National Library of Medicine Citations for Systemic Lupus Erythematosus

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

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A percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary values.

Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetia (NCBI:1760 ) Low Distribution    📚 PubMed
class Bacilli (NCBI:91061 ) High Distribution    📚 PubMed
class Bacteroidia (NCBI:200643 ) Low Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) Low Distribution    📚 PubMed
class Gammaproteobacteria (NCBI:1236 ) High Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) High Distribution    📚 PubMed
family Catabacteriaceae (NCBI:424536 ) Low Distribution    📚 PubMed
family Clostridiaceae (NCBI:31979 ) High Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    📚 PubMed
family Enterococcaceae (NCBI:81852 ) High Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    📚 PubMed
family Lactobacillaceae (NCBI:33958 ) Low Distribution    📚 PubMed
family Porphyromonadaceae (NCBI:171551 ) High Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) High Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) Low Distribution    📚 PubMed
family Rikenellaceae (NCBI:171550 ) Low Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    📚 PubMed
genus Bilophila (NCBI:35832 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low Distribution    📚 PubMed
genus Campylobacter (NCBI:194 ) High Distribution    📚 PubMed
genus Campylobacter (NCBI:194 ) High Distribution    📚 PubMed
genus Coprobacter (NCBI:1348911 ) Low Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) High Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) Low Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) Low Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) Low Distribution    📚 PubMed
genus Eggerthella (NCBI:84111 ) High Distribution    📚 PubMed
genus Eggerthella (NCBI:84111 ) High Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) High Distribution    📚 PubMed
genus Ezakiella (NCBI:1582879 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Flavonifractor (NCBI:946234 ) High Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High Distribution    📚 PubMed
genus Gemmiger (NCBI:204475 ) Low Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High Distribution    📚 PubMed
genus Lachnospira (NCBI:28050 ) Low Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Megasphaera (NCBI:906 ) High Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) High Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low Distribution    📚 PubMed
genus Oribacterium (NCBI:265975 ) High Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High Distribution    📚 PubMed
genus Paraprevotella (NCBI:577309 ) Low Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low Distribution    📚 PubMed
genus Pseudobutyrivibrio (NCBI:46205 ) Low Distribution    📚 PubMed
genus Rhodococcus (NCBI:1827 ) High Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    📚 PubMed
genus Succinivibrio (NCBI:83770 ) High Distribution    📚 PubMed
genus Veillonella (NCBI:29465 ) High Distribution    📚 PubMed
genus Veillonella (NCBI:29465 ) High Distribution    📚 PubMed
order Enterobacterales (NCBI:91347 ) High Distribution    📚 PubMed
order Eubacteriales (NCBI:186802 ) Low Distribution    📚 PubMed
order Lactobacillales (NCBI:186826 ) High Distribution    📚 PubMed
phylum Actinobacteria (NCBI:201174 ) Low Distribution    📚 PubMed
phylum Bacteroidetes (NCBI:976 ) Low Distribution    📚 PubMed
phylum Cyanobacteria (NCBI:1117 ) Low Distribution    📚 PubMed
phylum Euryarchaeota (NCBI:28890 ) Low Distribution    📚 PubMed
phylum Firmicutes (NCBI:1239 ) Low Distribution    📚 PubMed
phylum Fusobacteria (NCBI:32066 ) Low Distribution    📚 PubMed
phylum Lentisphaerae (NCBI:256845 ) Low Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) Low Distribution    📚 PubMed
phylum Synergistetes (NCBI:508458 ) Low Distribution    📚 PubMed
phylum Tenericutes (NCBI:544448 ) Low Distribution    📚 PubMed
phylum Verrucomicrobia (NCBI:74201 ) Low Distribution    📚 PubMed
species Actinomyces massiliensis (NCBI:461393 ) High Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High Distribution    📚 PubMed
species Clostridium sp. (NCBI:1506 ) High Distribution    📚 PubMed
species Lancefieldella rimae (NCBI:1383 ) High Distribution    📚 PubMed
species Ruminococcus gnavus (NCBI:33038 ) High Distribution    📚 PubMed
species Shuttleworthia satelles (NCBI:177972 ) High Distribution    📚 PubMed

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