Details about Oxalobacter: NCBI 846

Note: NCBI has updated names - we are standardizing on 'scientific name'

gram-negative or unknown

Other Names: Oxalobacter Oxalobacter Allison et al. 1985

Distribution Chart and Statistics    |    End Products Produced   |    ๐Ÿ“š PubMed Citations   |    205 Interactions with Other Bacteria

Medical Condition Associated

Based on the 71K samples on GMrepo : a curated database of human gut metagenomes as of Oct,2021


Adenoma  Alzheimer Disease  Anorexia  Arthritis, Reactive  Arthritis, Rheumatoid  Atherosclerosis  Attention Deficit Disorder with Hyperactivity  Autism Spectrum Disorder  Autistic Disorder  Autoimmune Diseases  Behcet Syndrome  Bipolar Disorder  Breast Neoplasms  Cardiovascular Diseases  Celiac Disease  Cholangitis, Sclerosing  Chronic Periodontitis  Clostridium Infections  Colitis, Ulcerative  Colonic Diseases  Colorectal Neoplasms  Constipation  Crohn Disease  Cystic Fibrosis  Depression  Diabetes Mellitus  Diabetes Mellitus, Type 1  Diabetes Mellitus, Type 2  Diabetes, Gestational  Diarrhea  Epilepsy  Gastroesophageal Reflux  Gingivitis  Graves Disease  Hashimoto Disease  Hematologic Neoplasms  Hepatitis B virus  HIV  HIV Infections  HIV-1  Hypertension  Infant, Low Birth Weight  Inflammatory Bowel Diseases  Intestinal Diseases  Irritable Bowel Syndrome  Kidney Diseases  Kidney Failure, Chronic  Liver Cirrhosis  Liver Diseases  Lung Diseases  Melanoma  Metabolic Syndrome  Migraine Disorders  Non-alcoholic Fatty Liver Disease  Obesity  Overweight  Parkinson Disease  Precursor Cell Lymphoblastic Leukemia-Lymphoma  Prediabetic State  Pregnant Women  Psoriasis  REM Sleep Behavior Disorder  Rett Syndrome  Rotavirus Infections  Severe Acute Malnutrition  Short Bowel Syndrome  Spondylarthritis  Spondylitis, Ankylosing  Stomach Neoplasms  Thyroid Diseases  Thyroid Neoplasms  Tuberculosis  Uveomeningoencephalitic Syndrome 


Recommended reading: Taxonomy Nightmare

Does a specific lab/source detect it?


Click on to see lab specific distribution
SourcePercentagesamples
es-xenogene 100 % 4
SequentiaBiotech 21.05 % 38
BiomeSightRdp 0 % 10
CosmosId 6.67 % 31
AmericanGut 44.44 % 18
custom 0 % 10
Microba 0 % 11
Medivere 66.67 % 8
uBiome 0 % 833
Thryve 29.49 % 773
BiomeSight 44.09 % 670

Desired Levels from Some Experts

Some sources used the IQR range (25%ile-75%ile) of healthy controls. This means that 50% of healthy controls will be out of range.

The KM ranges detect where abnormal ranges start

Percentage Seen in Sample
Low Boundary High Boundary Source
0.001 %0.171 % Kaltoft-Moltrup Normal Ranges

Ranges can vary from lab to lab because of different equipment and software being used.

A value of 50 means typical average value. Below 50, lower values, above 50 higher values

Determined from annotated data uploaded to this site for {taxname}
Z-ScoreSymptom NameTypical Value
7.7     Physical: Southern European    76
6.9     DePaul University Fatigue Questionnaire : Depression    78
5.8     Onset: less than 16 years since onset    73
5.1     DePaul University Fatigue Questionnaire : Sensitivity to Alcohol    76
4.6     DePaul University Fatigue Questionnaire : Difficulty finding the right word    71
4.5     Official Diagnosis: Depression    75
4.4     DePaul University Fatigue Questionnaire : Temperature lower than normal    77
4.2     Sleep: Unrefreshed sleep    65
4.2     DePaul University Fatigue Questionnaire : Anxiety/tension    71
4.2     DePaul University Fatigue Questionnaire : Muscle weakness    78
4.1     DePaul University Fatigue Questionnaire : Allergies    67
4.1     Physical: Northern European    65
4     DePaul University Fatigue Questionnaire : Does physical activity make you feel worse    73
3.8     Post-exertional malaise: Mentally tired after the slightest effort    67
3.7     Physical: Work-Sitting    67
3.4     DePaul University Fatigue Questionnaire : Slow to react    72
3.3     DePaul University Fatigue Questionnaire : Dizziness    72
3.3     DePaul University Fatigue Questionnaire : Easily irritated    68
3.3     General: Fatigue    62
3     Autonomic Manifestations: light-headedness    71
3     DePaul University Fatigue Questionnaire : Need to have to focus on one thing at a time    69
2.9     Autonomic Manifestations: Cortisol disorders or irregularity    28
2.9     Age: 50-60    65
2.8     Neurological: Word-finding problems    63
2.8     Pain: Aching of the eyes or behind the eyes    70
2.8     DePaul University Fatigue Questionnaire : Forgetting what you are trying to say    66
2.7     Neuroendocrine Manifestations: Muscle weakness    66
2.7     Post-exertional malaise: Inappropriate loss of physical and mental stamina,    63
2.7     DePaul University Fatigue Questionnaire : Hot or Cold spells    67
2.7     Neuroendocrine Manifestations: cold extremities    60
2.6     Neurocognitive: Can only focus on one thing at a time    60
2.6     Physical: Appendix removed    77
2.6     DePaul University Fatigue Questionnaire : Trouble expressing thoughts    71
2.6     Post-exertional malaise: Rapid cognitive fatigability,    63

I would like to know about this bacteria's

From Published Science

Based on Studies on PubMed
Medical ConditionDirectionPValue
Type 2 Diabetes High ๐Ÿ“š 1 citations
Atherosclerosis Low ๐Ÿ“š 1 citations
Irritable Bowel Syndrome Low ๐Ÿ“š 1 citations
Liver Cirrhosis High ๐Ÿ“š 1 citations
Liver Cirrhosis Low ๐Ÿ“š 1 citations
rheumatoid arthritis (RA),Spondyloarthritis (SpA) High ๐Ÿ“š 1 citations
Ankylosing spondylitis Low ๐Ÿ“š 1 citations

I would like to know what can change the quality that I have

You can compare microbiome impact of these by checking the desired items (try keeping the numbers below six(6) and clicking

๐Ÿ““ - direct citation | ๐Ÿ‘ช - Impacts Parent Taxa | ๐Ÿ‘ถ - Impacts Child Taxa | ๐Ÿง™ - Inferred
Search Hints:
General Substance Specific Substance Effect
Amino Acid and similar choline deficiency ๐Ÿ“š 1 studies report Increases
Amino Acid and similar epicatechin ๐Ÿ“š 1 studies report Decreases
Amino Acid and similar l-citrulline ๐Ÿ“š 1 studies report Increases
Antibiotics, Antivirals etc intesti-bacteriophage ๐Ÿ“š 1 studies report Decreases
Antibiotics, Antivirals etc moxalactam disodium salt (antibiotic) ๐Ÿ“š 1 studies report Decreases
choline supplements choline deficiency ๐Ÿ“š 1 studies report Decreases
citrulline amino acid l-citrulline ๐Ÿ“š 1 studies report Increases
Diet Style high carbohydrate diet ๐Ÿ“š 1 studies report Increases
flavonoid supplements epicatechin ๐Ÿ“š 1 studies report Decreases
Food (excluding seasonings) kombucha ๐Ÿ“š 2 studies report Increases
Herb or Spice foeniculum vulgare (Fennel) ๐Ÿ“š 1 studies report Decreases
Herb or Spice hypericin(St. John's Wort) ๐Ÿ“š 1 studies report Decreases
Herb or Spice jatropha curcas linn. (euphorbiaceae) ๐Ÿ“š 1 studies report Decreases
Herb or Spice kefe cumin (laser trilobum l.) ๐Ÿ“š 1 studies report Decreases
Herb or Spice nigella sativa seed (black cumin) ๐Ÿ“š 1 studies report Decreases
Herb or Spice oplopanax horridus(Devil's Club) ๐Ÿ“š 1 studies report Decreases
kombucha kombucha ๐Ÿ“š 2 studies report Increases
Miscellaneous, food additives, and other odd items heme ๐Ÿ“š 1 studies report Increases
no carbohydrate diet high carbohydrate diet ๐Ÿ“š 1 studies report Decreases
not classified Fiber, total dietary ๐Ÿ“š 1 studies report Decreases
not classified oolong tea polyphenols ๐Ÿ“š 1 studies report Decreases
not classified Sodium benzoate ๐Ÿ“š 1 studies report Decreases
Phages intesti-bacteriophage ๐Ÿ“š 1 studies report Decreases
Vitamins, Minerals and similar calcium ๐Ÿ“š 2 studies report Increases
Vitamins, Minerals and similar magnesium ๐Ÿ“š 2 studies report Increases
Vitamins, Minerals and similar Vitamin C (ascorbic acid) ๐Ÿ“š 1 studies report Increases

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