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Data Contradictions — Limits of Certainity

Impacted On Probiotics

Rank Probitoic Impact
species Enterococcus durans Reduces
species Enterococcus faecalis Reduces
species Enterococcus faecium Reduces
species Escherichia coli Increases
species Pseudomonas sp. cn4902 Reduces
species group Pseudomonas putida group Reduces

Bacteria Impacted

We extend modifiers to include items that changes the parent and child taxa. I.e. for a species, that would be the genus that is belongs to and the strains in the species.

🧙?

Taxonomy Rank Effect Citations Notation
Acidaminococcaceae family Decreases 👪
Bacteroidaceae family Decreases 👪
Eggerthellaceae family Decreases 👪
Enterococcaceae family Decreases 👪
Pseudomonadaceae family Decreases 👪
Staphylococcaceae family Decreases 👪
Enterobacteriaceae family Increases 👪
Eubacteriaceae family Increases 👪
Fusobacteriaceae family Increases 👪
Adlercreutzia genus Decreases 📓
Bacteroides genus Decreases 📓
Enterococcus genus Decreases 📓
Phascolarctobacterium genus Decreases 📓
Pseudomonas genus Decreases 📓
Staphylococcus genus Decreases 📓
Fastidiosipila genus Decreases ⚗️
Kluyvera genus Increases 👶
Escherichia genus Increases 📓
Eubacterium genus Increases 📓
Fusobacterium genus Increases 📓 Periodontal disease, Lemierre syndrome, skin ulcers
Enterococcus faecalis 02-MB-BW-10 norank Decreases 👶
Enterococcus faecalis 06-MB-S-04 norank Decreases 👶
Enterococcus faecalis OG1RF norank Decreases 👶
Enterococcus faecalis str. TUSoD Ef11 norank Decreases 👶
Enterococcus faecalis TX4000 norank Decreases 👶
Staphylococcus aureus 04-02981 norank Decreases 👶
Staphylococcus aureus 07-03450 norank Decreases 👶
environmental samples norank Decreases 👶
environmental samples norank Decreases 👶
unclassified Phascolarctobacterium norank Decreases ⚗️
unclassified Megasphaera norank Increases ⚗️
unclassified Eubacterium norank Increases ⚗️
unclassified Fusobacterium norank Increases ⚗️
environmental samples norank Increases 👶
Eggerthellales order Decreases ⚗️
Bacteroides thetaiotaomicron species Decreases 📓
Fusobacterium nucleatum species Decreases 👪 Infectious bacteria
Enterococcus faecalis species Decreases 📓 Endocarditis, septicemia, urinary tract infections, meningitis
Pseudomonas aeruginosa species Decreases 📓 Opportunistic, nosocomial pneumonia and sepsis
Staphylococcus aureus species Decreases 📓 Skin infections, sinusitis, food poisoning
Adlercreutzia equolifaciens species Decreases 👶
Adlercreutzia sp. species Decreases 👶
ATCC 29974 species Decreases 👶
ATCC 49168 species Decreases 👶
ATCC 49910 species Decreases 👶
ATCC 700373 species Decreases 👶
ATCC BAA-257 species Decreases 👶
Atopomonas hussainii species Decreases 👶
Bacteroides acidifaciens species Decreases 👶
Bacteroides caccae species Decreases 👶
Bacteroides caecigallinarum species Decreases 👶
Bacteroides caecimuris species Decreases 👶
Bacteroides cellulosilyticus species Decreases 👶
Bacteroides chinchillae species Decreases 👶
Bacteroides clarus species Decreases 👶
Bacteroides coprosuis species Decreases 👶
Bacteroides denticanum species Decreases 👶
Bacteroides eggerthii species Decreases 👶
Bacteroides faecichinchillae species Decreases 👶
Bacteroides faecis species Decreases 👶
Bacteroides finegoldii species Decreases 👶
Bacteroides fluxus species Decreases 👶
Bacteroides fragilis species Decreases 👶 H02076 Bacteroides infection
Bacteroides galacturonicus species Decreases 👶
Bacteroides gallinarum species Decreases 👶
Bacteroides graminisolvens species Decreases 👶
Bacteroides helcogenes species Decreases 👶
Bacteroides heparinolyticus species Decreases 👶
Bacteroides intestinalis species Decreases 👶
Bacteroides luti species Decreases 👶
Bacteroides mediterraneensis Mailhe et al. 2016 species Decreases 👶
Bacteroides nordii species Decreases 👶
Bacteroides oleiciplenus species Decreases 👶
Bacteroides ovatus species Decreases 👶
Bacteroides propionicifaciens species Decreases 👶
Bacteroides pyogenes species Decreases 👶
Bacteroides reticulotermitis species Decreases 👶
Bacteroides rodentium species Decreases 👶
Bacteroides salyersiae species Decreases 👶
Bacteroides sp. species Decreases 👶
Bacteroides sp. 'Smarlab BioMol-2301151' species Decreases 👶
Bacteroides sp. 1_1_14 species Decreases 👶
Bacteroides sp. 1_1_30 species Decreases 👶
Bacteroides sp. 14(A) species Decreases 👶
Bacteroides sp. 1B2 species Decreases 👶
Bacteroides sp. 2_1_33B species Decreases 👶
Bacteroides sp. 2_2_4 species Decreases 👶
Bacteroides sp. 2011_Ileo_VSA_D11 species Decreases 👶
Bacteroides sp. 2011_Ileo_VSA_D7 species Decreases 👶
Bacteroides sp. 2011_Ileo_VSA_D8 species Decreases 👶
Bacteroides sp. 265d species Decreases 👶
Bacteroides sp. 3_1_19 species Decreases 👶
Bacteroides sp. 3_1_23 species Decreases 👶
Bacteroides sp. 3_1_33FAA species Decreases 👶
Bacteroides sp. 3_1_40A species Decreases 👶
Bacteroides sp. 314-4 species Decreases 👶
Bacteroides sp. 31SF15 species Decreases 👶
Bacteroides sp. 35AE37 species Decreases 👶
Bacteroides sp. 35BE34 species Decreases 👶
Bacteroides sp. 35BE35 species Decreases 👶
Bacteroides sp. 4_1_36 species Decreases 👶
Bacteroides sp. 4_3_47FAA species Decreases 👶
Bacteroides sp. 4072 species Decreases 👶
Bacteroides sp. 6-8 species Decreases 👶
Bacteroides sp. 7853 species Decreases 👶
Bacteroides sp. 9_1_42FAA species Decreases 👶
Bacteroides sp. A1C1 species Decreases 👶
Bacteroides sp. AR20 species Decreases 👶
Bacteroides sp. AR29 species Decreases 👶
Bacteroides sp. baku-33 species Decreases 👶
Bacteroides sp. BLBE-2 species Decreases 👶
Bacteroides sp. C13EG172 species Decreases 👶
Bacteroides sp. CB57 species Decreases 👶
Bacteroides sp. D1 species Decreases 👶
Bacteroides sp. D2 species Decreases 👶
Bacteroides sp. D20 species Decreases 👶
Bacteroides sp. D22 species Decreases 👶
Bacteroides sp. D8 species Decreases 👶
Bacteroides sp. DJF_B097 species Decreases 👶
Bacteroides sp. dnLKV2 species Decreases 👶
Bacteroides sp. dnLKV3 species Decreases 👶
Bacteroides sp. dnLKV7 species Decreases 👶
Bacteroides sp. dnLKV9 species Decreases 👶
Bacteroides sp. EBA5-17 species Decreases 👶
Bacteroides sp. ES-27 species Decreases 👶
Bacteroides sp. HGA0134 species Decreases 👶
Bacteroides sp. HPS0048 species Decreases 👶
Bacteroides sp. J1511 species Decreases 👶
Bacteroides sp. MANG species Decreases 👶
Bacteroides sp. R6 species Decreases 👶
Bacteroides sp. S-17 species Decreases 👶
Bacteroides sp. S-18 species Decreases 👶
Bacteroides sp. SLC1-38 species Decreases 👶
Bacteroides sp. Smarlab 3301643 species Decreases 👶
Bacteroides sp. Smarlab 3302398 species Decreases 👶
Bacteroides sp. TP-5 species Decreases 👶
Bacteroides sp. UW species Decreases 👶
Bacteroides sp. WA1 species Decreases 👶
Bacteroides sp. WH302 species Decreases 👶
Bacteroides sp. WH305 species Decreases 👶
Bacteroides sp. XB12B species Decreases 👶
Bacteroides sp. XB44A species Decreases 👶
Bacteroides stercorirosoris species Decreases 👶
Bacteroides stercoris species Decreases 👶
Bacteroides timonensis species Decreases 👶
Bacteroides uniformis species Decreases 👶 Infectious bacteria
Bacteroides xylanisolvens species Decreases 👶
Bacteroides zoogleoformans species Decreases 👶
Candidatus Bacteroides periocalifornicus McLean et al. 2015 species Decreases 👶
CCM 7045 species Decreases 👶
CCM 7213 species Decreases 👶
CCM 7299 species Decreases 👶
CCM 7717 species Decreases 👶
CCM 7990 species Decreases 👶
CCTCC AB 207151 species Decreases 👶
CCUG 51504 species Decreases 👶
CCUG 51516 species Decreases 👶
CCUG 53116 species Decreases 👶
CCUG 58201 species Decreases 👶
CCUG 63249 species Decreases 👶
CECT 7670 species Decreases 👶
CECT 8338 species Decreases 👶
CFBP 11706 species Decreases 👶
CGMCC 1.15942 species Decreases 👶
CIP 109839 species Decreases 👶
DSM 101070 species Decreases 👶
DSM 16611 species Decreases 👶
DSM 28040 species Decreases 👶
DSM 28043 species Decreases 👶
DSM 28299 species Decreases 👶
DSM 28300 species Decreases 👶
Enterococcus alcedinis species Decreases 👶
Enterococcus aquimarinus species Decreases 👶
Enterococcus asini species Decreases 👶
Enterococcus avium species Decreases 👶 H01444 Enterococcal infection
Enterococcus camelliae species Decreases 👶
Enterococcus canis species Decreases 👶
Enterococcus casseliflavus species Decreases 👶
Enterococcus cecorum species Decreases 👶
Enterococcus columbae species Decreases 👶
Enterococcus diestrammenae species Decreases 👶
Enterococcus dispar species Decreases 👶
Enterococcus durans species Decreases 👶
Enterococcus faecium species Decreases 👶 Pathogen
Enterococcus gallinarum species Decreases 👶
Enterococcus gilvus species Decreases 👶
Enterococcus haemoperoxidus species Decreases 👶
Enterococcus hawaiiensis species Decreases 👶
Enterococcus hermanniensis species Decreases 👶
Enterococcus hirae species Decreases 👶
Enterococcus italicus species Decreases 👶
Enterococcus lactis species Decreases 👶
Enterococcus malodoratus species Decreases 👶
Enterococcus mundtii species Decreases 👶
Enterococcus pallens species Decreases 👶
Enterococcus pseudoavium species Decreases 👶
Enterococcus quebecensis species Decreases 👶
Enterococcus raffinosus species Decreases 👶
Enterococcus saccharolyticus species Decreases 👶
Enterococcus silesiacus species Decreases 👶
Enterococcus sp. species Decreases 👶
Enterococcus sp. C6I11 species Decreases 👶
Enterococcus sp. FDAARGOS_375 species Decreases 👶
Enterococcus sp. HSIEG1 species Decreases 👶
Enterococcus sp. SI-4 species Decreases 👶
Enterococcus sulfureus species Decreases 👶
Enterococcus ureasiticus species Decreases 👶
Entomomonas moraniae species Decreases 👶
Halopseudomonas pachastrellae species Decreases 👶
Halopseudomonas pelagia species Decreases 👶
Hungatella xylanolytica species Decreases 👶
JCM 14963 species Decreases 👶
KCTC 32246 species Decreases 👶
LTH 3734 species Decreases 👶
Mammaliicoccus fleurettii species Decreases 👶
Mammaliicoccus sciuri species Decreases 👶
Mammaliicoccus vitulinus species Decreases 👶
PCU:282 species Decreases 👶
Phascolarctobacterium faecium species Decreases 👶
Phascolarctobacterium sp. species Decreases 👶
Phascolarctobacterium sp. 377 species Decreases 👶
Phascolarctobacterium sp. CAG:207 species Decreases 👶
Phascolarctobacterium sp. canine oral taxon 149 species Decreases 👶
Phascolarctobacterium sp. canine oral taxon 212 species Decreases 👶
Phascolarctobacterium succinatutens species Decreases 👶
Phocaeicola barnesiae species Decreases 👶
Phocaeicola coprocola species Decreases 👶
Phocaeicola coprophilus species Decreases 👶
Phocaeicola dorei species Decreases 👶
Phocaeicola massiliensis species Decreases 👶
Phocaeicola paurosaccharolyticus species Decreases 👶
Phocaeicola plebeius species Decreases 👶
Phocaeicola salanitronis species Decreases 👶
Phocaeicola sartorii species Decreases 👶
Phocaeicola vulgatus species Decreases 👶
Pseudomonas abietaniphila species Decreases 👶
Pseudomonas agarici species Decreases 👶
Pseudomonas alcaligenes species Decreases 👶
Pseudomonas anguilliseptica species Decreases 👶
Pseudomonas caricapapayae species Decreases 👶
Pseudomonas chloritidismutans species Decreases 👶
Pseudomonas cinnamophila species Decreases 👶
Pseudomonas citronellolis species Decreases 👶
Pseudomonas clemancea species Decreases 👶
Pseudomonas denitrificans ATCC 13867 species Decreases 👶
Pseudomonas entomophila species Decreases 👶
Pseudomonas gingeri species Decreases 👶
Pseudomonas guangdongensis species Decreases 👶
Pseudomonas guguanensis species Decreases 👶
Pseudomonas guineae species Decreases 👶
Pseudomonas japonica species Decreases 👶
Pseudomonas knackmussii species Decreases 👶
Pseudomonas koreensis species Decreases 👶
Pseudomonas kribbensis species Decreases 👶
Pseudomonas lundensis species Decreases 👶
Pseudomonas mendocina species Decreases 👶
Pseudomonas metavorans species Decreases 👶
Pseudomonas moraviensis species Decreases 👶
Pseudomonas oryzae species Decreases 👶
Pseudomonas otitidis species Decreases 👶
Pseudomonas panacis species Decreases 👶
Pseudomonas panipatensis species Decreases 👶
Pseudomonas parafulva species Decreases 👶
Pseudomonas phragmitis species Decreases 👶
Pseudomonas poae species Decreases 👶
Pseudomonas pohangensis species Decreases 👶
Pseudomonas proteolytica species Decreases 👶
Pseudomonas psychrophila species Decreases 👶
Pseudomonas resinovorans species Decreases 👶
Pseudomonas saponiphila species Decreases 👶
Pseudomonas saudiphocaensis species Decreases 👶
Pseudomonas sessilinigenes species Decreases 👶
Pseudomonas sp. 02C 26 species Decreases 👶
Pseudomonas sp. 108Z1 species Decreases 👶
Pseudomonas sp. 31-12 species Decreases 👶
Pseudomonas sp. 7SR1 species Decreases 👶
Pseudomonas sp. a101-18-2 species Decreases 👶
Pseudomonas sp. a111-5 species Decreases 👶
Pseudomonas sp. ACM7 species Decreases 👶
Pseudomonas sp. CC6-YY-74 species Decreases 👶
Pseudomonas sp. CMR5c species Decreases 👶
Pseudomonas sp. cn4902 species Decreases 👶
Pseudomonas sp. DQ-01 species Decreases 👶
Pseudomonas sp. DTU12.3 species Decreases 👶
Pseudomonas sp. DY-1 species Decreases 👶
Pseudomonas sp. G1116 species Decreases 👶
Pseudomonas sp. GmFRB023 species Decreases 👶
Pseudomonas sp. HB02 species Decreases 👶
Pseudomonas sp. KB23 species Decreases 👶
Pseudomonas sp. KVS86 species Decreases 👶
Pseudomonas sp. LH1G9 species Decreases 👶
Pseudomonas sp. LPH1 species Decreases 👶
Pseudomonas sp. LTJR-52 species Decreases 👶
Pseudomonas sp. M_36 species Decreases 👶
Pseudomonas sp. MFY143 species Decreases 👶
Pseudomonas sp. MRSN12121 species Decreases 👶
Pseudomonas sp. MT-1 species Decreases 👶
Pseudomonas sp. NS1(2017) species Decreases 👶
Pseudomonas sp. PcFRB072 species Decreases 👶
Pseudomonas sp. PcFRB119 species Decreases 👶
Pseudomonas sp. PONIH3 species Decreases 👶
Pseudomonas sp. ps4-2 species Decreases 👶
Pseudomonas sp. PsF species Decreases 👶
Pseudomonas sp. PsG species Decreases 👶
Pseudomonas sp. R4-34-07 species Decreases 👶
Pseudomonas sp. R5-89-07 species Decreases 👶
Pseudomonas sp. RU47 species Decreases 👶
Pseudomonas sp. StFLB209 species Decreases 👶
Pseudomonas sp. SWI36 species Decreases 👶
Pseudomonas sp. TCU-HL1 species Decreases 👶
Pseudomonas sp. TMW 2.1634 species Decreases 👶
Pseudomonas sp. URMO17WK12:I11 species Decreases 👶
Pseudomonas sp. WCS374 species Decreases 👶
Pseudomonas straminea species Decreases 👶
Pseudomonas syncyanea species Decreases 👶
Pseudomonas teessidea species Decreases 👶
Pseudomonas thermotolerans species Decreases 👶
Pseudomonas tremae species Decreases 👶
Pseudomonas tropicalis species Decreases 👶
Pseudomonas veronii species Decreases 👶
Staphylococcus agnetis species Decreases 👶
Staphylococcus auricularis species Decreases 👶
Staphylococcus capitis species Decreases 👶
Staphylococcus caprae species Decreases 👶
Staphylococcus carnosus species Decreases 👶
Staphylococcus chromogenes species Decreases 👶
Staphylococcus debuckii species Decreases 👶
Staphylococcus delphini species Decreases 👶
Staphylococcus devriesei species Decreases 👶
Staphylococcus epidermidis species Decreases 👶 Nosocomial and opportunistic infections
Staphylococcus equorum species Decreases 👶
Staphylococcus gallinarum species Decreases 👶
Staphylococcus haemolyticus species Decreases 👶 Pathogen
Staphylococcus hominis species Decreases 👶 Opportunistic infections
Staphylococcus hyicus species Decreases 👶
Staphylococcus intermedius species Decreases 👶
Staphylococcus kloosii species Decreases 👶
Staphylococcus lugdunensis species Decreases 👶
Staphylococcus pasteuri species Decreases 👶
Staphylococcus pettenkoferi species Decreases 👶
Staphylococcus piscifermentans species Decreases 👶
Staphylococcus pseudintermedius species Decreases 👶
Staphylococcus pseudolugdunensis species Decreases 👶
Staphylococcus saprophyticus species Decreases 👶 Urinary tract infections
Staphylococcus schleiferi species Decreases 👶
Staphylococcus simulans species Decreases 👶
Staphylococcus sp. 3035O2 species Decreases 👶
Staphylococcus sp. 3348O2 species Decreases 👶
Staphylococcus sp. 3356O2 species Decreases 👶
Staphylococcus sp. C9I2 species Decreases 👶
Staphylococcus sp. ChrGC_Staph species Decreases 👶
Staphylococcus sp. FXY54 species Decreases 👶
Staphylococcus sp. L10 species Decreases 👶
Staphylococcus sp. M0911 species Decreases 👶
Staphylococcus sp. NEAU-ST15-26 species Decreases 👶
Staphylococcus sp. WB18-16 species Decreases 👶
Staphylococcus succinus species Decreases 👶
Staphylococcus warneri species Decreases 👶
Staphylococcus xylosus species Decreases 👶
Slackia sp. NATTS species Decreases ⚗️
[Eubacterium] cellulosolvens species Increases 👶
ATCC 35469 species Increases 👶
Escherichia albertii species Increases 👶
Escherichia coli species Increases 👶 Diarrheal disease in children and travelers, Foodborne diarrhea outbreaks, hemorrhagic colitis, hemolytic-uremic syndrome
Escherichia marmotae species Increases 👶
Escherichia sp. species Increases 👶
Eubacterium callanderi species Increases 👶
Eubacterium coprostanoligenes species Increases 👶
Eubacterium limosum species Increases 👶
Eubacterium oxidoreducens species Increases 👶
Eubacterium pyruvativorans species Increases 👶
Eubacterium ramulus species Increases 👶
Eubacterium rangiferina species Increases 👶
Eubacterium ruminantium species Increases 👶
Eubacterium sp. species Increases 👶
Eubacterium sp. 3_1_31 species Increases 👶
Eubacterium sp. ARC-2 species Increases 👶
Eubacterium sp. ER2 species Increases 👶
Eubacterium sp. oral strain A35MT species Increases 👶
Eubacterium sp. SA11 species Increases 👶
Eubacterium uniforme species Increases 👶
Eubacterium ventriosum species Increases 👶
Eubacterium xylanophilum species Increases 👶
Fusobacterium canifelinum species Increases 👶
Fusobacterium equinum species Increases 👶
Fusobacterium gonidiaformans species Increases 👶
Fusobacterium hwasookii species Increases 👶
Fusobacterium mortiferum species Increases 👶
Fusobacterium naviforme species Increases 👶
Fusobacterium necrogenes species Increases 👶
Fusobacterium necrophorum species Increases 👶 Pathogen
Fusobacterium perfoetens species Increases 👶
Fusobacterium periodonticum species Increases 👶
Fusobacterium russii species Increases 👶
Fusobacterium simiae species Increases 👶
Fusobacterium sp. species Increases 👶
Fusobacterium sp. ACB2 species Increases 👶
Fusobacterium sp. canine oral taxon 189 species Increases 👶
Fusobacterium sp. CM1 species Increases 👶
Fusobacterium sp. CM21 species Increases 👶
Fusobacterium sp. CM22 species Increases 👶
Fusobacterium sp. CM55 species Increases 👶
Fusobacterium sp. DJF_B100 species Increases 👶
Fusobacterium sp. OBRC1 species Increases 👶
Fusobacterium sp. oral taxon 203 species Increases 👶
Fusobacterium sp. RMA 2453 species Increases 👶
Fusobacterium ulcerans species Increases 👶
Fusobacterium varium species Increases 👶 H01466 Ulcerative colitis
Lachnospira eligens species Increases 👶
Pseudomonas aeruginosa group species group Decreases 📓
Pseudomonas chlororaphis group species group Decreases 👶
Pseudomonas fluorescens group species group Decreases 👶
Pseudomonas putida group species group Decreases 👶
Pseudomonas stutzeri group species group Decreases 👶
Pseudomonas syringae group species group Decreases 👶
Pseudomonas oleovorans/pseudoalcaligenes group species subgroup Decreases 👶
Fusobacterium nucleatum subsp. vincentii 3_1_36A2 strain Decreases 📓
Enterococcus faecalis D32 strain Decreases 👶
Enterococcus faecalis EnGen0285 strain Decreases 👶
Enterococcus faecalis V583 strain Decreases 👶 H00340 Vancomycin-resistant enterococci infection
Fusobacterium nucleatum subsp. vincentii 3_1_27 strain Decreases 👶
Fusobacterium nucleatum subsp. vincentii subspecies Decreases 📓
Staphylococcus aureus aureus subspecies Decreases 👶
Fusobacterium nucleatum subsp. nucleatum subspecies Decreases 👪
Fusobacterium nucleatum subsp. polymorphum subspecies Decreases 👪

All suggestions are computed solely on their predicted microbiome impact. Safety, side-effects etc must be evaluated by your medical professionals before starting. Some items suggests have significant risk of adverse consequences for some people.

Special thanks to David F Morrison and Geert Van Houcke for doing Quality Assurance. Special thanks to Oliver Luk, B.Sc. (Biology) from BiomeSight for spot checking the coding of data from the US National Library of Medicine

This is an Academic site. It generates theoretical models of what may benefit a specific microbiome results.

Copyright 2016-2023 Lassesen Consulting, LLC [2007], DBA, Microbiome Prescription. All rights served.
Permission to data scrap or reverse engineer is explicitly denied to all users. U.S. Code Title 18 PART I CHAPTER 47 § 1030, CETS No.185, CFAA
Use of data on this site is prohibited except under written license. There is no charge for individual personal use. Use for any commercial applications or research requires a written license.
Caveat emptor: Analysis and suggestions are based on modelling (and thus infererence) based on studies. The data sources are usually given for those that wish to consider alternative inferences. theories and models.

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