[GmRepo] Bacteria associated to Arthritis, Rheumatoid

This is a novel way of detecting patterns, instead of looking at the values, we use the rare bacteria to determine if the rate bacteria shifts matches. The table below does not show the amount, but how often a bacteria is seen in samples with various conditions. In general, if it is seen less, it is likely that the percentile values seen will be lower. If it seen more, than the percentile values will likely be higher than average.

If you are not logged in, you will see the full list. If you are logged in, then it is filtered to the sample you have selected. The data comes from 72,000+ samples on GMrepo : a curated database of human gut metagenomes

This is an experimental analysis

These are not predictive (chicken and egg questions). Values over 66% or below 33% that are a match may be a concern

Rank Name Arthritis, Rheumatoid
genus Acidaminococcus Less
genus Actinomyces Less
genus Aeromonas More
genus Alcaligenes Less
genus Alloscardovia Less
genus Anaerococcus Less
genus Anaerofustis Less
genus Anaerotruncus Less
genus Atopobium Less
genus Brevibacterium Less
genus Brevundimonas Less
genus Butyricicoccus More
genus Butyricimonas Less
genus Butyrivibrio Less
genus Catenibacterium Less
genus Comamonas Less
genus Corynebacterium Less
genus Deinococcus Less
genus Dialister Less
genus Enhydrobacter More
genus Gardnerella Less
genus Granulicatella Less
genus Lactococcus Less
genus Methanobrevibacter Less
genus Micrococcus Less
genus Mycoplasma Less
genus Neisseria Less
genus Ochrobactrum Less
genus Paracoccus Less
genus Pediococcus Less
genus Peptoniphilus Less
genus Peptostreptococcus Less
genus Propionibacterium Less
genus Providencia More
genus Pseudomonas Less
genus Raoultella Less
genus Shigella More
genus Solobacterium Less
genus Sphingobium Less
genus Stenotrophomonas Less
genus Sutterella More
genus Treponema Less
genus Turicibacter Less
species [Clostridium] hiranonis More
species [Clostridium] leptum Less
species [Clostridium] scindens Less
species [Eubacterium] dolichum Less
species Acidaminococcus intestini Less
species Acinetobacter junii Less
species Acinetobacter phenon 1 Less
species Actinomyces cardiffensis More
species Actinomyces georgiae More
species Actinomyces johnsonii Less
species Actinomyces massiliensis Less
species Actinomyces naeslundii Less
species Aeromonas hydrophila More
species Aeromonas veronii More
species Alloscardovia omnicolens Less
species Anaerofustis stercorihominis Less
species Anaerostipes hadrus Less
species Anaerotruncus colihominis Less
species ATCC 13162 More
species ATCC 51230 Less
species Atopobium parvulum Less
species Bacillus licheniformis More
species Bacillus megaterium More
species Bacteroides clarus Less
species Bacteroides faecis Less
species Bacteroides fluxus More
species Bacteroides plebeius More
species Bifidobacterium catenulatum Less
species Blautia obeum Less
species Blautia producta Less
species Butyricicoccus pullicaecorum More
species Butyricimonas synergistica Less
species Butyrivibrio crossotus Less
species Campylobacter concisus Less
species Campylobacter gracilis Less
species Catenibacterium mitsuokai Less
species Clostridium difficile Less
species Clostridium perfringens Less
species Clostridium sp. ATCC BAA-442 More
species Comamonas testosteroni Less
species Coprococcus eutactus More
species Coriobacteriaceae bacterium phI Less
species Corynebacterium variabile Less
species Cutibacterium acnes Less
species Desulfovibrio desulfuricans Less
species Dialister invisus Less
species Dialister micraerophilus Less
species Dialister succinatiphilus Less
species Enhydrobacter aerosaccus More
species Enterobacter mori Less
species Enterococcus durans Less
species Enterococcus gallinarum Less
species Enterococcus raffinosus Less
species Erysipelotrichaceae bacterium 2_2_44A Less
species Erysipelotrichaceae bacterium 21_3 Less
species Erysipelotrichaceae bacterium 5_2_54FAA Less
species Eubacterium brachy Less
species Eubacterium sp. 3_1_31 Less
species Faecalitalea cylindroides Less
species Fusobacterium gonidiaformans Less
species Fusobacterium nucleatum Less
species Fusobacterium varium Less
species Gardnerella vaginalis Less
species Gemella haemolysans Less
species Granulicatella adiacens Less
species Haemophilus haemolyticus Less
species Haemophilus parahaemolyticus Less
species Holdemanella biformis Less
species Klebsiella aerogenes Less
species Lachnospiraceae bacterium 3_1_57FAA_CT1 Less
species Lachnospiraceae bacterium 5_1_57FAA Less
species Lachnospiraceae bacterium 6_1_63FAA Less
species Lachnospiraceae bacterium 8_1_57FAA Less
species Lactobacillus acidophilus Less
species Lactobacillus casei Less
species Lactobacillus delbrueckii Less
species Lactobacillus oris Less
species Lactobacillus plantarum Less
species Lactobacillus rhamnosus Less
species Lactobacillus ruminis Less
species Lactococcus lactis Less
species Leuconostoc lactis More
species LMG:7867 Less
species Megasphaera elsdenii Less
species Methanobrevibacter smithii Less
species Micrococcus luteus Less
species Mitsuokella multacida More
species Mycoplasma hominis Less
species Ochrobactrum anthropi Less
species Oscillibacter sp. KLE 1745 Less
species Pediococcus acidilactici Less
species Peptoniphilus lacrimalis Less
species Prevotella bivia Less
species Prevotella buccae Less
species Prevotella buccalis Less
species Prevotella timonensis Less
species Providencia rettgeri More
species Raoultella ornithinolytica Less
species Rothia dentocariosa Less
species Ruminococcus albus Less
species Ruminococcus flavefaciens Less
species Shigella sonnei More
species Solobacterium moorei Less
species Stenotrophomonas maltophilia Less
species Streptococcus cristatus Less
species Streptococcus faecalis Less
species Streptococcus infantis Less
species Streptococcus mitis Less
species Streptococcus vestibularis Less
species Sutterella parvirubra More
species Treponema socranskii Less
species Turicibacter sanguinis Less

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