Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank	Bacteria	BiomeSight 1843 Samples	Thryve 1362 Samples	uBiome 797 Samples	CosmosId 41 Samples	es-xenogene 36 Samples	SequentiaBiotech 36 Samples	custom 26 Samples	BiomeSightRdp 26 Samples	Microba 22 Samples	AmericanGut 18 Samples	Medivere 7 Samples	Thorne 4 Samples
biotype	Haemophilus influenzae aegyptius							1
biotype	Mycobacterium tuberculosis variant caprae	1
biotype	Mycobacterium tuberculosis variant pinnipedii	187
clade						5		1
clade						2			10
clade	50 kb inversion clade	469	11			1	2		1			3
clade	Alveolata							2
clade	Amniota							1	5
clade	ant endosymbionts	429				4						6
clade	ant, tsetse, mealybug, aphid, etc. endosymbionts	441		1		4						6
clade	aphid secondary symbionts	20				1
clade	Archelosauria								2
clade	Archosauria								2
clade	asterids			18					10
clade	Bacteria candidate phyla			200	5	3		1					4
clade	Bacteroidetes/Chlorobi group	1838	1341	789	35	27	36	26	21	21	18	7	4
clade	Bilateria	429	8	11		4	1	1	11			1
clade	Boreoeutheria							1	4
clade	Caldiserica/Cryosericota group	1	10			1
clade	campanulids								10
clade	Candidatus Baumannia					1
clade	Candidatus Dependentiae					3
clade	Candidatus Uzinura					1
clade	Coelurosauria								2
clade	core chlorophytes								1
clade	core genistoids	470	11			1	2		1			3
clade	Cyanobacteria/Melainabacteria group	1730	934	31		4	18	6	10		7	7	4
clade	Deuterostomia	5				1		1	10
clade	Dicondylia	260	7	11		4	1		11			1
clade	Dinosauria								2
clade	Dipnotetrapodomorpha	5				1		1	10
clade	Ditrysia								8
clade	dothideomyceta							1
clade	Ecdysozoa	260	7	11		4	1		11			1
clade	Embryophyta	472	11	18		1	2		10			3
clade	eudicotyledons	472	11	18		1	2		10			3
clade	Eumetazoa	456	8	11		4	1	1	11			1
clade	Euphyllophyta	472	11	18		1	2		10			3
clade	Euteleostomi	5				1		1	10
clade	Eutheria							1	4
clade	fabids	469	11			1	2		1			3
clade	FCB group	1838	1341	789	35	27	36	26	21	22	18	7	4
clade	genistoids sensu lato	469	11			1	2		1			3
clade	Gnathostomata	5				1		1	10
clade	Gunneridae	472	11	18		1	2		10			3
clade	Heliantheae alliance								10
clade	lamiids			18
clade	leotiomyceta							4				1
clade	lice endosymbionts			1
clade	Lophotrochozoa	318	1			1			1
clade	Luna-1 subcluster	2	3	1		3							3
clade	Mandibulata	260	7	11		4	1		11			1
clade	mealybug secondary endosymbionts					1
clade	Mesangiospermae	472	11	18		1	2		10			3
clade	Metamonada			1
clade	Methanomada group	474	279	220	5	20	16	12	9	2	11	7
clade	Nitrospinae/Tectomicrobia group	5	5
clade	Obtectomera								8
clade	OM182 clade			1
clade	OMG group			1
clade	Opisthokonta	456	8	11		12	1	7	10		13	6	3
clade	Panarthropoda	260	7	11		4	1		11			1
clade	Pancrustacea	260	7	11		4	1		11			1
clade	Patescibacteria group					1
clade	Pentapetalae	472	11	18		1	2		10			3
clade	Protostomia	424	8	11		4	1		11			1
clade	PVC group	1682	1189	568	18	27	29	15	12	10	14	5	4
clade	Rhizaria							2	2
clade	rosids	469	11			1	2		1			3
clade	saccharomyceta					8		7				6	3
clade	Sar			2				4	2
clade	SAR116 cluster					1
clade	Sauria								2
clade	Saurischia								2
clade	Sauropsida								2
clade	sordariomyceta							4
clade	Spermatophyta	472	11	18		1	2		10			3
clade	Spiralia	318	1			1			1
clade	Stenosarchaea group	20	8	10		17		6					2
clade	Stramenopiles			2
clade	sulfur-oxidizing symbionts			1		1
clade	TACK group	29	7					1
clade	Teleostomi	5				1		1	10
clade	Terrabacteria group	1838	1341	791	35	28	36	26	21	22	18	7	4
clade	Tetrapoda	5				1		1	10
clade	Theria							1	4
clade	Theropoda								2
clade	Tracheophyta	472	11	18		1	2		10			3
clade	Vertebrata	5				1		1	10
class						5		1
class													1
class								1
class	Acidimicrobiia	235	497	2		1		3				3	4
class	Acidithiobacillia		42			1		1					4
class	Acidobacteriia	305	891	111		4		2	2			2	4
class	Aconoidasida							2
class	Actinomycetia	1829	1343	784	35	28	35	18	21	19	17	7	4
class	Agaricomycetes							1
class	algae							2	2
class	Alphaproteobacteria	1788	1327	438	4	20	32	11	21	15	7	7	4
class	Amphibia	5				1			5
class	Anaerolineae	766	313	9		4		1	5			7	4
class	Anthozoa	36				1
class	Aquificae	11	101			4		3	4				4
class	Archaeoglobi	1	1			2		2
class	Ardenticatenia		21			1		3					4
class	Armatimonadia	1	1
class	Aves								2
class	Bacilli	1842	1400	787	34	28	36	23	21	21	18	7	4
class	Bacteroidia	1842	1400	789	35	28	36	26	21	21	18	7	4
class	Balneolia	68	726				7	2	3
class	Betaproteobacteria	1834	1388	746	33	22	36	18	21	17	18	7	4
class	Bivalvia	241	1
class	Blastocatellia		170	1		3			1
class	Caldilineae	590	453			3		2	5			7	3
class	Caldisericia	1	10			1
class	Calditrichia	346	15			1			1			7
class	Candidatus Babeliae					3
class	Candidatus Brocadiia	12				1
class	Chitinispirillia		19						2
class	Chitinivibrionia		2
class	Chitinophagia	835	1091	5	5	4		1	14		1	6	4
class	Chlamydiia	166	136			1		1	1			1	4
class	Chlorobia	1506	97	1		4		1	11			2	4
class	Chloroflexia	4	70	2		1	14	1					4
class	Chlorophyceae								1
class	Chrysiogenetes	305	19			1		1	1				1
class	Chthonomonadetes	6	166			3
class	Clostridia	1842	1400	791	35	28	36	26	21	21	18	7	4
class	Conoidasida							3
class	Coprothermobacteria	15	83	7
class	Coriobacteriia	1824	1394	786	35	28	36	19	21	15	18	7	4
class	Cytophagia	1779	1204	7		4	12	4	13			6	4
class	Deferribacteres	477	125	1		4		3	3			4	4
class	Dehalococcoidia	102	245	1	1	4		1	2				4
class	Deinococci	1142	291	7		4	13	1	11			7	4
class	Deltaproteobacteria	1817	1349	647	21	28	33	23	21	15	14	7	4
class	Dictyoglomia		105		2	1							2
class	Dothideomycetes							1
class	Elusimicrobia	8	91	7		1	19		15		3	7
class	Endomicrobia					1							2
class	Epsilonproteobacteria	1017	619	266	3	28	10	10	9		7	7	4
class	Erysipelotrichia	1839	1399	785	34	22	36	15	21	14	17	7	4
class	Eurotiomycetes							4				1
class	Fibrobacteria	139	304	187		1		2					4
class	Fimbriimonadia	2	75			1
class	Flavobacteriia	1605	715	459	3	4	12	7	13	2	2	7	4
class	Florideophyceae										10
class	Fusobacteriia	931	767	144	4	28	7	10	6	2	2	6	4
class	Gammaproteobacteria	1836	1398	720	33	28	36	18	21	19	18	7	4
class	Gastropoda	109	1			1
class	Gemmatimonadetes	12	50	1		1	15	1	13			7	4
class	Gloeobacteria		12			1		1	1				4
class	Halobacteria	10	1					1					2
class	Holophagae	900	787					2	6
class	Hydrogenophilalia	880	267	6				1	3			1	1
class	Ignavibacteria	38	889	2		4	16	2	6				4
class	Insecta	260	7	11		4	1		11			1
class	Kiritimatiellae												1
class	Ktedonobacteria	190	26					1	1			3	4
class	Lentisphaeria		344	284	4	1	6	3	6	2	5		4
class	Limnochordia		4			1							4
class	Magnoliopsida	472	11	18		1	2		10			3
class	Malgrandaviricetes					2			10
class	Mammalia							1	4
class	Methanobacteria	474	283	220	5	21	16	12	9	2	11	7
class	Methanococci	1				15		6
class	Methanomicrobia	10	7	10		18		6
class	Methylacidiphilae	12			1	1
class	Mollicutes	1762	1249	167	1	4	25	7	20	1	2	6	4
class	Negativicutes	1837	1400	791	35	28	34	21	21	19	17	7	4
class	Nitriliruptoria	1093	102			1		3	1				4
class	Nitrososphaeria	14	1
class	Nitrospinia	5	5
class	Nitrospira	397	58	1		4		1				6	4
class	Oligoflexia	34	117	1	1	4		1	1			1	4
class	Oligosphaeria		50	1
class	Opitutae	1077	507	96	1	4	1	2	5			4	4
class	Phycisphaerae		2			4		1					4
class	Pisoniviricetes				1
class	Planctomycetia	24	128	1		4		1					4
class	Rhodothermia	160	89						1
class	Rhynchonellata								1
class	Rubrobacteria	16	137			3		3	2				4
class	Saccharomycetes					8		7				6	3
class	Saprospiria	84	211			4							4
class	Solibacteres		31	1
class	Sordariomycetes							4
class	Spartobacteria	34	63
class	Sphingobacteriia	1839	712	18		4	26	5	19		4	7	4
class	Spirochaetia	797	232	16		23		12	6			1	4
class	Synergistia	1364	547	236	3	6	1	3	12	2	1	7	4
class	Thermoanaerobaculia		86
class	Thermococci	4	1			2		3
class	Thermodesulfobacteria	174	60			1			1			2	4
class	Thermodesulfovibrionia Umezawa et al. 2021	268	7
class	Thermoflexia		4
class	Thermoleophilia	24	127						1				1
class	Thermolithobacteria		69
class	Thermomicrobia		30			1			2				4
class	Thermoplasmata		43	36				6		2
class	Thermoprotei	9
class	Thermotogae	65	48			4		1				6	4
class	Tissierellia	1820	1348	513	10	28	14	10	16		8	7	4
class	Tremellomycetes							1			13
class	unclassified Cyanobacteria					1
class	Ustilaginomycetes							3
class	Verrucomicrobiae	1559	1170	494	17	28	26	14	12	10	13	3	4
class	Vicinamibacteria					1							4
class	Zetaproteobacteria		40	1		1		1					4
cohort	Endopterygota					3			9
cohort	Paraneoptera	255	2	11		1			11
cohort	Polyneoptera	7	7				1					1
family		1
family													1
family													1
family													1
family													2
family													1
family	'Williamsiaceae'	2	6
family	Acanthopleuribacteraceae		60
family	Acaryochloridaceae		3
family	Acetobacteraceae	603	434	2	1	4	1	1	3	1		3	4
family	Acholeplasmataceae	1651	942	19		4	15	2	9			6	4
family	Acidaminococcaceae	1694	1290	565	24	27	22	12	17	14	13	7	4
family	Acidiferrobacteraceae		17			4							4
family	Acidimicrobiaceae	235	482			1		2				3
family	Acidithiobacillaceae		42			1		1					4
family	Acidobacteriaceae	304	242	87		4		1	2			2	4
family	Acidothermaceae		57			1
family	Actinomycetaceae	1453	1233	634	30	14	24	8	12	1	8	7	4
family	Actinopolymorphaceae	115	2			1
family	Actinopolysporaceae	393	249			1			5				3
family	Aerococcaceae	762	1152	80	2	4		3	10		1	7	4
family	Aeromonadaceae	408	278	7	1	4	4	1	1		3	2	4
family	Akkermansiaceae	1568	1213	789	29	28	36	15	10	17	18	4	4
family	Alcaligenaceae	1810	227	6		4	10	2	2		1	7	4
family	Alcanivoracaceae	236	22			1		1					4
family	Algiphilaceae		50
family	Alicyclobacillaceae	2	547			4	7	3	6				4
family	Alsobacteraceae		2
family	Alteromonadaceae	632	552			4		1	1	1	2		4
family	Amaranthaceae	4
family	Amoebophilaceae	1650	3			1		1				5	2
family	Anaerolineaceae	329	312	8		4		1	5				4
family	Anaeromyxobacteraceae	1	690		1	1		1					4
family	Anaeroplasmataceae	200	517	128			3	1	5		2	2
family	anamorphic Herpotrichiellaceae							1
family	Anaplasmataceae	497	28		1	4		1	2			2	4
family	Aphanizomenonaceae	1221	3			4			4			7
family	Aphanothecaceae	1	8			1		1					4
family	Aphididae	4							11
family	Aquificaceae	11	61			3		2	4
family	Archaeoglobaceae		1			2		2
family	Archangiaceae	76	97			1		1					4
family	Arcobacteraceae Waite et al. 2017	114	21	1		4		1				1	4
family	Ardenticatenaceae		21			1		3					4
family	Armatimonadaceae	1	1
family	Aspergillaceae							4				1
family	Asteraceae								10
family	Atopobiaceae	671	922	165	4	25	10	4	7			3	4
family	Aurantimonadaceae	22	17			1		1					4
family	Azonexaceae	159	23					1	1				4
family	Azospirillaceae	925	621	1		4	2	1	7	3		2	4
family	Babyloniidae	2
family	Bacillaceae	1703	1079	232	3	28	31	8	20		12	7	4
family	Bacillales Family X. Incertae Sedis	1826	733					3	10			7
family	Bacillidae	7	6				1					1
family	bacterial virus							1
family	Bacteriovoracaceae	8	81	1	1	1							1
family	Bacteroidaceae	1842	1400	783	35	28	35	26	21	21	18	7	4
family	Balneatrichaceae		29
family	Balneicellaceae									14
family	Balneolaceae	69	722				1	2	3
family	Barnesiellaceae		1130	514	17	28	11	11	9	11	18		4
family	Bartonellaceae	59	15			4		1					4
family	Bdellovibrionaceae	26	10			1		1	1			1	4
family	Beijerinckiaceae	57	15			4							4
family	Bernardetiaceae		136			1		2
family	Beutenbergiaceae					1							2
family	Bifidobacteriaceae	1820	1392	790	33	28	36	18	21	20	18	7	4
family	Blastocatellaceae		18	1					1
family	Blastochloridaceae	6				1							2
family	Blastocystidae			2
family	Blattabacteriaceae					4		1					4
family	Bogoriellaceae	20	45							4			3
family	Borreliaceae	19	2			4		4					3
family	Boseaceae		7	1		4		1					4
family	Brachyspiraceae	24		13		4		1					4
family	Braconidae								2
family	Bradymonadaceae					1							4
family	Bradyrhizobiaceae	74	59	11		4		1	1		1	1	4
family	Breoghaniaceae					1
family	Brevibacteriaceae	163	139	60		28		4			1	7	4
family	Brevinemataceae		5						1
family	Brucellaceae	194	49	25		4	4	1	3		1		4
family	Bruguierivoracaceae Li et al. 2021	7	28			4		1					3
family	Bryobacteraceae		19					1
family	Budviciaceae		308			4		1	1	16			3
family	Burkholderiaceae	1633	450	27		4	17	4	19	1	3	7	4
family	Caedimonadaceae					1
family	Caldicoprobacteraceae		48	236
family	Caldilineaceae	591	451			3		2	5			7	3
family	Caldisericaceae		10			1
family	Caldisphaeraceae	1
family	Calditrichaceae	346	15			1			1			7
family	Caliciviridae				1
family	Calotrichaceae	760	125			4		1				6	4
family	Campylobacteraceae	732	517	265	3	28	7	10	6		7	7	4
family	Candidatus Babeliaceae					3
family	Candidatus Brocadiaceae	12				1
family	Candidatus Competibacteraceae		184					2	1
family	Candidatus Desulfofervidaceae					1
family	Candidatus Methanomethylophilaceae			23
family	Candidatus Midichloriaceae			1		1
family	Candidatus Nanopelagicaceae					3		1					4
family	Candidatus Paracaedibacteraceae						1
family	Candidatus Scalinduaceae Lodha et al. 2021	12
family	Canidae								5
family	Cardiobacteriaceae	39	175	2		1		1					4
family	Carnobacteriaceae	1159	831	326	13	4	5	5	14	1	3	7	4
family	Catabacteriaceae		230	100	1		1		8	1		6
family	Catalimonadaceae		60
family	Catenulisporaceae		8			4							2
family	Caulobacteraceae	833	190	9		4		1	6		4	1	4
family	Celerinatantimonadaceae		6
family	Cellulomonadaceae	144	142		4	4		1					4
family	Cellvibrionaceae	137	89			4		1					4
family	Cenarchaeaceae DeLong and Preston 1996	8
family	Cesiribacteraceae		49
family	Chamaesiphonaceae		5			3
family	Chelatococcaceae	4	8			1
family	Chitinispirillaceae		19						2
family	Chitinivibrionaceae		2
family	Chitinophagaceae	842	1091	5	5	4		1	14		1	6	4
family	Chlamydiaceae	1	2			1		1					2
family	Chlorobiaceae	1506	97			4		1	11			2	4
family	Chloroflexaceae		3	2		1							1
family	Chlorogloeopsidaceae		17
family	Christensenellaceae		349	181	28	4	24	3	10	1	14	7	4
family	Chromatiaceae	1515	693	2		4	1	3	6			6	4
family	Chromobacteriaceae	236	125			12		4				1	4
family	Chroococcaceae	743	2			1						2
family	Chroococcidiopsidaceae	1				1		1					4
family	Chrysiogenaceae	309	19			1		1	1				1
family	Chthoniobacteraceae	34	12
family	Chthonomonadaceae	6	166			3
family	Clostridiaceae	1841	1400	788	35	28	36	26	21	18	17	7	4
family	Clostridiales Family XI. Incertae Sedis			217
family	Clostridiales Family XVI. Incertae Sedis	1038	69			1		4	3			2	4
family	Clostridiales Family XVII. Incertae Sedis	65	191		1	4		1	7			2	4
family	Coccidae	209							3
family	Coelosphaeriaceae	43
family	Cohaesibacteraceae		1			1							2
family	Coleofasciculaceae	13	5										1
family	Colwelliaceae	4	205			4		1	2				4
family	Comamonadaceae	1627	255	111		4	3	2	8		9	6	4
family	Conexibacteraceae	7	8
family	Coprobacillaceae Verbarg et al. 2014	1814	1059	394	30	2	5	6	14		11	7	2
family	Coprothermobacteraceae	15	83	7
family	Coriobacteriaceae	1828	1237	782	26	28	34	9	18		18	7	4
family	Corynebacteriaceae	935	779	444	13	28	8	5	12	2	7	1	4
family	Coxiellaceae	46	48	2		1		1				1	4
family	Crenotrichaceae	4
family	Criblamydiaceae		44
family	Crocinitomicaceae	2	28			1	3	1					3
family	Cryomorphaceae	2	124	1		1
family	Cryptococcaceae										13
family	Cryptosporangiaceae	1	1
family	Cryptosporidiidae							3
family	Cyanobacteriaceae	297	42									1	1
family	Cyanobacteriaceae	298	42									1
family	Cyanobiaceae Salazar et al., 2020	4	5	1		4		1					4
family	Cyanothecaceae					1
family	Cyclobacteriaceae		389			4		1					4
family	Cytophagaceae	1683	963	3		4	4	1	5			6	4
family	Debaryomycetaceae					8		4
family	Deferribacteraceae	481	148	1		4		3	3			4	4
family	Defluviitaleaceae		382	18			3	3	9
family	Dehalococcoidaceae	102	70		1	1		1	1				4
family	Deinococcaceae	867	201	6		4	1	1	3			4	4
family	Demequinaceae	18	82						1
family	Dermabacteraceae	342	98	55		4		1	1	1			4
family	Dermacoccaceae	16	33	2	1	1		1			1		4
family	Dermatophilaceae	2	10			1							4
family	Dermocarpellaceae		4			1
family	Desulfallaceae Watanabe et al. 2020	826	282			1		3	1			7	4
family	Desulfarculaceae		273			1							4
family	Desulfobacteraceae	432	769	2		15	2	11	7			2	4
family	Desulfobulbaceae	26	184			12	1	6					4
family	Desulfocapsaceae	16	17			6		6					4
family	Desulfohalobiaceae	318	84			3						7	2
family	Desulfomicrobiaceae	103	334			20		6	7				4
family	Desulfonatronaceae	321	48									2
family	Desulfovibrionaceae	1762	1225	647	21	28	32	19	15	15	14	7	4
family	Desulfurellaceae	6	13			11		2					3
family	Desulfurobacteriaceae		23			1
family	Desulfurococcaceae	3
family	Desulfuromonadaceae	929	123			18		7	9			5	4
family	Devosiaceae	606	85			4			2		1		4
family	Diapheromeridae		1
family	Dictyoglomaceae		105		2	1							2
family	Dientamoebidae			1
family	Dietziaceae	101	186	2		1				2			4
family	Dysgonomonadaceae	1461	862	46		4	4	9	7		2	7	4
family	Ectothiorhodospiraceae	1271	315	1		4		3	7			2	4
family	Edwardsiidae	36				1
family	Eggerthellaceae	1801	1366	774	35	28	35	19	21	15	14	7	4
family	Egibacteraceae					1
family	Egicoccaceae					1
family	Elioraeaceae		3
family	Elusimicrobiaceae	8	72	7		1			1		3
family	Emcibacteraceae		192										2
family	Endomicrobiaceae					1							2
family	Endozoicomonadaceae		6			1							2
family	Enterobacteriaceae	1767	829	594	30	28	32	17	21	19	17	7	4
family	Enterococcaceae	1690	490	140	29	28	28	14	17	6	11	4	4
family	Entomoplasmataceae	798	110			4		1	3			2	3
family	Eriococcidae		1	11
family	Erwiniaceae	438	430	177		4	4	2	1		11	2	4
family	Erysipelotrichaceae	1839	1399	785	34	22	36	15	20	14	17	7	4
family	Erythrobacteraceae	149	61	2		4		1			1		4
family	Eubacteriaceae	1830	1400	300	35	25	36	12	21	17	13	7	4
family	Eubacteriales Family XII. Incertae Sedis	516	797	18				6	8			6
family	Eubacteriales Family XIII. Incertae Sedis	1535	1308	657	19	8	31	6	21	1	12	7	4
family	Euzebyaceae	1092	96			1		1	1
family	Fabaceae	469	11			1	2		1			3
family	Fastidiosibacteraceae		16
family	Faucheaceae										10
family	Ferrimonadaceae	18	50			1							3
family	Ferrovaceae		5
family	Fervidobacteriaceae	23	1			4		1				1	3
family	Fibrobacteraceae	139	287	140		1		2					4
family	Fimbriimonadaceae	2	75			1
family	Flammeovirgaceae	413	432	1		4		3	1				4
family	Flavobacteriaceae	1605	631	456	1	4	3	7	13		2	7	4
family	Flexibacteraceae		8	1			2		5
family	Fortieaceae		16
family	four o'clock family								1
family	Francisellaceae	79	88	2		4		2				1	4
family	Frankiaceae	3	9			4		1					4
family	Fulvivirgaceae	10	180			4		2	1				3
family	Fusobacteriaceae	845	641	121	4	28	7	9	4	2	2	6	4
family	Gaiellaceae		53					2
family	Gallionellaceae	229	29			1		1			2		4
family	Geminicoccaceae		72						2
family	Gemmataceae	11	15	1		1		1					4
family	Gemmatimonadaceae	12	34	1		1		1					4
family	Geobacteraceae	108	78			4		5				1	4
family	Geodermatophilaceae	25	134	1		4			1				4
family	Gloeobacteraceae		12			1		1	1				4
family	Gloeotrichiaceae	3
family	Glycomycetaceae	90	192			1			2			1	2
family	Gomontiellaceae		114			1			2
family	Gomphosphaeriaceae	44
family	Gordoniaceae	74	134	1		4		1					4
family	Gottschalkiaceae		193			22		7	3				4
family	Gracilibacteraceae		608	9			3	3	7
family	Granulosicoccaceae		89			1							2
family	great apes							1
family	Hafniaceae	92	59	14	2	13	2	7	1				4
family	Hahellaceae	219	246			3		2	1
family	Halanaerobiaceae	396	308	1		4		3	9			2	4
family	Halieaceae		79			1		1					4
family	Haliscomenobacteraceae	1	118			3
family	Haloarculaceae	5	1
family	Halobacteriaceae	10	1					1					2
family	Halobacteriaceae Clade I	2						1
family	Halobacteriovoraceae	7	36			4		1					4
family	Halobacteroidaceae	58	493			1		3	3			4	3
family	Haloferacaceae	1						1
family	Halomonadaceae	697	582		1	4	2	4	3			3	4
family	Haloplasmataceae		37	1					2
family	Halorubraceae	2
family	Halothiobacillaceae	38	142					2					3
family	Hapalosiphonaceae					1
family	Helicobacteraceae	532	56	3		28		9	2			1	4
family	Heliobacteriaceae	804	289			1	4	2	9	6		5	4
family	Herpetosiphonaceae	1	6
family	Hesperiidae								8
family	Heteroleibleiniaceae		15
family	Holophagaceae	900	740					2	5
family	Holosporaceae				1	3
family	Hungateiclostridiaceae	592	726	142	7	4	35	1	8	6		6
family	Hydrogenophilaceae	886	274	5				1	3			1	1
family	Hydrogenothermaceae		29			1			1				3
family	Hyellaceae					1
family	Hymenobacteraceae	1220	248	2		4		1	9			1	4
family	Hyphomicrobiaceae	868	144			4		1	2		1	5	4
family	Hyphomonadaceae	117	762	1		2		1	5			3	4
family	Iamiaceae		28										2
family	Icacinaceae								6
family	Ichthyobacteriaceae					1
family	Idiomarinaceae	70	44			1		1	1				4
family	Ignavibacteriaceae	38	51	1		1							2
family	Ilumatobacteraceae		156										2
family	Immundisolibacteraceae					3
family	Intrasporangiaceae	72	84			4		1					4
family	Isosphaeraceae	8	5	1		4							4
family	Jatrophihabitantaceae		9			1
family	Jiangellaceae	30	15			4						1	3
family	Jonesiaceae	45	121										3
family	Kaistiaceae	13	42						1
family	Kallotenuaceae		21
family	Kangiellaceae		42			1
family	Kiloniellaceae	417	539				5		2
family	Kineosporiaceae	22	105			1			1				3
family	Kofleriaceae	151	37			3							4
family	Kordiimonadaceae		211
family	Kosmotogaceae	18	14			1		1					4
family	Kribbellaceae	107	369									5
family	Ktedonobacteraceae		1
family	Kytococcaceae	1		2		1							3
family	Labilitrichaceae		45										3
family	Lachnospiraceae	1842	1400	790	35	28	36	26	21	21	18	7	4
family	Lacipirellulaceae		17
family	Lactobacillaceae	1788	1400	791	31	28	36	11	16	13	18	7	4
family	Laqueidae								1
family	Lawsonellaceae						1						3
family	Legionellaceae	1222	96	1		4		1	8			3	4
family	Lentisphaeraceae		4
family	Leptolyngbyaceae	419	5	1		4		1				2	4
family	Leptospiraceae	484	75			4		4	2				4
family	Leptotrichiaceae	208	265	38		4		2	2			1	4
family	Leuconostocaceae	1420	1274	102	3	4	9	1	9	6	2	6
family	Lewinellaceae	82	9
family	Limnochordaceae		4			1							4
family	Listeriaceae	1236	336	1	1	12		4	3		4	1	4
family	Litoricolaceae	132	42						1			3
family	Luteibaculaceae Bowman 2020		1
family	Magnetococcaceae		23			1		1					4
family	Maricaulaceae	18	39			1
family	Marinifilaceae		333			4		1	4				4
family	Marinilabiliaceae		680	1		1	7		6				4
family	Marinobacteraceae Liao et al. 2020	89	208			4		1		1			4
family	Mariprofundaceae		40	1		1		1					4
family	Marivirgaceae		2			1		2
family	Melioribacteraceae		881			4	16	2	6
family	Merismopediaceae						3						1
family	Mesoaciditogaceae		7
family	Methanobacteriaceae	474	278	220	5	21	3	12	6	2	11	1
family	Methanocaldococcaceae	1				1		5
family	Methanococcaceae	1				16		6
family	Methanocorpusculaceae	4	1	1
family	Methanomassiliicoccaceae		43	31				6		2
family	Methanoregulaceae		2
family	Methanosarcinaceae	7	3			18		6
family	Methanotrichaceae		1
family	Methylacidiphilaceae	12			1	1
family	Methylobacteriaceae	117	73	4		4		1					4
family	Methylococcaceae	9	262	1		4		3					4
family	Methylocystaceae	30	23			4		1					4
family	Methylophilaceae	774	314			1		1	1			2	4
family	Methylothermaceae		60
family	Microbacteriaceae	606	768	49		4		2	5		3	5	4
family	Microbulbiferaceae	9	1			4		1					4
family	Micrococcaceae	694	698	151	22	21	25	8	4		1	6	4
family	Microcoleaceae	398	399	1		4		1	1				4
family	Microcystaceae	9				1		2
family	Micromonosporaceae	565	340	1		4		1	4		1	6	4
family	Micropepsaceae		15
family	Microscillaceae		189			1
family	Microviridae					2			10			7
family	Mooreiaceae		10
family	Moraxellaceae	932	641	21	4	28	7	4	11	8	5	6	4
family	Morganellaceae	276	624	17	1	27	17	5	11	1	10	7	4
family	Moritellaceae	1	1			1		1
family	Motilibacteraceae		19
family	Muribaculaceae					4		2	1				4
family	Mycobacteriaceae	304	128	59	2	4		1	2			1	4
family	Mycoplasmataceae	1527	966	11		4	6	5	16	1		5	4
family	Mycoplasmoidaceae		72
family	Myoviridae					5		1
family	Myxococcaceae	1	4			4		1					4
family	Mzabimycetaceae		183
family	Nakamurellaceae		2			4			1				4
family	Nannocystaceae	114	28									1
family	Natranaerobiaceae		52			1							2
family	Nautiliaceae	5	42			1		1	2				4
family	Nectriaceae							3
family	Neisseriaceae	580	215	68	5	4	10	2	8	3	3	7	4
family	Neomegalonemataceae		25						1
family	Nitratiruptoraceae Waite et al. 2017		2			1
family	Nitriliruptoraceae	6	6					2
family	Nitrosomonadaceae	18	409	8		4	4	3	3				4
family	Nitrosopumilaceae	6	6					1
family	Nitrososphaeraceae	14	1
family	Nitrospinaceae	5	5
family	Nitrospiraceae	397	58	1		4		1				5	4
family	Nocardiaceae	227	40	21		4		1	2			1	4
family	Nocardioidaceae	275	530	1		4		2				6	4
family	Nocardiopsaceae		409			4		1	1		2		4
family	Nostocaceae	1570	5			4	2	1	5			7	4
family	Oceanospirillaceae	464	381			4		1			1		4
family	Odoribacteraceae	1713	1264	620	27	28	33	19	15	17	16	7	4
family	Oleiphilaceae					3
family	Oligoflexaceae		1
family	Oligosphaeraceae		50
family	Opitutaceae	18	55		1	4		1	1				4
family	Orbaceae		14			4		1					2
family	Ornithinimicrobiaceae	42	20			4		1					4
family	Oscillatoriaceae	852	148			4
family	Oscillochloridaceae	1	1
family	Oscillospiraceae	1838	1400	787	35	28	36	21	21	20	18	7	4
family	Oxalobacteraceae	1140	592	258	4	21	25	6	10		8	7	4
family	Paenibacillaceae	1468	1213	1		4	29	4	10		6	7	4
family	Paludibacteraceae	5	154	1		4	3	2	1		2		4
family	Parachlamydiaceae	3	3			1
family	Parvibaculaceae		2			4							1
family	Parvoviridae								2
family	Parvularculaceae		32			1
family	Pasteurellaceae	1494	1085	548	19	6	29	9	16	7	17	7	4
family	Pasteuriaceae	79
family	Patulibacteraceae	1	6
family	Pectobacteriaceae	82	543	2		4	1	1	1			3	4
family	Pelagibacteraceae		4			1		1					3
family	Peptococcaceae	1816	1313	520	4	28	24	11	14		9	7	4
family	Peptoniphilaceae	1784	1303	506	9	27	7	7	16		8	7	4
family	Peptostreptococcaceae	1617	1395	789	33	22	30	19	13	9	15	7	4
family	Perlucidibacaceae Liao et al. 2020		3
family	Persicobacteraceae	1	96			4			1
family	Petrotogaceae	25	28			4		1				6	4
family	phages with long non-contractile tails							1
family	Phreatobacteraceae		1			1							4
family	Phycisphaeraceae		2			1							4
family	Phyllobacteriaceae	40	44	35		5		3			1		4
family	Pirellulaceae Dedysh et al. 2020	4	46			1							4
family	Piscirickettsiaceae	227	427	2		4		3			1		4
family	Planctomycetaceae	12	121			1		1					4
family	Planococcaceae	938	1171	39		17	22	5	21		6	7	4
family	Plasmodiidae							2
family	Pleioneaceae		4
family	Pleomorphomonadaceae	7	8			1
family	Polyangiaceae	69	6	1		4		1	1				4
family	Porphyromonadaceae	1828	1386	524	22	22	35	8	16	3	10	7	4
family	Porticoccaceae		2
family	Prevotellaceae	1805	1389	569	16	28	21	20	20	3	17	7	4
family	Prochloraceae	2	2			4		1					4
family	Prochlorococcaceae			1
family	Prochlorotrichaceae		8			3
family	Prolixibacteraceae		189			1		1	4				4
family	Promicromonosporaceae	6	77			4				2	1		4
family	Propionibacteriaceae	71	604	118	9	21	13	4	4			4	4
family	Proteidae	5				1			5
family	Proteinivoraceae	1440	595					7	8			7
family	Pseudanabaenaceae	526	8			4			2			2
family	Pseudoalteromonadaceae	39	54			4		1				1	4
family	Pseudococcidae	53	2			1
family	Pseudomonadaceae	568	529	51	2	28	9	9	4		11	5	4
family	Pseudonocardiaceae	520	470			4		1	3			4	4
family	Pseudoxanthobacteraceae		5
family	Psychromonadaceae	23	46			4
family	Puniceicoccaceae	1070	484	7		1		1	5			4
family	Pyrinomonadaceae		49
family	Rarobacteraceae		72
family	Reichenbachiellaceae		49
family	Reyranellaceae		5
family	Rhabdochlamydiaceae	150
family	Rhizobiaceae	526	99	8		15	14	4	2		1	7	4
family	Rhodanobacteraceae	1253	249			4		1	3			3	4
family	Rhodobacteraceae	408	338	4	1	4	4	1	4		1	7	4
family	Rhodobiaceae	5	11	3		4							4
family	Rhodocyclaceae	1095	445	70		1		1	1		1		4
family	Rhodospirillaceae	1490	1012	371		4	25	5	19	15		7	4
family	Rhodothalassiaceae	18	15						1
family	Rhodothermaceae	1693	210			4	6	2	7			1	4
family	Rhodovibrionaceae	370	465				1		8
family	Rickettsiaceae	932	251			4		1	10			6	4
family	Rikenellaceae	46	1360	734	34	28	35	21	10	19	18	7	4
family	Rivulariaceae	817	126			4						6
family	Robiginitomaculaceae		49						2
family	Roseiarcaceae		4
family	Roseiflexaceae	2	15			1							4
family	Roseivirgaceae	1	55
family	Roseobacteraceae Pujalte et al. 2014	115	78	1		4		1				2	4
family	Ruaniaceae							1					3
family	Rubricoccaceae		11
family	Rubritaleaceae	619	191						2	6
family	Rubrobacteraceae	16	96			3		3	2				4
family	Ruminococcaceae	1842	1400	787	28	4	36	3	21	21	18	7
family	Saccharomycetaceae					8		7				5
family	Saccharospirillaceae	48	518			1			1				3
family	Salinibacteraceae		4
family	Salinisphaeraceae		19			1
family	Salinivirgaceae					1							1
family	Salisaetaceae	326	168					1	4
family	Sandaracinaceae		16			1
family	Sanguibacteraceae	6	5			1						1	3
family	Saprospiraceae	84	84			1							4
family	Schleiferiaceae		20			1
family	Scolopacidae								3
family	Scytonemataceae		4			4
family	Sedimentisphaeraceae					3		1					1
family	Segniliparaceae		40			1		2					2
family	Selenomonadaceae	1813	817	98	5	28	12	11	16	1		7	4
family	Shewanellaceae	1134	183			27		10	8			5	4
family	Simkaniaceae		12			1
family	Sinobacteraceae	1362	181	2		1		1	9				4
family	Sneathiellaceae		13
family	Solanaceae			11
family	Solibacteraceae	2		1		1
family	Solirubrobacteraceae	15	28
family	Sphaerobacteraceae		49						1				2
family	Sphaerochaetaceae	4	2			1		1					4
family	Sphingobacteriaceae	1837	712	4		4	24	5	19		4	7	4
family	Sphingomonadaceae	681	730	17		4	14	2	7		1	6	4
family	Sphingosinicellaceae		16			4			1				2
family	Spirillaceae		4				14
family	Spirochaetaceae	435	152			4		1	3			1	4
family	Spiroplasmataceae		487			4		1	6				4
family	Spirosomaceae	1458	792			4	2	3	4			6	4
family	Spirulinaceae		12
family	Spongiibacteraceae		213			1			1				2
family	Sporichthyaceae	7	26										2
family	Sporolactobacillaceae	543	196			1		2				1	4
family	Sporomusaceae	1210	959	34		4		3	5			7	4
family	Staphylinidae					3			3
family	Staphylococcaceae	1410	431	207	3	28	3	11	9	6	5	5	4
family	Stappiaceae		4			4		1					4
family	Stellaceae		244						1				4
family	Steroidobacteraceae	19	38
family	Sterolibacteriaceae	281	67	11		4		1					4
family	Streptococcaceae	1824	1397	775	34	28	36	19	21	17	16	7	4
family	Streptomycetaceae	362	310			28	2	4			2	6	4
family	Streptosporangiaceae	741	208			1		1	1			2	4
family	Succinivibrionaceae	502	318	15	2	18		4			3		4
family	Sulfolobaceae	5
family	Sulfuricellaceae Watanabe et al. 2014		6			1		1					4
family	Sulfurovaceae Waite et al. 2017		5			1		1					4
family	Sutterellaceae	1805	1355	712	31	3	36	14	20	16	18	7	4
family	Symbiobacteriaceae	1140	386			3		3	7				4
family	Synechococcaceae	529	10	1		4		1					4
family	Synergistaceae	1354	547	236	3	6	1	3	11	2	1	7	4
family	Syntrophaceae	240	73			4		1	1			1	4
family	Syntrophobacteraceae	533	487			1		2	7			2	4
family	Syntrophomonadaceae	1526	660	11		4		3	4			5	4
family	Syntrophorhabdaceae		40	1
family	Syntrophotaleaceae	20											2
family	Tannerellaceae	1815	1307	719	35	28	34	21	16	18	18	7	4
family	Temperatibacteraceae		1
family	Tepidamorphaceae		6
family	Tepidanaerobacteraceae	644	16			1		1				2	4
family	Terasakiellaceae					1
family	Terrimicrobiaceae		4
family	Thalassobaculaceae	79	3						2
family	Thalassospiraceae	416	42	359		1			3				4
family	Thermaceae	642	94	1		4		1	2			5	4
family	Thermoactinomycetaceae	1190	734	1		4		4	4			6	4
family	Thermoanaerobacteraceae	1579	408	212		4		4	11			4	4
family	Thermoanaerobacterales Family III. Incertae Sedis	1774	225			25	1	7	13			7	4
family	Thermoanaerobacterales Family IV. Incertae Sedis		42					1					2
family	Thermoanaerobaculaceae		86
family	Thermococcaceae	4	1			2		3
family	Thermodesulfobacteriaceae	174	60			1			1			2	4
family	Thermodesulfobiaceae	16	104	17		1	5	2	2
family	Thermodesulfovibrionaceae	388	20			3						6
family	Thermoflexaceae		4
family	Thermoflexibacteraceae		121
family	Thermogemmatisporaceae	190	7						1			3	4
family	Thermoguttaceae Dedysh et al. 2020		40			1
family	Thermohalobacteraceae Spring 2020		1069				4	4	8				4
family	Thermoleophilaceae		65						1
family	Thermolithobacteraceae		69
family	Thermomicrobiaceae					1
family	Thermomonosporaceae	589	79			4		1	2			3	4
family	Thermonemataceae		43						4
family	Thermoproteaceae	2
family	Thermosediminibacteraceae	120	67			1						6	3
family	Thermosporotrichaceae		19
family	Thermosynechococcaceae					1
family	Thermotogaceae	66	1			4		1				6	4
family	Thermotomaculaceae		18						1
family	Thioalkalibacteraceae	27	1										1
family	Thioalkalispiraceae		58	1		3							4
family	Thiobacillaceae	318	63	6		1						1	3
family	Thiofilaceae		3
family	Thiolinaceae		2
family	Thioprofundaceae		7
family	Thiotrichaceae	1267	94	1		1			11		3	3	1
family	Thiovulaceae Waite et al. 2017	13	12			3		1					4
family	Thorselliaceae		69
family	Tissierellaceae	100	650	1	1	24	2	9	5			3	4
family	Treponemataceae	433	65			23		9	5			1	4
family	Trichocoleusaceae		3
family	Trichocomaceae											1
family	Tropherymataceae		79			1
family	Trueperaceae		25										1
family	Tsukamurellaceae	99	6			4			1			1	4
family	Turicibacteraceae Verbarg et al. 2014	1222	821	475	16	4	8	6	16	3	11	5	4
family	unclassified Actinobacteria (class) (miscellaneous)					1
family	unclassified Bacillales		19	40
family	unclassified Burkholderiales	200	198	18	15	4					3	3
family	unclassified Clostridiales		719	782	32	4	35	6	8	3	1
family	unclassified Rickettsiales					4
family	Unionidae	242	1
family	Ustilaginaceae							3
family	Vallitaleaceae Quemeneur et al.		87				3	4	9				4
family	Veillonellaceae	1841	1393	743	30	28	32	16	17	9	16	7	4
family	Verrucomicrobia subdivision 3	18	30					2
family	Verrucomicrobiaceae	1556	269	220		1		3	2		1	3	4
family	Vibrionaceae	111	124			4		5				4	4
family	Vicinamibacteraceae					1							4
family	Victivallaceae		339	284	4		6	2	6		5
family	Viviparidae	107	1			1
family	Vulgatibacteraceae												3
family	Waddliaceae	12	1
family	Weeksellaceae	111	115	8		4		1	1		1		4
family	Wenzhouxiangellaceae		48			1
family	Woeseiaceae					1
family	Xanthobacteraceae	37	21			1		1				6	4
family	Xanthomonadaceae	1502	362	19		4		4	9	1	7	6	4
family	Xenococcaceae	1
family	Yersiniaceae	1373	215	20	2	22	6	10	10		13		4
family	Zoogloeaceae	444	163	1		4	1	1	1		2	3	4
family	Zymomonadaceae	1	1			13		3					4
forma specialis	Buchnera aphidicola (Acyrthosiphon kondoi)					1
forma specialis	Buchnera aphidicola (Acyrthosiphon pisum)					2
forma specialis	Buchnera aphidicola (Aphis glycines)					1
forma specialis	Buchnera aphidicola (Cinara cedri)					1
forma specialis	Buchnera aphidicola (Cinara confinis)					1
forma specialis	Buchnera aphidicola (Cinara pseudotaxifoliae)					1
forma specialis	Buchnera aphidicola (Cinara tujafilina)					1
forma specialis	Buchnera aphidicola (Diuraphis noxia)					1
forma specialis	Buchnera aphidicola (Myzus persicae)					4
forma specialis	Buchnera aphidicola (Schizaphis graminum)					1
forma specialis	Buchnera aphidicola (Schlechtendalia chinensis)					1
forma specialis	Buchnera aphidicola (Tuberolachnus salignus)					1
forma specialis	Buchnera aphidicola (Uroleucon ambrosiae)					1
forma specialis	cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko					1
forma specialis	endosymbiont of Bathymodiolus septemdierum str. Myojin knoll					1
forma specialis	primary endosymbiont of Heteropsylla cubana					1
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis					1
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina morsitans					4
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)					3
genus													1
genus													1
genus													1
genus								1
genus													2
genus													1
genus													1
genus								1
genus								1					4
genus													1
genus													4
genus													2
genus								1
genus													1
genus													2
genus													1
genus													1
genus								1					4
genus	'Grimontella'									1
genus	'Haloanella'	2
genus	'Kouleothrix'	2
genus	'Terrahaemophilus'							1
genus	Abiotrophia	106	167	9	2			2	2				3
genus	Absiella	397	469		12			1	6			1
genus	Abyssicoccus												2
genus	Abyssivirga							1
genus	Acanthopleuribacter		60
genus	Acaryochloris		3
genus	Accumulibacter					3							4
genus	Acetanaerobacterium		691	123			1	3	9
genus	Acetatifactor		1277	2	1			3	4
genus	Acetilactobacillus					3
genus	Acetitomaculum		974	138			1	3	3
genus	Acetivibrio	1811	1296	32	2	4	26	9	9			7	4
genus	Acetoanaerobium		730			1		4	7				4
genus	Acetobacter	15	35		1	3		1		1			4
genus	Acetobacterium	1804	619		2	4		4	17			7	4
genus	Acetobacteroides		332
genus	Acetohalobium	45	3			1		1					3
genus	Acetomicrobium	16	52			1
genus	Acetonema		323					2	2
genus	Acholeplasma	1281	941	6		4	1	2	6			3	4
genus	Achromatium	17
genus	Achromobacter	150		1		4	9	1	1			2	4
genus	Acidaminobacter	449	464					3	6			3
genus	Acidaminococcus	1271	719	96	1	25	4	8	5	1	5	3	4
genus	Acidianus	1
genus	Acidibacter		56
genus	Acidibrevibacterium					1
genus	Acidicaldus		2
genus	Acidicapsa		74						1
genus	Acidiferrobacter		11			3
genus	Acidihalobacter					1		1					4
genus	Acidimicrobium	207				1						1
genus	Acidiphilium	43	16			1				1		1	1
genus	Acidipropionibacterium	23		1		13		3					4
genus	Acidisoma	4
genus	Acidisphaera	1				1
genus	Aciditerrimonas		203					2
genus	Acidithiobacillus		42			1		1					4
genus	Acidobacterium	1				3							3
genus	Acidocella	2	2
genus	Acidothermus		57			1
genus	Acidovorax	102	42	1		4		1	1		1	4	4
genus	Acinetobacter	405	340	16	4	28	6	4	1	8	5	4	4
genus	Acrocarpospora		4
genus	Actibacter		1
genus	Actimicrobium		7
genus	Actinoallomurus	2
genus	Actinoalloteichus		1			4							3
genus	Actinobacillus	1027	329	90		4	7	4	7			5	4
genus	Actinobaculum	138	8	17	7	1					2		2
genus	Actinocatenispora	488	152						3
genus	Actinocorallia	4	4									2
genus	Actinokineospora	5										3
genus	Actinomadura	47	47			1		1				2	4
genus	Actinomyces	1327	1106	579	29	4	10	5	10		5	7	4
genus	Actinomycetospora	10	2
genus	Actinoplanes	17	131			4		1					4
genus	Actinopolymorpha	115	2			1
genus	Actinopolyspora	393	246			1			5				3
genus	Actinorugispora		1
genus	Actinosynnema					1							2
genus	Actinotalea	2
genus	Actinotignum	29	78	29					3				3
genus	Acutalibacter								9
genus	Adhaeribacter		38
genus	Adlercreutzia	1355		537	26	25	5	8	6	1	6	6	4
genus	Advenella		8			3		1					4
genus	Aequorivita	2	9			1	2
genus	Aeribacillus		31			1			1
genus	Aeriscardovia		204
genus	Aerococcus	26	405	16		4		1	2				4
genus	Aeromicrobium	18	3	1		1						3	4
genus	Aeromonas		167	7	1	4	4	1					4
genus	Aerophilus								2
genus	Aerosphaera			48
genus	Aerosticca Watanabe et al. 2020					3
genus	Aestuariibacter		2
genus	Aestuariicola	2
genus	Aestuariispira		552				2
genus	Afifella	1
genus	Afipia	5		1		3
genus	Agaribacter		330
genus	Agarilytica					1
genus	Agarivorans		23			1
genus	Agathobacter							1			1
genus	Agathobaculum		1311	1	30		8	6	10
genus	Aggregatibacter	475	250	172	3	1	2	4	8		1	5	3
genus	Aggregicoccus		1
genus	Agreia		2
genus	Agrilactobacillus		164						3
genus	Agrobacterium	81				4		1					4
genus	Agrococcus	34	2	3		1			1				3
genus	Agromyces	311	139			1		1	2			1	4
genus	Ahniella					1
genus	Ahrensia		1
genus	Akkermansia	1572	1213	789	29	28	36	15	10	17	18	4	4
genus	Albibacterium		1
genus	Albidovulum		1	1
genus	Albimonas		9
genus	Alcaligenes		14	2		3		1					4
genus	Alcanivorax	236	11			1		1					4
genus	Algibacter	1	3			1							1
genus	Algicola		52
genus	Algimonas		17						2
genus	Algiphilus		50
genus	Algivirga		1
genus	Algorimarina		2
genus	Algoriphagus		130			3		1					1
genus	Aliarcobacter	75	4	1		4						1
genus	Alicycliphilus	11	5			1					3
genus	Alicyclobacillus	2	199			3	3	3	4				4
genus	Aliicoccus		3
genus	Aliidiomarina		23
genus	Aliifodinibius		226
genus	Aliihoeflea		1
genus	Aliivibrio					1		1					1
genus	Alishewanella	320	72								2
genus	Alistipes		1358	734	34	28	33	20	10	19	11	7	4
genus	Alkalibacillus	139	5
genus	Alkalibacter		141					2	3
genus	Alkalibacterium	610	9				1	1	1			7
genus	Alkalibaculum		301					1	2
genus	Alkalicoccus		51
genus	Alkaliflexus		55						3
genus	Alkalihalobacillus	26	38	8		4		1					4
genus	Alkalilimnicola					1							4
genus	Alkalimarinus		16
genus	Alkaliphilus	1795	387			4	4	7	16			7	4
genus	Alkalispirillum			1
genus	Alkalispirochaeta		1
genus	Alkalitalea					1							4
genus	Alkanibacter		1
genus	Alkanindiges	13	3
genus	Allisonella		268	68	2		3
genus	Alloactinosynnema					4							2
genus	Allobacillus								2
genus	Allobaculum	126	199	8	2				2
genus	Allocatelliglobosispora		2
genus	Allochromatium	85				1							1
genus	Allofrancisella		6			1
genus	Allofustis		30	2				2
genus	Allohahella	217	104					2
genus	Alloiococcus	4	111	1
genus	Allokutzneria		1			1							2
genus	Alloprevotella	13	530	83			2	5	1			1	4
genus	Alloscardovia	115	219	19	2
genus	Allosphingosinicella		15
genus	Alsobacter		2
genus	Alteracholeplasma	33	65			1		1				1
genus	Altererythrobacter		27	2		4		1					4
genus	Alteribacillus		3
genus	Alteribacter		14
genus	Alterileibacterium						2		6
genus	Alterococcus		36						1
genus	Alteromonas		32			4		1					4
genus	Altibacter		1
genus	Alysiella		4
genus	Amaricoccus	75	3									2
genus	Amedibacillus	1219	464		12			1	6	1		2
genus	Aminicella		850						1
genus	Aminiphilus	183	5									5
genus	Aminipila				1	4		1					4
genus	Aminivibrio		82
genus	Aminobacter	13	1			2		2					3
genus	Aminobacterium	76	20			1			4
genus	Aminomonas		64			4
genus	Ammonifex	640	7						1				2
genus	Ammoniphilus	68	48
genus	Amoebophilus	1650	3			1		1				5
genus	Amphibacillus		45			4							3
genus	Amphritea	46	4
genus	Amycolatopsis	27	5			4		1				1	4
genus	Amylibacter		3
genus	Amylolactobacillus								2
genus	Anabaena		2			3
genus	Anabaenopsis					1
genus	Anaerobacillus	435	2	20
genus	Anaerobacter			59
genus	Anaerobacterium		48	47			3	1	4
genus	Anaerobiospirillum	12	38		2
genus	Anaerobium		411				19	1	9
genus	Anaerobranca	1446	572					5	6			7
genus	Anaerobutyricum		1264	1	30	21	32	9	9	15			4
genus	Anaerocella		192
genus	Anaerococcus	829	770	374	1	4	5	3	9		5		4
genus	Anaerocolumna		1149			11	8	12	5				4
genus	Anaerofilum	1811	764	249	5		8	2	21			7
genus	Anaerofustis	424	915	204	9				6
genus	Anaeroglobus		731	14					6
genus	Anaerolinea	145	104	4		1		1	2
genus	Anaeromassilibacillus				8		9	1		2
genus	Anaeromusa	164	30						2
genus	Anaeromyxobacter	1	690		1	1		1					4
genus	Anaerophaga		17						1
genus	Anaeroplasma	200	205	48			1		2			2
genus	Anaerorhabdus		27
genus	Anaerosacchariphilus		1				13
genus	Anaerosalibacter		309
genus	Anaerosinus		71	34					2
genus	Anaerosphaera		156						2
genus	Anaerospora	4	238
genus	Anaerosporobacter		779	551	1		5	1
genus	Anaerostipes	1628	1390	779	35	28	36	18	21	19	12	7	4
genus	Anaerotaenia						3	1
genus	Anaerotignum		1276		7	4	21	5	10	4			4
genus	Anaerotruncus	1770	1130	731	22		29	11	11	2	7	7
genus	Anaerovibrio	1656	17	9	1			3	10			1
genus	Anaerovorax		89	276			13	1	3
genus	Anaplasma		10			1
genus	Ancylobacter	11
genus	Anderseniella		1			4
genus	Andreesenia		17
genus	Andreprevotia		1
genus	Aneurinibacillus	6	74			1		1					4
genus	Angelakisella				7		21
genus	Annandia					2
genus	Annwoodia		1
genus	Anoxybacillus	149	56	3		1		1	1		1	1	4
genus	Anoxybacter					4		1	1				4
genus	Anoxynatronum		845						3
genus	Anseongella							1
genus	Antarctobacter					1
genus	Apibacter					1		1					3
genus	Apilactobacillus		12			3
genus	Aquabacterium	10	68	5		1			1
genus	Aquamicrobium		19
genus	Aquaspirillum		40										1
genus	Aquibacter		7	1
genus	Aquicella	1	10
genus	Aquiflexum		11			1
genus	Aquihabitans		23
genus	Aquiluna		2										2
genus	Aquimarina	8	38			4		1					4
genus	Aquimonas	9	19
genus	Aquincola		9
genus	Aquipuribacter		6
genus	Aquirhabdus					1
genus	Aquisalibacillus		3
genus	Aquisalimonas		74
genus	Aquisphaera		2										3
genus	Aquitalea	17	7			4		1					4
genus	Arabia		1				1	1					4
genus	Arachidicoccus					3		1					4
genus	Arachnia	1		1	2			1					4
genus	Arcanobacterium	69	35	31			1	1				2	4
genus	Archaeoglobus		1			2		2
genus	Archangium		12			1							2
genus	Arcicella	1	121						2
genus	Arcobacter	114	21	1		4		1				1	4
genus	Arcobacter group	67	18	1		4		1				1	4
genus	Arcticibacterium					1
genus	Ardenticatena		21					2
genus	Arenibacter	4	2			3
genus	Arenimonas	7	37
genus	Arhodomonas		14
genus	Aridibacter		18
genus	Armatimonas	1	1
genus	Aromatoleum					1
genus	Arsenicicoccus		5			1
genus	Arsenophonus	36	32			1
genus	Arthrobacter	219	8	10		4	1	1	2			1	4
genus	Arthromitus					4		1					4
genus	Arthronema	9	1
genus	Arthrospira	20	6	1		1
genus	Asaccharobacter			11	1							7
genus	Asaccharospora			99				1
genus	Asaia		4			1
genus	Asinibacterium		11
genus	Aspergillus							4				1
genus	Asteroleplasma		377	73			1		3
genus	Asticcacaulis	680	71			1			2			1	1
genus	Atelocyanobacterium					1
genus	Atlantibacter					1
genus	Atopobacter		7
genus	Atopobium	611	516	98	3	1	3		4			3
genus	Atopococcus		24
genus	Atopomonas		6
genus	Atopostipes		102					2
genus	Aurantiacibacter		12			1
genus	Aurantimicrobium					1							3
genus	Aurantimonas	20
genus	Auraticoccus		3			3
genus	Aureibacter		5
genus	Aureicoccus		1
genus	Aureimonas		12			1							3
genus	Aureispira		1
genus	Aureitalea					3
genus	Auricoccus					1
genus	Auritidibacter					1							3
genus	Austwickia					1							2
genus	Avibacterium	196	87			1		2				4
genus	Azoarcus	104	4			1	1	1					4
genus	Azohydromonas	10	2
genus	Azomonas	7
genus	Azonexus		21						1
genus	Azorhizobium	6	2
genus	Azorhizophilus	3
genus	Azospira	13	6	9		1		1					4
genus	Azospirillum	365	370			4	2	1	7	3		2	4
genus	Azotobacter		4			1							4
genus	Babela					2
genus	Bacillus	7	6				1					1
genus	Bacillus	1263	606	66	1	28	27	5	17		8	6	4
genus	Bacteria		1
genus	Bacterioplanes		1			1
genus	Bacteriovorax	8	70		1								1
genus	Bacteroides	1842	1400	783	35	28	35	26	21	21	18	7	4
genus	Baia		103
genus	Balneatrix		29
genus	Balneola	69	300
genus	Bariatricus				1				3
genus	Barnesiella		1056	413	14	28	4	10	9	10	2		4
genus	Barrientosiimonas		31
genus	Bartonella	59	15			4		1					4
genus	Basfia		7			1		1
genus	Basilea		4			1
genus	Bdellovibrio	26	10			1		1	1			1	4
genus	Beduini						1	1
genus	Beggiatoa	3	1			1
genus	Beijerinckia	2				1
genus	Belliella		24			3
genus	Bellilinea	7	1
genus	Belnapia		4	1
genus	Bergeyella	27		5
genus	Bermanella		2
genus	Bernardetia		107			1
genus	Berryella Wylensek et al. 2020				3	1		1					4
genus	Beutenbergia					1
genus	Bibersteinia	4				1		1
genus	Bifidobacterium	1818	1388	790	33	28	36	18	21	16	18	6	4
genus	Bigelowiella							2	2
genus	Bilophila	1653	4	606	21	1	32	12	14	14	14	7	3
genus	Biomaibacter					1							4
genus	Biostraticola		28
genus	Bisgaardia		107					1
genus	Bittarella				8		8	2
genus	Bizionia	2	2
genus	Blastocatella			1
genus	Blastochloris	6				1							2
genus	Blastococcus	13	1	1		1
genus	Blastocystis			2
genus	Blastomonas	10				1							1
genus	Blastopirellula		17
genus	Blattabacterium					4		1					4
genus	Blautia	1842	1400	788	34	28	36	26	21	21	18	7	4
genus	Blochmannia	432				4						6
genus	Bogoriella		11
genus	Bombilactobacillus		136
genus	Bombiscardovia		19							16
genus	Bordetella		52			4		1					4
genus	Borrelia	19	2			4							3
genus	Borreliella					4		3
genus	Bosea		7	1		4		1					4
genus	Bosea	4
genus	Boseongicola		2
genus	Boudabousia		19
genus	Bounagaea								1
genus	Bowdeniella		26
genus	Bowmanella		67
genus	Brachybacterium	306	27	5		1		1	1				4
genus	Brachymonas		3
genus	Brachyspira	24		13		4		1					4
genus	Brackiella		16
genus	Bradymonas					1							1
genus	Bradyrhizobium	50	2	10		4		1				1	4
genus	Brassicibacter		969				4	3	5
genus	Brenneria	60	492			1		1				3	4
genus	Breoghania					1
genus	Brevefilum					1							1
genus	Brevibacillus	168	121			4	1	1			1		4
genus	Brevibacterium	163	137	60		28		4			1	7	4
genus	Brevifollis		27
genus	Brevinema		5						1
genus	Brevirhabdus					1
genus	Brevundimonas	40	45	7		4		1	2		3		4
genus	Breznakia								3
genus	Breznakibacter		17						2
genus	Brochothrix	1115	52			1		1	1			1	4
genus	Brockia		28
genus	Brucella	15	1	4		2			1				4
genus	Bryobacter		19
genus	Buchnera					4		1					4
genus	Bulleidia	360	77	2					2			5
genus	Burkholderia	530	40	1		4	11	1			1	5	4
genus	Buttiauxella		166			1
genus	Butyribacter				2					1	1
genus	Butyricicoccus		837	77	31		34	7	8	17	1		4
genus	Butyricimonas	1404	1102	455	14	22	29	14	13	10	15	7	4
genus	Butyrivibrio	1200	1360	417	29	28	28	12	9	1	3	7	4
genus	Bythopirellula		17
genus	Caballeronia		25			4							1
genus	Caedibacter		4
genus	Caenispirillum		25
genus	Caldalkalibacillus		181						2
genus	Caldanaerobacter	75	114	1		1			1				2
genus	Caldanaerobius		51						3
genus	Caldanaerovirga		5
genus	Caldibacillus	2				3			1				4
genus	Caldicellulosiruptor	1679	112			4	1	4	13			6	4
genus	Caldicoprobacter		48	119
genus	Caldilinea	591	9			3						7	3
genus	Caldimicrobium		2			1
genus	Caldimonas		28
genus	Caldinitratiruptor		374						7
genus	Caldisalinibacter		634						2
genus	Caldisericum		10			1
genus	Caldisphaera	1
genus	Calditerricola		4
genus	Calditerrivibrio		6			1			1
genus	Caldithrix	346	15			1			1			7
genus	Calochaete		16
genus	Caloramator	1795	943	1	2		9	9	13			7	4
genus	Caloranaerobacter							2	7				4
genus	Caloribacterium		15
genus	Calothrix	761	125			4						6
genus	Camelimonas		3
genus	Caminibacter	2	3						2
genus	Caminicella	26	857						3
genus	Campylobacter	666	502	263	3	28	7	10	6		7	7	4
genus	Candida							3					3
genus	Candida					8		3
genus	Candidatus Azobacteroides	91				4
genus	Candidatus Desulforudis							1					3
genus	Candidatus Methanoregula Brauer et al. 2006		1
genus	Candidatus Methylospira Danilova et al. 2016												1
genus	Candidatus Nitrosoglobus					1
genus	Candidatus Tenderia Eddie et al. 2016							1					4
genus	Candidatus Velamenicoccus Kizina et al. 2022					1							1
genus	Candidatus Viadribacter Braun and Szewzyk 2016					4
genus	Candidatus Walczuchella					1
genus	Candidimonas		1
genus	Canicola		90
genus	Canis								5
genus	Capnocytophaga	20	16	2		4		1	1			1	4
genus	Caproiciproducens		1			4	29	1	9				4
genus	Carboxydocella	1038	69			1		4	3			2	4
genus	Carboxydothermus		43			4
genus	Carboxylicivirga		310				1		1
genus	Cardinium					1
genus	Cardiobacterium	39	136	2				1					4
genus	Carnimonas		25
genus	Carnobacterium	80	5	8		4		1		1		2	4
genus	Carsonella					1
genus	Casaltella		901				3		6
genus	Castellaniella					1
genus	Catabacter		230	99	1				8	1		6
genus	Catellatispora	2
genus	Catellicoccus		1
genus	Catenibacterium	553	422	292	14			2	4		8	2
genus	Catenisphaera		111				1	2
genus	Catenovulum		3			1
genus	Catenulispora		8			4							2
genus	Catonella	1183	1362	1	1		16	3	6			4
genus	Caulobacter	11	16	1		4		1					4
genus	Cecembia		18
genus	Cedecea		110					3					4
genus	Celeribacter					3							4
genus	Celerinatantimonas		6
genus	Cellulomonas	44	142		4	4		1					4
genus	Cellulophaga		4			4		2
genus	Cellulosibacter		183
genus	Cellulosilyticum		1303	15		4	2	1	10				4
genus	Cellulosimicrobium	4				1					1		3
genus	Cellvibrio	25	52			3		1					3
genus	Cenarchaeum DeLong and Preston 1996	2
genus	Centipeda			6
genus	Cerasicoccus	406	246					1	3			1
genus	Cereibacter	3	9			2		1					1
genus	Cesiribacter		40
genus	Cetobacterium	99	55	4	2							1
genus	Chamaesiphon		5			3
genus	Chania		15			3
genus	Chelativorans	2	9			1
genus	Chelatococcus	4	5			1
genus	Chelonobacter	52	2									1
genus	Chiayiivirga		1
genus	Chishuiella		6
genus	Chitinilyticum		3
genus	Chitinimonas		24						1
genus	Chitinispirillum		19						2
genus	Chitinivibrio		2
genus	Chitinivorax		15
genus	Chitinolyticbacter		1										1
genus	Chitinophaga	70	34		3	4		1					4
genus	Chlamydia	1	2			1		1					2
genus	Chloracidobacterium		17			3
genus	Chlorobaculum	1505	7			4		1	11			2	4
genus	Chlorobium		4			1		1					4
genus	Chloroflexus		3			1
genus	Chlorogloeopsis		17
genus	Chloroherpeton	9	28
genus	Chondrocystis					1
genus	Chondromyces	69	1						1				1
genus	Christensenella		348	180	28	4	16	3	10	1	2	7	4
genus	Chromatium	358	7
genus	Chromobacterium	161	19			12		4				1	4
genus	Chromocurvus Csotonyi et al. 2011		1
genus	Chromohalobacter	1	3			1
genus	Chroococcidiopsis	1				1		1					4
genus	Chroococcus	743	2									2
genus	Chryseobacterium	143	43	2		4		1			1	6	4
genus	Chryseoglobus												2
genus	Chryseolinea		41			4							3
genus	Chryseomicrobium		32						2
genus	Chthoniobacter	31	12
genus	Chthonomonas	6	166			3
genus	Citreitalea		1
genus	Citricoccus	5	1										2
genus	Citrifermentans	2	10					2
genus	Citrobacter	340	16	55	9	27	17	8	17		4	3	4
genus	Citromicrobium					3
genus	Clavibacter			1		4							3
genus	Cloacibacillus	150	165	106	3	1		2	1		1		4
genus	Cloacibacterium		17	2		3		1			1
genus	Cloacimonas					1
genus	Clostridiisalibacter		16
genus	Clostridioides		133	488	33	20	3	15	5			6	4
genus	Clostridium	1841	1393	778	34	28	35	26	21	1	17	7	4
genus	Cnuella		3
genus	Cobetia		1			1							4
genus	Cocleimonas		2
genus	Coenonia		11
genus	Cognaticolwellia Liu et al. 2020					1
genus	Cohaesibacter		1			1
genus	Cohnella	572	69			4		3	3			7	4
genus	Coleofasciculus		1
genus	Colidextribacter		1				23		9
genus	Collimonas	10	36			4		1					4
genus	Collinsella	1491	1193	771	23	28	32	9	14		14	7	4
genus	Colwellia	2	51			4		1					3
genus	Comamonas	171	46	22		3		1			8	1	4
genus	Commensalibacter		3
genus	Companilactobacillus	222	175	1		4	1	1					4
genus	Conchiformibius	7	5
genus	Conexibacter	7	8
genus	Confluentimicrobium					1
genus	Congregibacter		5
genus	Constrictibacter		2						1
genus	Contubernalis	256										5
genus	Coprobacillus	1788	693	155	27	2	5	6	12		3	7	2
genus	Coprobacter		767	337	9		9	2	5		1
genus	Coprococcus	1838	1399	2	34	24	31	21	21	2	17	7	4
genus	Coprophilus								2
genus	Coprothermobacter	16	83	7
genus	Coraliomargarita	497	103			1
genus	Corallibacter		1
genus	Corallococcus					4							4
genus	Coriobacterium	141	73			3	2	1					4
genus	Corticibacter		4
genus	Corynebacterium	935	774	444	13	28	8	5	12		7	1	4
genus	Couchioplanes	1	18
genus	Coxiella		29			1
genus	Crassaminicella							1					4
genus	Craurococcus			2
genus	Crenothrix	4
genus	Criblamydia		44
genus	Crinalium		1			1
genus	Croceibacter		9			1
genus	Croceibacterium					1
genus	Croceicoccus					1							1
genus	Cronobacter		90	83		6		4	1				4
genus	Cruoricaptor		67	1
genus	Cryobacterium	1	3	11		1							4
genus	Cryomorpha		117
genus	Cryptanaerobacter		10
genus	Cryptobacterium		515	1		1		1	3				3
genus	Cryptococcus										13
genus	Cryptosporangium	1
genus	Cryptosporidium							3
genus	Cucumibacter		2
genus	Culturomica								8
genus	Cuneatibacter								10
genus	Cupidesulfovibrio	2	17
genus	Cupriavidus	13	73	1		4		1	1				4
genus	Curtobacterium	18		1		1		1					4
genus	Curvibacter	46	7	6				1	1			2	2
genus	Cutibacterium	7	12	29		2		1				1	4
genus	Cyanobacterium	298	42									1	1
genus	Cyanobium		4	1		1		1					4
genus	Cyanothece					1
genus	Cyclobacterium		67			4
genus	Cycloclasticus	24	22			1		1					3
genus	Cyclonatronum					3
genus	Cylindrospermum		1
genus	Cystobacter	76	49			1
genus	Cytobacillus	136			1	4		1					4
genus	Cytophaga		64			1			2				2
genus	Dactylococcopsis					3
genus	Dactylosporangium	35	8
genus	Dasania		34
genus	Dechloromonas	159	9					1					4
genus	Deefgea	3	8
genus	Deferribacter	211	45			4						4
genus	Deferrisoma		33						1
genus	Defluviicoccus		11						1
genus	Defluviimonas		3	1
genus	Defluviitalea		331	2				3	3
genus	Defluviitoga		20			1
genus	Dehalobacter	3	293			4	3	1					4
genus	Dehalobacterium	745	2	9		1		2	3		7	3	4
genus	Dehalococcoides	3	70		1	1		1	1				4
genus	Dehalogenimonas	102	180			4			1				2
genus	Deinococcus	867	201	6		4	1	1	3			4	4
genus	Delftia	25	19	64		3							4
genus	Dellaglioa		129	11
genus	Demequina	19	81						1
genus	Dendrosporobacter		71
genus	Denitratisoma	209	15	1									4
genus	Denitrobacter	6
genus	Denitrobacterium		4	1		1	6	1					4
genus	Denitrovibrio					3
genus	Dependoparvovirus								2
genus	Dermabacter	69	78	52		1				1			3
genus	Dermacoccus	15	1		1	1					1		3
genus	Dermatophylus	2											2
genus	Derxia		51
genus	Desemzia	2	310
genus	Desertibacter		5
genus	Deserticella		19
genus	Desmospora		9
genus	Desulfacinum	91	2
genus	Desulfallas		53			1		3					4
genus	Desulfarculus		163			1							4
genus	Desulfatibacillum		5			10		3					2
genus	Desulfatiferula		32
genus	Desulfatiglans		18
genus	Desulfatirhabdium		2
genus	Desulfatitalea		8
genus	Desulfitibacter	3	145	1				2	1
genus	Desulfitispora		56						2
genus	Desulfitobacterium	317	137	1		28		6				3	4
genus	Desulfobacca	2	28			1			1
genus	Desulfobacter	108	14			6		5				2
genus	Desulfobacterium	1	347			1		1	1				4
genus	Desulfobacula		1			7		5
genus	Desulfobaculum		19
genus	Desulfobotulus		8
genus	Desulfobulbus	12	154			11		6					4
genus	Desulfocapsa	10	2			3		5
genus	Desulfocarbo		150
genus	Desulfocella		368	1				2	6
genus	Desulfococcus	9	3			12		6					4
genus	Desulfoconvexum		1
genus	Desulfocurvibacter		1					1					3
genus	Desulfocurvus		5
genus	Desulfofaba	14	61
genus	Desulfofarcimen	50	302			4		1					2
genus	Desulfofrigus	213	51
genus	Desulfofundulus	305	127					1					4
genus	Desulfofustis		12
genus	Desulfoglaeba		310
genus	Desulfohalobium		3			3							2
genus	Desulfohalophilus		1
genus	Desulfohalotomaculum	189	985					1	1
genus	Desulfohalovibrio	3	94
genus	Desulfomicrobium	103	317			20		6	7				4
genus	Desulfomonile	237	15			1						1
genus	Desulfonatronobacter		7
genus	Desulfonatronovibrio	243	14									2
genus	Desulfonatronum	321	48									2
genus	Desulfonauticus	95	40									7
genus	Desulfonema		41						2
genus	Desulfonispora		118
genus	Desulfopila		2					1					4
genus	Desulfoplanes		45
genus	Desulforegula		83					2
genus	Desulforhabdus		1
genus	Desulforhopalus	4
genus	Desulfosalsimonas		4
genus	Desulfosarcina	112	22					1					4
genus	Desulfoscipio Watanabe et al. 2020		18			1		1					4
genus	Desulfosoma		181					2
genus	Desulfosporosinus	832	300	1		16	1	6	6			7	4
genus	Desulfotalea	5	1			4		5
genus	Desulfothermus		16
genus	Desulfotignum	3
genus	Desulfotomaculum	1012	1152	2	4	17	9	7	9			7	4
genus	Desulfovibrio	1513	1213	382	7	28	20	17	14	7	10	7	4
genus	Desulfovirga		36
genus	Desulfurella	6	6			11		2
genus	Desulfuribacillus		9					1
genus	Desulfurispira		3
genus	Desulfurispirillum	309	1			1		1					1
genus	Desulfurispora	994	788					2	2			2
genus	Desulfurivibrio		5			3		2					2
genus	Desulfurobacterium		9			1
genus	Desulfurococcus	1
genus	Desulfuromonas	84	67			15		6					4
genus	Desulfuromusa	885	4					1	9			5
genus	Dethiobacter	52	9	1				2	3			1
genus	Dethiosulfatibacter		465						2
genus	Dethiosulfovibrio	1001	148					1	6			6
genus	Devosia	612	82			4			2		1		4
genus	Devriesea					1							3
genus	Dialister	1205	1239	475	13	4	10	11	9	4	14	5	4
genus	Diaminobutyricimonas												2
genus	Diaphorobacter	7	9					1	1				4
genus	Dichelobacter	1				1
genus	Dichotomicrobium		12
genus	Dickeya	32	81			4	1	1					4
genus	Dictyoglomus		105		2	1							2
genus	Dielma		730	309	15		9	1	7
genus	Dientamoeba			1
genus	Dietzia	101	186	1		1							4
genus	Dinoroseobacter					1
genus	Diplorickettsia		13
genus	Discophora								6
genus	Dispar								9
genus	Dissulfuribacter		10
genus	Dokdonella	708	49			1			1			1
genus	Dokdonia		26			4
genus	Dolichospermum	1216	2			1			4			7
genus	Dolosicoccus		11						1
genus	Dolosigranulum		305						1				4
genus	Dongia		193						3
genus	Dorea	1819	1385	779	35		35	17	20	17	18	7	4
genus	Draconibacterium		34			1							4
genus	Drancourtella				3				10	3
genus	Duganella		3						1				3
genus	Duncaniella					4		1					4
genus	Duodenibacillus						7		2	1
genus	Dyadobacter	479	83			4		1				4	3
genus	Dyella	8	8			1			1				4
genus	Dysgonomonas	1465	873	10			4	9	7		2	7	4
genus	Dysosmobacter				9	18		4					4
genus	Echinicola		57			4		1					4
genus	Ectobacillus		30						2
genus	Ectothiorhodosinus		4
genus	Ectothiorhodospira	301	45			1							1
genus	Edaphobacter	209										1	2
genus	Edwardsiella	92	31			3		3					4
genus	Edwardsiella	36				1
genus	Effusibacillus		298						5
genus	Eggerthella	1387	1186	575	34	28	24	14	11	8	8	6	4
genus	Eggerthia		535	1					1
genus	Egibacter					1
genus	Egicoccus					1
genus	Ehrlichia	491	13			1		1	1			2
genus	Eikenella	19	7	5		1		1				2	4
genus	Eilatimonas		2
genus	Eionea		1
genus	Eisenbergiella		1084	519	3		24	7	10	8		6
genus	Eisenibacter		188
genus	Ekhidna		1
genus	Elioraea		3
genus	Elizabethkingia	5	22			4		1					4
genus	Elstera		4
genus	Elusimicrobium	8	72	7		1			1
genus	Emcibacter		209										2
genus	Emergencia				2				10	1
genus	Empedobacter		8			1							3
genus	Emticicia	1259	174				2	1	2			5	3
genus	Endobacter		1
genus	Endobugula	111
genus	Endolissoclinum					1
genus	Endomicrobium					1							2
genus	Endozoicomonas		5			1							2
genus	Enhydrobacter	38
genus	Enorma		175	68	2		3	1	1
genus	Ensifer		5			1		1					4
genus	Enterobacter	796	67	208	6	28	9	9	12	2	15	7	4
genus	Enterocloster		1239	2	31	25	33	13	10	6			4
genus	Enterococcus	1499	284	138	29	28	27	13	15	6	9	4	4
genus	Enterorhabdus		536	263	12		7		1	8
genus	Enteroscipio				2
genus	Enterovibrio					1
genus	Entomomonas					1
genus	Entomoplasma	10	31			4			2
genus	Epibacterium					1
genus	Epidermidibacterium												2
genus	Epilithonimonas	11	3			1
genus	Epulopiscium			59			3				1
genus	Ercella		379
genus	Ereboglobus					3							4
genus	Eremococcus		37	21					1
genus	Eremococcus		1	11
genus	Erwinia	438	237	1		4	1	2	1		11	2	4
genus	Erysipelatoclostridium		1388	756	31	22	35	9	10	14		7	4
genus	Erysipelothrix	1546	844			3	3	9	6			7	4
genus	Erythrobacter	130	18			1		1			1		4
genus	Erythromicrobium	13
genus	Escherichia	1484	71	1	26	28	11	14	10	12	1	6	4
genus	Ethanoligenens	881	1131			4		4	13				4
genus	Eubacterium	1737	1400	151	35	25	36	12	12	17	13	7	4
genus	Eudoraea		56
genus	Euryhalocaulis		8
genus	Euzebya	1092	96			1		1	1
genus	Euzebyella					1
genus	Evansella					1
genus	Evtepia				12			5
genus	Exiguobacterium	31	48			4		1				3	4
genus	Exophiala							1
genus	Extensimonas		1
genus	Extibacter								7
genus	Ezakiella		387			1		3	3				4
genus	Fabibacter		6
genus	Facklamia	164	1065	50				2	7		1		3
genus	Faecalibacterium	1842	1394	771	35	28	35	18	11	6	18	7	4
genus	Faecalibaculum					1		1					4
genus	Faecalicatena		861				21	2
genus	Faecalicoccus		816		1		3	3	5
genus	Faecalimonas				2
genus	Faecalitalea	189	168		20	4	18	5					4
genus	Falcatimonas		1				14	1
genus	Fallax								1
genus	Falsiporphyromonas		325					2
genus	Falsirhodobacter		1
genus	Fangia		12
genus	Fannyhessea		231	2
genus	Fastidiosipila		157	74		3	1	1					4
genus	Fenollaria		711		2		4		6
genus	Fermentimonas					4		1					4
genus	Ferrimicrobium	21	2									1
genus	Ferrimonas	18	48			1							3
genus	Ferriphaselus												2
genus	Ferrithrix		242
genus	Ferrovibrio		2
genus	Ferrovum		5
genus	Ferruginibacter		99
genus	Fervidicella		13						1
genus	Fervidobacterium	21				4						1
genus	Fibrella		2			3		1					4
genus	Fibrobacter	139	283	85		1		2					4
genus	Fictibacillus		48			4		1					4
genus	Filifactor	531	472			13	18	4	1				4
genus	Filimonas					4
genus	Filomicrobium		2
genus	Fimbriimonas	2	75			1
genus	Finegoldia	929	979	443	3	26	5	5	9		4	1	4
genus	Fischerella					1
genus	Flagellimonas		1			1
genus	Flammeovirga	412	33			4		1	1				3
genus	Flaviaesturariibacter		1
genus	Flavicella		4
genus	Flaviflexus		26			3		1					4
genus	Flavihumibacter		3
genus	Flavilitoribacter		8
genus	Flavisolibacter	46	1	1		4		1	1				4
genus	Flavitalea		9
genus	Flavivirga					1
genus	Flavobacterium	102	42	395		4		5				7	4
genus	Flavonifractor		1359	767	34	22	31	12	10	1		7	4
genus	Flectobacillus	1	86
genus	Flexibacter		8	1			2
genus	Flexispira Bryner 1987	4
genus	Flexistipes		96			1
genus	Flexithrix		12
genus	Flintibacter				1		25	2	9				4
genus	Fluoribacter					1
genus	Fluviicola	2	17			1	3	1					3
genus	Fluviimonas		562						1
genus	Fluviispira					3
genus	Fodinibius		5					2
genus	Fodinicola		1
genus	Fodinicurvata		475				1		8
genus	Fontibacillus		4
genus	Fontibacter		39
genus	Fonticella		168	2
genus	Formosa	2				4							3
genus	Fournierella		1		6		16	1
genus	Francisella	79	70	2		4		2				1	4
genus	Franconibacter		12
genus	Frankia	3				4		1					4
genus	Frateuria		3			1
genus	Frederiksenia		4					1
genus	Fretibacter		15
genus	Fretibacterium		9	98		2		1					4
genus	Friedmanniella	30	40			1						1	2
genus	Frigoribacterium	2
genus	Frischella		2			3		1
genus	Frisingicoccus								8
genus	Frondihabitans					1							3
genus	Fructilactobacillus	86	112	1		1		1					2
genus	Fructobacillus	87	39
genus	Fuchsiella		34						1
genus	Fucophilus		2
genus	Fulvibacter		1
genus	Fulvimarina		1
genus	Fulvitalea		80
genus	Fulvivirga	10	100
genus	Furfurilactobacillus	749	44					1				1
genus	Fusarium							3
genus	Fuscovulum Suresh et al. 2019					3			1
genus	Fusibacter	108	286					3	6			6
genus	Fusicatenibacter		1366	761			17	4		16	1
genus	Fusobacterium	800	612	121	4	28	5	9	4	1	2	6	4
genus	Gabonia Mourembou et al. 2015									2
genus	Gabonibacter						10	1	2
genus	Gaetbulibacter			1
genus	Gaiella		53					2
genus	Galenea		48					2
genus	Gallaecimonas		4
genus	Gallibacterium	31	71	1		1		1				1	1
genus	Gallicola		79	70							1
genus	Gallionella	229	23			1					2
genus	Garciella		22					2
genus	Gardnerella	92	183	40	1	1	1		2				4
genus	Garicola		2
genus	Garritya		2
genus	Geitlerinema												1
genus	Gelria		9	211				2
genus	Gemella	1687	794	154	16	4	3	5	7			6	4
genus	Geminicoccus		91						2
genus	Geminisphaera		10
genus	Geminocystis					1
genus	Gemmata	11	12	1		1							1
genus	Gemmatimonas	12	24			1							4
genus	Gemmatirosa		8			1							4
genus	Gemmiger		1260		12		16	7	9
genus	Gemmobacter		2			4			1
genus	Geoalkalibacter		13			1							4
genus	Geobacillus	557	82	7		1	11	1	3		1	3	4
genus	Geobacter	108	57			4		5				1	4
genus	Geodermatophilus	7	18			2			1				1
genus	Geofilum		146
genus	Geomicrobium		27
genus	Geopsychrobacter		6
genus	Georgenia	20	37										3
genus	Georhizobium					1
genus	Geosporobacter					4		2					4
genus	Geothermobacter		2
genus	Geothermomicrobium								2
genus	Geothrix	900	610					2	3
genus	Geotoga		1
genus	Geovibrio	15	1			3							3
genus	Gibbsiella					4
genus	Giesbergeria	21	1
genus	Gilliamella					1
genus	Gillisia	1115	42			1						1
genus	Gilvimarinus		1
genus	Gimesia		4
genus	Glaciecola	257	78			3							2
genus	Glaciimonas		2
genus	Glaesserella		4			1		1					1
genus	Gleimia	63	53	1
genus	Globicatella		22	2					1
genus	Gloeobacter		12			1		1	1				4
genus	Gloeothece	1	1
genus	Gloeotrichia	3
genus	Glomeribacter	711	2						1			3
genus	Gluconacetobacter	7	8			1
genus	Gluconobacter	154	3			1		1					4
genus	Glutamicibacter	152	68									1	4
genus	Glycocaulis		1			1
genus	Glycomyces	90	26						1			1
genus	Gorbachella		1				1	1
genus	Gordonia	74	133	1		4		1					4
genus	Gordonibacter		854	457	25	1	24	2	7	3			4
genus	Gottschalkia		210			22		7	3				4
genus	Gracilibacillus		249						1
genus	Gracilibacter		608	3			2	3	6
genus	Gracilimonas		373					2	3
genus	Gramella	63	2			4		1				6	4
genus	Granulibacter					4							3
genus	Granulicatella	823	170	321	13			2	10		3	5	2
genus	Granulicella	106	21					1					4
genus	Granulosicoccus		87			1
genus	Gryllotalpicola		10			1							2
genus	Gudongella					1		1					4
genus	Guggenheimella		492					2	6
genus	Guizotia								11
genus	Gulbenkiania		13
genus	Gullanella					2
genus	Gulosibacter	82	11	29					1				2
genus	Guyparkeria	27	1										1
genus	Gynuella		48			1
genus	Haematobacter					3
genus	Haematospirillum					2
genus	Haemophilus	1370	1008	528	19	6	21	8	5	7	17	6	4
genus	Hafnia			14	2	10	2	7
genus	Hahella	219	240			3			1
genus	Halanaerobacter	16	5									4
genus	Halanaerobaculum		6
genus	Halanaerobium	396	14			4		1	4			2	4
genus	Halarcobacter		9			2		1
genus	Halarsenatibacter		96
genus	Haliangium	151	34			3							4
genus	Haliea		7
genus	Halioglobus		1			1							4
genus	Haliscomenobacter	1	108			3
genus	Haloactinopolyspora		2
genus	Halobacillus		31			4		1					4
genus	Halobacter												2
genus	Halobacteriovorax	7	36			4		1					4
genus	Halobacteroides		8			1
genus	Halobaculum	2
genus	Halocella		13			4		1					3
genus	Halochromatium	101	237					2
genus	Halodesulfovibrio		6
genus	Haloechinothrix		4
genus	Haloferax	1
genus	Haloferula		46					2
genus	Haloglycomyces		1
genus	Halolactibacillus		41
genus	Halomicroarcula		1
genus	Halomicronema		2			3
genus	Halomonas	182	528		1	4	1	3	1			3	4
genus	Halonatronum		5
genus	Haloplasma		37	1					2
genus	Halopolyspora		184					2
genus	Halopseudomonas		8
genus	Halorhodospira	48	116			1			1			2	1
genus	Halospina		8
genus	Halospirulina		1
genus	Halotalea					1
genus	Halothermothrix		204			1		2	5
genus	Halothiobacillus	37	54					2					3
genus	Haploplasma	77	31			3		1	2			2
genus	Harryflintia				4			1
genus	Hartmannibacter					1
genus	Hathewaya	1807	817			17		7	3			7	4
genus	Hazenella		26
genus	Helcococcus	107	233	19									3
genus	Helicobacter	518	44	3		28		9	2			1	4
genus	Heliimonas		11
genus	Heliobacterium	2	24			1		1	3	3			4
genus	Heliomicrobium		1			1		1					4
genus	Heliomonas						1	1
genus	Heliophilum		39						2
genus	Heliorestis	653	11						5			5	3
genus	Heliothrix		1
genus	Hellea		9
genus	Henriciella		546						4
genus	Hepatoplasma					1
genus	Hephaestia		2
genus	Herbaspirillum	676	75	250		4	13	2	3			3	4
genus	Herbiconiux												2
genus	Herbinix		507			4	6	2	6				4
genus	Herminiimonas	54	195			4			2				3
genus	Herpetosiphon	1	6
genus	Hespellia		1353	500			15	1	10
genus	Heyndrickxia	1	2
genus	Hippea		7			1
genus	Hirschia		15
genus	Histophilus		22			1		1					1
genus	Hoeflea					1
genus	Holdemanella	895	687		19		2	4	5			6
genus	Holdemania	1567	1166	566	28		23	6	20		9	7
genus	Holophaga		13						2
genus	Holospora				1
genus	Holzapfelia		77
genus	Homo							1
genus	Hoppeia		1
genus	Howardella		997	123			2	2	2
genus	Hoyosella		50										2
genus	Hugenholtzia		38					2
genus	Humibacter		29										3
genus	Hungateiclostridium	590	561	2		4	4	1	7			6
genus	Hungatella		1321		33	15	32	8	10	7		7	4
genus	Hwangdonia		21
genus	Hydrocarboniphaga	1353	2						9
genus	Hydrocoleum	19	1
genus	Hydrogenibacillus		126				4	2	4
genus	Hydrogenispora		638
genus	Hydrogenoanaerobacterium		1127	224				2
genus	Hydrogenobacter		13			3			1
genus	Hydrogenobaculum	11	2			1		2	4
genus	Hydrogenophaga	56	12	1		1		1	1				4
genus	Hydrogenophilus	769	241	3				1	3				1
genus	Hydrogenothermus		23
genus	Hydrogenovibrio	33	27			1
genus	Hydrotalea		23
genus	Hylemonella	5
genus	Hymenobacter	1094	63	1		4		1	4				4
genus	Hyphomicrobium	220	26			4		1				4	4
genus	Hyphomonas	97	17			2						3	3
genus	Iamia		5
genus	Ianmoorea					3
genus	Ichthyobacterium					1
genus	Ideonella		2
genus	Idiomarina	70	21			1		1					4
genus	Ignatzschineria	1	6
genus	Ignavibacterium	38	51			1							2
genus	Ignavigranum		118	2
genus	Ihubacter						28		9
genus	Ileibacterium						3
genus	Ilumatobacter		162
genus	Ilyobacter					4							2
genus