Details about Phocaeicola: NCBI 909656

Note: NCBI has updated names - we are standardizing on 'scientific name'

gram-negative or unknown

Other Names: Phocaeicola Phocaeicola Al Masalma et al. 2009

Distribution Chart and Statistics    |    End Products Produced   |    ๐Ÿ“š PubMed Citations   |    386 Interactions with Other Bacteria

Medical Condition Associated

Based on the 71K samples on GMrepo : a curated database of human gut metagenomes as of Oct,2021


Adenoma  Alzheimer Disease  Attention Deficit Disorder with Hyperactivity  Autism Spectrum Disorder  Autoimmune Diseases  Bipolar Disorder  Cardiovascular Diseases  Celiac Disease  Chronic Periodontitis  Clostridium Infections  Colitis, Ulcerative  Colorectal Neoplasms  Constipation  Crohn Disease  Depression  Diabetes Mellitus  Diabetes Mellitus, Type 2  Diabetes, Gestational  Diarrhea  Eczema  Hepatitis B virus  HIV  Inflammatory Bowel Diseases  Intestinal Diseases  Irritable Bowel Syndrome  Kidney Diseases  Kidney Failure, Chronic  Liver Cirrhosis  Liver Diseases  Lung Diseases  Migraine Disorders  Non-alcoholic Fatty Liver Disease  Obesity  Precursor Cell Lymphoblastic Leukemia-Lymphoma  Short Bowel Syndrome  Spondylarthritis  Stomach Neoplasms  Thyroid Diseases  Thyroid Neoplasms 


Recommended reading: Taxonomy Nightmare

Does a specific lab/source detect it?


Click on to see lab specific distribution
SourcePercentagesamples
es-xenogene 0 % 4
SequentiaBiotech 0 % 38
BiomeSightRdp 0 % 10
CosmosId 0 % 31
AmericanGut 0 % 18
custom 0 % 10
Microba 0 % 11
Medivere 0 % 8
uBiome 0.12 % 833
Thryve 24.58 % 773
BiomeSight 0 % 670

Desired Levels from Some Experts

Some sources used the IQR range (25%ile-75%ile) of healthy controls. This means that 50% of healthy controls will be out of range.

The KM ranges detect where abnormal ranges start

Percentage Seen in Sample
Low Boundary High Boundary Source
0.001 %0.0074 % Kaltoft-Moltrup Normal Ranges

Ranges can vary from lab to lab because of different equipment and software being used.

A value of 50 means typical average value. Below 50, lower values, above 50 higher values

Determined from annotated data uploaded to this site for {taxname}
Z-ScoreSymptom NameTypical Value
5.2     Post-exertional malaise: Mentally tired after the slightest effort    81
4.6     Post-exertional malaise: Worsening of symptoms after mild mental activity    78
4.4     Neurological: Cognitive/Sensory Overload    77
4.3     Autonomic: Shortness of breath    72
4.1     DePaul University Fatigue Questionnaire : Walking up early in the morning (e.g. 3AM)    77
3.7     Immune Manifestations: Hair loss    67
3.2     Neuroendocrine Manifestations: intolerance of extremes of heat and cold    73
3     Post-exertional malaise: Next-day soreness after everyday activities    70
2.9     Neurological: Difficulty processing information (Understanding)    73
2.9     Neurological: Word-finding problems    68

I would like to know about this bacteria's

I would like to know what can change the quality that I have

You can compare microbiome impact of these by checking the desired items (try keeping the numbers below six(6) and clicking

๐Ÿ““ - direct citation | ๐Ÿ‘ช - Impacts Parent Taxa | ๐Ÿ‘ถ - Impacts Child Taxa | ๐Ÿง™ - Inferred
Search Hints:
General Substance Specific Substance Effect
Amino Acid and similar acetic acid ๐Ÿ“š 1 studies report Increases
Amino Acid and similar choline deficiency ๐Ÿ“š 1 studies report Increases
Antibiotics, Antivirals etc intesti-bacteriophage ๐Ÿ“š 1 studies report Decreases
Antibiotics, Antivirals etc moxalactam disodium salt (antibiotic) ๐Ÿ“š 1 studies report Decreases
butyrate supplements isobutyric acid ๐Ÿ“š 1 studies report Increases
choline supplements choline deficiency ๐Ÿ“š 1 studies report Decreases
Herb or Spice foeniculum vulgare (Fennel) ๐Ÿ“š 1 studies report Decreases
Herb or Spice hypericin(St. John's Wort) ๐Ÿ“š 1 studies report Decreases
Herb or Spice jatropha curcas linn. (euphorbiaceae) ๐Ÿ“š 1 studies report Decreases
Herb or Spice kefe cumin (laser trilobum l.) ๐Ÿ“š 1 studies report Decreases
Herb or Spice nigella sativa seed (black cumin) ๐Ÿ“š 1 studies report Decreases
Herb or Spice oplopanax horridus(Devil's Club) ๐Ÿ“š 1 studies report Decreases
isovaleric acid supplement isovaleric acid(fatty acid) ๐Ÿ“š 1 studies report Increases
Miscellaneous, food additives, and other odd items isobutyric acid ๐Ÿ“š 1 studies report Increases
Miscellaneous, food additives, and other odd items isovaleric acid(fatty acid) ๐Ÿ“š 1 studies report Increases
Phages intesti-bacteriophage ๐Ÿ“š 1 studies report Decreases
vinegar acetic acid ๐Ÿ“š 1 studies report Increases

(Legacy User)

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