SELECT TOP (1000) [Source] ,[Taxon] ,[LowValue] ,[HighValue] ,[LowPCile] ,[HighPCile] FROM [DB_A5D9F7_Lassesen].[dbo].[JasonH]

Oxalobacter Details: NCBI 846, gram-negative or unknown [genus]

| Oxalobacter| Oxalobacter Allison et al. 1985

  1. Oxalate Metabolism: Oxalobacter formigenes is known for its ability to metabolize oxalate, a compound found in various foods. The bacterium can use oxalate as a carbon and energy source. Oxalate is a component of some kidney stones, and its metabolism by Oxalobacter formigenes may be relevant in the context of kidney stone formation.

  2. Influence on Kidney Stone Formation: Some studies suggest that the presence of Oxalobacter formigenes in the gut may be associated with a lower risk of kidney stone formation. The bacterium's ability to break down oxalate in the gut may reduce the amount of oxalate available for absorption into the bloodstream and subsequently excreted in the urine.

  3. Protection Against Hyperoxaluria: Hyperoxaluria is a condition characterized by elevated levels of oxalate in the urine, which can contribute to the formation of kidney stones. Oxalobacter formigenes may play a protective role by reducing oxalate absorption.

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Lab Reporting

Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.

Desired Levels Suggestions for Oxalobacter

These are values that are computed from lab specific samples (Patent Pending)
LabFrequencyUD-LowUD-HighKM LowKM HighLab LowLab HighMean MedianStandard DeviationBox Plot LowBox Plot High KM Percentile Low KM Percentile High
Other Labs 2.25 0 0 1 2780 0 1100 255.3 112 431.1 0 488 0 %ile 100 %ile
biomesight 37.85 0 70 10 560 0 1132 332.4 190 407.9 0 690 0 %ile 91.1 %ile
thorne 75.86 1 1335 0 666 91.3 4 293.4 0 55 0 %ile 100 %ile
thryve 27.08 0 25 1 3236 0 1020 284.4 161 375.3 0 560 0 %ile 100 %ile

External Reference Ranges for Oxalobacter

Oxalobacter (NCBI 846) per million
Source of Ranges Low Boundary High Boundary Low Boundary %age High Boundary %age
Lab Teletest 0 500 0 0.05
Jason Hawrelak 100 10000 0.01 1
Statistic by Lab Source for Oxalobacter
These desired values are reported from the lab reports
Lab Frequency Seen Average Standard Deviation Sample Count Lab Samples
AmericanGut 46.667 %   0.08 %  0.091 % 7.0 15
BiomeSight 39.944 %   0.032 %  0.038 % 1144.0 2864
BiomeSightRdp 12.5 %   0.038 %  0.018 % 4.0 32
CerbaLab 66.667 %   0.002 %  0.003 % 2.0 3
CosmosId 6.25 %   0.002 %  0.001 % 2.0 32
custom 18.644 %   0.031 %  0.014 % 11.0 59
es-xenogene 75.862 %   0.01 %  0.013 % 22.0 29
GanzimmunDiag 100 %   0.039 %  0 % 3.0 3
Medivere 85.714 %   0.019 %  0.041 % 6.0 7
SequentiaBiotech 19.444 %   0.017 %  0.007 % 7.0 36
Thorne 57.955 %   0.006 %  0.02 % 51.0 88
Thryve 25.669 %   0.028 %  0.035 % 355.0 1383
Tiny 100 %   0.001 %  % 1.0 1

Symptoms Associated with Oxalobacter From Citizen Science Studies

Click on Impact for information if high or low levels are causing the impact

MagnitudeImpactSymptom
1 Increases General: Fatigue
1 Reduces Post-exertional malaise: Inappropriate loss of physical and mental stamina,
1 Increases Sleep: Unrefreshed sleep
1 Reduces General: Myalgia (pain)
1 Increases Neurological: Short-term memory issues
1 Reduces Neurological: Disorientation
1 Increases Neurological: Word-finding problems
1 Reduces Neurological-Vision: photophobia (Light Sensitivity)
1 Reduces Neurological-Audio: hypersensitivity to noise
1 Increases Autonomic Manifestations: Orthostatic intolerance
1 Increases Autonomic Manifestations: Postural orthostatic tachycardia syndrome (POTS)
1 Increases Autonomic Manifestations: light-headedness
1 Increases Autonomic Manifestations: irritable bowel syndrome
1 Reduces Autonomic Manifestations: urinary frequency dysfunction
1 Reduces Autonomic Manifestations: bladder dysfunction
1 Reduces Autonomic Manifestations: palpitations
1 Reduces Autonomic Manifestations: exertional dyspnea
1 Increases Post-exertional malaise: Rapid muscular fatigability,
1 Reduces Post-exertional malaise: General
1 Increases Neuroendocrine Manifestations: subnormal body temperature
1 Reduces Neuroendocrine Manifestations: sweating episodes
1 Increases Neuroendocrine Manifestations: cold extremities
1 Reduces Neuroendocrine Manifestations: intolerance of extremes of heat and cold
1 Increases Neuroendocrine Manifestations: marked weight change
1 Increases Neuroendocrine Manifestations: abnormal appetite
1 Reduces Neuroendocrine Manifestations: loss of adaptability
1 Increases Neuroendocrine Manifestations: worsening of symptoms with stress.
1 Increases Immune Manifestations: tender lymph nodes
1 Increases Immune Manifestations: general malaise
1 Reduces Onset: Sudden
1 Reduces Infection: Lyme
1 Reduces Comorbid: Multiple Chemical Sensitivity
1 Reduces Comorbid: Fibromyalgia
1 Reduces Comorbid: Hypothyroidism
1 Increases Neurological: Neuropathy
1 Increases Neurological: Dysautonomia
1 Increases Neurological: Myoclonic jerks or seizures
1 Increases Neuroendocrine Manifestations: Excessive adrenaline
1 Increases Neuroendocrine Manifestations: Muscle weakness
1 Increases Neurological-Sleep: Insomnia
1 Increases Immune Manifestations: Bloating
1 Reduces Immune Manifestations: Constipation
1 Reduces Immune Manifestations: Diarrhea
1 Increases Neuroendocrine Manifestations: Air Hunger
1 Increases Neurological: Joint hypermobility
1 Reduces Onset: less than 02 years since onset
1 Reduces Onset: less than 04 years since onset
1 Increases Onset: less than 16 years since onset
1 Increases Onset: less than 32 years since onset
1 Increases Neurological-Audio: Tinnitus (ringing in ear)
1 Increases Neurological-Sleep: Night Sweats
1 Reduces Neurological-Sleep: Sleep Apnea
1 Increases Neurological: High degree of Empathy before onset
1 Reduces Neurological: Seasonal Affective Disorder (SAD)
1 Increases Neuroendocrine Manifestations: Dry Eye (Sicca or Sjogren Syndrome)
1 Increases Comorbid-Mouth: Dry Mouth
1 Reduces Comorbid: Mold Sensitivity / Exposure
1 Reduces Virus: Human Herpesvirus 6 positive (HHV6)
1 Reduces Immune Manifestations: Thick blood / Hypercoagulation
1 Increases Neurological-Sleep: Inability for deep (delta) sleep
1 Reduces Comorbid-Mouth: Gingivits / Gum Disease
1 Increases Comorbid-Mouth: TMJ / Dysfunction of the temporomandibular joint syndrome
1 Reduces Autonomic Manifestations: Cortisol disorders or irregularity
1 Reduces Comorbid: Restless Leg
1 Reduces Comorbid: Histamine or Mast Cell issues
1 Increases Neurological: Executive Decision Making (Difficulty making)
1 Increases Neuroendocrine Manifestations: Rapid muscular fatiguability
1 Increases Gender: Female
1 Increases Onset: 2010-2020
1 Increases Onset: 2000-2010
1 Reduces Age: 0-10
1 Increases Age: 20-30
1 Increases Age: 30-40
1 Reduces Age: 50-60
1 Reduces Age: 60-70
1 Increases Sleep: Waking up early in the morning (e.g. 3 AM)
1 Reduces Pain: Pain or aching in muscles
1 Reduces Pain: Joint pain
1 Reduces Pain: Eye pain
1 Increases Pain: Aching of the eyes or behind the eyes
1 Reduces Pain: Sensitivity to pain
1 Reduces Pain: Myofascial pain
1 Reduces Neuroendocrine: Lack of appetite
1 Increases Neuroendocrine: Cold limbs (e.g. arms, legs hands)
1 Increases Neuroendocrine: Feeling hot or cold for no reason
1 Increases Neuroendocrine: Feeling like you have a high temperature
1 Increases Neuroendocrine: Temperature fluctuations throughout the day
1 Reduces Immune: Sensitivity to smell/food/medication/chemicals
1 Increases Immune: Viral infections with prolonged recovery periods
1 Increases Other: Sensitivity to mold
1 Increases Other: Sensitivity to vibrations
1 Increases Autonomic: Nausea
1 Increases Autonomic: Shortness of breath
1 Increases Autonomic: Dizziness or fainting
1 Increases Autonomic: Irregular heartbeats
1 Increases Autonomic: Inability to tolerate an upright position
1 Reduces Neurocognitive: Difficulty paying attention for a long period of time
1 Increases Neurocognitive: Difficulty expressing thoughts
1 Increases Neurocognitive: Can only focus on one thing at a time
1 Increases Post-exertional malaise: Post-exertional malaise
1 Reduces Post-exertional malaise: Next-day soreness after everyday activities
1 Increases Post-exertional malaise: Mentally tired after the slightest effort
1 Increases Post-exertional malaise: Physically drained or sick after mild activity
1 Increases Post-exertional malaise: Muscle fatigue after mild physical activity
1 Increases Post-exertional malaise: Worsening of symptoms after mild physical activity
1 Reduces Official Diagnosis: Attention deficit hyperactivity disorder (ADHD)
1 Increases Official Diagnosis: Autoimmune Disease
1 Increases Official Diagnosis: Chronic Fatigue Syndrome (CFS/ME)
1 Increases Official Diagnosis: Depression
1 Increases Official Diagnosis: Irritable Bowel Syndrome
1 Increases Joint: Stiffness and swelling
1 Increases Immune Manifestations: Mucus in the stool
1 Increases Comorbid-Mouth: Mouth Sores
1 Increases Neuroendocrine Manifestations: Painful menstrual periods
1 Reduces Official Diagnosis: Fibromyalgia
1 Reduces Comorbid-Mouth: Ulcers (mouth)
1 Reduces Comorbid: Carbohydrate intolerance
1 Reduces Comorbid: Methylation issues (MTHFR)
1 Increases Immune: Chronic Sinusitis
1 Increases Autonomic: Ocassional Tachycardia (Rapid heart beat)
1 Reduces Blood Type: O Positive
1 Reduces Blood Type: A Positive
1 Reduces Comorbid: Salicylate sensitive
1 Reduces Comorbid: Sugars cause sleep or cognitive issues
1 Reduces Comorbid: Mood Swings
1 Reduces Comorbid: Constipation and Diarrohea (not explosions)
1 Increases Comorbid: Snoring (NOT Sleep Apnea
1 Reduces Comorbid: Sleep Apnea Diagnosis
1 Reduces Comorbid: Migraine
1 Reduces Official Diagnosis: Gastroesophageal reflux disease (GERD)
1 Reduces DePaul University Fatigue Questionnaire : Racing heart
1 Reduces DePaul University Fatigue Questionnaire : Shortness of breath
1 Increases DePaul University Fatigue Questionnaire : Upset stomach
1 Increases DePaul University Fatigue Questionnaire : Abdomen pain
1 Increases DePaul University Fatigue Questionnaire : Dizziness
1 Reduces DePaul University Fatigue Questionnaire : Ringing in the Ears
1 Reduces DePaul University Fatigue Questionnaire : Night sweats
1 Reduces DePaul University Fatigue Questionnaire : Chilled or shivery
1 Reduces DePaul University Fatigue Questionnaire : Hot or Cold spells
1 Increases DePaul University Fatigue Questionnaire : Feeling like you have a temperature
1 Increases DePaul University Fatigue Questionnaire : Temperature lower than normal
1 Reduces DePaul University Fatigue Questionnaire : Tingling feeling
1 Reduces DePaul University Fatigue Questionnaire : Blurred Vision
1 Reduces DePaul University Fatigue Questionnaire : Eye pain
1 Reduces DePaul University Fatigue Questionnaire : Rash
1 Reduces DePaul University Fatigue Questionnaire : Chemical sensitivity
1 Increases DePaul University Fatigue Questionnaire : Muscle weakness
1 Increases DePaul University Fatigue Questionnaire : Feel unsteady on feet
1 Increases DePaul University Fatigue Questionnaire : Slowness of thought
1 Reduces DePaul University Fatigue Questionnaire : Absent-mindedness
1 Reduces DePaul University Fatigue Questionnaire : Confusion/disorientation
1 Reduces DePaul University Fatigue Questionnaire : Difficulty reasoning things out
1 Increases DePaul University Fatigue Questionnaire : Forgetting what you are trying to say
1 Increases DePaul University Fatigue Questionnaire : Difficulty finding the right word
1 Reduces DePaul University Fatigue Questionnaire : Difficulty following things
1 Increases DePaul University Fatigue Questionnaire : Need to have to focus on one thing at a time
1 Increases DePaul University Fatigue Questionnaire : Trouble expressing thoughts
1 Increases DePaul University Fatigue Questionnaire : Difficulty retaining information
1 Increases DePaul University Fatigue Questionnaire : Difficulty recalling information
1 Reduces DePaul University Fatigue Questionnaire : Frequently get words or numbers in the wrong order
1 Reduces DePaul University Fatigue Questionnaire : Slow to react
1 Increases DePaul University Fatigue Questionnaire : New trouble with math
1 Increases DePaul University Fatigue Questionnaire : Concern with driving
1 Increases DePaul University Fatigue Questionnaire : Anxiety/tension
1 Reduces DePaul University Fatigue Questionnaire : Does physical activity make you feel better
1 Increases DePaul University Fatigue Questionnaire : Does physical activity make you feel worse
1 Increases DePaul University Fatigue Questionnaire : Fatigue
1 Increases DePaul University Fatigue Questionnaire : Sore Throat
1 Reduces DePaul University Fatigue Questionnaire : Muscle Pain (i.e., sensations of pain or aching in your muscles. This does not include weakness or pain in other areas such as joints)
1 Reduces DePaul University Fatigue Questionnaire : Pain in Multiple Joints without Swelling or Redness
1 Increases DePaul University Fatigue Questionnaire : Impaired Memory & concentration
1 Increases DePaul University Fatigue Questionnaire : Nausea
1 Reduces DePaul University Fatigue Questionnaire : Sensitivity to Alcohol
1 Increases DePaul University Fatigue Questionnaire : Unrefreshing Sleep, that is waking up feeling tired
1 Reduces DePaul University Fatigue Questionnaire : Post-exertional malaise, feeling worse after doing activities that require either physical or mental exertion
1 Reduces Condition: Post-Traumatic Stress Disorder
1 Reduces Condition: Acne
1 Increases Condition: Non-Celiac Gluten Sensitivity
1 Reduces Condition: ME/CFS with IBS
1 Reduces Condition: ME/CFS without IBS
1 Increases Physical: Tonsils removed
1 Increases Physical: Amalgam fillings
1 Increases Physical: Northern European
1 Increases Physical: Eastern European
1 Increases Physical: Long term (chronic) stress
1 Increases Physical: Breastfed
1 Reduces Physical: Pets
1 Increases Physical: Good Air Quality
1 Reduces Physical: Organic Diet
1 Increases Physical: Work-Sitting
1 Increases Physical: Steps Per Day < 2000
1 Reduces Physical: Steps Per Day 2000-4000
1 Increases Physical: Steps Per Day 4000-8000
1 Reduces Physical: Steps Per Day 8000-16000
1 Increases Neuroendocrine Manifestations: Poor gut motility
1 Reduces Autism: High Functioning
1 Reduces Official Diagnosis: Hypercholesterolemia (High Cholesterol)
1 Reduces Official Diagnosis: COVID19 (Long Hauler)
1 Increases Official Diagnosis: COVID19 (Fully Recovered)
1 Reduces General: Anhedonia (inability to feel pleasure)

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Data Contradictions β€” Limits of Certainity

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General Substance Specific Substance Effect
Food (excluding seasonings) kombucha 1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings) whey 1 Studies recorded. The consensus is Increases👶, Click for details.
Vitamins, Minerals and similar calcium 3 Studies recorded. The consensus is Increases👶👪📓, Click for details.
Vitamins, Minerals and similar magnesium 3 Studies recorded. The consensus is Increases👶👪📓, Click for details.
Vitamins, Minerals and similar Vitamin C (ascorbic acid) 3 Studies recorded. The consensus is Increases👶👪📓, Click for details.

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