Bacteria reported by various 16s providers

Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

class

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Acidimicrobiia 5 121 22
Acidithiobacillia 18 1
Acidobacteriia 850 197 5 40
Alphaproteobacteria 484 325 14 155
Anaerolineae 12 62 78
Aquificae 4
Archaeoglobea 1
Ardenticatenia 9 1
Armatimonadia 1
Babeliae 2
Bacilli 851 361 39 164
Bacteroidia 853 341 19 162
Balneolia 198 7
Betaproteobacteria 808 343 19 165
Blastocatellia 2 63 2
Brocadiae 3
Caldilineae 1 102 3
Caldisericia 1 2
candidate division Termite Group 3 2
Chitinispirillia 6
Chitinophagia 7 280 5
Chlamydiia 50 15
Chlorobia 1 29 134
Chloroflexia 3 32 14
Chthonomonadetes 28 3
Clostridia 854 361 39 165
Coriobacteriia 840 361 34 9
Cytophagia 10 306 13 4
Deferribacteres 1 1 2
Dehalococcoidia 1 80 33
Deinococci 11 82 12 110
Deltaproteobacteria 686 348 31 161
Dictyoglomi 28
Elusimicrobia 7 49 20 1
Endomicrobia 1
Epsilonproteobacteria 297 182 10 89
Erysipelotrichia 834 361 39 161
Fibrobacteria 206 76 15
Fimbriimonadia 15 1
Flavobacteriia 505 228 13 138
Fusobacteriia 169 209 7 85
Gammaproteobacteria 783 341 19 169
Gemmatimonadetes 2 30 16 2
Gloeobacteria 5 1
Halobacteria 2
Holophagae 177 80
Ignavibacteria 2 253 16 20
Ktedonobacteria 6 13
Lentisphaeria 303 126 8 2
Limnochordia 2 1
Malasseziomycetes 2
Methanobacteria 231 98 17 60
Methanomicrobia 20 2
Methylacidiphilae 3
Mollicutes 180 312 26 153
Negativicutes 855 361 37 11
Nitriliruptoria 19 85
Nitrososphaeria 1
Nitrospinia 2
Nitrospira 2 20 28
Oligoflexia 1 4
Oligosphaeria 1 14
Opitutae 108 155 1 102
Pedosphaerae 1
Pentapetalae 21
Phycisphaerae 2 4
Planctomycetia 3 42 6
Rhodothermia 4
Rubrobacteria 2 34 4
Saprospiria 68 4
Solibacteres 1 6
Spartobacteria 23 8
Sphingobacteriia 22 241 28 156
Spirochaetia 28 62 4
Synergistia 251 151 1 117
Thermodesulfobacteria 27
Thermoleophilia 2 39 5
Thermolithobacteria 17
Thermomicrobia 1 2 1
Thermoplasmata 21 17
Thermoprotei 5
Thermotogae 4
Tissierellia 326 343 17 158
unclassified alpha proteobacteria 2
unclassified epsilon proteobacteria 2
Verrucomicrobiae 522 324 28 147

family

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zetaproteobacteria 1 10 1
Acanthopleuribacteraceae 20
Acaryochloridaceae 2
Acetobacteraceae 7 105 1 61
Acholeplasmataceae 18 236 11 145
Acidaminococcaceae 597 331 23 11
Acidiferrobacteraceae 6 4
Acidimicrobiaceae 123 23
Acidithiobacillaceae 18 1
Acidobacteriaceae 99 62 32
Acidothermaceae 13 1
Actinomycetaceae 690 315 26 133
Actinopolysporaceae 51 48
Aerococcaceae 94 290 70
Aeromonadaceae 11 92 2 52
Akkermansiaceae 281 314 28 10
Alcaligenaceae 12 72 10 157
Alcanivoracaceae 12 26
Algiphilaceae 15
Alicyclobacillaceae 139 8 4
Alteromonadaceae 186 45
Amoebophilaceae 136
Anaerolineaceae 10 61 25
Anaeromyxobacteraceae 219 2
Anaeroplasmataceae 128 146 3 14
anamorphic Mycosphaerellaceae 1
Anaplasmataceae 18 49
Aphanizomenonaceae 1 4
Aphanothecaceae 2 1
Apiaceae 1
Aquificaceae 3 6
Archaeoglobaceae 1
Archangiaceae 27 4
Ardenticatenaceae 9 1
Armatimonadaceae 1
Atopobiaceae 118 233 12 6
Aurantimonadaceae 1 1 3
Babeliaceae 3
Bacillaceae 256 282 34 151
Bacillales Family X. Incertae Sedis 1 182 151
Bacteriovoracaceae 2 14 1
Bacteroidaceae 835 359 38 163
Balneolaceae 201 1 12
bandicoots 1
Barnesiellaceae 303 22
Bartonellaceae 2 12
Bdellovibrionaceae 1 3
Beijerinckiaceae 1 6 9
Bernardetiaceae 44 1
Beutenbergiaceae 1 1
Bifidobacteriaceae 669 355 28 159
Blastocatellaceae 2
Blattabacteriaceae 4
Bogoriellaceae 12 3
Borreliaceae 2 9
Brachyspiraceae 14 19
Bradymonadaceae 1
Bradyrhizobiaceae 17 25 14
Brevibacteriaceae 70 42 16
Brevinemataceae 2
Brocadiaceae 4
Brucellaceae 29 19 4 16
Budviciaceae 115 4
Burkholderiaceae 42 108 15 98
Caedimonadaceae 1
Calanidae 1
Caldicoprobacteraceae 253 8
Caldilineaceae 1 105 67
Caldisericaceae 1 1
Calditrichaceae 40
Campylobacteraceae 296 153 4 65
Candidatus Homeothermaceae 4
Cardiobacteriaceae 10 67 4
Carnobacteriaceae 366 186 5 78
Catabacteriaceae 107 70 1
Catalimonadaceae 26
Catenulisporaceae 1 4
Caulobacteraceae 17 44 81
Celerinatantimonadaceae 4
Cellulomonadaceae 21 13
Cellvibrionaceae 29 4
Centrarchidae 1
Chamaesiphonaceae 4 3
Chelatococcaceae 1 1
Chelidae 1
Chitinispirillaceae 6
Chitinivibrionaceae 2
Chitinophagaceae 9 279 90
Chlamydiaceae 1 2
Chlorobiaceae 30 135
Chloroflexaceae 2 1
Chlorogloeopsidaceae 4
Chordaceae 1
Christensenellaceae 138 53 25 23
Chromatiaceae 5 212 1 144
Chromobacteriaceae 44 4
Chroococcaceae 61
Chroococcidiopsidaceae 2 1
Chrysiogenaceae 6 44
Chthoniobacteraceae 4 8
Chthonomonadaceae 29 3
Cichlidae 1
Clostridiaceae 839 359 39 179
Clostridiales Family XI. Incertae Sedis 231
Clostridiales Family XII. Incertae Sedis 18 208
Clostridiales Family XIII. Incertae Sedis 707 329 33 6
Clostridiales Family XVI. Incertae Sedis 7 101
Clostridiales Family XVII. Incertae Sedis 32 17
Clostridiales incertae sedis 745 4
Cochlospermaceae 1
Cohaesibacteraceae 1 1
Coleofasciculaceae 4
Colwelliaceae 84 4
Comamonadaceae 129 68 2 138
Competibacteraceae 62
Conexibacteraceae 1 6 1
Corbulidae 1
Coriobacteriaceae 826 317 36 176
Corynebacteriaceae 495 217 7 96
Coxiellaceae 2 22 8
Criblamydiaceae 20
Crocinitomicaceae 19 3 1
crown conchs 1
Cryomorphaceae 1 40 1
Cyanobacteriaceae 21 23
Cyanothecaceae 1
Cyclobacteriaceae 104 4
Cytophagaceae 6 256 4 141
Dacrymycetaceae 1
Deferribacteraceae 1 39 63
Defluviitaleaceae 20 93 3
Dehalococcoidaceae 18 30
Deinococcaceae 10 45 76
Demequinaceae 17
Dermabacteraceae 70 28 27
Dermacoccaceae 7 9 3
Dermatophilaceae 1 1
Dermocarpellaceae 1
Desulfarculaceae 99 1
Desulfobacteraceae 2 229 2 41
Desulfobulbaceae 41 1 2
Desulfofervidaceae 1
Desulfohalobiaceae 20 49
Desulfomicrobiaceae 98 14
Desulfonatronaceae 22 49
Desulfovibrionaceae 684 329 34 162
Desulfurellaceae 3 2
Desulfurobacteriaceae 5 1
Desulfuromonadaceae 46 80
Dictyoglomaceae 28 1
Dientamoebidae Grasse, 1953 1
Dietziaceae 4 48 13
Dunaliellaceae 1
Dysgonamonadaceae 24 4
Ectothiorhodospiraceae 1 88 114
Eggerthellaceae 459 351 38 11
Egibacteraceae 1
Egicoccaceae 1
Elusimicrobiaceae 7 29 4
Emplectonematidae 1
Endomicrobiaceae 1
Endozoicomonadaceae 1
Enterobacteriaceae 639 231 18 169
Enterococcaceae 157 99 30 156
Entomoplasmataceae 30 89
Eremolepidaceae 1
Erwiniaceae 126 105 4 4
Erysipelotrichaceae 834 349 24 179
Erythrobacteraceae 3 13 31
Eubacteriaceae 322 359 39 160
Euzebyaceae 14 85
Ferrimonadaceae 23 2
Ferrovaceae Johnson et al. 2014 1
Fervidobacteriaceae 4
Fibrobacteraceae 155 75 16
Fimbriimonadaceae 15 2
Flammeovirgaceae 1 153 48
Flavobacteriaceae 501 201 3 140
Fortieaceae 4
Francisellaceae 26 10
Frankiaceae 2 4
Fusobacteriaceae 140 179 8 68
Gaiellaceae 2 19
Gallionellaceae 15 19
Geminicoccaceae 2
Gemmataceae 1 6 4
Gemmatimonadaceae 1 13 3
Geobacteraceae 19 13
Geodermatophilaceae 3 47 4
Glareolidae 1
Gloeobacteraceae 5 1
Glycomycetaceae 57 16
Gnetaceae 1
Gomontiellaceae 38 1
Gomphosphaeriaceae 5
Gordoniaceae 4 33 7
Gottschalkiaceae 4
Gracilibacteraceae 8 178 4
Granulosicoccaceae 34 1
Haematopodidae 1
Hafniaceae 6 25 1
Hahellaceae 71 18
Halanaerobiaceae 1 82 27
Halieaceae 1 36 1
Haliscomenobacteraceae 37 3
Haloarchaeaceae 1
Halobacteriovoraceae 18 4
Halobacteroidaceae 120 17
Halomonadaceae 1 183 2 73
Haloplasmataceae 1 9
Halorubraceae 1
Halothiobacillaceae 33 3
Hapalosiphonaceae 1
Helicobacteraceae 4 14 59
Heliobacteriaceae 75 4 73
Herpetosiphonaceae 2
Heteroleibleiniaceae 6
Holophagaceae 168 80
Holosporaceae 3
Hungateiclostridiaceae 4
Hydrogenophilaceae 5 73 24
Hydrogenothermaceae 8 1
Hyellaceae 1
Hymenobacteraceae 2 69 4
Hyphomicrobiaceae 4 44 74
Hyphomonadaceae 1 197 21
Iamiaceae 3 9
Ichthyobacteriaceae 1
Idiomarinaceae 15 14
Ignavibacteriaceae 1 19 17
Immundisolibacteraceae 3
Intrasporangiaceae 3 22 6
Isosphaeraceae 2 5 5
Jiangellaceae 2 4
Jonesiaceae 28 1
Kallotenuaceae 7
Kangiellaceae 17 1
Kiloniellaceae 19 3 36
Kineosporiaceae 1 9 4
Kofleriaceae 1 15 11
Kordiimonadaceae 51
Kosmotogaceae 1 1
Labilitrichaceae 24
Lachnospiraceae 850 359 39 183
Lactobacillaceae 824 353 26 154
Lanariaceae 1
Legionellaceae 1 21 106
Lentisphaeraceae 3
Leptolyngbyaceae 1 2 4
Leptospiraceae 14 64
Leptotrichiaceae 52 68 29
Leuconostocaceae 113 332 10 135
Lewinellaceae 7
Limnochordaceae 2 1
Listeriaceae 1 121 120
Litoricolaceae 20 6
Magnetococcaceae 6 1
Malasseziaceae 2
Marinifilaceae 94 4
Marinilabiliaceae 1 207 8 1
Mariprofundaceae 1 10 1
Melioribacteraceae 251 16 4
Merismopediaceae 3
Mesoaciditogaceae 1
Methanobacteriaceae 231 96 5 60
Methanocorpusculaceae 1 1
Methanomassiliicoccaceae 21 17
Methanoregulaceae 1
Methylacidiphilaceae 4
Methylobacteriaceae 9 31 21
Methylococcaceae 1 73 6
Methylocystaceae 1 8 7
Methylophilaceae 98 70
Methylothermaceae 16
Microbacteriaceae 67 197 66
Microbulbiferaceae 4
Micrococcaceae 179 174 10 76
Microcoleaceae 114 9
Microcystaceae 4
Micromonosporaceae 2 78 50
Micropepsaceae 8
Microscillaceae 45 1
Microthrixaceae 1
Midichloriaceae 1 1
mitosporic Venturiaceae 1
moles, shrew-moles, and desmans 1
Mooreiaceae 2
Moraxellaceae 40 179 2 88
Morganellaceae 11 176 4
Moritellaceae 1 1
Mycobacteriaceae 75 32 49
Mycoplasmataceae 16 241 6 132
Myxococcaceae 2 4
Mzabimycetaceae 56
Nakamurellaceae 2 4
Nannocystaceae 10 8
Nanopelagicaceae 3
Natranaerobiaceae 12 1
Nautiliaceae 11 1
Neisseriaceae 88 69 45
nightshade family 13
Nitriliruptoraceae 5
Nitrosomonadaceae 8 129 5 4
Nitrosopumilaceae 1
Nitrososphaeraceae 1
Nitrospinaceae 2
Nitrospiraceae 2 21 28
Nocardiaceae 23 5 22
Nocardioidaceae 4 130 28
Nocardiopsaceae 106 4
Nostocaceae 1 2 132
Oceanospirillaceae 108 46
Odoribacteraceae 358 343 35 152
Oleiphilaceae 3
Oligosphaeraceae 14
Opitutaceae 1 24 5
Orbaceae 3 4
Oscillatoriaceae 43 83
Oscillospiraceae 791 358 38 11
Oxalobacteraceae 281 180 26 109
Paenibacillaceae 3 309 32 134
Paludibacteraceae 1 4
Paracaedibacteraceae 1
Parachlamydiaceae 2 2
Paridae 1
Parvularculaceae 5 1
Pasteurellaceae 592 298 20 125
Pasteuriaceae 8
Patulibacteraceae 2 1
Pectobacteriaceae 1 165 1 4
Pelagibacteraceae 4 1
Peptococcaceae 559 331 26 161
Peptoniphilaceae 321 333 9 6
Peptostreptococcaceae 846 358 33 168
Persicobacteraceae 37 4
Petrotogaceae 4
Phycisphaeraceae 2 1
Phyllobacteriaceae 40 15 8
Piscirickettsiaceae 2 108 33
Planctomycetaceae 2 37 2
Planoceridae 1
Planococcaceae 40 303 18 84
Pleuronectidae 1
Porphyromonadaceae 570 359 38 163
Porticoccaceae 1
Prevotellaceae 625 358 24 159
Prochloraceae 2 4
Prochlorococcaceae 1
Prochlorotrichaceae 3
Prolixibacteraceae 53 1
Promicromonosporaceae 12 8
Propionibacteriaceae 142 143 15 17
Prorhynchidae 1
Proteinivoraceae 171
Pseudanabaenaceae 1 49
Pseudoalteromonadaceae 21 10
Pseudomonadaceae 71 164 4 45
Pseudonocardiaceae 1 98 67
Psychromonadaceae 15 7
Puniceicoccaceae 7 151 98
Rarobacteraceae 25
Rhabdochlamydiaceae 14
Rhizobiaceae 18 33 11 54
Rhodanobacteraceae 1 76 4
Rhodobacteraceae 11 99 4 53
Rhodobiaceae 3 4 4
Rhodocyclaceae 76 155 107
Rhodospirillaceae 404 287 26 128
Rhodothalassiaceae 9
Rhodothermaceae 56 6 141
Rickettsiaceae 99 96
Rikenellaceae 776 357 38 34
Rivulariaceae 35 90
Roseiarcaceae 3
Roseiflexaceae 1 8 1
rove beetles 1
Rubricoccaceae 3
Rubritaleaceae 66
Rubrobacteraceae 1 19 4
Ruminococcaceae 839 359 39 182
Saccharospirillaceae 138 5
Salinibacteraceae 1
Salinisphaeraceae 11 1
Salinivirgaceae 1
Sandaracinaceae 4 1
Sanguibacteraceae 1 1
Saprospiraceae 26 17
Schleiferiaceae 8
Scytonemataceae 1 4
Sedimentisphaeraceae 3
Segniliparaceae 13 1
Selenomonadaceae 62 217 14 6
Shewanellaceae 55 105
Simkaniaceae 6 1
Simmondsiaceae 1
Sinobacteraceae 3 52 117
Sneathiellaceae 3
Solibacteraceae 1 1
Solirubrobacteraceae 1 10 4
Sorangiaceae 1 1 15
Sphaerobacteraceae 6
Sphingobacteriaceae 8 241 26 159
Sphingomonadaceae 29 207 43
Spirillaceae 14
Spirochaetaceae 1 39 47
Spiroplasmataceae 146 4
Spirulinaceae 4
Spongiibacteraceae 78 1
Sporichthyaceae 6 1
Sporolactobacillaceae 63 36
Sporomusaceae 23 232 4
Staphylococcaceae 234 115 3 129
Sterolibacteriaceae 12 4
Streptococcaceae 839 357 39 162
Streptomycetaceae 75 2 50
Streptosporangiaceae 64 55
Succinivibrionaceae 16 107 46
Sulfolobaceae 5
Sutterellaceae 755 355 39 8
Symbiobacteriaceae 96 104
Synechococcaceae 6 49
Synergistaceae 251 152 1 118
Syntrophaceae 26 33
Syntrophobacteraceae 146 64
Syntrophomonadaceae 12 176 131
Syntrophorhabdaceae 1 13
Tannerellaceae Ormerod et al. 2016 429 9
Taphrinaceae 1
Temperatibacteraceae 1
Thermaceae 1 23 89
Thermoactinomycetaceae 1 169 98
Thermoanaerobacteraceae 229 120 138
Thermoanaerobacterales Family III. Incertae Sedis 67 1 151
Thermoanaerobacterales Family IV. Incertae Sedis 7
Thermodesulfobacteriaceae 12 27
Thermodesulfobiaceae 15 23 6 3
Thermogemmatisporaceae 5 13
Thermoleophilaceae 18
Thermolithobacteraceae 17
Thermomicrobiaceae 1
Thermomonosporaceae 29 53
Thermonemataceae 9
Thermosporotrichaceae 2
Thermotogaceae 1 19
Thioalkalispiraceae 1 28 3
Thiobacillaceae 5 1
Thiotrichaceae 1 42 109
Thorselliaceae 34
Tissierellaceae 1 32 1
Trueperaceae 1 9
Tsukamurellaceae 1 2 25
unclassified Enterobacterales 3
Veillonellaceae 807 353 32 165
Verrucomicrobia subdivision 3 4 1
Verrucomicrobiaceae 241 65 139
Vesicomyidae 1
Vibrionaceae 1 49 13
Vicinamibacteraceae 1
Victivallaceae 303 126 8 4
Waddliaceae 1
Wenzhouxiangellaceae 18 1
Woeseiaceae 1
Xanthobacteraceae 2 6 7
Xanthomonadaceae 35 112 127
Yersiniaceae 22 62 5 4

genus

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zoogloeaceae 2 4
16SrXII (Stolbur group) 3
Abiotrophia 19 34 6
Absiella 3
Acanthopleuribacter 20
Acaryochloris 2
Acetanaerobacterium 131 194 1
Acetatifactor 2 326 1
Acetitomaculum 148 254 1
Acetivibrio 34 293 27
Acetoanaerobium 204 1
Acetobacter 11 4
Acetobacterium 156 155
Acetobacteroides 107
Acetohalobium 13
Acetomicrobium 16 1
Acetonema 93
Acholeplasma 7 235 1 117
Achromatium 2
Achromobacter Yabuuchi and Yano 1981 emend. Yabuuchi et al. 1998 1 9 20
Acidaminobacter 97 46
Acidaminococcus 106 178 4 122
Acidibacter 21
Acidicaldus 1
Acidicapsa 28
Acidiferrobacter 3 3
Acidihalobacter 1
Acidimicrobium 23
Acidiphilium 1 7
Acidipropionibacterium 1 4
Acidisphaera 1
Aciditerrimonas 45
Acidithiobacillus 18 1
Acidobacterium 3
Acidothermus 13
Acidovorax 8 14 12
Acinetobacter 33 102 1 37
Acinothrix 1 1
Acizzia 1
Acrocarpospora 2
Actimicrobium 2
Actinaurispora 1
Actinoallomurus 1
Actinoalloteichus 4
Actinobacillus 105 82 3 86
Actinobaculum 20 5 17
Actinocatenispora 35 39
Actinocorallia 3 1
Actinokineospora 1
Actinomadura 18 15
Actinomyces 635 276 10 127
Actinomycetospora 2
Actinoplanes 43 7
Actinopolymorpha 12
Actinopolyspora 48 49
Actinosynnema 1
Actinotignum 20 36
Adhaeribacter 10
Adlercreutzia 565 3 131
Advenella 6 3
Aequorivita 7 2 2
Aeribacillus 24 1
Aeriscardovia 51
Aerococcus 19 84 6
Aeromicrobium 2 3 3
Aeromonas 11 63 2 5
Aerosphaera 52
Aestuariispira 156 2
Afipia 1 3
Agaribacter 131
Agarilytica 1
Agarivorans 3 1
Agathiphaga 1
Agathobacter 1
Agathobaculum 3
Aggregatibacter 189 57 48
Agmenellum 1
Agreia 1
Agrococcus 3 1 4
Agromyces 22 34
Ahniella 1
Akkermansia 517 316 28 158
Albidovulum 4
Albimonas 2
Alcaligenes 2 5 3
Alcalilimnicola 1
Alcanivorax 5 26
Algibacter 3 1
Algicola 19
Algimonas 5
Algiphilus 15
Algivirga 1
Algorimarina 1
Algoriphagus 47 3
Alicycliphilus 1 1 4
Alicyclobacillus 39 4 3
Aliiarcobacter 1
Aliidiomarina 10
Aliifodinibius 80
Aliihoeflea 1
Aliivibrio 1
Alishewanella 25 24
Alistipes 776 350 23 21
Alkalibacillus 2 16
Alkalibacter 38
Alkalibacterium 5 1 61
Alkalibaculum 76
Alkaliflexus 16 1
Alkalimarinus 5
Alkaliphilus 128 4 157
Alkalispirillum 1
Alkalitalea 1
Alkanibacter 1
Alkanindiges 1 3
Allisonella 77 66 3
Alloactinosynnema 4
Allobaculum 9 49 23
Allocatelliglobosispora 1
Allochromatium 11
Allofrancisella 2 1
Allofustis 2 1 1
Alloiococcus 3 33 2
Allokutzneria 1 1
Alloprevotella 96 170 2
Alloscardovia 27 39 21
Alocasia 1
Alsobacter 1
Altererythrobacter 3 5 4
Alteribacillus 1
Alterococcus 13
Alteromonas 8 4
Altibacter 1
Alysiella 2 2
Amaricoccus 1 1 8
Ameyamaea 3
Aminicella 174
Aminiphilus 1 23
Aminipila 4
Aminivibrio 15
Aminobacter 1 4
Aminobacterium 8 6
Aminomonas 23 4
Ammonifex 4 44
Ammoniphilus 10 9
Amnibacterium 1
Amoebophilus 135
Amorphonostoc 1 58
Amphibacillus 11 4
Amphritea 1 5
Amycolatopsis 2 9
Amylibacter 3
Anabaenopsis 1
Anaerobacillus 25 1 44
Anaerobacter 64
Anaerobacterium 49 16 4
Anaerobiospirillum 12
Anaerobium 110 20
Anaerobranca 169 120
Anaerobutyricum 4
Anaerocella 58
Anaerococcus 407 214 6 83
Anaerocolumna 295 8
Anaerofilum 261 178 8 151
Anaerofustis 211 212 40
Anaeroglobus 22 207
Anaerolinea 4 12 11
Anaeromassilibacillus 10
Anaeromusa 5 33
Anaeromyxobacter 219 2
Anaerophaga 3
Anaeroplasma 48 78 1 12
Anaerorhabdus 6
Anaerosalibacter 83
Anaerosinus 37 5
Anaerosphaera 33
Anaerospora 59
Anaerosporobacter 586 211 6
Anaerostipes 824 375 39 164
Anaerotaenia 3
Anaerotignum 5
Anaerotruncus 772 314 31 158
Anaerovibrio 9 2 1 137
Anaerovorax 286 18 14
Anaplasma 6 1
Anderseniella 4
Andreprevotia 1
Aneurinibacillus 1 18 3
Angelakisella 23
Annandia 2
Anoxybacillus 4 16 23
Anoxybacter 4
Anoxynatronum 240
Antarctobacter 1
aphid P-endosymbionts 1 3
Apibacter 1
Aquabacterium 5 12 1
Aquamicrobium 4
Aquaspirillum 9
Aquibacter 1 6
Aquicella 5
Aquiflexum 4 1
Aquihabitans 7
Aquimarina 7 7
Aquimonas 9 1
Aquincola 1
Aquipuribacter 1 3
Aquisalimonas 20
Aquisphaera 2
Aquitalea 3 5
Arabia 1 1
Arachidicoccus 3
Arcanobacterium 34 12 1 7
Archaeoglobus 1
Archangium 1
Arcicella 41
Arcobacter 2 4 8
Arcticibacterium 1
Ardenticatena 9
Arenibacter 1 4
Arenimonas 12
Argyropelecus 1
Arhodomonas 7
Aridibacter 13
Armatimonas 1
Aromatoleum 1
Arsenicicoccus 1 1
Arsenophonus 18 4
Arthothelium 1
Arthrobacter 15 3 1 42
Arthromitus 3
Arthrospira 1 1 5
Arum 1
Asaccharobacter 11
Asaccharospora 104
Asaia 4 1
Asinibacterium 3
Asteroleplasma 74 94 1
Asticcacaulis 1 19 65
Atlantibacter 1
Atopobium 116 136 3 52
Atopococcus 9
Atopostipes 24
Aurantimicrobium 1
Aurantimonas 1
Auraticoccus 1 3
Aureibacter 3
Aureicoccus 1
Aureimonas 1 1
Aureispira 1
Aureitalea 3
Auricoccus 1
Auritidibacter 1
Austwickia 1
Avibacterium 23 17
Azoarcus 3 1 14
Azohydromonas 3
Azonexus 6
Azorhizobium 1 1
Azospira 12 2 1
Azospirillum 2 133 2 35
Babela 2
Bacillus 81 159 1 127
Bacillus altitudinis complex 3
Bacteria 2
Bacterioplanes 1 1
Bacteriovorax 1 10
Bacteroides 835 350 18 182
Baia 28
Balneatrix 5
Balneola 70 12
Barnesiella 444 312 5 8
Barrientosiimonas 8
Bartonella 2 11
Basfia 3 1
Basilea 1
Bdellovibrio 1 3
Beggiatoa 1
Beijerinckia 2
Belliella 13 3
Bellilinea 1
Belnapia 1 1
Bergeyella 15 3
Bernardetia 31 1
Beutenbergia 1
Bibersteinia 1 2
Bifidobacterium 655 340 16 175
Bilophila 644 33 162
Biostraticola 13
Bisgaardia 31
Bittarella 8
Bizionia 2
Blastocatella 3
Blastochloris 3
Blastococcus 1 1
Blastocystis 2
Blastomonas 1
Blastopirellula 6
Blattabacterium 4
Blautia 838 361 39 183
Blochmannia 42
Bogoriella 5
Bombiscardovia 1 1
Bordetella 21 4
Borrelia 2 10
Bosea 3 5 5
Bowmanella 24
Brachiaria 1
Brachybacterium 15 6 20
Brachymonas 1
Bradymonas 1
Bradyrhizobium 12 1 12
Branchiibius 4
Brassicibacter 252 5
Brenneria 160 5
Breoghania 1
Brevefilum 1
Brevibacillus 39 1 20
Brevibacterium 70 42 18
Brevifollis 5
Brevinema 2
Brevirhabdus 1
Brevundimonas 14 13 15
Brochothrix 5 110
Brockia 12
Brucella 1 1
Bryobacter 3
Bulleidia 5 25 1 28
Burkholderia 2 26 10 50
Burkholderia cepacia complex 4
Bursatella 1
Buttiauxella 47 1 1
Butyricicoccus 79 230 37 5
Butyricimonas 479 319 31 146
Butyrivibrio 432 355 30 121
Bythopirellula 4
Caballeronia 9
Caedibacter 2
Caenispirillum 8
Caldalkalibacillus 52
Caldanaerobacter 1 38 7
Caldanaerobius 16
Caldanaerovirga 2
Caldariibacterium 2
Caldicellulosiruptor 25 1 141
Caldicoprobacter 125 8
Caldilinea 3 67
Caldimicrobium 1 1
Caldimonas 6
Caldinitratiruptor 98
Caldisalinibacter 172
Caldisericum 1 1
Calditerrivibrio 3 1
Caldithrix 1 40
Calochaete 4
Calolisianthus 1
Caloramator 1 241 10 146
Caloribacterium 5
Calothrix 35 83
Camarhynchus 1
Camelimonas 2
Camellia 1
Caminicella 232 3
Campylobacter 294 159 4 66
Campylotropis 1
Candidatus Aquiluna Hahn 2009 1
Candidatus Azobacteroides 21
Candidatus Contubernalis 15
Candidatus Endobugula 10
Candidatus Glomeribacter Bianciotto et al. 2003 72
Candidatus Ishikawaella 1
Candidatus Nitrosoglobus 1
Candidatus Pelagibacter 4
Candidatus Phlomobacter 4
Candidatus Phytoplasma 8 134
Candidatus Regiella 13
Candidatus Rhabdochlamydia 14
Candidatus Scalindua 3
Candidatus Soleaferrea 538 4
Candidatus Stoquefichus 127 1
Candidatus Tammella 74
Candidatus Vidania 1
Candidatus Walczuchella 1
Capnocytophaga 13 8 5
Caproiciproducens 1 31 4
Carboxydocella 8 101
Carboxydothermus 5 4
Carboxylicivirga 107 1
Cardiobacterium 10 55 3
Carnimonas 12
Carnobacterium 10 2 15
Casaltella 245 4
Castellaniella 1
Catabacter 106 70
Catellibacterium 3
Catellicoccus 1 2
Catenibacterium 308 120 1 56
Catenisphaera 38 2
Catenovulum 1
Catenulispora 1 4
Catonella 11 347 17 126
Caulobacter 4 6 5
Cecembia 8
Cedecea 37
Celeribacter 3
Celerinatantimonas 4
Cellulomonas 21 10
Cellulophaga 3 4
Cellulosibacter 20
Cellulosilyticum 15 345 2 4
Cellulosimicrobium 3
Cellvibrio 9 3
Centipeda 19
Cerasicoccus 94 42
Cereibacter 1
Cesiribacter 16
Cetobacterium 4 15 12
Chamaesiphon 4 3
Chania 9 3
Chelativorans 4 1
Chelatococcus 2 1
Chelonobacter 3
Chiayiivirga 2
Chiropotes 1
Chishuiella 5
Chitinilyticum 1
Chitinimonas 12
Chitinispirillum 6
Chitinivibrio 2
Chitinolyticbacter 1
Chitinophaga 16 7
Chlamydia 1 1
Chloracidobacterium 9 3
Chlorobaculum 136
Chlorobium 1 1
Chloroflexus 1
Chlorogloeopsis 5
Chloroherpeton 9 3
Chondrocystis 1
Chordaria 1
Christensenella 137 47 17 11
Chromatium 3 53
Chromobacterium 6 14
Chromohalobacter 3
Chroococcidiopsis 2 1
Chroococcus 60
Chryseobacterium 11 31 23
Chryseolinea 7 4
Chryseomicrobium 9
Chrysopa 1
Chthoniobacter 4 8
Chthonomonas 29 3
Cichlasoma 1
Citreitalea 1
Citricoccus 1
Citrobacter 62 3 14 40
Citromicrobium 3
Cladothrix Cohn 1875 1
Clavibacter 2 4
Cloaca 221 19 9 90
Cloacibacillus 115 58 11
Cloacibacterium 6 6 4
Clostridiisalibacter 5
Clostridioides 333 39 3 9
Clostridium 820 350 19 180
Cnuella 3
Cobetia 1
Cocleimonas 2
Coenonia 2
Cohaesibacter 1 1
Cohnella 23 75
Coleofasciculus 1
Colidextribacter 1 25
Collimonas 14 5
Collinsella 812 305 34 141
Colwellia 16 4
Comamonas 31 21 17
Commensalibacter Roh et al. 2008 1
Conchiformibius 1
Conexibacter 6 1
Confluentimicrobium 1
Congregibacter 3
coot 1
Coprobacillus 171 169 5 157
Coprobacter 311 246 11 1
Coprococcus 2 361 33 177
Coprothermobacter 6 18 2
Coptothyris 1
Coraliomargarita 25 54
Corallibacter 1
Coriobacterium 8 2 23
Corticibacter 1
Corynebacterium 494 207 6 104
Couchioplanes 2 1
Couratari 1
Coxiella 9 1
Craurococcus 2
Criblamydia 20
Crinalium 1 1
Croceibacter 6 1
Croceicoccus 1
Cronobacter 87 26 4
Crossiella 1
Cruoricaptor 1 29
Cryobacterium 11 2 1
Cryomorpha 35
Cryptanaerobacter 1
Cryptobacterium 3 122 1
Cucumibacter 2
Cupriavidus 2 19 5
Curculigo 1
Curtibacterium 1 3
Curvibacter 10 3 2
Cutibacterium 36 5 1
Cyanobacterium 21 23
Cyanobium 1 3 1
Cyanothece 1
Cyclobacterium 19 4
Cycloclasticus 12 4
Cyclonatronum 3
Cylindrospermum 1
Cyphomandra 5 1
Cystobacter 14 4
Cytophaga 1 29 1
Dactylosporangium 1
Dasania 9
Dechloromonas 27
Deefgea 3
Deferribacter 12 46
Deferrisoma 12
Defluviicoccus 5
Defluviimonas 3
Defluviitalea 2 77
Defluviitoga 1 1
Dehalobacter 71 5 4
Dehalobacterium 9 74
Dehalococcoides 18 3
Dehalogenimonas 66 32
Dehalospirillum 12
Deinococcus 10 44 1 77
Delftia 80 4 4
Deltavirus 1
Demequina 16 1
Dendrosporobacter 25
Denitratisoma 1 5 22
Denitrobacter 1
Denitrobacterium 1 7 1
Denitrovibrio 3
Dermabacter 57 22 6
Dermacoccus 1 1 4
Dermatosorus 1
Derxia 12
Desemzia 73
Desertibacter 3
Desmospora 5
Desulfacinum 13
Desulfallas 1
Desulfarculus 66 1
Desulfatibacillum 1 1
Desulfatiferula 12
Desulfatiglans 4
Desulfatirhabdium 1
Desulfatitalea 4
Desulfitibacter 1 31 2
Desulfitispora 19
Desulfitobacterium 1 31 38
Desulfobacca 11 2
Desulfobacter 5 18
Desulfobacterium 112 1
Desulfobacula 3
Desulfobaculum 7
Desulfobotulus 1
Desulfobulbus 35 1
Desulfocapsa 1 1
Desulfocarbo 55
Desulfocella 1 129
Desulfococcus 3 4
Desulfocurvus 1
Desulfofaba 18
Desulfofarcimen 4
Desulfofrigus 16 15
Desulfofustis 3
Desulfoglaeba 100
Desulfohalobium 3 2
Desulfomicrobium 92 14
Desulfomonile 4 30
Desulfonatronobacter 3
Desulfonatronovibrio 4 42
Desulfonatronum 22 49
Desulfonauticus 5 8
Desulfonema 13
Desulfonispora 48
Desulfoplanes 8
Desulforegula 27
Desulforhabdus 1
Desulfosalsimonas 2
Desulfosarcina 12 11
Desulfosoma 53
Desulfosporosinus 1 87 1 88
Desulfotalea 1 1
Desulfothermus 3
Desulfotomaculum 2 285 10 91
Desulfovibrio 406 323 16 149
Desulfovirga 6
Desulfurella 2 2
Desulfuribacillus 2
Desulfurispira 2
Desulfurispirillum 44
Desulfurispora 207 77
Desulfurivibrio 2 1
Desulfurobacterium 4 1
Desulfurococcus 1
Desulfuromonas 29 9
Desulfuromusa 2 71
Dethiobacter 1 6 23
Dethiosulfatibacter 117
Dethiosulfovibrio 48 74
Devosia 1 26 62
Devriesea 1
Dialister 515 327 13 103
Diaphorobacter 1 3
Dichelobacter 1
Dichotomicrobium 3
Dickeya 8 1 10
Dictyoglomus 28 1
Dielma 330 207 9 4
Dientamoeba Jepps & Dobell, 1918 1
Dietzia 3 48 13
Dinoroseobacter 1
Diplorickettsia 11
Diplosphaera 8
Dissulfuribacter 7
Dokdonella 7 73
Dokdonia 11 4
Dolichospermum 111
Dolosicoccus 1
Dolosigranulum 4 75
Dongia 80
Dorea 825 368 38 178
Doritaenopsis 1
Draconibacterium 8 1
Duganella 1 2
Duncaniella 4
Duodenibacillus 8 1
Dyadobacter 32 57
Dyella 3 2
Dysgonomonas 11 238 4 133
Echinicola 25 4
Echinops 1
Ectothiorhodosinus 3
Ectothiorhodospira 15 50
Edaphobacter 21
Edwardsiella 9 5
Effusibacillus 82
Eggerthella 604 278 25 142
Eggerthia 2 122
Egibacter 1
Egicoccus 1
Ehrlichia 9 45
Eikenella 11 4 1
Eionea 1
Eisenbergiella 542 262 23 2
Eisenibacter 45
Ekhidna 1
Elizabethkingia 20 6
Elstera 2
Elusimicrobium 7 29 1
Emcibacter 49
Empedobacter 8 1
Emticicia 69 2 114
Enchytraeus 1
Endobacter 1
Endomicrobium 1
Endozoicomonas 1
Enhydrobacter 1
Enorma 34 46 3
Ensifer 1 1
Enterococcus 151 63 29 146
Enterorhabdus 282 127 7 4
Enterovibrio 1
Entomoplasma 12 9
Epibacterium 1
Epulopiscium 63 4 1
Ercella 100 1
Ereboglobus 3
Eremococcus 10 2
Erinaceus 1
Erwinia 1 72 1 62
Erysipelatoclostridium 798 373 36 9
Erysipelothrix 229 3 129
Erythrobacter 8 29
Escherichia 1 16 10 127
Ethanoligenens 298 87
Eubacterium 168 361 39 173
Eucorethra 1
Eudoraea 32
Euglena 1
Euryhalocaulis 7
Euzebya 14 85
Euzebyella 1
Exiguobacterium 14 8
Extensimonas 1
Ezakiella 21 1
Fabibacter 5
Facklamia 56 274 23
Faecalibacterium 816 361 37 181
Faecalibaculum 1
Faecalicatena Sakamoto et al. 2017 22
Faecalicoccus 234 4 2
Faecalitalea 46 19 8
Falcatimonas 1 15
Falsiporphyromonas 109
Fangia 14
Fastidiosipila 80 29 2 3
Fenollaria 197 5 1
Fergusonia 1 5
Fermentimonas 4
Ferrimicrobium 2 3
Ferrimonas 23 2
Ferrithrix 69
Ferrovibrio 2
Ferrovum Johnson et al. 2014 1
Ferruginibacter 1 29
Fervidibacterium 8
Fervidicella 4
Fibrella 3
Fibrobacter 96 70 16
Fictibacillus 18 4
Filifactor 2 124 19 60
Filimonas 1 4
Fimbriimonas 15 2
Finegoldia 471 268 6 93
Fischerella 1
Flagellimonas 1
Flammeovirga 21 48
Flavicella 4
Flaviflexus 8 3
Flavihumibacter 2
Flavisolibacter 1 1 8
Flavitalea 1 5
Flavivirga 1
Flavobacterium 428 22 12
Flavonifractor 812 361 33 10
Flectobacillus 40
Flexibacter 1 2 2
Flexistipes 22 1
Flexithrix 6
Flexivirga 1
Flintibacter 26
Fluoribacter 1
Fluviicola 14 3 1
Fluviimonas 132
Fodinibius 2
Fodinicurvata 164 1
Fontibacter 6
Fonticella 2 39
Formosa 5
Fournierella 1 16
Francisella 18 10
Franconibacter 3
Frankia 4
Frateuria 1 1
Fremyella 2
Fretibacter 12
Fretibacterium 103 1
Friedmanniella 9 5
Frigoribacterium 1 1
Frischella 1 3
Frondicola 1
Fructobacillus 15 13
Fuchsiella 3
Fucophilus 1
Fulvitalea 30
Fulvivirga 39
Fusibacter 75 12
Fusicatenibacter 796 357 18 1
Fusobacterium 140 163 4 65
Gabonibacter 10
Gaetbulibacter 1
Gaiella 2 19
Galenea 14
Gallaecimonas 3
Gallibacterium 1 15 5
Gallicola 76 28 1
Gallionella 14 21
Garciella 4
Gardnerella 43 40 2 9
Garritya 2
Gelria 228 1
Gemella 184 179 4 145
Geminicoccus 1 17
Geminocystis 1
Gemmata 1 4 4
Gemmatimonas 11 2
Gemmatirosa 2 1
Gemmiger 323 18
Geoalkalibacter 1
Geobacillus 6 20 12 60
Geobacter 17 13
Geodermatophilus 6 2
Geofilum 23
Geopsychrobacter 3
Georgenia 9 3
Geosporobacter 4
Geothermobacter 1
Geothrix 129 80
Geovibrio 1 7
Gibbsiella 4
Giesbergeria 1 1
Gilliamella 1
Gillichthys 1
Gillisia 12 90
Gilvimarinus 1
Gimesia 2
Glaciecola 35 31
Glaciimonas 2
Glaesserella 1
Globicatella 2 12
Gloeobacter 5 1
Gluconacetobacter 6 1
Gluconobacter 1 28
Glutamicibacter 28
Glycera 1
Glycocaulis 1 1
Glycomyces 7 15
Gorbachella 1 1
Gordonia 4 31 6
Gordonibacter 479 212 26 6
Gottschalkia 53 4
Gracilibacillus 44
Gracilibacter 3 175 3
Gracilimonas 108
Gramella 3 31
Granulibacter 4
Granulicatella 360 29 68
Granulicella 5 7
Granulosicoccus 32 1
Gryllotalpicola 4 1
Guggenheimella 137
Gullanella 2
Gymnocintractia 1
Gynuella 17 1
Haematobacter 3 3
Haematospirillum 2
Haemophilus 571 277 16 128
Hafnia 12 1
Hahella 71 18
Halanaerobacter 1 3
Halanaerobaculum 2
Halanaerobium 2 27
Halarsenatibacter 29
Haliangium 1 14 11
Haliea 1 6
Halioglobus 1 1
Haliscomenobacter 30 3
Halobacillus 11 4
Halobacteriovorax 18 4
Halobacteroides 3 1
Halocella 5 4
Halochromatium 80 18
Halodesulfovibrio 3
Haloferax 1
Haloferula 14
Halolactibacillus 4
Halomicronema 1 3
Halomonas 1 162 1 35
Halonatronum 2
Haloplasma 1 9
Halopolyspora 55
Halorhodospira 21 10
Halorubrobacterium 1
Halospina 7
Halospirulina 1
Halotalea 1
Halothermothrix 56 1
Halothiobacillus 17 2
Halyseosphaera 1
Hartmannibacter 1
Hathewaya 202
Hazenella 10
Helcococcus 22 57 20
Heleococcum 1
Helicobacter 4 13 59
Heliimonas 3
Heliobacterium 3 1
Heliomonas 1
Heliophilum 5
Heliorestis 3 65
Heliothrix 1
Hellea 4
Henriciella 158
Heratemis 1
Herbaspirillum 270 21 13 74
Herbinix 135 6 4
Herminiimonas 73 8
Herpetosiphon 3
Hespellia 523 345 16
Hippea 1 1
Hirschia 1
Histophilus 4 1
Hoeflea 1
Holdemanella 219 4 3
Holdemania 602 314 23 153
Holophaga 1
Hoppeia 2
Howardella 134 250 4
Hoyosella 14
Hugenholtzia 12
Humibacter 7
Hungateiclostridium 4
Hungatella 338 34 5
Hwangdonia 6
Hydrocarboniphaga 1 116
Hydrocoleum 1
Hydrogenibacillus 31 5
Hydrogenispora 194
Hydrogenoanaerobacterium 240 312
Hydrogenobaculum 4
Hydrogenophaga 1 2 1
Hydrogenophilus 3 72 63
Hydrogenothermus 5
Hydrotalea 1 12
Hymenobacter 3 15 113
Hyphomicrobium 2 5 18
Hyphomonas 2 21
Iamia 1 2
Ianmoorea 3
Icaria 1
Ichthyobacterium 1
Ideonella 2
Idiomarina 4 14
Ignatzschineria 5
Ignavibacterium 19 18
Ignavigranum 2 38
Ihubacter 29
Ileibacterium 3
Ilumatobacter 33
Ilyobacter 4
Immundisolibacter 3
Imperialibacter 14
Indibacter 9
Indioceanicola 3
Inquilinus 5 2
Insolitispirillum 95
Intestinibacillus 9
Intestinibacter 814 316 21 1
Intestinimonas 762 351 37 11
Iodobacter 1 3
Isochromatium 2
Janibacter 2 1 2
Jannaschia 1 1
Janthinobacterium 4 6
Jatropha 1
Jatrophihabitans 2 1
Jeotgalibaca 3
Jeotgalibacillus 2
Jeotgalicoccus 2 22 3
Jiangella 1 5
Johnsonella 17 259 153
Jonesia 29 1
Jonquetella 11 42 2
Kaistia 16 2
Kallipyga 28 1 1
Kallotenue 7
Kandleria 60
Kangiella 16 1
Kastovskya 3
Keratinibaculum 4
Ketobacter 1
Ketogulonicigenium 1
Kiloniella 19 3
Kineococcus 3 1
Kineosporia 2
Kinetoplastibacterium 3
Kingella 12 2 2
Kistimonas 1
Kitasatospora 2 12
Klebsiella 157 31 7 58
Kluyvera 573 3 5
Kockovaella 1
Kocuria 14 12 11
Komagataeibacter 13 2
Kordia 1
Kordiimonas 2
Koreibacter 2
Kosakonia 88 3
Kosmotoga 1 4
Kozakia 1 3
Krassilnikovia 1
Kribbella 92 11
Kushneria 1 3 39
Kutzneria 1
Kyrpidia 51 1
Kytococcus 2 1
Labilibacter 2
Labilithrix 24
Labrenzia 1
Laceyella 4 18
Lachnoanaerobaculum 23 351 4
Lachnobacterium 13 261 29 146
Lachnoclostridium 361 39 9
Lachnospira 754 333 35 177
Lachnotalea 3
Lacibacter 3 2
Lacibacterium 46
Lacihabitans 4
Lacimicrobium 1
Lacinutrix 1 3
Lactobacillus 616 347 21 157
Lactococcus 284 207 10 84
Lactonifactor 503 247 29
Lacunisphaera 3
Lamprocystis 2
Laribacter 1 3
Lautropia 20 17 3
Lawsonella 1
Lawsonia 212 4
Lebetimonas 6
Lecanora 1
Legionella 1 21 108
Leifsonia 2 1 1
Leisingera 1
Lelliottia 4
Leminorella 1
Lentibacillus 25 32
Lentisphaera 3
Lentzea 3
Leptolinea 32
Leptolyngbya 2 1 40
Leptonema 6
Leptospira 6 64
Leptospirillum 9 1
Leptothrix 34
Leptotrichia 43 21 9
Leucobacter 19 5
Leuconostoc 87 266 4 85
Leucothrix 2 8
Levilinea 1
Levyella 151 1
Lewinella 7 16
Libanicoccus 1 1
Liberibacter 6 1
Limibacillus 8
Limibacter 2
Limimonas 3
Limisphaera 2
Limnobacter 1 14 109
Limnobaculum 1
Limnochorda 2 1
Limnohabitans 2 2
Limnoraphis 2
Lishizhenia 1
Listeria 1 121 46
Litoribacillus 38
Litoribacter 9
Litoribrevibacter 5
Litoricola 20 6
Litorilinea 5
Litorilituus 32 4
Loktanella 5 1
Longilinea 1
Longimonas 26
Lucinoma 1
Ludwigia 1
Luminiphilus 27
Luna cluster 1 3
Luteibacter 1 29 92
Luteibaculum 1
Luteimonas 4 6
Luteipulveratus 1
Luteitalea 1
Luteivirga 4
Luteococcus 5
Luteolibacter 1 12 80
Lutibacter 1 13 4
Lutispora 87 1
Lutra 1
Lyme Disease Borrelia 3
Lysinibacillus 9 6 31
Lysinimonas 1
Lysobacter 2 38 36
MAC 2
Macrococcus 1 5 78
Madoqua 1
Mageeibacillus 1
Magnetococcus 6 1
Magnetospira 3 1
Magnetospirillum 3 2
Magnetovibrio 2
Mahella 7
Malassezia 2
Maledivibacter 15
Mangrovibacter 1
Mangroviflexus 2
Mannheimia 8 34 63
Maribacter 1 5
Maricaulis 8
Marichromatium 1 6 32
Marinicauda 1
Marinicella 7
Marinifilum 94
Mariniflexile 3 4
Marinilabilia 18 1
Marinilactibacillus 4
Marinimicrobium 1
Marininema 1
Mariniphaga 14
Mariniradius 7
Marinitalea Kim et al. 2011 1
Marinithermofilum 2
Marinithermus 1
Marinitoga 1 6
Marinobacter 73 11
Marinobacterium 19 4
Marinococcus 4 11
Marinomonas 17 5
Marinoscillum 14
Marinospirillum 20 33
Marinovum 1
Mariprofundus 10 1
Marispirillum 32
Maritalea 1
Maritimibacter 1
Marivirga 2 1
Marivivens 1
Marixanthomonas 11
Marmoricola 8 1
Marseillibacter 1 36
Martelella 2
Marvinbryantia 634 329 3 5
Massilia 7 10 20 4
Massilioclostridium 1 24
Massiliprevotella 3
Mechercharimyces 7 2
Mediterranea 3
Megamonas 66 108 2 30
Meganema 14
Megasphaera 563 223 148
Meiothermus 1 9 78
Meiracyllium 1
Melaminivora 1
Melghiribacillus 3
Melghirimyces 17
Melioribacter 253 11 4
Melissococcus 1 6
Melitea 1
Melittangium 4 1
Meniscus 14
Merdibacter 1 7
Mesoaciditoga 1
Mesoflavibacter 1
Mesonia 6
Mesoplasma 11 89
Mesorhizobium 10 4 4
Mesotoga 1
Metabacterium 1 2
Metakosakonia 1
Metallibacterium 1
Metallosphaera 5
Metaprevotella 3
Methanobrevibacter 227 93 4 67
Methanocorpusculum 1 1
Methanolinea 1
Methanomassiliicoccus 26 17
Methanomethylophilus 23
Methanosphaera 40 13 2 13
Methylacidimicrobium van Teeseling et al. 2014 1
Methylarcula 12
Methylibium 3
Methylobacillus 44 67
Methylobacter 4
Methylobacterium 9 18 23
Methylocaldum 2 4
Methyloceanibacter 1
Methylocella 4 8
Methylococcus 1
Methylocystis 5 2
Methylogaea 1 26
Methyloglobulus 28
Methylohalobius 8
Methylohalomonas 4
Methyloligella 2
Methylomagnum 4
Methylomarinovum 7
Methylomicrobium 4 3
Methylomonas 6 3
Methylomusa 4
Methylonatrum 2 92
Methyloparacoccus 2
Methylophaga 64 8
Methylophilus 11
Methylorubrum 4
Methylosinus 6
Methylosoma 1
Methylosphaera 4
Methylotenera 33 3
Methylothermus 1
Methyloversatilis 33 7
Methylovulum 1
Micavibrio 3
Microaerobacter 13
Microbacter 81
Microbacterium 11 88 41
Microbulbifer 6
Micrococcus 10 1 3
Microcoleus 24
Microcystis 4
Microlunatus 20 1
Micromonospora 2 12
Micropruina 1 1
Microscilla 1
Microterricola 4
Microtetraspora 1 2
Microthrix 1
Microvirga 1 4 1
Microvirgula 2
Millisia 1
Miniimonas 1
Mitsuaria 3
Mitsuokella 18 37 3 74
Mixta 1
Mizugakiibacter 7
Mobilitalea 55 2
Mobiluncus 129 124 1 24
Modestobacter 2 39
Modicisalibacter 1
Mogibacterium 529 262 1 145
Moheibacter 10
Mongoliicoccus 8
Mongoliitalea 1
Monoglobus 4
Moorea 29 2
Mooreia 2
Moorella 12 127
Moraxella 14 105 5
Mordavella 1 6 4
Morganella 4 70 20
Moritella 1 1
Moryella 697 293 4 23
Mucilaginibacter 21 5 4
Mucinivorans 22 1
Mucispirillum 3 1
Murdochiella 246 1 4
Muribaculum 4
Muricauda 1 8
Muriicola 1
Murimonas 334 3
Myceligenerans 6
Mycobacterium 32 19 51
Mycobacterium chelonae complex 2
Mycobacterium complex 2
Mycobacterium fortuitum complex 3
Mycoplana 1
Mycoplasma 9 233 1 132
Myroides 10 6
Myxobotrys 1 11
Myxococcus 1
Nafulsella 6
Nakamurella 2 3
Nannocystis 9 8
Nanoscypha 1
Natranaerobaculum 2
Natranaerobius 9 1
Natranaerovirga 231 7
Natribacillus 1
Natroniella 3
Natronincola 36 135
Naumannella 7
Nautilia 4 1
Ndongobacter 1
Necropsobacter 7
Negativibacillus 1 29 1
Negativicoccus 131 100 54
Neglecta 1
Neisseria 81 21 11 25
Neoasaia 1 1
Neochlamydia 1
Neorhizobium 4
Neorickettsia 2 6
Neoscardovia 27
Neptuniibacter 2
Neptunomonas 1
Nereis 1
Nesterenkonia 41 6
Nevskia 1 3 8
Niabella 1 263 38
Niastella 1 3 1
Nibribacter 24
Nicoletella 4
Nigella 1
Nisaea 10
Nitratifractor 1
Nitratireductor 4
Nitratiruptor 1 1
Nitriliruptor 5
Nitrincola 1
Nitrobacter 3 1
Nitrococcus 13
Nitrolancea 4
Nitrosococcus 1 15 28
Nitrosomonas 2 122 5 3
Nitrosopumilus 1
Nitrososphaera 1
Nitrosospira 1 3
Nitrospina 2
Nitrospira 1 2
Nitrospirillum 3 1
Niveispirillum 83 1
Nocardia 3 4
Nocardioides 3 38 4
Nocardiopsis 16 5
Nodularia 1 21
Nonomuraea 13 22
Nosocomiicoccus 6
Novibacillus 8 4
Noviherbaspirillum 10
Novispirillum 51 83
Novosphingobium 7 16 5
Oblitimonas 1
Oceanibaculum 1
Oceanibulbus 1 3
Oceanicoccus 23 1
Oceanimonas 2 1
Oceanirhabdus 3
Oceanithermus 1
Oceanobacillus 13 4
Oceanobacter 1
Oceanospirillum 27 3
Oceanotoga 1
Ochrobactrum 28 3 15
Octadecabacter 1 3
Odoribacter 619 308 33 158
Oenococcus 35 38
Oerskovia 1
Ohtaekwangia 28
Okeania 2
Oleibacter 3
Oleiphilus 3
Oleispira 1
Oleomonas 10
Oligella 8 10 13
Oligosphaera 14
Oligotropha 1
Olivibacter 3 121
Olleya 4
Olsenella 62 183 9 18
Opitutus 1 4 5
Orbus 2
Orenia 19
Oribacterium 41 356 28 135
Orientia 42 1
Ornatilinea 3
Ornithinicoccus 1 2
Ornithinimicrobium 4
Ornithobacterium 3 4
Orrella 1
Oscillatoria 36
Oscillibacter 739 360 38 13
Oscillospira 622 1 32 171
Osmadenia 1
Otariodibacter 9
Ottowia 3
Owenweeksia 1 1
Oxalicibacterium 40
Oxalobacter 117 8 87
Oxalophagus 1 18
Oxobacter 5 98
Oxynema 2
Paenalcaligenes 1 1
Paenarthrobacter 1 1
Paenibacillus 1 294 13 70
Paeniclostridium 40 4
Paeniglutamicibacter 1
Paenisporosarcina 22 4
Pagothenia 1
Paludibacter 40 3 6
Paludibacterium 2
Paludibaculum 5
Paludisphaera 3
Panacagrimonas 2
Pandoraea 12 5
Pannonibacter 4
Panonychus 1
Pantoea 187 55 1 12
Papillibacter 417 190 29
Parabacteroides 759 371 37 181
Paraburkholderia 28 1 4
Parachlamydia 1 1
Paraclostridium 21
Paracoccus 1 18 8
Paraeggerthella 15 42
Parafilimonas 25
Parageobacillus 4 1
Paraglaciecola 5 1
Paraliobacillus 3
Parapedobacter 10 62
Paraperlucidibaca 1
Paraphotobacterium 1
Paraprevotella 212 310 8 127
Pararhodospirillum 1 1
Parasaccharibacter 1 1
Parascardovia 4 3 49
Parasegetibacter 2
Parashewanella 1
Parasporobacterium 169 161 17
Parasutterella 594 345 24 6
Parolsenella 1
Parvibacter 93 24 1
Parvibaculum 1
Parvimonas 95 73 5
Parvularcula 6 1
Pasteurella 20 9 14
Pasteuria 8
Patulibacter 2 1
Paucibacter 2 6
Paucimonas 2
Pectinatus 55 1 123
Pectobacterium 3 25 4
Pediococcus 33 40 103
Pedobacter 4 131 23 156
Pedomicrobium 1 1 2
Pelagibaca 1
Pelagibacterium 1
Pelagibius 2
Pelagicoccus 27 46
Pelistega 1 2
Pelobacter 18 8
Pelodictyon 1
Pelolinea 3 1
Pelomonas 20 4 2
Pelosinus 102 4
Pelospora 22
Pelotomaculum 36 68
Peptoanaerobacter 14
Peptoclostridium 662 57 1
Peptococcus 406 153 5 150
Peptoniphilus 438 300 6 154
Peptostreptococcus 205 154 2 43
Perameles 1
Peredibacter 4
Perexilibacter 18
Perlucidibaca 3
Permianibacter 20
Persephonella 1
Persicirhabdus 9
Persicitalea 23
Persicobacter 4 4
Petrimonas 10 4
Petrotoga 2
Phaeobacter 8
Phaeobacterium 6
Phaeochromatium 6
Phaeocystidibacter 7
Phaeodactylibacter 8
Phascolarctobacterium 553 325 19 165
Phaseolibacter 2
Phenylobacterium 2 11 11
Phocaeicola 1 91
Phocea 11
Phoenicibacter 1
Photobacterium 1 11
Photorhabdus 44 4
Phreatobacter 1 1
Phycicoccus 1
Phycisphaera 2 1
Phyllobacterium 30 1
Phytoactinopolyspora 1
Phytomonospora 15
Pigmentiphaga 14
Pilibacter 12
Pilimelia 1 6
Pimelobacter 3
Pirellula 9
Pisciglobus 14
Piscinibacter 3
Piscirickettsia 8 1
Planctopirus 1 1
plane trees 1
Planifilum 1 7 94
Planktomarina 2
Planktophila 1 2
Planktothrix 3
Planococcus 30 34
Planomicrobium 36 3 5
Plantibacter 1 1
Plasticicumulans 60
Pleionea 1
Pleomorphomonas 4 1
Plesiocystis 3
Pleurocapsa 1
Pleuronectes 1
Pluralibacter 16 4
Polaribacter 1 8
Polaromonas 1 5
Polycladomyces 19
Polymonas 1 8
Polymorphobacter 2
Polymorphum 2
Polynucleibacter 30
Pontibacillus 72 49
Pontibacter 1 7 69
Ponticaulis 2
Pontivivens 1
Porphyrobacter 1 1 1
Porphyromonas 364 301 15 153
Portibacter 1
Porticoccus 1
Portiera 1
Povalibacter 1
Pragia 114 4
Prauserella 2
Prevotella 478 373 23 176
Prochlorococcus 2 5
Prochlorothrix 1
Prognathochromis 1
Prolixibacter 3
Promicromonospora 1 3
Propionibacterium 120 14 9 10
Propionicimonas 1 3
Propioniferax 3 70
Propionigenium 3 6
Propionimicrobium 11
Propionispira 2 14
Propionispora 31 113
Propionivibrio 2 16 8
Prosthecobacter 13 39
Prosthecochloris 1 4
Proteiniborus 91
Proteiniclasticum 1
Proteiniphilum 40 13 4
Proteinivorax 35
Proteocatella 66 3
Proteus 17 45 1 10
Protochlamydia 1
Providencia 77 12
Pseudacidovorax 2
Pseudaeromonas 18
Pseudaminobacter 1
Pseudanabaena 4
Pseudarcicella 23 1
Pseudarthrobacter 1
Pseudoalteromonas 11
Pseudobacteroides 8
Pseudobutyrivibrio 830 221 27 149
Pseudochrobactrum 1 5 2
Pseudoclavibacter 53 132 8
Pseudoclostridium 4
Pseudodesulfovibrio 4
Pseudoduganella 6
Pseudoflavitalea 4
Pseudoflavonifractor 497 320 31 5
Pseudofulvibacter 1
Pseudofulvimonas 1
Pseudoglutamicibacter 6
Pseudohongiella 4 2
Pseudokineococcus 4
Pseudolabrys 1
pseudomallei group 4
Pseudomaricurvus 2
Pseudomonas 70 167 4 49
Pseudomonas chlororaphis group 4
Pseudonocardia 9 7
Pseudopedobacter 91 1 1
Pseudopropionibacterium 6 1
Pseudoramibacter 3 49 64
Pseudorhodobacter 45
Pseudorhodoferax 1
Pseudorhodoplanes 1
Pseudoscardovia 232
Pseudoscillatoria 164
Pseudospirillum 1
Pseudothermotoga 4
Pseudovibrio 2 1
Pseudoxanthobacter 2
Pseudoxanthomonas 6 22 4
Psychrilyobacter 10
Psychrobacter 2 65 73
Psychroflexus 17 18
Psychromicrobium 1
Psychromonas 13 7
Psychroserpens 2 1
Psychrosinus 9
Psychrosphaera 2
Pullulanibacillus 49 2
Puniceicoccus 44 18
Pusillimonas 3 1
Pyramidobacter 50 14
Pyrenomonas 1
Pyrinomonas 19
Pyxicoccus Reichenbach 2005 1
Qipengyuania 1
Quadrisphaera 1
Rahnella 11 1
Ralstonia 16 6 12
Ramlibacter 3 2
Raoultella 32 5
Raoultibacter 11
Raphidiopsis 3
Rapidithrix 6
Rarobacter 25
Rathayibacter 2 2
Rehaibacterium 2
Reichenbachiella 6
Reinekea 75
Renobacter 4
Reyranella 6
Rhabdochromatium 8
Rheinheimera 4 34 2
Rhizobacter 6
Rhizobium 13 19 5 5
Rhizomicrobium 8
Rhodanobacter 24 1
Rhodobaca 1
Rhodobacter 4 2 25
Rhodococcus 23 2 20
Rhodocyclus 1
Rhodocytophaga 1 20
Rhodoferax 2 12
Rhodoluna 3
Rhodomicrobium 3 1
Rhodonellum 14
Rhodopirellula 1 1
Rhodoplanes 1 1 8
Rhodopseudomonas 5 9 3
Rhodospira 4
Rhodospirillum 1 2 76
Rhodothalassium 9 4
Rhodothermus 2 136
Rhodovibrio 12 32
Rhodovulum 3 17 4
Rickettsia 72 97
Rickettsiella 8
Riemerella 3 3
Rikenella 2 2 9
Risungbinella 10
Rivibacter 1
Rivicola 3
Rivularia 17
Robiginitalea 1 1
Robiginitomaculum 3
Robinsoniella 180 286 33
Rodentibacter 1
Romboutsia 546 317 3 1
Roseateles 3 1
Roseburia 834 361 39 179
Roseiarcus 3
Roseibacterium 1 1
Roseiflexus 7 1
Roseimarinus 4
Roseimicrobium 17
Roseitalea 1
Roseivirga 25
Roseivivax 2
Rosenbergiella 74
Roseobacter 3
Roseococcus 1 7 6
Roseomonas 4 7 23
Roseospira 5 18
Roseovarius 1 2 3
Rothia 158 10 24 56
Rubellimicrobium 3 8 4
Rubidibacter 2
Rubidimonas 26
Rubinisphaera 3
Rubribacterium 1
Rubritalea 66 59
Rubritepida 1
Rubrivivax 2 2
Rubrobacter 1 19 4
Rudaea 3
Rudanella 2
Ruegeria 1
Rufibacter 20 4
Ruminiclostridium 34 361 38 10
Ruminobacter 30 1
Ruminococcus 347 39 181
Rummeliibacillus 1 20 1
Runella 37 64
Ruthenibacterium 1 33 5
Saccharibacillus 9
Saccharibacter 6
Saccharicrinis 30
Saccharimonas 20
Saccharofermentans 70 2
Saccharomonospora 77 1
Saccharophagus 1
Saccharopolyspora 26 59
Saccharospirillum 5
Saccharothrix 1 1
Sagittula 1
Saguinus 1
Salegentibacter 4
Salibacterium 4
Salimicrobium 11 3
Salinibacillus 9
Salinibacter 1
Salinibacterium 1
Salinicoccus 36 81
Salinicola 1 1
Salinimicrobium 1 1
Salinimonas 4
Salinisphaera 11 1
Salinispira 4
Salinispirillum 78
Salinivenus 1
Salinivibrio 16 2
Salinivirga 1
Salipiger 1
Salisaeta 31 32
Salmonella 4 5 20 35
Sambucus 1
Sandaracinobacter 1
Sandaracinus 4 1
Sanguibacter 1 1
Saprospira 1
Sarcina 807 102
Scardovia 9 19 11
Schaalia 4
Schlegelella 3 2 2
Schleiferia 8
Schlesneria 1
Schumannella 1
Schwartzia 5
Scytonema 4
Sebaldella 1 22
Sedimentibacter 2 81 150
Sedimenticola 7 3
Sedimentisphaera 3
Sedimentitalea 1
Sediminibacillus 1
Sediminibacterium 1 13
Sediminicola 1
Sediminispirochaeta 1
Sediminitomix 34
Segetibacter 21 23
Segniliparus 13 1
Seinonella 6
Selenihalanaerobacter 28
Selenomonas 23 48 8 147
Sellimonas 1
Seminibacterium 1
Senegalimassilia 229 132 14 2
Seonamhaeicola 3
Serinibacter 1
Serinicoccus 7 3
Serpentinomonas 2
Serpula Stanton et al. 1991 14 19
Serratia 8 53 3 124
Sharpea 7 66
Shewanella 56 106
Shigella 1 135 6
Shimazuella 1 6
Shimia 1
Shimwellia 1
Shinella 6 4 3
Shivajiella 1
Shuttleworthia 261 253 108
Siansivirga 1 3
Sideroxydans 1
Silanimonas 13
Silicimonas 1
Simiduia 10 1
Simkania 6 1
Simonsiella 3
Simplicispira 3
Singulisphaera 1 3 4
Sinibacillus 28
Sinobaca 1
Sinobacterium 43
Sinomonas 5 1
Sinorhizobium 5
Sinorhizobium fredii group 4
Sinorhizobium/Ensifer group 1 4
Sinosporangium 4
Siphonobacter 15
Skermanella 1 19 70
Slackia 273 211 19 140
Smithella 3 1
Sneathia 9 35 4
Sneathiella 3
Snodgrassella 1
Snowella 5
Sodalis 4
Soehngenia 1 5
Solimonas 4
Solirubrobacter 1 10 4
Solitalea 15 1
Solobacterium 103 51 2 3
Sorangium 2 1 4
Sphaerimonospora 3
Sphaerobacter 2
Sphaerochaeta 1
Sphaerospermopsis 1
Sphingobacterium 4 72 3 156
Sphingobium 8 27 17
Sphingomicrobium 5
Sphingomonas 24 190 14 26
Sphingopyxis 3 11 4
Sphingorhabdus 2 1
Sphingosinicella 1 4
Spiribacter 8 4
Spirilliplanes 2
Spirillum 14
Spirochaeta 13
Spiroplasma 145 4
Spirosoma 4 5
Spirulina 3
Spongitalea 1
Sporacetigenium 57
Sporanaerobacter 6 1 4
Sporichthya 6 2
Sporisorium 1
Sporobacter 429 332 11
Sporobacterium 1 223 1
Sporocytophaga 2
Sporohalobacter 6
Sporolactobacillus 3 36
Sporomusa 77
Sporosalibacterium 21
Sporosarcina 293 23 24
Sporotomaculum 69 84
Stackebrandtia 52 1
Stanieria 1
Staphylococcus 232 83 2 70
Stappia 1
Starria 36
Stella 74
Stenotrophomonas 30 17 23
Stenoxybacter 3
Steroidobacter 8 1
Sterolibacterium 4
Stigmatella 11 1
Stomatobaculum 18 149 2
Streptacidiphilus 4
Streptobacillus 2 26 3
Streptococcus 829 355 39 178
Streptohalobacillus 3
Streptomonospora 99
Streptomyces 72 2 42
Streptosporangium 4 5
Subdoligranulum 825 359 22 6
Subsaximicrobium 1
Succinatimonas 6 28
Succiniclasticum 37 91 5 11
Succinimonas 31
Succinispira 43
Succinivibrio Bryant and Small 1956 9 45 48
Sufflavibacter 1
Sulcia 1 2
Sulfobacillus 14 13
Sulfuricaulis 3
Sulfuricella 1
Sulfuricurvum 3
Sulfuriferula 2
Sulfuriflexus 1
Sulfurifustis 3 1
Sulfurihydrogenibium 1
Sulfurimonas 1 1
Sulfurisoma 2
Sulfuritalea 1
Sulfurivirga 7
Sulfurovum 1 1
Sungkyunkwania 1
Sunxiuqinia 22
Sutterella 553 348 30 180
Suttonella 9
Swaminathania 1
Symbiobacterium 6 104
Symploca 3
Synechococcus 3 3
Synergistes 15 4 4
Syntrophaceticus 17
Syntrophobacter 6 2
Syntrophobotulus 6 1
Syntrophococcus 31 223 11
Syntrophomonas 3 151 31
Syntrophorhabdus 13
Syntrophothermus 17 1
Syntrophus 11 3
Taeniopygia 1
Taibaiella 1 26
Tamilnaduibacter 11
Tamlana 2 1
Tangfeifania 6
Tannerella 11 131 6
Tanticharoenia 1
Taonella 1
Tapinothrix 6
Tardiphaga 1
Tateyamaria 1
Tatumella 2 1
Taylorella 4 1
Telmatocola 1
Telmatospirillum 14 11
Temperatibacter 1
Tenacibaculum 3 27
Tenuibacillus 4
Tepidamorphus 1
Tepidanaerobacter 8 69
Tepidibacillus 25
Tepidibacter 45 51
Tepidimicrobium 137 1 14
Tepidimonas 13 14 1
Terasakiella 1
Terasakiispira 2
Teredinibacter 1
Terrabacter 1
Terracoccus 1
Terribacillus 13 1 3
Terriglobus 3 4
Terrimonas 19
Terrisporobacter 636 291 6 2
Tessaracoccus 24 64 1
Tetragenococcus 2 43 96
Tetrasphaera 6
Texcoconibacillus 55
Thalassococcus 3
Thalassolituus 1
Thalassomonas 7
Thalassospira 390 3 37
Thalassotalea 35 1
Thauera 29 29
Thermacetogenium 8 1
Thermaerobacter 17 4
Thermanaeromonas 1 3
Thermanaerothrix Gregoire et al. 2011 1
Thermanaerovibrio 1 1
Thermasporomyces 7
Thermicanus 1 180 128
Thermincola 1 13 3
Thermoactinomyces 71 7
Thermoanaerobacter 13 53
Thermoanaerobacterium 3 28
Thermoanaerobaculum 36
Thermobacillus 5 7
Thermobaculum 35 36
Thermobifida 1
Thermobispora 3 1
Thermoclostridium 4
Thermococcus 2
Thermocrinis 3 1
Thermodesulfatator 1 27
Thermodesulfobacterium 1
Thermodesulfobium 6 2 1
Thermodesulforhabdus 17
Thermodesulfovibrio 5 26
Thermoflexibacter 45
Thermogemmatispora 5 13
Thermogutta 11 1
Thermogymnomonas 9
Thermohalobacter 8
Thermohydrogenium 14
Thermoleophilum 18
Thermolithobacter 17
Thermolongibacillus 26
Thermomarinilinea 11
Thermomicrobium 1
Thermomonas 5 1 1
Thermomonospora 3
Thermonema 9
Thermophagus 31
Thermosediminibacter 11 1
Thermosinus 1
Thermosipho 3
Thermosporothrix 2
Thermosulfidibacter 2
Thermosynechococcus 1
Thermosyntropha 3
Thermotoga 1
Thermotomaculum 5
Thermovenabulum 12 25
Thermovibrio 1
Thermovirga 3
Thermovorax 2
Thermus 13 27
Thioalbus 1
Thioalkalicoccus 5
Thioalkalimicrobium 1 31 21
Thioalkalispira 4
Thioalkalivibrio 18 25
Thiobacillus 1 13 25
Thiobacter 2
Thiocapsa 35 62
Thioclava 1 1
Thiococcus 1
Thiocystis 20 2
Thiofaba 1
Thioflavicoccus 1
Thiohalobacter 1
Thiohalocapsa 36
Thiohalomonas 3
Thiohalophilus 1
Thiohalorhabdus 56 89
Thiohalospira 4
Thiolamprovum 121
Thiolapillus 1
Thiomonas 1 92 43
Thiophaeococcus 6
Thioploca 3
Thioprofundum 4
Thioreductor 3
Thiorhodococcus 8 29
Thiorhodospira 2 6
Thiorhodovibrio 24
Thiothrix 1 34 113
Thiovirga 13 1
Thlaspi 1
Thorsellia 34
Tigriopus 1
Tilapia 1
Tindallia 51 141
Tissierella 30
Tistrella 15 1
Tolumonas 2 45
Tomitella 7
Tomopterna 1
Tonsillophilus 1
Trabulsiella 31
Tranquillimonas 1
Traorella 1
Treponema 1 24 48
Trichococcus 6 5 9
Trichocoleus 2
Trichodesmium 13
Trichormus 1
Tropheryma 24 1
Truepera 1 9
Trueperella 7 7 4
Tsukamurella 1 2 25
Tuberibacillus 6
Tumebacillus 13 1
Tunicatimonas 19
Turicella 3 5
Turicibacter 501 224 10 140
Turneriella 5
Tychonema 112
Tyzzerella 361 36 5
Udeniomyces 1
Uliginosibacterium 42 15
Umboniibacter 1
unclassified Erysipelotrichaceae 4
unclassified Ruminococcaceae 4
Undibacterium 5 8 3
Ureaplasma 10 12 8
Ureibacillus 22 6
Ursidibacter 16
Vagococcus 9 21 68
Vallitalea 31 3
Vampirococcus 1
Vampirovibrio 10 1
Varibaculum 273 116 5 32
Variibacter 1 3
Variovorax 1 3 1 9
Veillonella 580 296 25 167
Verminephrobacter 13 1
Verrucomicrobium 30 1
Verrucosispora 2 1
Verticiella 2
Vibrio 27 13
Vibrio harveyi clade 3
Victivallis 301 126 7 1
Virgibacillus 1 17 18
Viridibacillus 8 23
Vitreoscilla 16 2
Vogesella 13 10
Volucribacter 9
Vulcanibacillus 3
Vulcaniibacterium 8
Vulcanithermus 5
Waddlia 1
Websdanea 1
Weeksella 3 1
Weissella 34 243 4 95
Wenyingzhuangia 2 3
Wenzhouxiangella 18 1
Wigglesworthia 4
Woeseia 1
Wohlfahrtiimonas 2
Wolbachia 6
Xanthobacter 2 1 1
Xanthomonas 1 10 11
Xenophilus 1
Xenorhabdus 91 4
Xylanimicrobium 1
Xylanimonas 1
Xylella 5
Xylophilus 2
Yangia 4
Yaniella 1
Yersinia 7 10 2 12
Youngiibacter 56
Youngimonas 4
Zeaxanthinibacter 2
Zhihengliuella 1 1
Zhongshania 19 1
Zhouia 2
Zobellella 30 3
Zobellia 1 4
Zoogloea 2 6
Zopfius 2
Zymobacter 24

kingdom

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zymomonas 1 1
Chlorobionta 21
Fungi 2

no rank

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Not yet classified (Prokaryotae) 224 1
[Clostridium] aminophilum DSM 10710 2
[Clostridium] bolteae 90A9 1
[Clostridium] cf. saccharolyticum K10 1
[Clostridium] citroniae WAL-17108 5
[Clostridium] clostridioforme 90A7 3
[Clostridium] clostridioforme 90A8 2
[Clostridium] innocuum 2959 4
[Clostridium] saccharogumia DSM 17460 3
[Clostridium] sphenoides JCM 1415 3
[Clostridium] spiroforme DSM 1552 1
[Clostridium] symbiosum WAL-14163 2 3
[Clostridium] ultunense Esp 1
[Eubacterium] cellulosolvens 6 1
[Eubacterium] siraeum DSM 15702 1 1
Absiella dolichum ATCC 29143 3
Accumulibacter 2
Acetobacterium sp. KB-1 1
Acinetobacter lwoffii WJ10621 1
Acinetobacter venetianus VE-C3 1
Actinobaculum sp. oral taxon 183 str. F0552 2
Actinomyces dentalis DSM 19115 1
Actinomyces graevenitzii F0530 2
Actinomyces johnsonii F0542 1
Actinomyces massiliensis 4401292 1
Actinomyces naeslundii Howell 279 3
Actinomyces oris K20 2
Actinoplanes teichomyceticus ATCC 31121 1
Aeromicrobium marinum DSM 15272 1
Aeromonas caviae Ae398 1
Aeromonas hydrophila 4AK4 1
Aeromonas salmonicida subsp. pectinolytica 34mel 1
Agathobaculum desmolans ATCC 43058 3
Aggregatibacter sp. oral taxon 458 str. W10330 1
Alcaligenaceae bacterium YIT 11859 4
Aliivibrio fischeri SR5 1
Alistipes onderdonkii DSM 19147 5
Alistipes putredinis DSM 17216 5
Alistipes senegalensis JC50 4
Alistipes sp. JC136 3
Allofustis seminis DSM 15817 1
Alloscardovia omnicolens F0580 2
Alteromonadales genera incertae sedis 1
Anabaena 2
Anaerostipes hadrus DSM 3319 1
Aneurinibacillus group 3 1
Angiospermae 21
Anoxybacillus kamchatkensis G10 1
ant endosymbionts 4
ant, tsetse, mealybug, aphid, etc. endosymbionts 1 2
aphid secondary symbionts 1
Aquiflexum balticum DSM 16537 1
Arcobacter cryaerophilus D2610 1
Arcobacter group 4
Arcobacter skirrowii CCUG 10374 1
ATCC 35035 3
ATCC 35423 1 2
ATCC 51140 3
Atopobium parvulum DNF00906 1
Auraticoccus monumenti 1 1
Bacillales Family XI. Incertae Sedis 207 142
Bacillales Family XII. Incertae Sedis 3 7
Bacillales incertae sedis 211 131
Bacillus amyloliquefaciens UMAF6639 1
Bacillus atrophaeus UCMB-5137 1
Bacillus cereus AH676 1
Bacillus cereus ATCC 4342 1
Bacillus cereus F 1
Bacillus cereus F65185 1
Bacillus cereus m1293 1
Bacillus cereus Rock3-44 1
Bacillus cereus Rock4-18 1
Bacillus cereus Rock4-2 1
Bacillus jeotgali 1
Bacillus megaterium NCT-2 1
Bacillus megaterium Q3 1
Bacillus simplex NBRC 15720 = DSM 1321 1
Bacillus thuringiensis LM1212 1
Bacillus thuringiensis serovar andalousiensis 1
Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 1
Bacillus thuringiensis serovar huazhongensis 1
Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 1
Bacillus thuringiensis serovar pulsiensis 1
Bacteria candidate phyla 169 1
bacterium 84634 4
Bacteroides acidifaciens JCM 10556 2
Bacteroides caccae CL03T12C61 4
Bacteroides cellulosilyticus CL02T12C19 1
Bacteroides cellulosilyticus WH2 1
Bacteroides chinchillae JCM 16497 2
Bacteroides clarus DSM 22519 2
Bacteroides faecis JCM 16478 2
Bacteroides fluxus DSM 22534 1
Bacteroides fragilis str. 3397 T10 1
Bacteroides fragilis str. 3976T8 2
Bacteroides gallinarum DSM 18171 1
Bacteroides intestinalis 341 1 2
Bacteroides oleiciplenus DSM 22535 1
Bacteroides ovatus 3_8_47FAA 2
Bacteroides ovatus CL02T12C04 1 1
Bacteroides ovatus CL03T12C18 1
Bacteroides rodentium JCM 16496 4
Bacteroides salyersiae CL02T12C01 1
Bacteroides sartorii A-C2-0 2
Bacteroides sp. AP1 3
Bacteroides sp. CC31F 3
Bacteroides sp. JCM 17103 1
Bacteroides uniformis CL03T12C37 2
Bacteroides vulgatus str. 3775 SL(B) 10 (iv) 1
Bacteroides vulgatus str. 3975 RP4 2
Bacteroides xylanisolvens CL03T12C04 1
Barnesiella intestinihominis str. YIT 11860 1 2
Bifidobacterium adolescentis JCM 15918 2
Bifidobacterium longum subsp. longum 1-6B 1
Bifidobacterium longum subsp. longum ATCC 55813 1
Bifidobacterium saeculare DSM 6531 2
Bilophila wadsworthia ATCC 49260 2
biota 855 1
Blattabacterium cuenoti BPAY 1
Blattabacterium cuenoti STAT 1
Blautia obeum ATCC 29174 5
Blautia producta ATCC 27340 1
Blautia schinkii DSM 10518 3
Blautia wexlerae DSM 19850 5
Borrelia coriaceae Co53 1
Borrelia crocidurae DOU 1
Borrelia hermsii YBT 1
Borreliella valaisiana VS116 1
Bovine herpesvirus type 2 (strain BHM-1) 1
Brevibacillus brevis X23 1
Brevibacillus laterosporus DSM 25 1
Brevibacterium massiliense 5401308 1
Brevibacterium mcbrellneri ATCC 49030 1
Buchnera aphidicola (Acyrthosiphon kondoi) 1
Buchnera aphidicola (Acyrthosiphon pisum) 2
Buchnera aphidicola (Cinara cedri) 1
Buchnera aphidicola (Cinara confinis) 1
Buchnera aphidicola (Cinara pseudotaxifoliae) 1
Buchnera aphidicola (Diuraphis noxia) 1
Buchnera aphidicola (Schizaphis graminum) 1
Buchnera aphidicola (Schlechtendalia chinensis) 1
Buchnera aphidicola (Tuberolachnus salignus) 1
Buchnera aphidicola (Uroleucon ambrosiae) 1
Bunyavirus la crosse 1
Burkholderiales Genera incertae sedis 22 4
Butyricicoccus pullicaecorum 1.2 3
Butyricimonas virosa DSM 23226 2
Calditrichae 40
Calothrix brevissima NIES-22 1
Calothrix parasitica NIES-267 1
Campylobacter sputorum biovar sputorum 1
Campylobacter sputorum bv. sputorum RM3237 1
Candidatus Uzinura 1
Canine adenovirus 2 1
Capnocytophaga sp. ChDC OS43 1
Catenibacterium mitsuokai DSM 15897 2
Catonella morbi ATCC 51271 2
CCUG 38732 2
Chlamydia/Chlamydophila group 1
Chlamydiae/Verrucomicrobia group 335 1
Chlorobium/Pelodictyon group 1
Chondrococcus 3
Chromobacterium group 4
Chromophyta 2
Clostridiales bacterium ph2 1
Clostridioides difficile F501 4
Clostridioides difficile M120 1
Clostridioides difficile P28 1
Clostridioides difficile QCD-37x79 1
Clostridioides difficile QCD-63q42 1
Clostridioides difficile QCD-76w55 1
Clostridium beijerinckii NRRL B-598 1
Clostridium botulinum B 1 4
Clostridium botulinum CDC_1436 1
Clostridium botulinum F 1
Clostridium celatum DSM 1785 1
Clostridium hathewayi 12489931 1
Clostridium hathewayi DSM 13479 4
Clostridium nexile ATCC 27757 5
Clostridium orbiscindens 1_3_50AFAA 4
Clostridium paraputrificum AGR2156 1
Clostridium perfringens F262 1
Clostridium ramosum DSM 1402 2
Clostridium sp. DL-VIII 2
Collinsella intestinalis DSM 13280 3
Collinsella sp. YIT 12063 1
Collinsella stercoris DSM 13279 3
core eudicots 21
Coriobacteriaceae bacterium B7 2
Coriobacteriaceae bacterium JC110 4 2
Coriobacteriaceae bacterium phI 1
Corynebacterium accolens ATCC 49725 1
Corynebacterium durum F0235 2
Cyanobacteria/Melainabacteria group 17 1
Dactylococcopsis 2
Desulfobacula toluolica 2
Desulfosporosinus youngiae DSM 17734 1
Dethiobacter alkaliphilus AHT 1 1
Detolaasinbacter 2
Dialister sp. YIT 11850 3
Dickeya paradisiaca NCPPB 2511 1
Dickeya zeae MK19 1
dicots 21
Dolichospermum compactum NIES-806 1
Dorea formicigenerans ATCC 27755 5
Dorea longicatena AGR2136 2
DSM 22248 2
Eggerthella lenta 1_1_60AFAA 3
Embryophyta 21
Empedobacter brevis NBRC 14943 = ATCC 43319 1
Endozoicomonas montiporae CL-33 1
Enterobacter asburiae LF7a 1
Enterobacter cloacae UCI 49 1
Enterobacter cloacae UCICRE 3 1
Enterococcus faecalis EnGen0285 1
Enterococcus faecium E4453 2
Enterorhabdus mucosicola DSM 19490 2
environmental samples 1 1
Erysipelotrichaceae bacterium GAM147 2
Escherichia coli HVH 175 (4-3405184) 1
Escherichia coli M17 1
Escherichia coli O15:H11 1
Escherichia coli O157 1
Escherichia coli O55:H7 1
Escherichia coli STEC_DG131-3 1
euasterids I 21
Eubacterium brachy ATCC 33089 1
Eubacterium cylindroides ATCC 27803 2
Eubacterium limosum KIST612 1
Eubacterium plautii ATCC 29863 1
Eubacterium ramulus ATCC 29099 5
Euphyllophyta 21
Eutheria 1
Faecalicoccus pleomorphus ATCC 29734 2
FCB group 484 1
Flavisolibacter sp. 17J28-1 2
Fluoribacter dumoffii NY 23 1
Formosa agariphila KMM 3901 1
Fremyella diplosiphon NIES-3275 2
Fungi/Metazoa group 2
Fusobacterium hwasookii ChDC F206 1
Fusobacterium nucleatum subsp. animalis 21_1A 1
Geminocystis herdmanii PCC 6308 1
Granulicatella adiacens ATCC 49175 1
H11N8 subtype 1
Haemophilus haemolyticus M19107 1
Haemophilus influenzae PittAA 1
Haemophilus parahaemolyticus ATCC 10014 1
Haemophilus parahaemolyticus G321 1
Haemophilus paraphrohaemolyticus HK411 2
Haemophilus pittmaniae CCUG 48703 1
Haloplasma contractile SSD-17B 1
Halorubrum distributum JCM 9100 1
Herpes simplex virus (type 1 / strain A44) 1
HIV-1 M:CRF02 233Hald 1
Hoeflea phototrophica DFL-43 1
Holdemania filiformis DSM 12042 5
Holdemania massiliensis AP2 2
Human papillomavirus unidentified type (RTRX1) 1
IFM 1018 3
Igbo Ora virus 1
Immundisolibacterales 3
Influenza A virus (A/Bangkok(H3N2)) 1
Influenza A virus (A/China/C1-8/2002(H3N2)) 1
Influenza A virus (A/duck/Hunan/344/2006(H5N1)) 1
Influenza A virus (A/northern shoveler/Alaska/17/2007(H3N8)) 1
Influenza A virus (A/pigeon/Rostov-on-Don/6/07(H5N1)) 1
Influenza A virus (A/Shiga/2/91(H3N2)) 1
Influenza B virus (B/New York/02/2007) 1
Influenza B virus (B/Oregon/01/2007) 1
Influenza B virus (B/Pennsylvania/06/2007) 1
Jonquetella anthropi DSM 22815 1
Klebsiella michiganensis M5al 1
Klebsiella oxytoca BRL6-2 1
Klebsiella quasipneumoniae subsp. similipneumoniae MGH 44 1
Klebsiella variicola MGH 80 1
Komagataeibacter hansenii ATCC 23769 1
Kosakonia radicincitans DSM 16656 1
Labrenzia alexandrii DFL-11 1
Lachnospiraceae bacterium oral taxon 082 str. F0431 1
Lactobacillales incertae sedis 52
Lactobacillus amylovorus DSM 20531 1
Lactobacillus casei subsp. casei ATCC 393 1
Lactobacillus gasseri 202-4 1
Lactobacillus gasseri DSM 14869 1
Lactobacillus salivarius str. Ren 1
Leadbetterella 8 2
Leptospira biflexa serovar Patoc 1
Leptospira interrogans serovar Copenhageni/Icterohaemorrhagiae 1
Leptospira interrogans serovar Linhai 1
Leptospira interrogans serovar Manilae 1
lice endosymbionts 1
Listeria monocytogenes FSL J1-208 1
Mastadenovirus 1 1
mealybug secondary endosymbionts 1
Megamonas funiformis YIT 11815 1 1
Megamonas rupellensis DSM 19944 1
Megasphaera elsdenii 14-14 1
Mesangiospermae 21
Mesorhizobium ciceri biovar biserrulae 1
Mesorhizobium ciceri ca181 1
Methanobrevibacter smithii DSM 2375 1
methanotroph E10 1
Methylacidiphilum fumariolicum SolV 1
Microcystis aeruginosa PCC 7806 1
Microcystis aeruginosa PCC 7806SL 1
Mitsuokella jalaludinii DSM 13811 1
Mobiluncus/Falcivibrio group 51
Moorella group 4
Mycoplasma gallisepticum str. R 1
Mycoplasma mycoides subsp. capri LC 1
Myroides odoratus DSM 2801 1
Myxococcus fulvus 124B02 1
Mzabimycetaceae 1
Negativicoccus succinicivorans DORA_17_25 1
Neorhizobium galegae bv. officinalis 1
NIES-204 2
Nitrosospira briensis C-128 1
Nodularia spumigena CCY9414 1
Nonlabens 7 3
Nonlabens marinus S1-08 1
Norovirus noodle salad/Stuttgart21334/2006/DEU 1
Nostoc carneum NIES-2107 1
Nostoc linckia NIES-25 1
Oceanobacillus kimchii X50 1
Odoribacter laneus JCM 16069 2
Oenococcus kitaharae DSM 17330 1
oligotrophic marine Gammaproteobacteria group 1
OM182 clade 1
Oribacterium sinus F0268 1
Oscillibacter ruminantium GH1 3
Paenibacillus durus ATCC 35681 1
Parabacteroides distasonis CL03T12C09 1
Parabacteroides distasonis str. 3999B T(B) 4 2
Parabacteroides distasonis str. 3999B T(B) 6 1
Parabacteroides goldsteinii dnLKV18 1
Parabacteroides johnsonii CL02T12C29 1
Parabasalia 1
Paraprevotella clara str. YIT 11840 3
Pasteurella multocida subsp. multocida P1062 1
Pediococcus acidilactici 7_4 1
Peptoniphilus grossensis ph5 1
Peptoniphilus lacrimalis DNF00528 1
Peptostreptococcus anaerobius DSM 2949 1
Plasmodium cynomolgi (strain Ceylon) 1
Plasmodium cynomolgi (strain London) 1
Plasmodium falciparum (isolate mad20 / papua new guinea) 1
Plasmodium falciparum (isolate TAK 9) 1
Porphyromonas bennonis DSM 23058 1
Porphyromonas somerae DSM 23386 2
Porphyromonas uenonis DSM 23387 3
Prevotella bivia DNF00650 2
Prevotella corporis DSM 18810 1
Prevotella disiens ATCC 29426 1
Prevotella scopos JCM 17725 2
Prevotella sp. 4401737 3
Prevotella stercorea DSM 18206 2
primary endosymbiont of Heteropsylla cubana 1
Providencia sneebia DSM 19967 1
Pseudomonas amygdali pv. tabaci 1
Pseudomonas fluorescens NCIMB 11764 1
Pseudomonas fluorescens Q2-87 1
Pseudomonas fluorescens R124 1
Pseudomonas fluorescens WH6 1
Pseudomonas moraviensis R28-S 1
Pseudomonas putida S13.1.2 1
Pseudomonas stutzeri subgroup 3
Pseudomonas syringae group pathovars incertae sedis 1
Pseudomonas syringae pv. actinidiae 1
Pseudomonas syringae pv. syringae SM 1
Rhizobium etli 8C-3 1
Rhizobium leguminosarum (BIOVAR PHASEOLI) 1