National Library of Medicine Citations for Ulcerative colitis

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

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Note these are associations and not causation. Items being high or low may be part of the immune response.

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A percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary values.

Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetia (NCBI:1760 ) High Distribution    ๐Ÿ“š PubMed
class Actinomycetia (NCBI:1760 ) High Distribution    ๐Ÿ“š PubMed
class Bacilli (NCBI:91061 ) High Distribution    ๐Ÿ“š PubMed
class Bacilli (NCBI:91061 ) High Distribution    ๐Ÿ“š PubMed
class Bacteroidia (NCBI:200643 ) High Distribution    ๐Ÿ“š PubMed
class Bacteroidia (NCBI:200643 ) Low Distribution    ๐Ÿ“š PubMed
class Bacteroidia (NCBI:200643 ) Low Distribution    ๐Ÿ“š PubMed
class Clostridia (NCBI:186801 ) Low Distribution    ๐Ÿ“š PubMed
class Clostridia (NCBI:186801 ) Low Distribution    ๐Ÿ“š PubMed
class Coriobacteriia (NCBI:84998 ) Low Distribution    ๐Ÿ“š PubMed
class Gammaproteobacteria (NCBI:1236 ) High Distribution    ๐Ÿ“š PubMed
class Gammaproteobacteria (NCBI:1236 ) High Distribution    ๐Ÿ“š PubMed
class Negativicutes (NCBI:909932 ) Low Distribution    ๐Ÿ“š PubMed
family Bacteroidaceae (NCBI:815 ) Low Distribution    ๐Ÿ“š PubMed
family Bifidobacteriaceae (NCBI:31953 ) High Distribution    ๐Ÿ“š PubMed
family Christensenellaceae (NCBI:990719 ) Low Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    ๐Ÿ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High Distribution    ๐Ÿ“š PubMed
family Enterococcaceae (NCBI:81852 ) High Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low Distribution    ๐Ÿ“š PubMed
family Lactobacillaceae (NCBI:33958 ) High Distribution    ๐Ÿ“š PubMed
family Muribaculaceae (NCBI:2005473 ) High Distribution    ๐Ÿ“š PubMed
family Prevotellaceae (NCBI:171552 ) Low Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) High Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    ๐Ÿ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low Distribution    ๐Ÿ“š PubMed
genus Acinetobacter (NCBI:469 ) High Distribution    ๐Ÿ“š PubMed
genus Actinomyces (NCBI:1654 ) High Distribution    ๐Ÿ“š PubMed
genus Adlercreutzia (NCBI:447020 ) Low Distribution    ๐Ÿ“š PubMed
genus Aeromonas (NCBI:642 ) High Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Akkermansia (NCBI:239934 ) Low Distribution    ๐Ÿ“š PubMed
genus Anaerofilum (NCBI:52784 ) High Distribution    ๐Ÿ“š PubMed
genus Anaerostipes (NCBI:207244 ) High Distribution    ๐Ÿ“š PubMed
genus Anaerotruncus (NCBI:244127 ) High Distribution    ๐Ÿ“š PubMed
genus Atopobium (NCBI:1380 ) High Distribution    ๐Ÿ“š PubMed
genus Bacillus (NCBI:1386 ) High Distribution    ๐Ÿ“š PubMed
genus Bacillus (NCBI:55087 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) High Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    ๐Ÿ“š PubMed
genus Bacteroides (NCBI:816 ) Low Distribution    ๐Ÿ“š PubMed
genus Bifidobacterium (NCBI:1678 ) High Distribution    ๐Ÿ“š PubMed
genus Bifidobacterium (NCBI:1678 ) Low Distribution    ๐Ÿ“š PubMed
genus Bilophila (NCBI:35832 ) Low Distribution    ๐Ÿ“š PubMed
genus Blautia (NCBI:572511 ) High Distribution    ๐Ÿ“š PubMed
genus Butyricicoccus (NCBI:580596 ) Low Distribution    ๐Ÿ“š PubMed
genus Butyrivibrio (NCBI:830 ) Low Distribution    ๐Ÿ“š PubMed
genus Catenibacterium (NCBI:135858 ) Low Distribution    ๐Ÿ“š PubMed
genus Cetobacterium (NCBI:180162 ) High Distribution    ๐Ÿ“š PubMed
genus Citrobacter (NCBI:544 ) High Distribution    ๐Ÿ“š PubMed
genus Citrobacter (NCBI:544 ) Low Distribution    ๐Ÿ“š PubMed
genus Clostridium (NCBI:1485 ) High Distribution    ๐Ÿ“š PubMed
genus Clostridium (NCBI:1485 ) Low Distribution    ๐Ÿ“š PubMed
genus Clostridium (NCBI:1485 ) Low Distribution    ๐Ÿ“š PubMed
genus Clostridium (NCBI:1485 ) Low Distribution    ๐Ÿ“š PubMed
genus Coprobacillus (NCBI:100883 ) High Distribution    ๐Ÿ“š PubMed
genus Coprococcus (NCBI:33042 ) Low Distribution    ๐Ÿ“š PubMed
genus Corynebacterium (NCBI:1716 ) High Distribution    ๐Ÿ“š PubMed
genus Corynebacterium (NCBI:1716 ) Low Distribution    ๐Ÿ“š PubMed
genus Dehalobacterium (NCBI:51514 ) Low Distribution    ๐Ÿ“š PubMed
genus Desulfovibrio (NCBI:872 ) Low Distribution    ๐Ÿ“š PubMed
genus Dialister (NCBI:39948 ) Low Distribution    ๐Ÿ“š PubMed
genus Dorea (NCBI:189330 ) High Distribution    ๐Ÿ“š PubMed
genus Enterobacter (NCBI:547 ) Low Distribution    ๐Ÿ“š PubMed
genus Enterococcus (NCBI:1350 ) High Distribution    ๐Ÿ“š PubMed
genus Enterococcus (NCBI:1350 ) High Distribution    ๐Ÿ“š PubMed
genus Enterococcus (NCBI:1350 ) High Distribution    ๐Ÿ“š PubMed
genus Enterococcus (NCBI:1350 ) High Distribution    ๐Ÿ“š PubMed
genus Enterococcus (NCBI:1350 ) Low Distribution    ๐Ÿ“š PubMed
genus Escherichia (NCBI:561 ) High Distribution    ๐Ÿ“š PubMed
genus Escherichia (NCBI:561 ) High Distribution    ๐Ÿ“š PubMed
genus Escherichia (NCBI:561 ) High Distribution    ๐Ÿ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low Distribution    ๐Ÿ“š PubMed
genus Finegoldia (NCBI:150022 ) High Distribution    ๐Ÿ“š PubMed
genus Gemella (NCBI:1378 ) High Distribution    ๐Ÿ“š PubMed
genus Granulicatella (NCBI:117563 ) High Distribution    ๐Ÿ“š PubMed
genus Klebsiella (NCBI:570 ) High Distribution    ๐Ÿ“š PubMed
genus Lactobacillus (NCBI:1578 ) High Distribution    ๐Ÿ“š PubMed
genus Lactobacillus (NCBI:1578 ) High Distribution    ๐Ÿ“š PubMed
genus Lactococcus (NCBI:1357 ) High Distribution    ๐Ÿ“š PubMed
genus Leuconostoc (NCBI:1243 ) High Distribution    ๐Ÿ“š PubMed
genus Megamonas (NCBI:158846 ) Low Distribution    ๐Ÿ“š PubMed
genus Methanobrevibacter (NCBI:2172 ) High Distribution    ๐Ÿ“š PubMed
genus Methanobrevibacter (NCBI:2172 ) Low Distribution    ๐Ÿ“š PubMed
genus Morganella (NCBI:581 ) High Distribution    ๐Ÿ“š PubMed
genus Neisseria (NCBI:482 ) High Distribution    ๐Ÿ“š PubMed
genus Odoribacter (NCBI:283168 ) Low Distribution    ๐Ÿ“š PubMed
genus Odoribacter (NCBI:283168 ) Low Distribution    ๐Ÿ“š PubMed
genus Oribacterium (NCBI:265975 ) High Distribution    ๐Ÿ“š PubMed
genus Oscillibacter (NCBI:459786 ) High Distribution    ๐Ÿ“š PubMed
genus Parabacteroides (NCBI:375288 ) Low Distribution    ๐Ÿ“š PubMed
genus Parabacteroides (NCBI:375288 ) Low Distribution    ๐Ÿ“š PubMed
genus Parvimonas (NCBI:543311 ) Low Distribution    ๐Ÿ“š PubMed
genus Peptoniphilus (NCBI:162289 ) High Distribution    ๐Ÿ“š PubMed
genus Peptostreptococcus (NCBI:1257 ) High Distribution    ๐Ÿ“š PubMed
genus Phascolarctobacterium (NCBI:33024 ) Low Distribution    ๐Ÿ“š PubMed
genus Porphyromonas (NCBI:836 ) High Distribution    ๐Ÿ“š PubMed
genus Prevotella (NCBI:838 ) High Distribution    ๐Ÿ“š PubMed
genus Pseudomonas (NCBI:286 ) Low Distribution    ๐Ÿ“š PubMed
genus Roseburia (NCBI:841 ) Low Distribution    ๐Ÿ“š PubMed
genus Rothia (NCBI:32207 ) High Distribution    ๐Ÿ“š PubMed
genus Rothia (NCBI:508215 ) High Distribution    ๐Ÿ“š PubMed
genus Shigella (NCBI:620 ) High Distribution    ๐Ÿ“š PubMed
genus Shigella (NCBI:620 ) High Distribution    ๐Ÿ“š PubMed
genus Shigella (NCBI:620 ) High Distribution    ๐Ÿ“š PubMed
genus Solobacterium (NCBI:123375 ) High Distribution    ๐Ÿ“š PubMed
genus Staphylococcus (NCBI:1279 ) High Distribution    ๐Ÿ“š PubMed
genus Streptococcus (NCBI:1301 ) High Distribution    ๐Ÿ“š PubMed
genus Subdoligranulum (NCBI:292632 ) High Distribution    ๐Ÿ“š PubMed
genus Weissella (NCBI:46255 ) High Distribution    ๐Ÿ“š PubMed
order Bacteroidales (NCBI:171549 ) Low Distribution    ๐Ÿ“š PubMed
order Bifidobacteriales (NCBI:85004 ) High Distribution    ๐Ÿ“š PubMed
order Coriobacteriales (NCBI:84999 ) High Distribution    ๐Ÿ“š PubMed
order Enterobacterales (NCBI:91347 ) High Distribution    ๐Ÿ“š PubMed
order Enterobacterales (NCBI:91347 ) High Distribution    ๐Ÿ“š PubMed
order Eubacteriales (NCBI:186802 ) Low Distribution    ๐Ÿ“š PubMed
order Lactobacillales (NCBI:186826 ) High Distribution    ๐Ÿ“š PubMed
order Lactobacillales (NCBI:186826 ) High Distribution    ๐Ÿ“š PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    ๐Ÿ“š PubMed
phylum Actinobacteria (NCBI:201174 ) High Distribution    ๐Ÿ“š PubMed
phylum Bacteroidetes (NCBI:976 ) Low Distribution    ๐Ÿ“š PubMed
phylum Bacteroidetes (NCBI:976 ) Low Distribution    ๐Ÿ“š PubMed
phylum Firmicutes (NCBI:1239 ) High Distribution    ๐Ÿ“š PubMed
phylum Firmicutes (NCBI:1239 ) Low Distribution    ๐Ÿ“š PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    ๐Ÿ“š PubMed
phylum Proteobacteria (NCBI:1224 ) High Distribution    ๐Ÿ“š PubMed
phylum Verrucomicrobia (NCBI:74201 ) Low Distribution    ๐Ÿ“š PubMed
species [Clostridium] innocuum (NCBI:1522 ) High Distribution    ๐Ÿ“š PubMed
species Adlercreutzia equolifaciens (NCBI:446660 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low Distribution    ๐Ÿ“š PubMed
species Bacteroides ovatus (NCBI:28116 ) Low Distribution    ๐Ÿ“š PubMed
species Bacteroides uniformis (NCBI:820 ) Low Distribution    ๐Ÿ“š PubMed
species Bifidobacterium bifidum (NCBI:1681 ) Low Distribution    ๐Ÿ“š PubMed
species Blautia producta (NCBI:33035 ) Low Distribution    ๐Ÿ“š PubMed
species Clostridium butyricum (NCBI:1492 ) Low Distribution    ๐Ÿ“š PubMed
species Clostridium butyricum (NCBI:1492 ) Low Distribution    ๐Ÿ“š PubMed
species Escherichia coli (NCBI:562 ) High Distribution    ๐Ÿ“š PubMed
species Escherichia coli (NCBI:562 ) High Distribution    ๐Ÿ“š PubMed
species Eubacterium ventriosum (NCBI:39496 ) Low Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    ๐Ÿ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low Distribution    ๐Ÿ“š PubMed
species Francisella tularensis (NCBI:263 ) High Distribution    ๐Ÿ“š PubMed
species Lactiplantibacillus plantarum (NCBI:1590 ) Low Distribution    ๐Ÿ“š PubMed
species Latilactobacillus sakei (NCBI:1599 ) Low Distribution    ๐Ÿ“š PubMed
species Mucispirillum schaedleri (NCBI:248039 ) High Distribution    ๐Ÿ“š PubMed
species Phocaeicola vulgatus (NCBI:821 ) Low Distribution    ๐Ÿ“š PubMed
species Prevotella copri (NCBI:165179 ) Low Distribution    ๐Ÿ“š PubMed

All suggestions are computed solely on their predicted microbiome impact. Safety, side-effects etc must be evaluated by your medical professionals before starting. Some items suggests have significant risk of adverse consequences for some people.

Special thanks to David F Morrison and Geert Van Houcke for doing Quality Assurance. Special thanks to Oliver Luk, B.Sc. (Biology) from BiomeSight for spot checking the coding of data from the US National Library of Medicine

This is an Academic site. It generates theoretical models of what may benefit a specific microbiome results.

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