[GmRepo] Bacteria associated to Shiga-Toxigenic Escherichia coli

This is a novel way of detecting patterns, instead of looking at the values, we use the rare bacteria to determine if the rate bacteria shifts matches. The table below does not show the amount, but how often a bacteria is seen in samples with various conditions. In general, if it is seen less, it is likely that the percentile values seen will be lower. If it seen more, than the percentile values will likely be higher than average.

If you are not logged in, you will see the full list. If you are logged in, then it is filtered to the sample you have selected. The data comes from 72,000+ samples on GMrepo : a curated database of human gut metagenomes

This is an experimental analysis

These are not predictive (chicken and egg questions). Values over 66% or below 33% that are a match may be a concern

Rank Name Shiga-Toxigenic Escherichia coli
genus Actinomyces Less
genus Adlercreutzia More
genus Akkermansia Less
genus Bacteroides Less
genus Blautia More
genus Coprobacillus More
genus Corynebacterium Less
genus Eggerthella More
genus Enterobacter More
genus Enterococcus More
genus Escherichia More
genus Flavonifractor Less
genus Granulicatella More
genus Megasphaera Less
genus Parabacteroides Less
genus Parvimonas More
genus Peptostreptococcus More
genus Prevotella Less
genus Pseudomonas Less
genus Ruminococcus More
genus Streptococcus More
genus Subdoligranulum Less
species [Clostridium] bolteae Less
species [Clostridium] clostridioforme More
species [Clostridium] symbiosum More
species [Eubacterium] eligens Less
species [Eubacterium] hallii More
species [Eubacterium] rectale More
species [Ruminococcus] gnavus More
species Adlercreutzia equolifaciens More
species Akkermansia muciniphila Less
species Anaerostipes hadrus Less
species Bacteroides caccae Less
species Bacteroides thetaiotaomicron Less
species Bacteroides uniformis Less
species Bacteroides vulgatus Less
species Bifidobacterium breve More
species Bifidobacterium catenulatum More
species Bifidobacterium dentium Less
species Bifidobacterium longum More
species Bifidobacterium pseudolongum Less
species CCUG 11878 More
species CCUG 46149 Less
species CCUG 46150 More
species Enterobacter cloacae More
species Enterococcus avium More
species Enterococcus durans Less
species Enterococcus faecium Less
species Enterococcus raffinosus More
species Erysipelatoclostridium ramosum Less
species Erysipelotrichaceae bacterium 21_3 More
species Erysipelotrichaceae bacterium 3_1_53 Less
species Eubacterium oxidoreducens More
species Flavonifractor plautii Less
species Granulicatella adiacens More
species Haemophilus haemolyticus Less
species Haemophilus paraphrohaemolyticus Less
species Haemophilus sputorum Less
species Intestinibacter bartlettii More
species Klebsiella pneumoniae aerogenes Less
species Lachnospiraceae bacterium 1_1_57FAA Less
species Lachnospiraceae bacterium 8_1_57FAA Less
species Lachnospiraceae bacterium 9_1_43BFAA Less
species Lactobacillus fermentum Less
species Paeniclostridium sordellii Less
species Parabacteroides distasonis Less
species Parabacteroides merdae Less
species Parvimonas micra More
species Peptostreptococcus stomatis More
species Roseburia intestinalis More
species Ruminococcus bromii More
species Ruminococcus callidus Less
species Ruminococcus lactaris More
species Ruminococcus sp. 5_1_39BFAA More
species Serratia marcescens Less
species Streptococcus agalactiae Less
species Streptococcus australis More
species Streptococcus infantarius Less
species Streptococcus intermedius More
species Streptococcus vestibularis Less
species Tyzzerella nexilis More

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Copyright 2016-2021 Lassesen Consulting, LLC [2007], DBA, Microbiome Prescription. All rights served. Permission to data scrap or reverse engineer is explicitly denied to all users. U.S. Code Title 18 PART I CHAPTER 47 ยงโ€ฏ1030, CETS No.185, CFAA