Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank Bacteria BiomeSight
2450 Samples
Thryve
1538 Samples
uBiome
792 Samples
custom
67 Samples
BiomeSightRdp
41 Samples
CosmosId
37 Samples
SequentiaBiotech
36 Samples
Thorne
35 Samples
es-xenogene
35 Samples
Microba
29 Samples
AmericanGut
18 Samples
Medivere
7 Samples
Microba1
3 Samples
GanzimmunDiag
3 Samples
biotype Haemophilus influenzae aegyptius 1
biotype Mycobacterium tuberculosis variant caprae 1
biotype Mycobacterium tuberculosis variant pinnipedii 231
clade 50 kb inversion clade 616 11 1 2 1 3
clade Alveolata 4 1
clade Amniota 1 20 11
clade Amoebozoa 1
clade ant endosymbionts 593 2 11 4 6
clade ant, tsetse, mealybug, aphid, etc. endosymbionts 608 1 2 11 4 6
clade aphid secondary symbionts 26 1 1
clade Archamoebae 1
clade Archelosauria 16 11
clade Archosauria 16 11
clade Asgard group 1
clade asterids 18 25
clade Bacillariophycidae 1
clade Bacteria candidate phyla 200 3 5 35 3
clade Bacteroidetes/Chlorobi group 2450 1538 790 65 40 37 36 35 35 28 18 7 3 3
clade Bilateria 695 8 11 1 25 1 8 5 1
clade Blastocystis sp. subtypes 1
clade Boreoeutheria 1 18 1
clade Caldiserica/Cryosericota group 2 13 7 1
clade campanulids 25
clade candidate division Obsidian Pool 11 6
clade Candidatus Baumannia 3 1
clade Candidatus Dependentiae 7 3
clade Candidatus Peribacteraceae Anantharaman et al. 2016 7
clade Candidatus Uzinura 1
clade Centramoebida 1
clade Coelurosauria 16 11
clade core chlorophytes 1 1
clade core genistoids 616 11 1 2 1 3
clade CRuMs 1
clade CS clade 1
clade CUG-Ser1 clade 1
clade Cyanobacteria/Melainabacteria group 2314 1083 32 7 27 18 35 5 1 7 7 3
clade Deuterostomia 5 1 25 8 1
clade Dicondylia 341 7 11 25 1 4 1
clade Dictyostelia 1
clade Dinosauria 16 11
clade Dipnotetrapodomorpha 5 1 25 11 1
clade Discoba 1
clade Ditrysia 23
clade dothideomyceta 1 1
clade DPANN group 1
clade Duplodnaviria 1 6
clade Ecdysozoa 341 7 11 25 1 5 1
clade Elliptochloris clade 1
clade Embryophyta 621 11 18 25 2 1 3
clade eudicotyledons 621 11 18 25 2 1 3
clade Eumetazoa 719 8 11 1 17 1 8 5 1
clade Euphyllophyta 621 11 18 25 2 1 3
clade Euteleostomi 5 1 25 11 1
clade Eutheria 1 18 1
clade fabids 616 11 1 2 1 3
clade FCB group 2450 1538 790 65 40 37 36 35 35 29 18 7 3 3
clade genistoids sensu lato 616 11 1 2 1 3
clade Gnathostomata 5 1 25 11 1
clade Gunneridae 621 11 18 25 2 1 3
clade Haptista 1
clade Heliantheae alliance 25
clade lamiids 18
clade leotiomyceta 9 1 1
clade lice endosymbionts 1
clade Lophotrochozoa 439 1 1 2
clade Luna-1 subcluster 3 5 1 22 3
clade Mandibulata 341 7 11 25 1 4 1
clade mealybug secondary endosymbionts 1
clade Mesangiospermae 621 11 18 25 2 1 3
clade Metamonada 1 1
clade Methanomada group 619 332 220 32 21 7 16 25 4 11 7 3 3
clade Monodnaviria 25 6 7
clade Nitrospinae/Tectomicrobia group 11 7
clade Obtectomera 23
clade OCC clade 1
clade Ochrophyta 1
clade OM182 clade 1
clade OMG group 1
clade Opalozoa 1
clade Opisthokonta 719 8 11 13 17 1 27 13 13 6
clade OUU clade 1
clade Panarthropoda 341 7 11 25 1 4 1
clade Pancrustacea 341 7 11 25 1 4 1
clade Patescibacteria group 6 1
clade Pentapetalae 621 11 18 25 2 1 3
clade Protostomia 690 8 11 25 1 5 1
clade Prymnesiophyceae 1
clade PVC group 2271 1366 570 29 32 22 29 35 34 12 14 5 2 3
clade PX clade 1
clade Rhizaria 2 2 1
clade Riboviria 1
clade rosids 616 11 1 2 1 3
clade saccharomyceta 13 27 9 6
clade Sar 2 6 2 1
clade SAR116 cluster 1
clade Sauria 16 11
clade Saurischia 16 11
clade Sauropsida 16 11
clade Silicofilosea 1
clade sordariomyceta 9 1
clade Spermatophyta 621 11 18 25 2 1 3
clade Spiralia 439 1 1 2
clade Spirocuta 1
clade Stenosarchaea group 24 8 10 11 12 19
clade Stramenopiles 2 1
clade sulfur-oxidizing symbionts 1 1
clade TACK group 38 9 1 1
clade TCBD clade 1
clade Teleostomi 5 1 25 11 1
clade Terrabacteria group 2450 1538 792 66 40 37 36 35 35 29 18 7 3 3
clade Tetrapoda 5 1 25 11 1
clade Theria 1 18
clade Theropoda 16 11
clade Tracheophyta 621 11 18 25 2 1 3
clade Trypanosoma with unspecified subgenus 1
clade Vertebrata 5 1 25 11 1
class Acidimicrobiia 340 593 2 3 2 32 1 3
class Acidithiobacillia 45 1 33 1
class Acidobacteriia 395 997 111 4 2 35 4 2
class Aconoidasida 4 1
class Actinomycetia 2440 1537 785 50 40 37 35 35 35 24 17 7 2 3
class Agaricomycetes 1 1
class algae 2 2
class Alphaproteobacteria 2385 1461 438 16 40 4 32 35 22 22 7 7
class Amphibia 5 5 1
class Anaerolineae 1014 349 9 1 10 35 4 7
class Anthozoa 36 1
class Aquificae 13 152 3 9 34 4
class Archaeoglobi 1 3 4 2
class Ardenticatenia 29 3 33 1
class Armatimonadia 2 1
class Aves 16 11
class Bacillariophyceae 1
class Bacilli 2450 1538 788 57 40 37 36 35 35 28 18 7 2 3
class Bacteroidia 2450 1538 790 65 40 37 36 35 35 28 18 7 3 3
class Balneolia 91 819 2 3 7 6
class Bangiophyceae 1
class Betaproteobacteria 2439 1520 747 30 40 35 36 35 27 24 18 7 2 3
class Bigyra 1
class Bivalvia 325 1
class Blastocatellia 207 1 1 9 3
class Caldilineae 789 588 2 5 17 3 7
class Caldisericia 2 13 7 1
class Calditrichia 479 15 4 17 1 7
class Candidatus Babeliae 6 3
class Candidatus Brocadiia 21 11 1
class Candidatus Nanoarchaeia 1
class Candidatus Peribacteria 7
class Candidatus Sumerlaeia 2
class Caudoviricetes 1 6
class Cestoda 1
class Chitinispirillia 23 2
class Chitinivibrionia 2
class Chitinophagia 1135 1221 5 1 21 5 35 4 1 6
class Chlamydiia 221 143 1 1 34 1 1
class Chlorobia 2019 109 1 1 25 35 4 2
class Chloroflexia 6 86 2 1 14 35 2
class Chlorophyceae 1 1
class Chloropicophyceae 1
class Choanoflagellata 1
class Chromadorea 1
class Chrysiogenetes 427 24 1 1 21 1
class Chthonomonadetes 6 175 10 3
class Chytridiomycetes 1
class Clostridia 2450 1538 792 64 40 37 36 35 35 28 18 7 3 3
class Compsopogonophyceae 1
class Conoidasida 5 1
class Coprothermobacteria 24 98 7 1
class Coriobacteriia 2431 1532 787 46 40 37 36 35 35 22 18 7 1 3
class Coscinodiscophyceae 1
class Cryptophyceae 1
class Cyanophyceae 1
class Cytophagia 2384 1333 7 4 27 12 35 4 6
class Deferribacteres 671 144 1 5 10 34 4 4
class Dehalococcoidia 128 254 1 1 2 1 34 4
class Deinococci 1524 288 7 1 20 13 35 5 7
class Deltaproteobacteria 2418 1474 648 47 40 23 33 35 34 22 14 7 2 3
class Dictyoglomia 121 2 14 1
class Dinophyceae 1
class Dothideomycetes 1 1
class Elusimicrobia 10 98 7 29 19 1 3 7
class Endomicrobia 22 1
class Epsilonproteobacteria 1382 682 266 29 22 3 10 35 34 7 7
class Erysipelotrichia 2446 1537 786 26 40 36 36 35 29 21 17 7 1
class Euglenida 1
class Eumycetozoa 1
class Eurotiomycetes 9 1 1
class Eustigmatophyceae 1
class Exobasidiomycetes 1
class Faserviricetes 1
class Fibrobacteria 194 296 188 2 32 1
class Fimbriimonadia 7 78 12 2
class Flavobacteriia 2162 790 460 7 33 3 12 35 4 4 2 7
class Florideophyceae 1 10
class Fusobacteriia 1243 818 144 30 7 4 7 35 34 2 2 6 3
class Gammaproteobacteria 2444 1536 721 45 40 35 36 35 34 26 18 7 2 3
class Gastropoda 148 1 1
class Gemmatimonadetes 19 67 1 1 33 15 35 1 7
class Glaucocystophyceae 1
class Gloeobacteria 13 1 1 33 1
class Glomeromycetes 1
class Halobacteria 13 1 1 12 1
class Holophagae 1205 882 2 6
class Hydrogenophilalia 1181 282 6 1 17 5 1
class Ignavibacteria 39 980 2 2 11 16 32 4
class Insecta 341 7 11 25 1 4 1
class Kinetoplastea 1
class Kiritimatiellae 16
class Ktedonobacteria 261 30 1 1 33 3
class Lentisphaeria 404 285 3 6 6 6 34 1 2 5
class Leotiomycetes 1
class Limnochordia 4 27 1
class Magnoliopsida 621 11 18 25 2 1 3
class Malasseziomycetes 1
class Malgrandaviricetes 25 6 7
class Mamiellophyceae 1
class Mammalia 1 18
class Mediophyceae 1
class Methanobacteria 620 332 220 32 21 7 16 25 4 11 7 3 3
class Methanococci 1 11 17
class Methanomicrobia 11 7 10 11 19
class Methylacidiphilae 16 1 4 1
class Mollicutes 2354 1396 167 12 34 1 25 35 5 1 2 6
class Mortierellomycetes 1
class Mucoromycetes 1
class Negativicutes 2449 1538 792 43 40 37 34 35 35 26 17 7 1 3
class Nephroselmidophyceae 1
class Nitriliruptoria 1451 143 3 1 30 1
class Nitrososphaeria 21 1
class Nitrospinia 6 7
class Nitrospira 566 62 1 1 35 4 6
class Oligoflexia 43 139 1 1 1 1 34 4 1
class Oligohymenophorea 1
class Oligosphaeria 54 1
class Opitutae 1475 584 97 2 18 1 1 35 4 4
class Pedinophyceae 1
class Pelagophyceae 1
class Pezizomycetes 1
class Phaeophyceae 1
class Phycisphaerae 2 1 35 4
class Pisoniviricetes 1
class Planctomycetia 33 145 1 1 35 4
class Pucciniomycetes 1
class Raphidophyceae 1
class Rhodellophyceae 1
class Rhodothermia 452 236 1 2
class Rhynchonellata 1
class Rubrobacteria 30 160 3 7 34 3
class Saccharomycetes 13 27 9 6
class Saprospiria 101 237 1 34 4
class Solibacteres 19 1
class Sordariomycetes 9 1
class Spartobacteria 49 69 1
class Sphingobacteriia 2446 797 18 5 39 26 35 4 4 7
class Spirochaetia 1063 260 16 30 7 35 28 1
class Stylonematophyceae 1
class Synergistia 1835 603 236 3 20 3 1 35 10 2 1 7 1
class Synurophyceae 1
class Taphrinomycetes 1
class Tepidiformia 18
class Terrimicrobia 4
class Thermoanaerobaculia 101
class Thermococci 4 1 5 3
class Thermodesulfobacteria 207 89 1 29 1 2
class Thermodesulfovibrionia Umezawa et al. 2021 556 21 1 13 3 6
class Thermoflexia 4
class Thermoleophilia 36 140 1 18 1
class Thermolithobacteria 72
class Thermomicrobia 34 2 30 1
class Thermoplasmata 46 36 11 1 2
class Thermoprotei 10 1
class Thermotogae 79 69 1 35 4 6
class Tissierellia 2429 1490 513 26 35 11 14 35 35 6 8 7
class Trebouxiophyceae 1
class Trematoda 1
class Tremellomycetes 1 1 13
class Ulvophyceae 1
class unclassified Cyanobacteria 1
class Ustilaginomycetes 8 1
class Verrucomicrobiae 2098 1255 496 25 30 22 26 35 34 12 13 3 2 3
class Vicinamibacteria 28 1
class Wallemiomycetes 1
class Zetaproteobacteria 61 1 1 31 1
cohort Endopterygota 23 3
cohort Paraneoptera 336 2 11 25 1
cohort Polyneoptera 7 7 1 1
family 'Hydrogenimonaceae' 1
family 'Williamsiaceae' 3 6
family Acanthamoebidae 1
family Acanthopleuribacteraceae 61
family Acaryochloridaceae 3 4
family Acetobacteraceae 781 444 2 1 7 1 1 35 4 2 3
family Acholeplasmataceae 2202 1053 19 2 9 15 35 5 6
family Acidaminococcaceae 2276 1428 566 33 30 27 22 35 34 18 13 7 1
family Acidiferrobacteraceae 19 33 4
family Acidimicrobiaceae 338 577 2 2 1 3
family Acidithiobacillaceae 45 1 33 1
family Acidobacteriaceae 390 311 87 3 2 35 4 2
family Acidothermaceae 66 4 1
family Acrospermaceae 1
family Actinomycetaceae 1956 1371 635 13 18 30 24 35 15 3 8 7
family Actinopolymorphaceae 152 2 8 1
family Actinopolysporaceae 525 267 6 20 1
family Acytosteliaceae 1
family Aerococcaceae 1032 1264 80 3 16 3 35 4 1 7
family Aeromonadaceae 562 288 7 1 1 1 4 35 4 3 2
family Afifellaceae 2
family Ajellomycetaceae 1
family Akkermansiaceae 2092 1297 790 26 15 34 36 35 34 19 18 4 2 3
family Albuginaceae 1
family Alcaligenaceae 2407 233 6 2 9 10 35 4 1 7
family Alcanivoracaceae 309 26 1 35 1
family Alcidae 11
family Algiphilaceae 48
family Alicyclobacillaceae 6 642 3 6 7 35 4
family Alsobacteraceae 2
family Alteromonadaceae 838 578 1 3 35 4 1 2
family Amaranthaceae 8
family Amoebophilaceae 2232 3 1 18 1 5
family Amphipleuraceae 1
family Anaerohalosphaeraceae 13
family Anaerolineaceae 438 348 8 1 5 35 4
family Anaeromyxobacteraceae 1 683 1 1 35 1
family Anaeroplasmataceae 274 568 128 1 12 3 2 2
family anamorphic Herpotrichiellaceae 1 1
family Anaplasmataceae 684 28 1 2 1 31 4 2
family Anaulaceae 1
family Aphanizomenonaceae 1648 3 14 17 4 7
family Aphanothecaceae 1 8 1 26 1
family Aphididae 4 25
family Aquificaceae 13 102 2 9 20 3
family Archaeoglobaceae 3 4 2
family Archangiaceae 99 94 1 34 1
family Arcobacteraceae Waite et al. 2017 135 22 1 1 34 4 1
family Ardenticatenaceae 29 3 33 1
family Armatimonadaceae 2 1
family Aspergillaceae 9 1 1
family Asteraceae 25
family Atopobiaceae 912 1058 165 11 8 4 10 35 28 3
family Aurantimonadaceae 35 19 1 35 1
family Azonexaceae 201 25 1 1 33
family Azospirillaceae 1250 714 1 1 13 2 35 4 4 2
family Babesiidae 1
family Babyloniidae 3
family Bacillaceae 2270 1191 232 14 39 4 31 35 35 12 7
family Bacillales Family X. Incertae Sedis 2430 842 3 22 7
family Bacillariaceae 1
family Bacillidae 7 6 1 1
family bacterial virus 1
family Bacteriovoracaceae 10 91 1 1 12 1
family Bacteroidaceae 2450 1538 784 62 40 37 35 35 35 28 18 7 3 3
family Baekduiaceae An et al. 2018 15
family Balneatrichaceae 34
family Balneicellaceae 21
family Balneolaceae 91 815 2 3 1 6
family Bangiaceae 1
family Barnesiellaceae 1289 515 16 14 17 11 35 34 18 18 2
family Bartonellaceae 96 15 1 34 4
family Bathycoccaceae 1
family Bdellovibrionaceae 34 10 1 1 33 1 1
family Beijerinckiaceae 80 16 1 33 4
family Berkeleyaceae 1
family Bernardetiaceae 146 2 13 1
family Beutenbergiaceae 23 1
family Bifidobacteriaceae 2421 1527 791 39 39 35 36 35 35 25 18 7 2 3
family Blastocatellaceae 21 1 1
family Blastochloridaceae 9 24 1
family Blastocystidae 2 1
family Blattabacteriaceae 1 32 4
family Bogoriellaceae 31 51 30 6
family Boletaceae 1
family Bondarzewiaceae 1
family Borreliaceae 22 2 9 24 4
family Boseaceae 7 1 1 34 4
family Brachyspiraceae 25 13 1 35 4
family Bradymonadaceae 32 1
family Bradyrhizobiaceae 107 74 11 1 1 35 4 1 1
family Breoghaniaceae 12 1
family Brevibacteriaceae 205 169 60 9 35 33 1 7
family Brevinemataceae 5 1
family Brucellaceae 245 51 25 1 4 4 35 4 1
family Bruguierivoracaceae Li et al. 2021 8 29 1 28 4
family Bryobacteraceae 20 1
family Budviciaceae 308 1 1 29 4 20
family Burkholderiaceae 2172 513 27 6 32 17 35 4 1 3 7
family Caedimonadaceae 1
family Caldicoprobacteraceae 54 237
family Caldilineaceae 789 586 2 5 17 3 7
family Caldisericaceae 1 13 7 1
family Caldisphaeraceae 2
family Calditrichaceae 479 15 4 17 1 7
family Caliciviridae 1
family Callithamniaceae 1
family Calotrichaceae 1011 138 1 5 34 5 6
family Campylobacteraceae 990 575 265 28 12 3 7 35 34 7 7
family Candidatus Babeliaceae 6 3
family Candidatus Brocadiaceae 21 11 1
family Candidatus Competibacteraceae 191 2 1
family Candidatus Desulfofervidaceae 3 1
family Candidatus Fermentimicrarchaeaceae 1
family Candidatus Methanomethylophilaceae 23
family Candidatus Methanoperedenaceae 1
family Candidatus Midichloriaceae 1 1
family Candidatus Nanopelagicaceae 1 33 3
family Candidatus Paracaedibacteraceae 1
family Candidatus Scalinduaceae Lodha et al. 2021 21
family Candidatus Sumerlaeaceae 2
family Canidae 18
family Capillimicrobiaceae 1
family Cardiobacteriaceae 59 183 2 1 29 1
family Carnobacteriaceae 1554 883 326 5 17 13 5 35 5 1 3 7
family Casimicrobiaceae Song et al. 2020 16
family Catabacteriaceae 255 100 8 1 1 1 6
family Catalimonadaceae 69
family Catenulisporaceae 8 13 4
family Caulerpaceae 1
family Caulobacteraceae 1097 221 9 1 20 35 4 4 1
family Cavenderiaceae 1
family Celerinatantimonadaceae 6
family Cellulomonadaceae 182 147 1 4 35 4
family Cellulosilyticaceae 1
family Cellvibrionaceae 184 91 1 35 4
family Cenarchaeaceae DeLong and Preston 1996 9
family Ceramiaceae 1
family Cesiribacteraceae 65
family Chaetocerotaceae 1
family Chaetomiaceae 1
family Chamaesiphonaceae 5 3
family Chattonellaceae 1
family Chelatococcaceae 12 8 19 1
family Chitinispirillaceae 23 2
family Chitinivibrionaceae 2
family Chitinophagaceae 1139 1221 5 1 21 5 35 4 1 6
family Chlamydiaceae 1 2 1 21 1
family Chlamydomonadaceae 1
family Chlorellaceae 1
family Chlorobiaceae 2019 109 1 25 35 4 2
family Chloroflexaceae 14 2 15 2
family Chlorogloeopsidaceae 19
family Chloropicaceae 1
family Chlorosarcinaceae 1
family Christensenellaceae 381 181 3 15 28 24 35 5 2 14 7 1
family Chromatiaceae 2009 738 2 3 17 1 35 4 6
family Chromobacteriaceae 319 143 9 35 12 1
family Chroococcaceae 1012 2 12 1 2
family Chroococcidiopsidaceae 5 1 27 1
family Chrysiogenaceae 431 24 1 1 21 1
family Chrysochromulinaceae 1
family Chthoniobacteraceae 49 12
family Chthonomonadaceae 6 175 10 3
family Clavicipitaceae 1
family Clostridiaceae 2449 1538 789 56 40 37 36 35 35 25 17 7 1 3
family Clostridiales Family XI. Incertae Sedis 217
family Clostridiales Family XVI. Incertae Sedis 1388 92 4 3 31 1 2
family Clostridiales Family XVII. Incertae Sedis 83 206 1 7 1 35 5 2
family Coccidae 271 3
family Coelosphaeriaceae 59
family Cohaesibacteraceae 1 25 1
family Coleofasciculaceae 16 14 16
family Collodictyonidae 1
family Colwelliaceae 4 214 1 2 34 4
family Comamonadaceae 2177 271 112 4 15 3 35 4 9 6
family Compsopogonaceae 1
family Conexibacteraceae 10 8 16
family Coniophoraceae 1
family Coprobacillaceae Verbarg et al. 2014 2422 1238 395 9 28 32 5 8 3 11 7
family Coprothermobacteraceae 24 98 7 1
family Cordycipitaceae 1
family Coriobacteriaceae 2431 1377 783 31 32 28 34 35 35 18 7 3
family Corynebacteriaceae 1215 874 444 22 25 13 8 35 34 7 7 1
family Coxiellaceae 62 51 2 1 25 1 1
family Crenotrichaceae 4
family Criblamydiaceae 45
family Crocinitomicaceae 3 31 1 3 31 1
family Cryomorphaceae 3 144 1 1 1
family Cryphonectriaceae 1
family Cryptococcaceae 13
family Cryptosporangiaceae 3 1
family Cryptosporidiidae 5
family Cucurbitariaceae 1
family Cyanidiaceae 1
family Cyanobacteriaceae 372 47 1
family Cyanobacteriaceae 372 47 16 1
family Cyanobiaceae Salazar et al., 2020 5 8 1 1 35 4
family Cyanophoraceae 1
family Cyanothecaceae 7 1
family Cyclobacteriaceae 390 1 35 4
family Cyphellophoraceae 1
family Cytophagaceae 2264 1065 3 1 5 4 35 4 6
family Dasyaceae 1
family Debaryomycetaceae 10 9
family Deferribacteraceae 676 144 1 5 10 34 4 4
family Defluviitaleaceae 429 18 3 14 3
family Dehalococcoidaceae 128 72 1 1 1 33 1
family Deinococcaceae 1148 188 6 1 11 1 35 5 4
family Demequinaceae 22 84 1
family Dermabacteraceae 448 103 55 1 7 35 5 1
family Dermacoccaceae 19 37 2 1 1 33 1 1
family Dermatophilaceae 2 13 30 1
family Dermocarpellaceae 4 7 1
family Desulfallaceae Watanabe et al. 2020 1091 350 3 1 29 1 7
family Desulfarculaceae 278 5 32 1
family Desulfitobacteriaceae 1
family Desulfobacteraceae 557 859 2 17 7 2 35 15 2
family Desulfobulbaceae 32 244 11 1 35 14
family Desulfocapsaceae 18 17 11 34 6
family Desulfohalobiaceae 404 90 1 16 3 7
family Desulfomicrobiaceae 136 333 11 8 35 25
family Desulfonatronaceae 481 51 2
family Desulfovibrionaceae 2353 1335 648 43 35 23 32 35 34 22 14 7 2 3
family Desulfurellaceae 7 17 4 13 12
family Desulfurobacteriaceae 42 17 1
family Desulfurococcaceae 4
family Desulfuromonadaceae 1218 124 14 11 35 19 5
family Devosiaceae 834 86 4 33 4 1
family Diapheromeridae 1
family Diaporthaceae 1
family Dictyoglomaceae 121 2 14 1
family Dictyosteliaceae 1
family Didymellaceae 1
family Didymosphaeriaceae 1
family Dientamoebidae 1
family Dietziaceae 130 214 2 33 1 7
family Diphyllobothriidae 1
family Dipodascaceae 1
family Dixoniellaceae 1
family Dunaliellaceae 1
family Dysgonomonadaceae 2004 995 46 11 7 4 35 4 2 7
family Ectothiorhodospiraceae 1726 334 1 3 7 35 4 2
family Edwardsiidae 36 1
family Eggerthellaceae 2406 1501 775 46 40 37 35 35 35 22 14 7 1 3
family Egibacteraceae 7 1
family Egicoccaceae 13 1
family Eimeriidae 1
family Elioraeaceae 3
family Elusimicrobiaceae 10 79 7 1 1 3
family Emcibacteraceae 257 5 20
family Endomicrobiaceae 22 1
family Endozoicomonadaceae 6 11 1
family Enterobacteriaceae 2358 938 595 44 40 30 32 35 34 23 17 7 2 3
family Enterococcaceae 2233 534 140 32 30 29 28 35 35 6 11 4 2
family Entomoplasmataceae 1067 126 1 4 29 5 2
family Eriococcidae 1 11
family Erwiniaceae 588 449 177 2 2 4 35 4 11 2
family Erysipelotrichaceae 2446 1537 786 26 39 36 36 35 29 21 17 7 1
family Erythrobacteraceae 207 67 2 1 1 35 4 1
family Erythrotrichiaceae 1
family Eubacteriaceae 2435 1538 301 28 40 37 36 35 32 24 13 7 3
family Eubacteriales Family XII. Incertae Sedis 680 895 18 6 8 6
family Eubacteriales Family XIII. Incertae Sedis 2049 1452 658 8 40 19 31 35 9 3 12 7 1
family Euglenaceae 1
family Euzebyaceae 1450 137 1 1 15 1
family Fabaceae 616 11 1 2 1 3
family Fastidiosibacteraceae 18
family Faucheaceae 10
family Ferrimonadaceae 23 55 27 1
family Ferrovaceae 5 2
family Fervidobacteriaceae 27 1 1 30 4 1
family Fibrobacteraceae 194 276 141 2 32 1
family Filobasidiaceae 1
family Fimbriimonadaceae 7 78 12 2
family Flammeovirgaceae 608 483 1 3 6 33 4
family Flavobacteriaceae 2162 690 457 7 33 1 3 35 4 2 7
family Flexibacteraceae 8 1 12 2
family Fortieaceae 16
family four o'clock family 2
family Francisellaceae 99 91 2 2 35 4 1
family Frankiaceae 5 10 1 34 4
family Fulvivirgaceae 12 209 2 1 27 4
family Fusobacteriaceae 1137 681 121 29 4 4 7 35 34 2 2 6 3
family Gaiellaceae 61 2
family Galaxauraceae 1
family Gallionellaceae 343 32 1 34 1 2
family Geminicoccaceae 99 7
family Geminigeraceae 1
family Gemmataceae 13 16 1 1 35 1
family Gemmatimonadaceae 19 51 1 1 35 1
family Geobacteraceae 148 80 7 6 35 4 1
family Geodermatophilaceae 45 153 1 1 27 4
family Gigartinaceae 1
family Gloeobacteraceae 13 1 1 33 1
family Gloeomargaritaceae 1
family Gloeotrichiaceae 3
family Glomeraceae 1
family Glomerellaceae 1
family Glycomycetaceae 110 189 2 16 1 1
family Gomontiellaceae 113 2 1
family Gomphosphaeriaceae 59
family Gordoniaceae 92 159 1 1 35 5
family Gottschalkiaceae 224 12 3 30 27
family Gracilibacteraceae 717 10 3 7 3
family Granulosicoccaceae 94 26 1
family great apes 1 1
family Gregarinidae 1
family Haematococcaceae 1
family Haemonchidae 1
family Hafniaceae 131 64 14 13 1 2 2 35 13
family Hahellaceae 290 249 2 1 19 3
family Halanaerobiaceae 507 339 1 3 13 35 4 2
family Halieaceae 86 1 34 1
family Halimedaceae 1
family Haliscomenobacteraceae 1 134 17 3
family Haloarculaceae 8 1 1
family Halobacteriaceae 13 1 1 12 1
family Halobacteriaceae Clade I 2 1 1
family Halobacteriovoraceae 9 38 1 24 4
family Halobacteroidaceae 71 557 3 3 29 2 4
family Haloferacaceae 1 1 1
family Halomonadaceae 929 605 4 7 1 2 35 4 3
family Haloplasmataceae 25 1 2
family Halorubraceae 2 1
family Halothiobacillaceae 45 155 2 20
family Hapalidiaceae 1
family Hapalosiphonaceae 12 1
family Helicobacteraceae 734 64 3 26 4 35 33 1
family Heliobacteriaceae 1050 322 2 13 4 35 1 7 5
family Herpetosiphonaceae 2 7
family Hesperiidae 23
family Heteroderidae 1
family Heteroleibleiniaceae 17
family Histionidae 1
family Holophagaceae 1205 835 2 5
family Holosporaceae 1 5 3
family Hoplolaimidae 1
family Hungateiclostridiaceae 592 723 142 1 8 7 35 4 6 6
family Hydrogenophilaceae 1185 281 5 1 17 5 1
family Hydrogenothermaceae 34 1 26 1
family Hyellaceae 3 1
family Hymenobacteraceae 1692 268 2 1 10 35 4 1
family Hymenolepididae 1
family Hyphomicrobiaceae 1159 163 1 9 35 4 1 5
family Hyphomonadaceae 141 863 1 1 5 33 4 3
family Hypocreaceae 1
family Iamiaceae 2 29 19
family Icacinaceae 17
family Ichthyobacteriaceae 1
family Idiomarinaceae 88 49 1 1 24 1
family Ignavibacteriaceae 39 57 1 14 1
family Ilumatobacteraceae 167 19
family Immundisolibacteraceae 12 3
family Intrasporangiaceae 92 96 1 35 4
family Isosphaeraceae 13 5 1 34 4
family Jatrophihabitantaceae 10 11 1
family Jiangellaceae 36 19 23 4 1
family Jonesiaceae 68 122 11
family Kaistiaceae 16 43 1
family Kallotenuaceae 23
family Kangiellaceae 47 13 1
family Kareniaceae 1
family Kiloniellaceae 553 605 2 5
family Kineosporiaceae 38 125 1 11 1
family Kiritimatiellaceae 15
family Kofleriaceae 214 40 5 23 3
family Kordiimonadaceae 259
family Kosmotogaceae 21 6 1 24 1
family Kribbellaceae 144 425 2 9 5
family Ktedonobacteraceae 1
family Ktedonosporobacteraceae 19
family Kytococcaceae 1 1 2 20 1
family Labilitrichaceae 51 19
family Lachnospiraceae 2450 1538 791 61 40 37 36 35 35 28 18 7 3 3
family Lacipirellulaceae 17 21
family Lactobacillaceae 2386 1538 792 32 35 36 36 35 35 15 18 7 3
family Laminariaceae 1
family Laqueidae 1
family Lawsonellaceae 1 33 2
family Legionellaceae 1642 94 1 1 20 35 4 3
family Lentisphaeraceae 4
family Leptolyngbyaceae 551 5 1 1 28 4 2
family Leptosphaeriaceae 1
family Leptospiraceae 653 80 4 2 31 4
family Leptotrichiaceae 263 286 38 2 3 35 4 1
family Leuconostocaceae 1885 1419 102 1 9 3 9 4 8 2 6
family Lewinellaceae 99 11 1
family Lichenihabitantaceae 4 1
family Lichtheimiaceae 1
family Limnochordaceae 4 27 1
family Listeriaceae 1610 368 1 9 3 1 35 12 4 1
family Litoricolaceae 171 59 1 4 3
family Luteibaculaceae Bowman 2020 1
family Magnetococcaceae 23 1 30 1
family Malasseziaceae 1
family Mallomonadaceae 1
family Mamiellaceae 1
family Maricaulaceae 19 47 11 1
family Marinifilaceae 350 1 4 31 4
family Marinilabiliaceae 787 1 11 7 28 1
family Marinobacteraceae Liao et al. 2020 113 222 1 35 4 1
family Mariprofundaceae 61 1 1 31 1
family Marivirgaceae 3 2 4 1
family Mastigamoebidae 1
family Melioribacteraceae 969 2 11 16 3 4
family Merismopediaceae 3 12
family Mesoaciditogaceae 8
family Methanobacteriaceae 620 327 220 32 11 7 3 25 4 11 1 3 3
family Methanocaldococcaceae 1 10 5
family Methanococcaceae 1 11 18
family Methanocorpusculaceae 4 1 1 1
family Methanomassiliicoccaceae 46 31 11 1 2
family Methanomicrobiaceae 1
family Methanoregulaceae 2 1
family Methanosarcinaceae 7 3 11 19
family Methanospirillaceae 1
family Methanotrichaceae 1 1
family Methylacidiphilaceae 16 1 4 1
family Methylobacteriaceae 163 85 4 1 35 4
family Methylococcaceae 11 276 1 3 35 4
family Methylocystaceae 44 32 1 34 4
family Methylophilaceae 1032 350 1 2 34 1 2
family Methylothermaceae 65 1
family Metschnikowiaceae 1
family Microbacteriaceae 805 855 49 2 5 35 5 3 5
family Microbulbiferaceae 10 1 1 35 4
family Micrococcaceae 912 775 151 13 4 22 25 35 26 2 1 6
family Microcoleaceae 539 465 1 1 2 28 5 1
family Microcystaceae 9 2 8 1
family Micromonosporaceae 770 382 1 1 4 35 5 1 6
family Micropepsaceae 15
family Microscillaceae 211 1
family Microviridae 25 6 7
family Miltoncostaeaceae 1
family Monodopsidaceae 1
family Monomastigaceae 1
family Mooreiaceae 11
family Moraxellaceae 1254 684 21 21 24 4 7 35 34 15 5 6
family Morchellaceae 1
family Morganellaceae 362 624 17 24 16 1 17 35 32 1 10 7
family Moritellaceae 1 1 1 13 1
family Mortierellaceae 1
family Motilibacteraceae 11
family Muribaculaceae 2 1 35 4 2
family Mychonastaceae 1
family Mycobacteriaceae 391 130 59 1 7 2 35 5 1
family Mycoplasmataceae 2041 1110 11 10 24 6 35 5 1 5
family Mycoplasmoidaceae 145 5 1
family Mycosphaerellaceae 1
family Myoviridae 1 6
family Mytilinidiaceae 1
family Myxococcaceae 3 4 1 35 4
family Mzabimycetaceae 208
family Nakamurellaceae 2 1 32 4
family Nannocystaceae 146 28 1
family Nanopusillaceae 1
family Natranaerobiaceae 62 10 1
family Nautiliaceae 5 50 1 2 30 1
family Nectriaceae 8 1
family Neisseriaceae 759 235 68 2 16 5 10 35 4 3 3 7 2
family Neomegalonemataceae 30 1
family Nephroselmidaceae 1
family Nitratiruptoraceae Waite et al. 2017 2 1
family Nitriliruptoraceae 7 6 2
family Nitrosomonadaceae 29 411 8 3 3 4 34 4
family Nitrosopumilaceae 6 8 1 1
family Nitrososphaeraceae 21 1
family Nitrospinaceae 6 7
family Nitrospiraceae 566 62 1 1 35 4 5
family Nocardiaceae 297 46 21 1 2 35 5 1
family Nocardioidaceae 362 564 1 2 35 5 6
family Nocardiopsaceae 2 451 1 1 34 4 2
family Noelaerhabdaceae 1
family Nostocaceae 2094 5 1 17 2 34 5 7
family Oceanospirillaceae 599 441 1 35 4 1
family Oculatellaceae 5 6
family Odoribacteraceae 2288 1410 621 36 33 29 33 35 35 24 16 7 2 3
family Oedogoniaceae 1
family Oleiphilaceae 4 3
family Oligoflexaceae 1
family Oligosphaeraceae 54
family Onchocercidae 1
family Ophiostomataceae 1
family Opitutaceae 28 54 1 1 1 35 4
family Orbaceae 16 1 27 4
family Ornithinimicrobiaceae 48 21 1 30 4
family Oscillatoriaceae 1164 155 18 4
family Oscillochloridaceae 2 1
family Oscillospiraceae 2450 1538 788 51 40 37 36 35 35 27 18 7 3 3
family Ostreobiaceae 1
family Oxalobacteraceae 1517 644 259 12 20 4 25 35 26 8 7 3
family Paenibacillaceae 1965 1333 1 4 26 29 35 5 6 7
family Palmariaceae 1
family Paludibacteraceae 9 166 1 2 2 3 33 4 2
family Parachlamydiaceae 5 5 12 1
family Parameciidae 1
family Parodontellaceae 1
family Parvibaculaceae 1 9 13 4
family Parvoviridae 2
family Parvularculaceae 32 1
family Pasteurellaceae 1992 1183 549 14 28 21 29 35 8 12 17 7
family Pasteuriaceae 97 7
family Patulibacteraceae 3 7
family Paulinellidae 1
family Pectobacteriaceae 111 522 2 1 1 1 35 4 3
family Pelagibacteraceae 6 1 26 1
family Peptococcaceae 2421 1458 521 28 27 7 24 35 31 9 7
family Peptoniphilaceae 2378 1443 506 23 33 9 7 35 33 6 8 7
family Peptostreptococcaceae 2159 1533 790 48 31 35 30 35 28 13 15 7 1 3
family Perlucidibacaceae Liao et al. 2020 3
family Peronosporaceae 1
family Persicobacteraceae 1 120 1 4
family Petrotogaceae 32 47 1 25 4 6
family Peyssonneliaceae 1
family Pezizaceae 1
family Phaeodactylaceae 1
family Phaffomycetaceae 1
family phages with long non-contractile tails 1
family Phakopsoraceae 1
family Phanerochaetaceae 1
family Phreatobacteraceae 1 31 1
family Phycisphaeraceae 2 22 1
family Phycomycetaceae 1
family Phyllobacteriaceae 73 48 35 5 35 5 1
family Pirellulaceae Dedysh et al. 2020 7 58 28 1
family Piscirickettsiaceae 323 456 2 3 35 4 1
family Planctomycetaceae 17 137 1 35 1
family Planococcaceae 1243 1313 39 10 40 22 35 19 6 7
family Plasmodiidae 4 1
family Plectosphaerellaceae 1
family Pleioneaceae 4
family Pleomorphomonadaceae 8 11 19 1
family Pleosporaceae 1
family Polyangiaceae 101 13 1 1 1 35 4
family Polyporaceae 1
family Porphyromonadaceae 2432 1520 525 13 34 25 35 35 27 4 10 7 2
family Porticoccaceae 2
family Prevotellaceae 2405 1520 570 44 40 18 21 35 35 3 17 7 1 3
family Prochloraceae 2 2 1 35 4
family Prochlorococcaceae 1
family Prochlorotrichaceae 8 15 3
family Prolixibacteraceae 223 1 4 35 1
family Promicromonosporaceae 7 91 33 5 4 1
family Propionibacteriaceae 77 718 118 9 4 9 13 35 26 4
family Proteidae 5 5 1
family Proteinivoraceae 1935 661 7 13 7
family Pseudanabaenaceae 694 8 2 11 4 2
family Pseudoalteromonadaceae 50 58 1 35 4 1
family Pseudococcidae 79 2 1
family Pseudomonadaceae 740 562 51 27 5 2 9 35 34 11 5
family Pseudonocardiaceae 692 488 1 4 35 4 4
family Pseudoxanthobacteraceae 5
family Psychromonadaceae 28 51 10 4
family Pucciniaceae 1
family Punctulariaceae 1
family Puniceicoccaceae 1467 565 7 1 18 15 1 4
family Pycnococcaceae 1
family Pyrenomonadaceae 1
family Pyrinomonadaceae 49
family Rarobacteraceae 80
family Reichenbachiellaceae 64
family Reyranellaceae 5
family Rhabditidae 1
family Rhabdochlamydiaceae 196
family Rhizobiaceae 690 116 8 9 3 14 35 16 1 7
family Rhizopodaceae 1
family Rhodanobacteraceae 1652 267 1 8 35 4 3
family Rhodobacteraceae 517 365 4 1 5 1 4 35 4 1 7
family Rhodobiaceae 6 18 3 32 4
family Rhodocyclaceae 1495 492 71 1 1 34 1 1
family Rhodomelaceae 1
family Rhodospirillaceae 2019 1092 371 5 33 25 35 4 22 7
family Rhodothalassiaceae 27 16 1
family Rhodothermaceae 2277 249 2 12 6 35 4 1
family Rhodovibrionaceae 493 531 13 1
family Rickettsiaceae 1273 282 1 15 31 4 6
family Rikenellaceae 60 1492 735 53 15 36 35 35 35 26 18 7 3 3
family Rivulariaceae 1092 139 3 4 6
family Robiginitomaculaceae 51 2
family Roseiarcaceae 5
family Roseiflexaceae 2 17 27 1
family Roseivirgaceae 1 67 6
family Roseobacteraceae Pujalte et al. 2014 147 95 1 1 35 4 2
family Ruaniaceae 1 27
family Rubricoccaceae 13
family Rubritaleaceae 826 228 9 8
family Rubrobacteraceae 30 111 3 7 34 3
family Ruminococcaceae 2450 1538 788 3 40 28 36 4 28 18 7 2
family Saccharomycetaceae 13 9 5
family Saccharospirillaceae 63 529 1 26 1
family Salinibacteraceae 4
family Salinisphaeraceae 24 7 1
family Salinivirgaceae 13 1
family Salisaetaceae 452 221 1 4
family Salpingoecidae 1
family Sandaracinaceae 18 16 1
family Sanguibacteraceae 9 5 24 1 1
family Saprospiraceae 101 96 28 1
family Sarcocystidae 1
family Schistosomatidae 1
family Schleiferiaceae 35 14 1
family Sclerotiniaceae 1
family Scolopacidae 16
family Scytonemataceae 28 4 4
family Sedimentisphaeraceae 1 27 3
family Segniliparaceae 52 2 12 1
family Selenastraceae 1
family Selenomonadaceae 2422 870 98 16 29 5 12 35 34 1 7
family Shewanellaceae 1525 190 28 16 35 32 5
family Silvanigrellaceae 3
family Simkaniaceae 12 3 1
family Sinobacteraceae 1849 186 2 1 19 34 1
family Sneathiellaceae 13
family Solanaceae 11
family Solibacteraceae 6 1 1
family Solirubrobacteraceae 23 28
family Sordariaceae 1
family Sphaerobacteraceae 30 1 26
family Sphaerochaetaceae 4 2 1 34 1
family Sphingobacteriaceae 2443 797 4 5 39 24 35 4 4 7
family Sphingomonadaceae 926 778 17 2 16 14 35 4 1 6
family Sphingosinicellaceae 20 1 17 4
family Spirillaceae 5 14
family Spirochaetaceae 582 177 1 3 35 4 1
family Spiroplasmataceae 573 1 6 34 5
family Spirosomaceae 1980 906 3 11 2 34 4 6
family Spirulinaceae 12
family Spongiibacteraceae 248 1 14 1
family Sporichthyaceae 12 22 18
family Sporolactobacillaceae 723 230 2 33 1 1
family Sporomusaceae 1667 1075 34 3 5 35 4 7
family Staphylinidae 5 3
family Staphylococcaceae 1849 449 207 32 17 3 3 35 35 6 5 5
family Stappiaceae 4 1 35 4
family Stellaceae 292 2 34
family Stereaceae 1
family Steroidobacteraceae 27 45 17
family Sterolibacteriaceae 387 69 11 1 2 35 4
family Streptococcaceae 2428 1535 776 39 40 36 36 35 35 24 16 7 2 3
family Streptomycetaceae 476 390 9 2 35 35 2 6
family Streptosporangiaceae 1021 228 1 11 35 2 2
family Strongyloididae 1
family Stylonemataceae 1
family Succinivibrionaceae 688 338 15 9 2 2 34 21 3
family Suillaceae 1
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family Sulfuricellaceae Watanabe et al. 2014 6 1 33 1
family Sulfurovaceae Waite et al. 2017 5 1 33 1
family Sutterellaceae 2406 1473 713 21 40 33 36 34 3 23 18 7 1 3
family Symbiobacteriaceae 1551 423 3 7 35 3
family Synchytriaceae 1
family Synechococcaceae 697 13 1 1 35 5
family Synergistaceae 1819 603 236 3 20 3 1 35 10 2 1 7 1
family Syntrophaceae 327 82 1 1 30 4 1
family Syntrophobacteraceae 742 474 2 20 30 1 2
family Syntrophomonadaceae 2046 747 11 3 4 33 4 5
family Syntrophorhabdaceae 31 1
family Syntrophotaleaceae 44 3 27 2
family Tannerellaceae 2423 1486 720 46 34 37 34 35 35 22 18 7 2 3
family Taphrinaceae 1
family Temperatibacteraceae 1
family Tenuifilaceae Podosokorskaya et al. 2020 27
family Tepidamorphaceae 6
family Tepidanaerobacteraceae 875 17 1 33 2 2
family Tepidiformaceae 18
family Tepidimicrobiaceae 1
family Terasakiellaceae 6 9 1
family Terrimicrobiaceae 4
family Thalassobaculaceae 113 3 7
family Thalassospiraceae 553 54 359 6 26 1
family Thermaceae 853 88 1 1 3 35 5 5
family Thermoactinomycetaceae 1585 831 1 4 9 35 4 6
family Thermoanaerobacteraceae 2114 459 213 4 29 35 5 4
family Thermoanaerobacterales Family III. Incertae Sedis 2371 236 23 32 1 35 31 7
family Thermoanaerobacterales Family IV. Incertae Sedis 40 1 27
family Thermoanaerobaculaceae 101
family Thermococcaceae 4 1 5 3
family Thermodesulfobacteriaceae 207 89 1 29 1 2
family Thermodesulfobiaceae 24 124 17 2 2 5 6 1
family Thermodesulfovibrionaceae 556 21 1 13 3 6
family Thermoflexaceae 4
family Thermoflexibacteraceae 127
family Thermogemmatisporaceae 261 7 1 25 3
family Thermoguttaceae Dedysh et al. 2020 44 1 1
family Thermohalobacteraceae Spring 2020 1254 4 8 4 33
family Thermoleophilaceae 74 1
family Thermolithobacteraceae 72
family Thermomicrobiaceae 3 1
family Thermomonosporaceae 774 89 1 9 35 4 3
family Thermonemataceae 51 4
family Thermoplasmataceae 1
family Thermoproteaceae 2
family Thermosediminibacteraceae 147 75 5 21 1 6
family Thermosporotrichaceae 23 12
family Thermosynechococcaceae 15 2
family Thermotogaceae 79 2 1 28 4 6
family Thermotomaculaceae 18 1
family Thioalkalibacteraceae 28 1 18
family Thioalkalispiraceae 69 1 29 3
family Thiobacillaceae 418 63 6 1 31 1 1
family Thiofilaceae 5
family Thiolinaceae 2
family Thioprofundaceae 12
family Thiotrichaceae 1714 109 1 23 25 1 3 3
family Thiovulaceae Waite et al. 2017 15 12 1 33 3
family Thorselliaceae 77
family Tissierellaceae 125 787 1 25 10 2 2 35 28 3
family Trebouxiaceae 1
family Treponemataceae 579 83 27 6 35 28 1
family Trichocoleusaceae 3
family Trichocomaceae 1 1
family Trichomonadidae 1
family Trichomonascaceae 1
family Trichosporonaceae 1
family Trichostrongylidae 1
family Tropherymataceae 92 1
family Trueperaceae 28 21
family Trypanosomatidae 1
family Tsukamurellaceae 140 11 28 4 1
family Tuberaceae 1
family Tulasnellaceae 1
family Turicibacteraceae Verbarg et al. 2014 1633 963 476 6 22 19 8 35 5 3 11 5
family Ulvaceae 1
family unclassified Actinobacteria (class) (miscellaneous) 4 1
family unclassified Bacillales 19 40
family unclassified Burkholderiales 200 198 18 15 13 4 3 3
family unclassified Clostridiales 716 783 9 8 34 35 2 5 3 1 1
family unclassified Rickettsiales 4
family Unionidae 325 1
family Uronemataceae 1
family Ustilaginaceae 8 1
family Vacuolariaceae 1
family Vallitaleaceae Quemeneur et al. 104 4 14 3 34 2
family Veillonellaceae 2449 1531 744 22 32 32 32 35 34 14 16 7 3
family Verrucomicrobia subdivision 3 24 31 2
family Verrucomicrobiaceae 2095 283 221 3 8 33 1 1 3
family Vibrionaceae 157 147 7 35 4 4
family Vicinamibacteraceae 28 1
family Victivallaceae 399 285 2 6 6 6 5
family Viviparidae 145 1 1
family Volvocaceae 1
family Vulgatibacteraceae 22
family Waddliaceae 20 1
family Wallemiaceae 1
family Weeksellaceae 191 142 9 1 1 35 4 2 6
family Wenzhouxiangellaceae 54 6 1
family Woeseiaceae 7 1
family Xanthobacteraceae 46 21 1 1 34 1 6
family Xanthomonadaceae 1994 408 19 4 16 35 4 1 7 6
family Xenococcaceae 5
family Yersiniaceae 1851 221 20 28 16 2 6 35 24 13
family Zoogloeaceae 611 196 1 1 3 1 35 4 2 3
family Zymomonadaceae 1 1 8 29 14
forma Volvox carteri f. nagariensis 1
forma specialis Buchnera aphidicola (Acyrthosiphon kondoi) 1
forma specialis Buchnera aphidicola (Acyrthosiphon pisum) 2
forma specialis Buchnera aphidicola (Aphis glycines) 1
forma specialis Buchnera aphidicola (Cinara cedri) 1
forma specialis Buchnera aphidicola (Cinara confinis) 1
forma specialis Buchnera aphidicola (Cinara pseudotaxifoliae) 1
forma specialis Buchnera aphidicola (Cinara tujafilina) 1
forma specialis Buchnera aphidicola (Diuraphis noxia) 1
forma specialis Buchnera aphidicola (Myzus persicae) 4
forma specialis Buchnera aphidicola (Schizaphis graminum) 1
forma specialis Buchnera aphidicola (Schlechtendalia chinensis) 1
forma specialis Buchnera aphidicola (Tuberolachnus salignus) 1
forma specialis Buchnera aphidicola (Uroleucon ambrosiae) 1
forma specialis cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 1
forma specialis endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 1
forma specialis primary endosymbiont of Heteropsylla cubana 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans 4
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 3
genus 'Grimontella' 1
genus 'Haloanella' 2
genus 'Kouleothrix' 2
genus 'Terrahaemophilus' 1
genus Abiotrophia 148 180 9 2 2 3 26
genus Absiella 397 516 1 6 13 1
genus Abyssicoccus 14
genus Abyssivirga 1
genus Acanthamoeba 1
genus Acanthopleuribacter 61
genus Acaryochloris 3 4
genus Accumulibacter 31 3
genus Acetanaerobacterium 767 123 3 9 1
genus Acetatifactor 1415 2 8 9 1
genus Acetilactobacillus 8 3
genus Acetitomaculum 1073 138 3 3 1
genus Acetivibrio 2414 1436 32 9 14 2 26 35 5 7
genus Acetoanaerobium 854 4 12 35 2
genus Acetobacter 20 23 1 1 35 3 2
genus Acetobacterium 2405 676 4 36 2 35 4 7
genus Acetobacteroides 362
genus Acetohalobium 52 5 1 26 2
genus Acetomicrobium 26 55 1
genus Acetonema 366 2 2
genus Acholeplasma 1716 1052 6 2 6 1 35 5 3
genus Achromatium 29
genus Achromobacter 191 1 1 2 9 35 4 2
genus Acidaminobacter 588 496 3 6 3
genus Acidaminococcus 1754 795 96 13 14 1 4 35 28 1 5 3
genus Acidianus 1 1
genus Acidibacter 47
genus Acidibrevibacterium 3 1
genus Acidicaldus 3
genus Acidicapsa 81 1
genus Acidiferrobacter 11 4 3
genus Acidihalobacter 1 33 1
genus Acidimicrobium 294 3 2 1 1
genus Acidiphilium 53 3 14 1 1 1
genus Acidipropionibacterium 25 1 5 34 13
genus Acidisarcina Belova et al. 2018 5
genus Acidisoma 11
genus Acidisphaera 1 1
genus Aciditerrimonas 264 2
genus Acidithiobacillus 45 1 33 1
genus Acidobacterium 1 22 3
genus Acidocella 6 3
genus Acidothermus 66 4 1
genus Acidovorax 124 43 1 1 1 35 4 1 4
genus Acinetobacter 522 358 16 21 1 4 6 35 34 15 5 4
genus Acrocarpospora 4
genus Actibacter 1
genus Actibacterium 5 1
genus Actimicrobium 7
genus Actinoallomurus 3 1
genus Actinoalloteichus 2 25 4
genus Actinobacillus 1361 354 90 4 13 7 33 4 5
genus Actinobaculum 184 11 17 7 20 1 2
genus Actinocatenispora 671 179 3
genus Actinocorallia 4 4 2
genus Actinokineospora 5 3
genus Actinomadura 55 51 1 32 1 2
genus Actinomyces 1779 1217 580 5 15 29 10 35 5 5 7
genus Actinomycetospora 13 2
genus Actinoplanes 24 130 1 35 4
genus Actinopolymorpha 152 2 8 1
genus Actinopolyspora 525 264 6 20 1
genus Actinorugispora 1
genus Actinosynnema 11 1
genus Actinotalea 2 9
genus Actinotignum 37 95 29 3 28
genus Acutalibacter 14
genus Adhaeribacter 12 41 7
genus Adlercreutzia 1811 538 19 17 28 5 35 31 1 6 6
genus Advenella 8 1 26 3
genus Aequorivita 3 9 2 12 1
genus Aeribacillus 31 1 1
genus Aeriscardovia 226
genus Aerococcus 36 463 16 1 7 35 4
genus Aeromicrobium 30 3 1 33 1 3
genus Aeromonas 176 7 1 1 4 35 4
genus Aerosphaera 48
genus Aerosticca Watanabe et al. 2020 6 3
genus Aestuariibacter 2
genus Aestuariicola 3
genus Aestuariispira 602 2
genus Afifella 2
genus Afipia 6 1 5 3
genus Agaribacter 343
genus Agarilytica 1
genus Agarivorans 23 1
genus Agathobacter 1 8 1
genus Agathobaculum 1505 1 14 15 32 8
genus Aggregatibacter 634 261 172 6 14 3 2 33 1 1 5
genus Aggregicoccus 1
genus Agreia 2
genus Agrilactobacillus 176 3
genus Agrobacterium 108 1 35 4
genus Agrococcus 50 2 3 1 25 1
genus Agromyces 428 184 1 2 30 1 1
genus Ahniella 1
genus Ahrensia 1
genus Akkermansia 2092 1297 790 26 15 34 36 35 34 19 18 4 2 3
genus Albibacterium 1
genus Albidovulum 1 1
genus Albimonas 9
genus Albugo 1
genus Alca 11
genus Alcaligenes 15 2 1 33 3
genus Alcanivorax 309 12 1 35 1
genus Algibacter 1 3 13 1
genus Algicola 56
genus Algimonas 17 2
genus Algiphilus 48
genus Algivirga 4
genus Algorimarina 2
genus Algoriphagus 135 1 18 3
genus Aliarcobacter 84 4 1 6 4 1
genus Alicycliphilus 11 5 15 1 3
genus Alicyclobacillus 6 222 3 4 3 32 3
genus Alienimonas Boersma et al. 2020 11
genus Aliicoccus 3
genus Aliidiomarina 26
genus Aliifodinibius 255
genus Aliihoeflea 1
genus Aliivibrio 1 16 1
genus Alishewanella 438 80 2 2
genus Alistipes 1490 735 52 15 36 33 35 35 26 11 7 3 3
genus Alkalibacillus 178 5
genus Alkalibacter 158 2 3
genus Alkalibacterium 821 9 1 4 1 7
genus Alkalibaculum 384 1 2
genus Alkalicoccus 56
genus Alkaliflexus 77 3
genus Alkalihalobacillus 33 52 8 1 35 6
genus Alkalilimnicola 25 1
genus Alkalimarinus 17
genus Alkalimicrobium 5
genus Alkaliphilus 2393 456 7 24 4 35 5 7
genus Alkalispirillum 1
genus Alkalispirochaeta 1
genus Alkalitalea 28 1
genus Alkanibacter 1
genus Alkanindiges 17 3
genus Allisonella 294 68 5 2 3
genus Alloactinosynnema 12 4
genus Allobacillus 2
genus Allobaculum 184 245 8 2 2
genus Allocatelliglobosispora 2
genus Allochromatium 120 16 1
genus Allofrancisella 6 4 1
genus Allofustis 28 2 2
genus Allohahella 287 119 2
genus Alloiococcus 4 131 1
genus Allokutzneria 1 17 1
genus Allomeiothermus 1
genus Alloprevotella 14 631 83 7 1 2 35 1
genus Allopseudarcicella 3
genus Alloscardovia 161 236 19 2 4
genus Allosphingosinicella 15 3
genus Alsobacter 2
genus Alteracholeplasma 45 69 1 12 1 1
genus Altererythrobacter 23 2 1 35 4
genus Alteribacillus 6
genus Alteribacter 15
genus Alterileibacterium 11 2
genus Alternaria 1
genus Alterococcus 33 1
genus Alteromonas 1 36 1 35 4
genus Altibacter 3
genus Alysiella 4
genus Amaricoccus 100 3 2
genus Amedibacillus 1655 563 1 6 12 1 3 2
genus Amedibacterium 1 35 1
genus Aminicella 967 1
genus Aminiphilus 262 5 5
genus Aminipila 1 1 35 5
genus Aminivibrio 78
genus Aminobacter 23 1 4 25 2
genus Aminobacterium 115 26 4 7 1
genus Aminomonas 71 4
genus Ammonifex 869 7 1 21
genus Ammoniphilus 100 58
genus Amoebophilus 2232 3 1 2 1 5
genus Amphibacillus 50 21 4
genus Amphritea 61 5
genus Amycolatopsis 36 7 1 35 4 1
genus Amylibacter 5
genus Amylolactobacillus 2
genus Anabaena 2 3
genus Anabaenopsis 1
genus Anaerobacillus 567 3 20
genus Anaerobacter 59
genus Anaerobacterium 55 47 1 4 3
genus Anaerobiospirillum 16 46 2 10
genus Anaerobium 484 1 14 19
genus Anaerobranca 1937 634 5 11 7
genus Anaerobutyricum 1457 1 20 14 32 32 35 23 22
genus Anaerocella 198
genus Anaerococcus 1096 883 374 5 17 1 5 35 5 3 5
genus Anaerocolumna 1281 33 10 8 35 15
genus Anaerofilum 2414 884 249 2 40 5 8 7
genus Anaerofustis 601 1041 205 11 9
genus Anaeroglobus 854 14 11
genus Anaerohalosphaera 13
genus Anaerolinea 196 116 4 1 2 10 1
genus Anaeromassilibacillus 1 11 9 4
genus Anaeromicropila 1
genus Anaeromusa 216 29 2
genus Anaeromyxobacter 1 683 1 1 35 1
genus Anaerophaga 18 1
genus Anaeroplasma 274 221 48 9 1 2
genus Anaerorhabdus 38
genus Anaerosacchariphilus 1 13
genus Anaerosalibacter 355 5
genus Anaerosinus 70 34 2
genus Anaerosphaera 152 2 5
genus Anaerospora 4 301
genus Anaerosporobacter 854 552 1 1 5
genus Anaerostipes 2171 1527 780 29 40 37 36 35 35 25 12 7 1
genus Anaerotaenia 1 3
genus Anaerotignum 1464 10 15 7 21 35 4 4
genus Anaerotruncus 2362 1260 732 18 24 22 29 1 2 7 7 1 3
genus Anaerovibrio 2213 24 9 3 10 1 1
genus Anaerovirgula 1
genus Anaerovorax 98 277 1 3 13
genus Anaplasma 10 4 1
genus Ancylobacter 14 15
genus Anderseniella 1 5 4
genus Andreesenia 29
genus Andreprevotia 1
genus Aneurinibacillus 6 78 1 31 2
genus Angelakisella 7 21
genus Annandia 2
genus Annwoodia 1
genus Anoxybacillus 175 60 3 1 1 32 1 1 1
genus Anoxybacter 1 6 30 4
genus Anoxynatronum 933 3
genus Anseongella 1 21
genus Antarcticibacterium 17
genus Antarctobacter 6 1
genus Anthracocystis 1
genus Apibacter 1 27 1
genus Apilactobacillus 14 5 3
genus Apiotrichum 1
genus Aquabacterium 11 82 5 1 17 1
genus Aquamicrobium 21
genus Aquaspirillum 51 19
genus Aquibacter 9 1
genus Aquicella 5 11 8
genus Aquiflexum 11 6 1
genus Aquihabitans 24
genus Aquiluna 4 15
genus Aquimarina 8 49 1 29 4
genus Aquimonas 17 20
genus Aquincola 9
genus Aquipuribacter 6
genus Aquirhabdus 1
genus Aquisalibacillus 3
genus Aquisalimonas 73
genus Aquisphaera 2 23
genus Aquitalea 25 7 1 34 4
genus Arabia 1 1 1 35 1
genus Arachidicoccus 1 32 3
genus Arachnia 1 1 1 2 33
genus Arcanobacterium 94 41 31 1 1 34 2
genus Archaeoglobus 3 4 2
genus Archangium 12 22 1
genus Arcicella 2 134 2
genus Arcobacter 135 22 1 1 34 4 1
genus Arcobacter group 79 19 1 1 32 4 1
genus Arcticibacterium 1 1
genus Ardenticatena 29 2
genus Arenibacter 4 2 3 3
genus Arenimonas 10 41 2
genus Arhodomonas 16
genus Aridibacter 21
genus Armatimonas 2 1
genus Aromatoleum 16 1
genus Arsenicicoccus 5 8 13 1
genus Arsenophonus 43 33 12 1
genus Arthrobacter 286 11 10 1 2 1 35 5 2 1
genus Arthromitus 1 31 4
genus Arthronema 12 1
genus Arthrospira 29 8 1 3 1 1
genus Asaccharobacter 11 1 7
genus Asaccharospora 99 1
genus Asaia 4 11 1
genus Asinibacterium 11
genus Aspergillus 9 1 1
genus Asteroleplasma 419 73 3 1
genus Asticcacaulis 891 86 15 20 1 1
genus Atelocyanobacterium 1
genus Atlantibacter 8 1
genus Atopobacter 10
genus Atopobium 839 604 98 5 3 3 10 1 3
genus Atopococcus 27
genus Atopomonas 6
genus Atopostipes 108 2
genus Aurantiacibacter 21 8 1
genus Aurantimicrobium 21 1
genus Aurantimonas 33
genus Auraticoccus 3 5 3
genus Aureibacter 13
genus Aureicoccus 1
genus Aureimonas 8 30 1
genus Aureispira 1
genus Aureitalea 1 3
genus Aureococcus 1
genus Auricoccus 1
genus Auritidibacter 16 1
genus Austwickia 11 1
genus Auxenochlorella 1
genus Avibacterium 274 92 2 8 1 4
genus Azoarcus 148 4 1 1 35 1
genus Azohydromonas 10 2
genus Azomonas 7
genus Azonexus 21 1
genus Azorhizobium 7 2 16
genus Azorhizophilus 7
genus Azospira 15 7 9 1 31 1
genus Azospirillum 475 408 1 13 2 35 4 4 2
genus Azotobacter 4 28 1
genus Babela 6 2
genus Babesia 1
genus Bacillus 7 6 1 1
genus Bacillus 1713 676 66 11 28 1 27 35 35 8 6
genus Bacteria 1
genus Bacterioplanes 1 1
genus Bacteriovorax 10 80 1 12
genus Bacteroides 2450 1538 784 62 40 37 35 35 35 28 18 7 3 3
genus Baekduia An et al. 2018 15
genus Baia 94
genus Balneatrix 34
genus Balneola 91 382
genus Bariatricus 3 1 1
genus Barnesiella 1181 414 15 14 14 4 35 34 16 2 2
genus Barrientosiimonas 33
genus Bartonella 96 15 1 34 4
genus Basfia 8 1 5 1
genus Basilea 5 1
genus Bathycoccus 1
genus Bdellovibrio 34 10 1 1 33 1 1
genus Beauveria 1
genus Beduini 1 1
genus Beggiatoa 3 1 1
genus Beijerinckia 5 3 1
genus Belliella 24 6 3
genus Bellilinea 7 1
genus Belnapia 4 1
genus Bergeyella 34 5 2
genus Berkeleya 1
genus Bermanella 2
genus Bernardetia 116 13 1
genus Berryella Wylensek et al. 2020 1 3 35 1
genus Besnoitia 1
genus Beutenbergia 7 1
genus Bhargavaea 13
genus Bibersteinia 4 1 8 1
genus Bifidobacterium 2417 1509 791 39 39 35 36 35 35 19 18 6 2 3
genus Bigelowiella 2 2
genus Bilophila 2218 117 607 20 34 23 32 26 1 21 14 7 2 3
genus Biomaibacter 33 2
genus Biostraticola 29
genus Bisgaardia 121 1 9
genus Bittarella 3 8 8
genus Bizionia 2 2
genus Blastocatella 1
genus Blastochloris 9 24 1
genus Blastococcus 20 1 1 3 1
genus Blastocystis 2 1
genus Blastomonas 16 13 1
genus Blastomyces 1
genus Blastopirellula 17
genus Blattabacterium 1 32 4
genus Blautia 2450 1538 789 60 40 36 36 35 35 28 18 7 3 3
genus Blochmannia 600 2 11 4 6
genus Bogoriella 12
genus Bombilactobacillus 147 7
genus Bombiscardovia 19 21
genus Bordetella 53 1 35 4
genus Borrelia 22 2 19 4
genus Borreliella 8 11 4
genus Bosea 7 1 1 34 4
genus Bosea 8
genus Boseongicola 2 12
genus Botrytis 8 1
genus Boudabousia 19
genus Bounagaea 1
genus Bowdeniella 27
genus Bowmanella 72
genus Brachybacterium 405 29 5 1 7 35 1
genus Brachymonas 4
genus Brachyspira 25 13 1 35 4
genus Brackiella 7
genus Bradymonas 17 1
genus Bradyrhizobium 66 2 10 1 35 4 1
genus Brassicibacter 1106 3 5 4
genus Bremerella Rensink et al. 2020 3
genus Brenneria 84 495 1 28 1 3
genus Breoghania 12 1
genus Brevefilum 14 1
genus Brevibacillus 253 144 1 5 1 35 5 1
genus Brevibacterium 205 167 60 9 35 33 1 7
genus Brevifollis 32
genus Brevinema 5 1
genus Brevirhabdus 11 1
genus Brevundimonas 56 48 7 1 2 35 4 3
genus Breznakia 8
genus Breznakibacter 21 7
genus Brochothrix 1462 78 1 1 23 1 1
genus Brockia 32
genus Brucella 17 1 4 1 32 2
genus Bryobacter 7
genus Bryocella 1
genus Buchnera 1 35 4
genus Bulboplastis 1
genus Bulleidia 480 99 2 3 1 5
genus Burkholderia 692 42 1 1 7 11 35 4 1 5
genus Buttiauxella 174 10 1
genus Butyribacter 5 2 1 1
genus Butyricicoccus 923 77 10 13 33 34 34 24 1
genus Butyricimonas 1886 1236 456 19 31 16 29 35 28 14 15 7
genus Butyrivibrio 1599 1497 418 25 10 29 28 35 34 1 3 7 3
genus Bythopirellula 17
genus Caballeronia 26 14 4
genus Caedibacter 4
genus Caenispirillum 27
genus Caenorhabditis 1
genus Caldalkalibacillus 204 2 1
genus Caldanaerobacter 93 116 1 1 18 1
genus Caldanaerobius 52 8
genus Caldanaerovirga 5
genus Caldibacillus 5 1 18 3
genus Caldicellulosiruptor 2261 115 4 32 1 35 5 6
genus Caldicoprobacter 54 119
genus Caldilinea 789 10 14 3 7
genus Caldimicrobium 3 1
genus Caldimonas 29
genus Caldinitratiruptor 411 7
genus Caldisalinibacter 713 2
genus Caldisericum 1 13 7 1
genus Caldisphaera 2
genus Calditerricola 4
genus Calditerrivibrio 14 1 3 1
genus Caldithrix 479 15 4 17 1 7
genus Callithamnion 1
genus Calochaete 16
genus Calonectria 1
genus Caloramator 2398 1077 1 9 24 2 9 35 1 7
genus Caloranaerobacter 2 7 33
genus Caloribacterium 15
genus Calothrix 1013 138 5 3 5 6
genus Camelimonas 3
genus Caminibacter 2 3 2 1
genus Caminicella 49 960 4
genus Campylobacter 915 560 263 28 12 3 7 35 34 7 7
genus Candida 9 27 1
genus Candida 9 9
genus Candidatus Azobacteroides 137 14 4
genus Candidatus Bipolaricaulis Hao et al. 2018 7
genus Candidatus Cytomitobacter Tashyreva, Prokopchuk, and Lukes 2018 4
genus Candidatus Desulforudis 1 26
genus Candidatus Entotheonella Schmidt et al. 2000 5
genus Candidatus Fermentimicrarchaeum 1
genus Candidatus Forterrea 1
genus Candidatus Gloeomargarita Couradeau et al. 2012 1
genus Candidatus Methanoregula Brauer et al. 2006 1
genus Candidatus Methylomirabilis Ettwig et al. 2010 11
genus Candidatus Methylospira Danilova et al. 2016 13
genus Candidatus Nanopusillus 1
genus Candidatus Nitrosoglobus 1
genus Candidatus Nitrotoga Alawi et al. 2007 4
genus Candidatus Peribacter Anantharaman et al. 2016 7
genus Candidatus Prometheoarchaeum 1
genus Candidatus Reidiella Russell et al. 2020 8
genus Candidatus Sumerlaea 2
genus Candidatus Syntrophocurvum Sorokin et al. 2016 13
genus Candidatus Tenderia Eddie et al. 2016 1 25
genus Candidatus Tokpelaia Neuvonen et al. 2016 9
genus Candidatus Velamenicoccus Kizina et al. 2022 6 1
genus Candidatus Viadribacter Braun and Szewzyk 2016 4
genus Candidatus Walczuchella 1
genus Candidimonas 1
genus Canibacter 2
genus Canicola 115 5
genus Canis 18
genus Capillimicrobium 1
genus Capnocytophaga 31 19 2 1 1 35 4 1
genus Caproicibacter 1
genus Caproicibacterium 1 1
genus Caproiciproducens 1 1 14 29 35 5
genus Carboxydocella 1388 92 4 3 31 1 2
genus Carboxydothermus 52 2 4
genus Carboxylicivirga 344 1 1
genus Cardinium 1 1
genus Cardiobacterium 59 141 2 1 18
genus Carnimonas 29
genus Carnobacterium 101 5 8 1 35 5 1 2
genus Carsonella 1
genus Carteria 1
genus Casaltella 1026 6 3
genus Casimicrobium Song et al. 2020 16
genus Castellaniella 16 1
genus Catabacter 255 99 8 1 1 6
genus Catalinimonas 1
genus Catellatispora 3
genus Catellicoccus 1
genus Catenibacterium 685 450 293 2 4 16 1 8 2
genus Catenisphaera 121 2 1
genus Catenovulum 4 6 1
genus Catenuliplanes 1
genus Catenulispora 8 13 4
genus Catonella 1679 1500 1 3 11 1 16 4
genus Caulerpa 1
genus Caulobacter 21 18 1 1 35 4
genus Cavenderia 1
genus Cecembia 19
genus Cedecea 108 5 34
genus Celeribacter 31 3
genus Celerinatantimonas 6
genus Cellulomonas 58 147 1 4 34 4
genus Cellulophaga 4 2 19 4
genus Cellulosibacter 230
genus Cellulosilyticum 1452 15 1 15 2 35 5
genus Cellulosimicrobium 4 25 2 1
genus Cellvibrio 43 50 1 32 3
genus Cenarchaeum DeLong and Preston 1996 3
genus Centipeda 6
genus Cerasicoccus 581 269 1 14 1
genus Cereibacter 3 9 1 26 2
genus Cesiribacter 52
genus Cetobacterium 132 61 4 2 1
genus Chaetoceros 1
genus Chamaesiphon 5 3
genus Chania 20 4 3
genus Chattonella 1
genus Chelativorans 4 11 12 1
genus Chelatococcus 12 5 19 1
genus Chelonobacter 73 2 1
genus Chiayiivirga 4
genus chimpanzees 1
genus Chishuiella 6
genus Chitinibacter 1
genus Chitinilyticum 3
genus Chitinimonas 25 1 10
genus Chitinispirillum 23 2
genus Chitinivibrio 2
genus Chitinivorax 12
genus Chitinolyticbacter 1 8
genus Chitinophaga 89 36 1 3 35 4
genus Chlamydia 1 2 1 21 1
genus Chlamydomonas 1
genus Chloracidobacterium 20 9 3
genus Chlorobaculum 2018 7 1 25 34 4 2
genus Chlorobium 5 1 33 1
genus Chloroflexus 14 14 2
genus Chlorogloeopsis 19
genus Chloroherpeton 14 30 6
genus Chloroparvula 1
genus Chloropicon 1
genus Chlorosarcinopsis 1
genus Chondrocystis 1
genus Chondromyces 101 1 1 19
genus Chondrus 1
genus Chordicoccus 1
genus Christensenella 380 180 3 15 28 16 35 5 2 2 7 1
genus Chromatium 477 7
genus Chromobacterium 218 22 9 35 12 1
genus Chromocurvus Csotonyi et al. 2011 1
genus Chromohalobacter 1 6 6 1
genus Chroococcidiopsis 5 1 27 1
genus Chroococcus 1012 2 2
genus Chroothece 1
genus Chryseobacterium 172 45 2 1 35 4 1 6
genus Chryseoglobus 12
genus Chryseolinea 52 27 4
genus Chryseomicrobium 34 2
genus Chrysochromulina 1
genus Chthoniobacter 41 12
genus Chthonomonas 6 175 10 3
genus Citreitalea 4
genus Citricoccus 9 2 16
genus Citrifermentans 4 13 2 5
genus Citrobacter 454 16 55 27 22 9 17 35 32 4 3 3
genus Citromicrobium 1 9 3
genus Cladophialophora 1
genus Clavibacter 1 26 4
genus Cloacibacillus 219 183 106 2 4 3 32 1 1 1
genus Cloacibacterium 18 2 1 10 3 1
genus Cloacimonas 6 1
genus Clostridiisalibacter 18
genus Clostridioides 189 489 38 5 35 3 35 26 6 3
genus Clostridium 2449 1531 779 56 40 37 35 35 35 1 17 7 3
genus Cnuella 3
genus Cnuibacter 3
genus Cobetia 1 24 1
genus Coccomyxa 1
genus Cocleimonas 2
genus Coenonia 12
genus Cognaticolwellia Liu et al. 2020 1
genus Cohaesibacter 1 10 1
genus Cohnella 776 81 3 3 35 5 7
genus Coleofasciculus 1
genus Colidextribacter 1 14 23
genus Colletotrichum 1
genus Collimonas 10 42 1 34 4
genus Collinsella 1981 1325 772 31 22 25 32 35 35 14 7 3
genus Colwellia 2 66 1 23 4
genus Comamonas 215 47 22 1 35 3 8 1
genus Commensalibacter 3
genus Companilactobacillus 279 206 1 1 1 35 5
genus Conchiformibius 8 5 6
genus Conexibacter 10 8 16
genus Confluentimicrobium 1
genus Congregibacter 8
genus Coniophora 1
genus Constrictibacter 2 1
genus Contubernalis 327 5
genus Coprobacillus 2383 778 155 9 26 29 5 8 2 3 7
genus Coprobacter 848 337 2 5 9 9 3 1
genus Coprococcus 2444 1537 2 26 40 36 31 35 31 2 17 7 3
genus Coprophilus 3
genus Coprothermobacter 24 98 7 1
genus Coraliomargarita 696 121 12 1
genus Corallibacter 1
genus Corallococcus 1 33 4
genus Cordyceps 1
genus Coriobacterium 189 61 1 2 35 3
genus Corticibacter 5
genus Corynebacterium 1215 869 444 22 25 13 8 35 34 7 1
genus Costertonia 1
genus Couchioplanes 6 21
genus Coxiella 31 1 1
genus Coxiella 1
genus Crassaminicella 1 35 1
genus Crateriforma Peeters et al. 2020 2
genus Craurococcus 2
genus Crenobacter 11
genus Crenothrix 4
genus Criblamydia 45
genus Criibacterium 1
genus Crinalium 1 1
genus Crithidia 1
genus Croceibacter 11 1
genus Croceibacterium 7 1
genus Croceicoccus 17 1
genus Cronobacter 84 83 6 1 34 6
genus Cruoricaptor 79 1
genus Cryobacterium 3 3 11 31 1
genus Cryomorpha 137
genus Cryptanaerobacter 12 5
genus Cryptobacterium 616 1 1 3 29 1
genus Cryptococcus 13
genus Cryptosporangium 3
genus Cryptosporidium 5
genus Cucumibacter 2
genus Cucurbitaria 1
genus Culturomica 13
genus Cuneatibacter 15
genus Cupidesulfovibrio 3 17
genus Cupriavidus 18 66 1 1 1 35 4
genus Curtobacterium 23 1 1 29 1
genus Curvibacter 53 7 6 1 20 2
genus Cutaneotrichosporon 1
genus Cutibacterium 7 14 29 1 35 3 1
genus Cyanobacterium 372 47 16 1
genus Cyanobium 7 1 1 30 1
genus Cyanophora 1
genus Cyanoptyche 1
genus Cyanothece 7 1
genus Cyberlindnera