [Clostridium] leptum (NCBI:1535 ) Low Distribution    📚 PubMed
species Aggregatibacter actinomycetemcomitans (NCBI:714 ) High Distribution    📚 PubMed
species Asterococcus fermentans (Edward 1955) Prevot 1961 (NCBI:2115 ) High Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) Low Distribution    📚 PubMed
species Blautia coccoides (NCBI:1532 ) Low Distribution    📚 PubMed
species Clostridium tertium (NCBI:1559 ) High Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    📚 PubMed
species Gordonibacter pamelaeae (NCBI:471189 ) High Distribution    📚 PubMed
species Gordonibacter urolithinfaciens (NCBI:1335613 ) High Distribution    📚 PubMed
species Haemophilus paraphrohaemolyticus (NCBI:736 ) Low Distribution    📚 PubMed
species Haemophilus pittmaniae (NCBI:249188 ) Low Distribution    📚 PubMed
species Kytococcus sedentarius (NCBI:1276 ) High Distribution    📚 PubMed
species Lachnoanaerobaculum umeaense (NCBI:617123 ) Low Distribution    📚 PubMed
species Lactonifactor longoviformis (NCBI:341220 ) High Distribution    📚 PubMed
species Lancefieldella parvula (NCBI:1382 ) High Distribution    📚 PubMed
species Latilactobacillus curvatus (NCBI:28038 ) High Distribution    📚 PubMed
species Leuconostoc citreum (NCBI:33964 ) High Distribution    📚 PubMed
species Ligilactobacillus salivarius (NCBI:1624 ) High Distribution    📚 PubMed
species Ligilactobacillus salivarius (NCBI:1624 ) High Distribution    📚 PubMed
species Megamonas funiformis (NCBI:437897 ) Low Distribution    📚 PubMed
species Megamonas hypermegale (NCBI:158847 ) Low Distribution    📚 PubMed
species Megamonas rupellensis (NCBI:491921 ) Low Distribution    📚 PubMed
species Megamonas sp. (NCBI:2049033 ) Low Distribution    📚 PubMed
species Prevotella copri (NCBI:165179 ) High Distribution    📚 PubMed
species Prevotella copri (NCBI:165179 ) High Distribution    📚 PubMed
species Prevotella copri (NCBI:165179 ) High Distribution    📚 PubMed
species Prevotella copri (NCBI:165179 ) High Distribution    📚 PubMed
species Prevotella copri (NCBI:165179 ) High Distribution    📚 PubMed
species Prevotella copri (NCBI:165179 ) High Distribution    📚 PubMed
species Prevotella histicola (NCBI:470565 ) Low Distribution    📚 PubMed
species Ruminococcaceae bacterium D16 (NCBI:552398 ) Low Distribution    📚 PubMed
species Ruminococcus gauvreauii (NCBI:438033 ) High Distribution    📚 PubMed
species Ruminococcus gnavus (NCBI:33038 ) High Distribution    📚 PubMed
species Ruminococcus sp. (NCBI:41978 ) High Distribution    📚 PubMed
species Streptococcus australis (NCBI:113107 ) Low Distribution    📚 PubMed
species Streptococcus G418 (NCBI:1306 ) Low Distribution    📚 PubMed
species Sutterella wadsworthensis (NCBI:40545 ) Low Distribution    📚 PubMed
species Veillonella rogosae (NCBI:423477 ) Low Distribution    📚 PubMed
species Veillonella sp. (NCBI:1926307 ) High Distribution    📚 PubMed
species Veillonella tobetsuensis (NCBI:1110546 ) Low Distribution    📚 PubMed
species group Pseudomonas aeruginosa group (NCBI:136841 ) High Distribution    📚 PubMed
species group Stenotrophomonas maltophilia group (NCBI:995085 ) High Distribution    📚 PubMed

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