National Library of Medicine Citations for Type 2 Diabetes

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

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A percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary values.

Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetia (NCBI:1760 ) High Distribution    📚 PubMed
class Bacteroidia (NCBI:200643 ) High Distribution    📚 PubMed
class Bacteroidia (NCBI:200643 ) Low Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) Low Distribution    📚 PubMed
class Deltaproteobacteria (NCBI:28221 ) Low Distribution    📚 PubMed
class Gammaproteobacteria (NCBI:1236 ) High Distribution    📚 PubMed
family Bifidobacteriaceae (NCBI:31953 ) High Distribution    📚 PubMed
family Clostridiaceae (NCBI:31979 ) Low Distribution    📚 PubMed
family Clostridiaceae (NCBI:31979 ) Low Distribution    📚 PubMed
family Comamonadaceae (NCBI:80864 ) High Distribution    📚 PubMed
family Coriobacteriaceae (NCBI:84107 ) High Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    📚 PubMed
family Odoribacteraceae (NCBI:1853231 ) Low Distribution    📚 PubMed
family Peptostreptococcaceae (NCBI:186804 ) Low Distribution    📚 PubMed
family Peptostreptococcaceae (NCBI:186804 ) Low Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) High Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) High Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    📚 PubMed
family Veillonellaceae (NCBI:31977 ) High Distribution    📚 PubMed
genus Acidaminococcus (NCBI:904 ) High Distribution    📚 PubMed
genus Adlercreutzia (NCBI:447020 ) High Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) High Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) High Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) High Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) Low Distribution    📚 PubMed
genus Alloprevotella (NCBI:1283313 ) High Distribution    📚 PubMed
genus Anaerostipes (NCBI:207244 ) High Distribution    📚 PubMed
genus Anaerotruncus (NCBI:244127 ) High Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    📚 PubMed
genus Bilophila (NCBI:35832 ) High Distribution    📚 PubMed
genus Bilophila (NCBI:35832 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low Distribution    📚 PubMed
genus Butyricicoccus (NCBI:580596 ) High Distribution    📚 PubMed
genus Butyricicoccus (NCBI:580596 ) Low Distribution    📚 PubMed
genus Butyricimonas (NCBI:574697 ) High Distribution    📚 PubMed
genus Butyrivibrio (NCBI:830 ) High Distribution    📚 PubMed
genus Butyrivibrio (NCBI:830 ) Low Distribution    📚 PubMed
genus Butyrivibrio (NCBI:830 ) Low Distribution    📚 PubMed
genus Campylobacter (NCBI:194 ) High Distribution    📚 PubMed
genus Catenibacterium (NCBI:135858 ) High Distribution    📚 PubMed
genus Catenibacterium (NCBI:135858 ) Low Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) High Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) High Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) High Distribution    📚 PubMed
genus Coprobacillus (NCBI:100883 ) High Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) High Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) Low Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) Low Distribution    📚 PubMed
genus Dorea (NCBI:189330 ) High Distribution    📚 PubMed
genus Dorea (NCBI:189330 ) High Distribution    📚 PubMed
genus Dorea (NCBI:189330 ) Low Distribution    📚 PubMed
genus Eggerthella (NCBI:84111 ) High Distribution    📚 PubMed
genus Elusimicrobium (NCBI:423604 ) Low Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) High Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    📚 PubMed
genus Finegoldia (NCBI:150022 ) Low Distribution    📚 PubMed
genus Flavonifractor (NCBI:946234 ) High Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) Low Distribution    📚 PubMed
genus Gemella (NCBI:1378 ) High Distribution    📚 PubMed
genus Gemella (NCBI:1378 ) Low Distribution    📚 PubMed
genus Gordonibacter (NCBI:644652 ) High Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) Low Distribution    📚 PubMed
genus Holdemania (NCBI:61170 ) High Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low Distribution    📚 PubMed
genus Lactococcus (NCBI:1357 ) High Distribution    📚 PubMed
genus Leuconostoc (NCBI:1243 ) Low Distribution    📚 PubMed
genus Megamonas (NCBI:158846 ) High Distribution    📚 PubMed
genus Megamonas (NCBI:158846 ) Low Distribution    📚 PubMed
genus Megasphaera (NCBI:906 ) High Distribution    📚 PubMed
genus Megasphaera (NCBI:906 ) High Distribution    📚 PubMed
genus Megasphaera (NCBI:906 ) High Distribution    📚 PubMed
genus Methanobrevibacter (NCBI:2172 ) High Distribution    📚 PubMed
genus Methanobrevibacter (NCBI:2172 ) Low Distribution    📚 PubMed
genus Methanosphaera (NCBI:2316 ) High Distribution    📚 PubMed
genus Methanosphaera (NCBI:2316 ) Low Distribution    📚 PubMed
genus Mitsuokella (NCBI:52225 ) High Distribution    📚 PubMed
genus Morganella (NCBI:581 ) High Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) High Distribution    📚 PubMed
genus Oribacterium (NCBI:265975 ) Low Distribution    📚 PubMed
genus Oscillospira (NCBI:119852 ) High Distribution    📚 PubMed
genus Oxalobacter (NCBI:846 ) High Distribution    📚 PubMed
genus Paenibacillus (NCBI:44249 ) Low Distribution    📚 PubMed
genus Pantoea (NCBI:53335 ) High Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) Low Distribution    📚 PubMed
genus Paraprevotella (NCBI:577309 ) Low Distribution    📚 PubMed
genus Paraprevotella (NCBI:577309 ) Low Distribution    📚 PubMed
genus Parasutterella (NCBI:577310 ) Low Distribution    📚 PubMed
genus Parvimonas (NCBI:543311 ) Low Distribution    📚 PubMed
genus Peptoniphilus (NCBI:162289 ) High Distribution    📚 PubMed
genus Peptoniphilus (NCBI:162289 ) Low Distribution    📚 PubMed
genus Phascolarctobacterium (NCBI:33024 ) High Distribution    📚 PubMed
genus Phascolarctobacterium (NCBI:33024 ) Low Distribution    📚 PubMed
genus Phocea (NCBI:1926663 ) High Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low Distribution    📚 PubMed
genus Propionibacterium (NCBI:1743 ) Low Distribution    📚 PubMed
genus Pseudoflavonifractor (NCBI:1017280 ) High Distribution    📚 PubMed
genus Pyramidobacter (NCBI:638847 ) High Distribution    📚 PubMed
genus Rhodococcus (NCBI:1661425 ) High Distribution    📚 PubMed
genus Rhodococcus (NCBI:1827 ) High Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) High Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High Distribution    📚 PubMed
genus Slackia (NCBI:84108 ) High Distribution    📚 PubMed
genus Slackia (NCBI:84108 ) Low Distribution    📚 PubMed
genus Staphylococcus (NCBI:1279 ) High Distribution    📚 PubMed
genus Staphylococcus (NCBI:1279 ) Low Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) Low Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) Low Distribution    📚 PubMed
genus Subdoligranulum (NCBI:292632 ) High Distribution    📚 PubMed
genus Subdoligranulum (NCBI:292632 ) High Distribution    📚 PubMed
genus Subdoligranulum (NCBI:292632 ) Low Distribution    📚 PubMed
genus Succinatimonas (NCBI:674963 ) High Distribution    📚 PubMed
genus Succinatimonas (NCBI:674963 ) Low Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) High Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) High Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) Low Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) Low Distribution    📚 PubMed
genus Turicibacter (NCBI:191303 ) Low Distribution    📚 PubMed
genus Vibrio (NCBI:662 ) High Distribution    📚 PubMed
genus Weissella (NCBI:46255 ) High Distribution    📚 PubMed
order Eubacteriales (NCBI:186802 ) High Distribution    📚 PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    📚 PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    📚 PubMed
phylum Bacteroidetes (NCBI:976 ) Low Distribution    📚 PubMed
phylum Euryarchaeota (NCBI:28890 ) High Distribution    📚 PubMed
phylum Fibrobacteres (NCBI:65842 ) High Distribution    📚 PubMed
phylum Fibrobacteres (NCBI:65842 ) Low Distribution    📚 PubMed
phylum Firmicutes (NCBI:1239 ) High Distribution    📚 PubMed
phylum Firmicutes (NCBI:1239 ) High Distribution    📚 PubMed
phylum Firmicutes (NCBI:1239 ) High Distribution    📚 PubMed
phylum Firmicutes (NCBI:1239 ) Low Distribution    📚 PubMed
phylum Firmicutes (NCBI:1239 ) Low Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    📚 PubMed
phylum Proteobacteria (NCBI:1224 ) Low Distribution    📚 PubMed
phylum Synergistetes (NCBI:508458 ) High Distribution    📚 PubMed
phylum Tenericutes (NCBI:544448 ) High Distribution    📚 PubMed
phylum Verrucomicrobia (NCBI:74201 ) High Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    📚 PubMed
species Bacteroides caccae (NCBI:47678 ) High Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) Low Distribution    📚 PubMed
species Bacteroides intestinalis (NCBI:329854 ) High Distribution    📚 PubMed
species Bacteroides stercoris (NCBI:46506 ) High Distribution    📚 PubMed
species Bacteroides thetaiotaomicron (NCBI:818 ) Low Distribution    📚 PubMed
species Bacteroides uniformis (NCBI:820 ) Low Distribution    📚 PubMed
species Bifidobacterium animalis (NCBI:28025 ) Low Distribution    📚 PubMed
species Bifidobacterium bifidum (NCBI:1681 ) High Distribution    📚 PubMed
species Bifidobacterium pseudolongum (NCBI:1694 ) Low Distribution    📚 PubMed
species Clostridium butyricum (NCBI:1492 ) Low Distribution    📚 PubMed
species Collinsella aerofaciens (NCBI:74426 ) High Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) Low Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    📚 PubMed
species Klebsiella pneumoniae (NCBI:573 ) High Distribution    📚 PubMed
species Lactobacillus intestinalis (NCBI:151781 ) High Distribution    📚 PubMed
species Ligilactobacillus ruminis (NCBI:1623 ) High Distribution    📚 PubMed
species Phascolarctobacterium faecium (NCBI:33025 ) Low Distribution    📚 PubMed
species Phocaeicola vulgatus (NCBI:821 ) High Distribution    📚 PubMed
species Phocaeicola vulgatus (NCBI:821 ) Low Distribution    📚 PubMed
species Ruminococcus gnavus (NCBI:33038 ) High Distribution    📚 PubMed
strain Anaerobutyricum hallii DSM 3353 (NCBI:411469 ) Low Distribution    📚 PubMed
strain Clostridium beijerinckii NCIMB 8052 (NCBI:290402 ) Low Distribution    📚 PubMed
strain Clostridium beijerinckii NRRL B-598 (NCBI:1428454 ) Low Distribution    📚 PubMed
subspecies Bifidobacterium longum subsp. infantis (NCBI:1682 ) Low Distribution    📚 PubMed

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