Bacteria reported by various 16s providers

Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

clade

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Bilateria 13 8 1 70
Eumetazoa 13 8 1 74

class

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Protostomia 13 8 1 68
Acidimicrobiia 5 155 42
Acidithiobacillia 23 1
Acidobacteria 128 263 61
Acidobacteria subdivision 23 40
Acidobacteria subdivision 6 1
Acidobacteriia 853 496 38 321
Aconoidasida 1
Actinopteri 1
Agaricomycetes 1
Alphaproteobacteria 484 475 34 316
Amphibia 1 3
Anaerolineae 12 88 147
Anthozoa 1 8
Aquificae 21 7
Arachnida 1
Archaeoglobea 1
Ardenticatenia 10 1
Armatimonadia 1
Arthoniomycetes 1
Aves 1
Babeliae 3
Bacilli 854 498 39 348
Bacteroidia 856 498 39 350
Balneolia 273 7 31
Betaproteobacteria 811 495 39 348
Bivalvia 1
Blastocatellia 3 76 3
Brocadiae 8
Bryopsida 1
Caldilineae 1 135 118
Caldisericia 1 2
candidate division Termite Group 3 2
Cestoda 1
Chitinispirillia 7
Chitinophagia 9 383 164
Chlamydiia 61 37
Chlorobia 1 34 270
Chloroflexia 3 41 14 1
Chlorophyceae 1
Chromadorea 1
Chrysiogenetes 12 82
Chthonomonadetes 35 3
Clitellata 1
Clostridia 857 498 39 350
Coprothermobacteria 7 25 4
Coriobacteriia 843 496 39 322
Cytophagia 10 415 13 284
Dacrymycetes 1
Deferribacteres 1 54 103
Dehalococcoidia 1 106 63
Deinococci 11 112 13 222
Deltaproteobacteria 688 477 36 338
Diaporthales 1
Dictyoglomia 36 1
Dothideomycetes 1
Echinoidea 1
Ellioviricetes 1
Elusimicrobia 7 52 20 6
Endomicrobia 1
Enopla 1
Epsilonproteobacteria 299 248 10 192
Erysipelotrichia 837 497 39 345
Eurotiomycetes 1
Fibrobacteria 205 100 39
Fimbriimonadia 18 2
Flavobacteriia 506 306 13 280
Florideophyceae 10
Fusobacteria 170 278 8 180
Gammaproteobacteria 786 498 39 347
Gastropoda 1 25
Gemmatimonadetes 2 34 16 3
Gloeobacteria 8 1
Halobacteria 1
Hemiascomycetes 1
Heterobasidiomycetes 1 13
Hexanauplia 1
Holophagae 231 137
Hydrogenophilalia 6 106 132
Ignavibacteria 2 340 16 36
Insecta 13 8 1 49
Insthoviricetes 1
Ktedonobacteria 6 20
Lecanoromycetes 1
Lentisphaeria 302 171 8 7
Liliopsida 1
Limnochordia 2 1
Malasseziomycetes 2
Mammalia 1
Mandibulata 13 8 1 49
Merostomata 1
Methanobacteria 232 134 19 109
Methanomicrobia 20 2 2
Methylacidiphilae 6
Microbotryomycetes 1
Mollicutes 181 426 28 314
Negativicutes 858 497 37 322
Nitriliruptoria 23 169
Nitrososphaeria 1 1
Nitrospinia 2
Nitrospira 2 25 52
Oligoflexia 2 39 11
Oligosphaeria 1 17
Opitutae 108 209 1 199
Pedosphaera 1
Pentapetalae 21 11 2 99
Pezizomycetes 1
Phaeophyceae 1
Phycisphaerae 2 4
Pilidiophora 1
Planctomycetia 3 51 10
Polychaeta 1
Polyplacophora 1
Polypodiopsida 1
Protoarchaea 2
Rhabditophora 1
Rhodothermia 4
Rhynchonellata 1
Rubrobacteria 2 46 6
Saprospiria 85 26
Solibacteres 1 7
Spartobacteria 27 17
Sphingobacteriia 22 305 28 324
Spirochaetia 28 75 159
Synergistia 251 194 1 237
Taphrinomycetes 1
Thermodesulfobacteria 14 49
Thermoleophilia 2 44 8
Thermolithobacteria 21
Thermomicrobia 1 7 1
Thermoplasmata 46 22
Thermoprotei 1 8
Thermotogae 12 31
Tissierellia 561 478 17 331
Trematoda 1
unclassified alpha proteobacteria 3 3
unclassified epsilon proteobacteria 5 3
Ustilaginomycetes 1
Verrucomicrobiae 523 438 28 294

cohort

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zetaproteobacteria 1 13 1
Endopterygota 1 3
Euteleosteomorpha 1
hemipteroid assemblage 13 4 41
Orthopteroidea 8 1 8

family

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Otomorpha 1
Acanthopleuribacteraceae 25
Acaryochloridaceae 2
Acetobacteraceae 7 143 1 113
Acholeplasmataceae 18 318 17 299
Acidaminococcaceae 600 448 23 298
Acidiferrobacteraceae 8 4
Acidimicrobiaceae 150 42
Acidithiobacillaceae 23 1
Acidobacteriaceae 99 86 61
Acidothermaceae 27 1
Actinomycetaceae 693 448 27 277
Actinopolysporaceae 73 83
Adenoviridae 1
Adoxaceae 1
Aerococcaceae 94 397 162
Aeromonadaceae 11 118 5 101
Agathiphagidae 1
Akkermansiaceae 520 430 28 269
Alcaligenaceae 12 96 10 318
Alcanivoracaceae 13 47
Alcidae 1
Algiphilaceae 17
Alicyclobacillaceae 172 8 5
Alteromonadaceae 233 113
Amanitaceae 1
Amaryllidaceae 1
Ambystomatidae 1
Ammodytidae 1
Amoebophilaceae 274
Anaerolineaceae 10 87 50
Anaeromyxobacteraceae 289 2
Anaeroplasmataceae 128 193 3 25
anamorphic Clavicipitaceae 1
anamorphic Mycosphaerellaceae 1
anamorphic Ustilaginaceae 1
Anaplasmataceae 22 107
Aphanizomenonaceae 1 209
Aphanothecaceae 2 1
Apiaceae 1
Aplysiidae 1
Aquificaceae 4 6
Araceae 1
Archaeoglobaceae 1
Archangiaceae 35 9
Ardenticatenaceae 10 1
Armatimonadaceae 1
Arthoniaceae 1
Ascarididae 1
Aspergillaceae 1
Asteraceae 1
Atopobiaceae 185 304 12 118
Aurantimonadaceae 1 4 4
Azonexaceae 7 43
Babeliaceae 3
Bacillaceae 257 384 34 307
Bacillales Family X. Incertae Sedis 1 244 315
Bacillidae 5 1 8
Bacteriovoracaceae 2 17 5
Bacteroidaceae 838 497 38 350
Baicaliidae 1
Balneatrichaceae 7
Balneolaceae 269 1 32
bandicoots 1
bark crevice scale insects 13 2
Barnesiellaceae 547 445 13 25
Bartonellaceae 3 21
Bathydraconidae 1
Bdellovibrionaceae 1 4
Beijerinckiaceae 1 6 17
Bernardetiaceae 57 1
Beutenbergiaceae 1 1
Bifidobacteriaceae 672 491 28 338
Bionectriaceae 1
Blastocatellaceae 3 16
Blastocystidae 2
Blattabacteriaceae 4
Bogoriellaceae 19 4
Borreliaceae 3 15
Bovidae 1
Brachycladiidae 1
Brachyspiraceae 14 26
Braconidae 1
Bradymonadaceae 1
Bradyrhizobiaceae 17 33 22
Brassicaceae 1
Brevibacteriaceae 71 53 31
Brevinemataceae 2
Brucellaceae 29 27 4 34
Bryobacteraceae 8
Budviciaceae 150 4
Burkholderiaceae 42 143 18 282
Burseraceae 1
Cabombaceae 1
Caedimonadaceae 1
Calanidae 1
Caldicoprobacteraceae 254 7
Caldilineaceae 1 133 124
Caldisericaceae 1 1
Calditrichaceae 1 71
Caliciviridae 1
Campanulaceae 1
Campylobacteraceae 298 210 7 146
Candidatus Brocadiaceae 8
Candidatus Desulfofervidaceae 1
Candidatus Midichloriaceae 1 1
Candidatus Nanopelagicaceae 1 3
Candidatus Paracaedibacteraceae 1
Carabidae 1
Cardiobacteriaceae 10 82 9
Carnobacteriaceae 369 255 5 219
Caryophyllaceae 1
Catabacteriaceae 107 89 1 1
Catalimonadaceae 31
Catenulisporaceae 1 4
Caulobacteraceae 17 62 150
Cebidae 1
Celerinatantimonadaceae 6
Cellulomonadaceae 32 23
Cellvibrionaceae 34 5
Centrarchidae 1
Cercopithecidae 1
Cervidae 1
Chamaesiphonaceae 4 3
Chaoboridae 1
Chelatococcaceae 2 2 1
Chelidae 1
Chenopodiaceae 1
Chitinispirillaceae 7
Chitinivibrionaceae 2
Chitinophagaceae 9 383 176
Chlamydiaceae 1 2
Chlamydomonadaceae 1
Chlorobiaceae 34 270
Chlorococcaceae 1
Chloroflexaceae 2 1
Chlorogloeopsidaceae 7
Chordaceae 1
Chordariaceae 1
Christensenellaceae 138 72 25 25
Chromatiaceae 5 263 1 276
Chromobacteriaceae 57 37
Chroococcaceae 117
Chroococcidiopsidaceae 2 1
Chrysiogenaceae 12 86
Chrysomelidae 1
Chrysopidae 1
Chthoniobacteraceae 4 17
Chthonomonadaceae 35 3
Cichlidae 1
Clostridiaceae 842 497 39 345
Clostridiales Family XI. Incertae Sedis 232
Clostridiales Family XII. Incertae Sedis 18 279 98
Clostridiales Family XIII. Incertae Sedis 708 461 33 265
Clostridiales Family XVI. Incertae Sedis 14 191
Clostridiales Family XVII. Incertae Sedis 37 18
Clostridiales incertae sedis 747 470 33 286
Coccidae 32
Cochlospermaceae 1
Coelosphaeriaceae 8
Cohaesibacteraceae 1 1
Colchicaceae 1
Coleofasciculaceae 4
Colwelliaceae 97 4
Comamonadaceae 130 85 3 285
Competibacteraceae 83
Conexibacteraceae 1 6 2
Coprothermobacteraceae 7 25 4
Corbulidae 1
Coriobacteriaceae 829 446 36 343
Cortinariaceae 1
Corynebacteriaceae 498 296 10 185
Cottidae 1
Coxiellaceae 2 25 10
Criblamydiaceae 24
Cricetidae 1
Crocinitomicaceae 23 3 1
crown conchs 1
Cryomorphaceae 1 55 1
Cryptococcaceae 13
Cryptomonadaceae 1
Culicidae 1
Cuniculitremaceae 1
Curculionidae 1
Cyanobacteriaceae 22 49
Cyanothecaceae 1
Cyclobacteriaceae 132 4
Cyprinidae 1
Cytophagaceae 6 344 4 295
Dacrymycetaceae 1
Dactylopteridae 1
Dasypodidae 1
Deferribacteraceae 1 54 113
Defluviitaleaceae 20 122 3
Dehalococcoidaceae 20 59
Deinococcaceae 10 55 1 167
Delphinidae 1
Demequinaceae 25 1
Dendrocolaptidae 1
Dermabacteraceae 70 41 58
Dermacoccaceae 7 12 6
Dermatophilaceae 1 5 1
Dermocarpellaceae 1
Desulfarculaceae 125 1
Desulfobacteraceae 2 296 2 73
Desulfobulbaceae 48 1 5
Desulfohalobiaceae 23 99
Desulfomicrobiaceae 115 24
Desulfonatronaceae 23 98
Desulfovibrionaceae 686 452 34 327
Desulfurellaceae 5 6
Desulfurobacteriaceae 5 1
Desulfurococcaceae 1
Desulfuromonadaceae 57 171
Diapheromeridae 2
Dictyoglomaceae 36 1
Dictyosteliaceae 1
Dientamoebidae Grasse, 1953 1
Dietziaceae 4 67 22
Dipsadidae 1
Drosophilidae 1
Dunaliellaceae 1
Dysgonamonadaceae 49 318 4 252
Echinidae 1
Echinometridae 1
Ectothiorhodospiraceae 1 115 231
Edwardsiidae 8
Eggerthellaceae 823 485 38 318
Egibacteraceae 1
Egicoccaceae 1
Elassomatidae 1
Elusimicrobiaceae 7 32 6
Emcibacteraceae 58
Emplectonematidae 1
Enchytraeidae 1
Endomicrobiaceae 1
Endozoicomonadaceae 1 1
Enterobacteriaceae 641 337 35 327
Enterococcaceae 158 134 30 309
Entomoplasmataceae 35 150
Eremolepidaceae 1
Ericaceae 1
Erinaceidae 1
Erwiniaceae 190 136 4 98
Erysipelotrichaceae 837 497 39 344
Erythrobacteraceae 3 15 51
Estrildidae 1
Eubacteriaceae 324 497 39 340
Euglenaceae 1
Euphorbiaceae 1
Euzebyaceae 18 169
Fabaceae 11 2 99
Fastidiosibacteraceae 18
Faucheaceae 10
Ferrimonadaceae 26 4
Ferrovaceae Johnson et al. 2014 1
Fervidobacteriaceae 11
Fibrobacteraceae 154 94 39
Fimbriimonadaceae 18 2
Flammeovirgaceae 1 186 92
Flavobacteriaceae 502 270 3 280
Fortieaceae 6
Francisellaceae 2 51 19
Frankiaceae 3 4
Fusobacteriaceae 141 236 8 153
Gadidae 1
Gaiellaceae 2 25
Galagidae 1
Gallionellaceae 18 37
Geminicoccaceae 2 20
Gemmataceae 1 6 5
Gemmatimonadaceae 1 17 3
Gentianaceae 1
Geobacteraceae 25 23
Geodermatophilaceae 3 63 6
Geomyidae 1
Glareolidae 1
Gloeobacteraceae 8 1
Glossiphoniidae 1
Glyceridae 1
Glycomycetaceae 70 25
Gnetaceae 1
Gobiidae 1
Gomontiellaceae 46 1
Gomphaceae 1
Gomphosphaeriaceae 10
Gordoniaceae 4 41 10
Gottschalkiaceae 65 4
Gracilibacteraceae 8 227 4
Granulosicoccaceae 38 1
Haematopodidae 1
Haemodoraceae 1
Hafniaceae 14 29 2 12
Hahellaceae 89 33
Halanaerobiaceae 1 96 52
Halieaceae 1 41 1
Haliscomenobacteraceae 51 3
Halobacteriaceae 1
Halobacteriovoraceae 22 7
Halobacteroidaceae 165 28
Haloferacaceae 1
Halomonadaceae 1 245 2 122
Haloplasmataceae 1 10
Halothiobacillaceae 37 3
Hapalosiphonaceae 1
Harpacticidae 1
Helicobacteraceae 4 16 114
Heliobacteriaceae 89 4 155
Herpesviridae 1
Herpetosiphonaceae 4
Heteroleibleiniaceae 6
Holophagaceae 210 137
Holosporaceae 3
Hungateiclostridiaceae 155 495 38 301
Hyacinthaceae 1
Hydrocharitaceae 1
Hydrogenophilaceae 5 106 137
Hydrogenothermaceae 10 1
Hyellaceae 1
Hymenobacteraceae 4 80 215
Hyphomicrobiaceae 4 63 155
Hyphomonadaceae 1 271 39
Hypoxidaceae 1
Iamiaceae 3 12
Ichneumonidae 1
Ichthyobacteriaceae 1
Ictaluridae 1
Idiomarinaceae 21 21
Ignavibacteriaceae 1 23 33
Ilumatobacteraceae 39
Immundisolibacteraceae 3
Intrasporangiaceae 3 27 17
Ischnochitonidae 1
Isosphaeraceae 2 5 6
Ixodidae 1
Jiangellaceae 3 7
Jonesiaceae 41 4
Kallotenuaceae 10
Kangiellaceae 22 1
Kiloniellaceae 27 3 70
Kineosporiaceae 1 24 9
Kofleriaceae 1 17 24
Kordiimonadaceae 60
Kosmotogaceae 1 11
Labilitrichaceae 29
Lachnospiraceae 853 497 39 350
Lactobacillaceae 827 482 30 319
Lampyridae 1
Lanariaceae 1
Laqueidae 1
Lecanoraceae 1
Lecythidaceae 1
Legionellaceae 1 25 204
Lentisphaeraceae 4
Leptolyngbyaceae 2 2 79
Leptospiraceae 19 130
Leptotrichiaceae 53 87 50
Leuconostocaceae 114 452 10 259
Lewinellaceae 7 22
Limnochordaceae 2 1
Limulidae 1
Listeriaceae 1 139 229
Litoricolaceae 22 8
Lonchitidaceae 1
Lorisidae 1
lotus family 1
Lucinidae 1
Macropodidae 1
Magnetococcaceae 9 1
Malasseziaceae 2
Marinifilaceae 124 4
Marinilabiliaceae 1 267 8 1
Mariprofundaceae 1 13 1
mealybugs 3 11
Melioribacteraceae 334 16 4
Merismopediaceae 3
Meruliaceae 1
Mesoaciditogaceae 4
Methanobacteriaceae 232 129 5 109
Methanocorpusculaceae 1 1 2
Methanomassiliicoccaceae 41 22
Methanomethylophilaceae 23
Methanoregulaceae 1
Methanosarcinaceae 1
Methylacidiphilaceae 6
Methylobacteriaceae 9 38 31
Methylococcaceae 1 89 6
Methylocystaceae 1 10 7
Methylophilaceae 130 155
Methylothermaceae 21
Microbacteriaceae 68 272 137
Microbulbiferaceae 7
Micrococcaceae 178 240 27 153
Microcoleaceae 1 150 67
Microcystaceae 1 4
Micromonosporaceae 2 106 110
Micropepsaceae 12
Microscillaceae 54 1
Microthrixaceae 1
mitosporic Nectriaceae 1
mitosporic Venturiaceae 1
Mniaceae 1
moles, shrew-moles, and desmans 1
Monimiaceae 1
Mooreiaceae 4
Moraceae 1
Moraxellaceae 40 234 9 179
Morganellaceae 20 249 18 51
Moritellaceae 1 1
Mrakiaceae 1
Muribaculaceae 4
Mustelidae 1
Mycobacteriaceae 76 45 85
Mycoplasmataceae 17 325 6 264
Mytilidae 1
Myxococcaceae 3 4
Mzabimycetaceae 66
Nakamurellaceae 2 4
Nannocystaceae 13 15
Natranaerobiaceae 17 1
Nautiliaceae 13 2
Neisseriaceae 88 112 12 107
Nereididae 1
nightshade family 13 1
Nitriliruptoraceae 5 2
Nitrosomonadaceae 8 159 5 6
Nitrosopumilaceae 1
Nitrososphaeraceae 1 1
Nitrospinaceae 2
Nitrospiraceae 2 25 52
Nocardiaceae 24 6 40
Nocardioidaceae 4 183 56
Nocardiopsaceae 155 6
noctuid moths 1
Nostocaceae 2 2 278
Nothobranchiidae 1
Nototheniidae 1
Numididae 1
Nymphalidae 1
Oceanospirillaceae 135 78
Odontophoridae 1
Odoribacteraceae 655 465 35 323
Oleiphilaceae 3
Oligosphaeraceae 17
Onagraceae 1
Ophiostomataceae 1
Opitutaceae 1 27 5
Orbaceae 3 4
Orchidaceae 1
Orthomyxoviridae 1
Oscillatoriaceae 51 162
Oscillospiraceae 794 491 38 15
Oxalobacteraceae 280 240 26 220
Paenibacillaceae 3 419 32 271
Paludibacteraceae 1 54 3 8
Papilionidae 1
Papillomaviridae 1
Parachlamydiaceae 2 2
Paridae 1
Parvularculaceae 6 1
Pasteurellaceae 594 420 31 277
Pasteuriaceae 12
Patulibacteraceae 2 1 1
Pectobacteriaceae 3 205 1 20
Pelagibacteraceae 4 1
Peptococcaceae 559 463 26 324
Peptoniphilaceae 554 467 9 300
Peptostreptococcaceae 849 497 33 320
Peribunyaviridae 1
Persicobacteraceae 44 5
Petromyzontidae 1
Petrotogaceae 3 8
Pezizaceae 1
Phaffomycetaceae 1
Phasianidae 1
Phycisphaeraceae 2 1
Phyllobacteriaceae 40 16 10
Picornaviridae 1
Piscirickettsiaceae 2 147 53
Pitheciidae 1
Planctomycetaceae 2 45 5
Planoceridae 1
Planococcaceae 42 404 24 152
Plasmodiidae 1
Platanaceae 1
Pleosporaceae 1
Pleuronectidae 1
Poaceae 1
Polyangiaceae 2 3 20
Polygonaceae 1
Porphyromonadaceae 574 489 38 336
Porticoccaceae 1
Poxviridae 1
Prevotellaceae 627 497 24 333
Prochloraceae 2 5
Prochlorococcaceae 1
Prochlorotrichaceae 3 3
Prolixibacteraceae 68 1
Promicromonosporaceae 18 9
Propionibacteriaceae 143 197 15 32
Prorhynchidae 1
Proteidae 3
Proteinivoraceae 237 232
Psathyrellaceae 1
Pseudanabaenaceae 2 104
Pseudoalteromonadaceae 24 15
Pseudomonadaceae 71 213 11 82
Pseudonocardiaceae 1 133 121
Psychromonadaceae 18 9
Psyllidae 1
Pteromalidae 1
Puniceicoccaceae 7 203 196
Pyrenomonadaceae 1
Pyrodictiaceae 1
Pythonidae 1
Pyxicephalidae 1
Rallidae 1
Ranunculaceae 1
Rarobacteraceae 37
Retroviridae 1
Rhabdochlamydiaceae 34
Rhizobiaceae 18 55 15 100
Rhodanobacteraceae 1 96 203
Rhodobacteraceae 12 134 4 86
Rhodobiaceae 3 4 4
Rhodocyclaceae 76 199 211
Rhodospirillaceae 404 380 26 263
Rhodothalassiaceae 11 7
Rhodothermaceae 75 6 289
Rickettsiaceae 127 201
Rikenellaceae 779 491 38 45
Rivulariaceae 48 174
Rosaceae 1
Roseiarcaceae 3
Roseiflexaceae 1 9 1
rove beetles 3
Rubiaceae 1
Rubricoccaceae 3
Rubritaleaceae 81 99
Rubrobacteraceae 1 24 6
Ruminococcaceae 844 497 39 350
Saccharospirillaceae 189 10
Salicaceae 1
Salinibacteraceae 1
Salinisphaeraceae 12 1
Salinivirgaceae 1
Sandaracinaceae 5 1
Sanguibacteraceae 2 1
Sapindaceae 1
Saprospiraceae 27 24
Sarcoscyphaceae 1
Schleiferiaceae 8
Scincidae 1
Sciuridae 1
Scrophulariaceae 1
Scytonemataceae 1 4
Sedimentisphaeraceae 3
Segniliparaceae 17 1
Selenomonadaceae 117 281 14 289
Shewanellaceae 73 204
Simkaniaceae 7 1
Simmondsiaceae 1
Sinobacteraceae 3 59 238
Sironidae 1
Sneathiellaceae 4
Solibacteraceae 1 1
Solirubrobacteraceae 1 10 5
Soricidae 1
Sphaerobacteraceae 6
Spheniscidae 1
Sphingobacteriaceae 8 305 26 324
Sphingomonadaceae 29 269 14 84
Spirillaceae 1 14
Spirochaetaceae 1 46 87
Spiroplasmataceae 192 4
Spirulinaceae 4
Spongiibacteraceae 102 1
Sporichthyaceae 7 2
Sporidiobolaceae 1
Sporolactobacillaceae 73 76
Sporomusaceae 37 310 222
Staphylococcaceae 234 159 3 264
Stereaceae 1
Sternoptychidae 1
Sterolibacteriaceae 12 45 47
Stichodactylidae 1
Stomiidae 1
Streptococcaceae 842 495 39 343
Streptomycetaceae 98 2 96
Streptosporangiaceae 79 126
Succinivibrionaceae 16 132 86
Sulfolobaceae 7
Sutterellaceae 758 493 39 320
Symbiobacteriaceae 129 195
Synechococcaceae 1 7 104
Synergistaceae 251 194 1 237
Syntrophaceae 36 66
Syntrophobacteraceae 189 139
Syntrophomonadaceae 12 212 267
Syntrophorhabdaceae 1 16
Taeniidae 1
Tannerellaceae 770 490 37 324
Taphrinaceae 1
Temperatibacteraceae 1
Tenrecidae 1
Tephritidae 1
Termitidae 1
Tetranychidae 1
Theaceae 1
Thermaceae 1 40 153
Thermoactinomycetaceae 1 239 184
Thermoanaerobacteraceae 229 150 279
Thermoanaerobacterales Family III. Incertae Sedis 77 1 305
Thermoanaerobacterales Family IV. Incertae Sedis 11
Thermoanaerobaculaceae 40
Thermococcaceae 2
Thermodesulfobacteriaceae 14 49
Thermodesulfobiaceae 16 30 6 5
Thermogemmatisporaceae 5 20
Thermoleophilaceae 19
Thermolithobacteraceae 21
Thermomicrobiaceae 1
Thermomonosporaceae 40 97
Thermonemataceae 13
Thermoproteaceae 1
Thermosporotrichaceae 2
Thermotogaceae 1 31
Thermotomaculaceae 5
Thioalkalibacteraceae 1 2
Thioalkalispiraceae 1 35 3
Thiobacillaceae 5 21 39
Thiofilaceae 2
Thiolinaceae 2
Thioprofundaceae 5
Thiotrichaceae 1 53 215
Thorselliaceae 35
Thraupidae 1
Tischeriidae 1
Tissierellaceae 1 151 10
Togaviridae 1
Trichechidae 1
Trichocoleaceae Mai et Johansen (2018) nom. illegit. 2
Trionychidae 1
Trueperaceae 1 11
Trypanosomatidae 1
Tsukamurellaceae 1 2 35
unclassified Enterobacterales 1 7
unclassified Rhodospirillales 6 3
Veillonellaceae 810 492 35 342
Verrucomicrobia subdivision 3 4 1
Verrucomicrobiaceae 241 85 272
Vesicomyidae 1
Vespidae 1
Vibrionaceae 1 59 31
Vicinamibacteraceae 1
Victivallaceae 302 166 8 5
Viviparidae 25
Waddliaceae 2
Wenzhouxiangellaceae 20 1
Woeseiaceae 1
Xanthobacteraceae 2 12 8
Xanthomonadaceae 35 155 269
Yersiniaceae 27 81 7 222
Ziphiidae 1

genus

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zoogloeaceae 2 86 1 84
16SrXII (Stolbur group) 3
Abiotrophia 19 43 13
Absiella 209 211
Acanthopleuribacter 25
Acaryochloris 2
Acer 1
Acetanaerobacterium 131 248 1
Acetatifactor 2 454 1
Acetitomaculum 148 344 1
Acetivibrio 34 403 27
Acetoanaerobium 277 1
Acetobacter 13 5
Acetobacterium 201 311
Acetobacteroides 137
Acetohalobium 1 23
Acetomicrobium 20 2
Acetonema 119
Acholeplasma 7 318 1 235
Achromatium 2
Achromobacter 1 1 9 29
Acidaminobacter 138 94
Acidaminococcus 109 246 4 251
Acidianus 1
Acidibacter 25
Acidicaldus 1
Acidicapsa 38
Acidiferrobacter 5 3
Acidihalobacter 1
Acidimicrobium 37
Acidiphilium 1 1 17
Acidipropionibacterium 2 4
Acidisphaera 1
Aciditerrimonas 59
Acidithiobacillus 23 1
Acidobacterium 4
Acidocella 1
Acidothermus 27 1
Acidovorax 8 16 30
Acinetobacter 33 122 8 69
Acizzia 1
Acrocarpospora 3
Actimicrobium 2
Actinoallomurus 1
Actinoalloteichus 4
Actinobacillus 104 109 8 184
Actinobaculum 20 5 33
Actinocatenispora 45 88
Actinocorallia 4 1
Actinokineospora 1
Actinomadura 21 30
Actinomyces 637 404 11 255
Actinomycetospora 2 2
Actinoplanes 55 10
Actinopolymorpha 25
Actinopolyspora 70 83
Actinosynnema 1
Actinotignum 32 47 6
Adenophora 1
Adhaeribacter 12
Adlercreutzia 568 3 248
Advenella 6 3
Aequorivita 7 2 2
Aeribacillus 24 1
Aeriscardovia 75
Aerococcus 19 122 13
Aeromicrobium 2 3 5
Aeromonas 11 83 5 5
Aerosphaera 52
Aestuariispira 210 2
Afipia 1 3
Agaribacter 164
Agarilytica 1
Agarivorans 4 1
Agathiphaga 1
Agathobacter 1
Agathobaculum 1 468 9 5
Aggregatibacter 190 87 2 99
Agmenellum 1
Agreia 1
Agrobacterium 1 13
Agrococcus 3 1 8
Agromyces 33 62
Ahniella 1
Akkermansia 518 430 28 289
Akodon 1
Albidovulum 4
Albimonas 2
Alcaligenes 2 7 3
Alcalilimnicola 1
Alcanivorax 5 47
Algibacter 3 1
Algicola 22
Algimonas 6
Algiphilus 17
Algivirga 1
Algorimarina 1
Algoriphagus 53 3
Alicycliphilus 1 1 5
Alicyclobacillus 52 4 4
Aliiarcobacter 1
Aliidiomarina 12
Aliifodinibius 104
Aliihoeflea 1
Aliivibrio 1
Alishewanella 31 54
Alistipes 779 491 35 26
Alkalibacillus 2 26
Alkalibacter 47
Alkalibacterium 5 1 133
Alkalibaculum 99
Alkaliflexus 20 1
Alkalimarinus 6
Alkaliphilus 152 4 313
Alkalispirillum 1
Alkalispirochaeta 1
Alkalitalea 1
Alkanibacter 1
Alkanindiges 1 3
Allisonella 76 79 4
Allium 1
Alloactinosynnema 4
Allobaculum 9 67 33
Allocatelliglobosispora 1
Allochromatium 18
Allofrancisella 5 1
Allofustis 2 4
Allohahella 38 27
Alloiococcus 3 36 2
Allokutzneria 1 1
Alloprevotella 95 215 2 3
Alloscardovia 27 59 30
Alocasia 1
Alphainfluenzavirus 1
Alphavirus 1
Alsobacter 1
Altererythrobacter 3 6 4
Alteribacillus 1
Alternaria 1
Alterococcus 14
Alteromonas 12 4
Altibacter 1
Alysiella 2 2
Amanita 1
Amaricoccus 1 1 14
Amblyomma 1
Ambystoma 1
Ameyamaea 3
Aminicella 235
Aminiphilus 1 35
Aminipila 4
Aminivibrio 17
Aminobacter 1 5
Aminobacterium 8 12
Aminomonas 25 4
Ammonifex 5 106
Ammoniphilus 12 15
Amnibacterium 1
Amphibacillus 14 4
Amphritea 2 8
Amycolatopsis 3 10
Amylibacter 3
Anabaenopsis 1
Anaerobacillus 25 1 92
Anaerobacter 65
Anaerobacterium 49 18 4
Anaerobiospirillum 13
Anaerobium 151 20
Anaerobranca 230 252
Anaerobutyricum 1 465 33 12
Anaerocella 75
Anaerococcus 410 294 6 154
Anaerocolumna 398 8
Anaerofilum 261 243 8 312
Anaerofustis 213 301 77
Anaeroglobus 22 264
Anaerolinea 4 18 20
Anaeromassilibacillus 10
Anaeromusa 6 61
Anaeromyxobacter 289 2
Anaerophaga 5
Anaeroplasma 49 96 1 23
Anaerorhabdus 8
Anaerosalibacter 113
Anaerosinus 37 8
Anaerosphaera 42
Anaerospora 83
Anaerosporobacter 589 298 6
Anaerostipes 827 497 39 309
Anaerotaenia 3
Anaerotignum 460 22 5
Anaerotruncus 774 418 31 314
Anaerovibrio 9 4 1 284
Anaerovorax 286 20 14
Anaplasma 8 1
Anderseniella 4
Andreprevotia 1
Andropogon 1
Aneurinibacillus 1 34 3
Angelakisella 23
Annandia 2
Anopheles 1
Anoxybacillus 4 17 30
Anoxybacter 4
Anoxynatronum 317
Antarctobacter 1
Anthracocystis 1
aphid P-endosymbionts 1 1 4
Apibacter 1
Aplysia 1
Aquabacterium 5 15 2
Aquamicrobium 4
Aquaspirillum 10
Aquibacter 1 6
Aquicella 5
Aquiflexum 4 1
Aquihabitans 9
Aquimarina 7 7
Aquimonas 9 1
Aquincola 1
Aquipuribacter 1 3
Aquisalimonas 24
Aquisphaera 2
Aquitalea 3 7
Arabia 1 1
Arachidicoccus 3
Aramigus 1
Arcanobacterium 34 19 1 12
Archaeoglobus 1
Archangium 3 1
Arcicella 50
Arcobacter 2 4 24
Arcticibacterium 1
Arctostaphylos 1
Ardenticatena 10
Arenibacter 1 4
Arenimonas 18 1
Argyropelecus 1
Arhodomonas 8
Aridibacter 16
Armatimonas 1
Aromatoleum 1
Arsenicicoccus 1 1
Arsenophonus 24 7
Arthothelium 1
Arthrobacter 15 3 1 74
Arthronema 2
Arthrospira 1 1 7
Artocarpus 1
Arum 1
Arundinella 1
Asaccharobacter 11
Asaccharospora 103
Asaia 4 1
Asinibacterium 3
Asteroleplasma 73 127 1
Asticcacaulis 1 25 124
Atlantibacter 1
Atopobium 118 178 3 110
Atopococcus 11
Atopostipes 30
Aurantimicrobium 1
Aurantimonas 2
Auraticoccus 1 3
Aureibacter 4
Aureicoccus 1
Aureimonas 1 2 1
Aureispira 1
Aureitalea 3
Auricoccus 1
Auritidibacter 1
Austwickia 1
Avibacterium 32 37
Azoarcus 3 1 25
Azohydromonas 6
Azonexus 7
Azorhizobium 1 1
Azospira 12 2 1
Azospirillum 2 174 2 63
Azotomonas 1
Bacillus 81 222 1 229
Bacillus altitudinis complex 3
Bacteria 2
Bacterioplanes 1 1
Bacteriovorax 1 12 4
Bacteroides 838 497 38 350
Baia 37
Balneatrix 7
Balneola 100 32
Barnesiella 444 416 5 9
Barrientosiimonas 11
Bartonella 3 21
Basfia 3 1
Basilea 1
Batis 1
Bdellovibrio 1 4
Beduini 1
Beggiatoa 1 1
Beijerinckia 2
Belliella 13 3
Bellilinea 2
Belnapia 1 1
Bergeyella 15 6
Bernardetia 42 1
Betainfluenzavirus 1
Betapapillomavirus 1
Beutenbergia 1
Bibersteinia 1 2
Bifidobacterium 658 480 22 337
Bilophila 646 1 33 311
Biostraticola 15
Bisgaardia 36
Bittarella 8
Bizionia 2
Blancoa 1
Blastocatella 3
Blastochloris 3
Blastococcus 1 3
Blastocystis 2
Blastomonas 1
Blastopirellula 10
Blattabacterium 4
Blautia 841 497 39 350
Bogoriella 7
Bombiscardovia 1 3
Bordetella 30 4
Borrelia 3 15
Borreliella 4
Bosea 3 5 7
Bowmanella 33
Brachiaria 1
Brachybacterium 15 7 49
Brachymonas 1
Brachyspira 14 26
Bradymonas 1
Bradyrhizobium 12 1 16
Branchiibius 4
Brassicibacter 336 5
Brenneria 200 12
Breoghania 1
Brevefilum 1
Brevibacillus 50 1 30
Brevibacterium 71 53 31
Brevifollis 9
Brevinema 2
Brevundimonas 14 22 19
Brochothrix 6 209
Brockia 12
Brucella 2 1
Bryobacter 3
Bulleidia 5 32 1 59
Burkholderia 2 28 11 98
Burkholderia cepacia complex 7 1 5
Bursatella 1
Bursera 1
Buttiauxella 58 1 1
Butyricicoccus 79 294 37 7
Butyricimonas 482 435 31 272
Butyrivibrio 432 483 30 236
Bythopirellula 5
Caballeronia 11
Cabomba 1
Caedibacter 4
Caenispirillum 9
Caldalkalibacillus 65
Caldanaerobacter 1 46 20
Caldanaerobius 17
Caldanaerovirga 2
Caldicellulosiruptor 30 1 288
Caldicoprobacter 126 7
Caldilinea 4 124
Caldimicrobium 1 1
Caldimonas 11
Caldinitratiruptor 127
Caldisalinibacter 233
Caldisericum 1 1
Calditerrivibrio 4 1
Caldithrix 1 71
Callimico 1
Callithrix 1
Calochaete 6
Calolisianthus 1
Caloramator 1 326 10 306
Caloribacterium 6
Calothrix 48 161
Camarhynchus 1
Camelimonas 2
Camellia 1
Caminibacter 1 1
Caminicella 325 4
Campylobacter 296 207 7 130
Campylotropis 1
Candidatus Amoebophilus 274
Candidatus Aquiluna 1
Candidatus Arthromitus 4
Candidatus Atelocyanobacterium 1
Candidatus Azobacteroides 39
Candidatus Babela 2
Candidatus Blochmannia 86
Candidatus Cardinium 1
Candidatus Cloacimonas 1
Candidatus Contubernalis 38
Candidatus Endobugula 22
Candidatus Endolissoclinum 1
Candidatus Glomeribacter 140
Candidatus Gullanella 2
Candidatus Hepatoplasma 1
Candidatus Ishikawaella 1
Candidatus Izimaplasma 1
Candidatus Kinetoplastibacterium 4
Candidatus Koribacter 2
Candidatus Microthrix 1
Candidatus Midichloria 1
Candidatus Nitrosoglobus 1
Candidatus Nucleicultrix 1
Candidatus Pelagibacter 4 1
Candidatus Phlomobacter 7
Candidatus Phytoplasma 8 270
Candidatus Planktophila 1 2
Candidatus Portiera 1
Candidatus Protochlamydia 2
Candidatus Puniceispirillum 1
Candidatus Regiella 14
Candidatus Rhabdochlamydia 34
Candidatus Saccharimonas 20
Candidatus Scalindua 7
Candidatus Soleaferrea 540 4
Candidatus Solibacter 1
Candidatus Stoquefichus 127 1 1
Candidatus Sulcia 1 3
Candidatus Symbiobacter 1
Candidatus Tammella 146
Candidatus Vidania 1
Candidatus Walczuchella 1
Capnocytophaga 13 13 10
Caproiciproducens 1 31 4
Carboxydocella 14 191
Carboxydothermus 5 4
Carboxylicivirga 141 1
Carcinoscorpius 1
Cardiobacterium 10 70 8
Carnimonas 13
Carnobacterium 10 2 21
Carsonella 1
Casaltella 326 4
Cassena 1
Castellaniella 1
Catabacter 106 89 1
Catellicoccus 1 2
Catenibacterium 308 158 1 106
Catenisphaera 43 2
Catenovulum 1
Catenulispora 1 4
Catonella 11 475 17 272
Caulobacter 4 10 7
Cecembia 10
Cedecea 48
Celeribacter 3
Celerinatantimonas 6
Cellulomonas 32 13
Cellulophaga 4 4
Cellulosibacter 20
Cellulosilyticum 15 469 2 4
Cellulosimicrobium 3
Cellvibrio 14 4
Centipeda 19
Cerasicoccus 112 90
Cereibacter 1
Cesiribacter 20
Cetobacterium 4 17 18
Chamaesiphon 4 3
Chania 10 3
Chelativorans 4 1
Chelatococcus 2 1
Chelonobacter 1 10
Chiayiivirga 2
Chiropotes 1
Chishuiella 5
Chitinilyticum 2
Chitinimonas 12
Chitinispirillum 7
Chitinivibrio 2
Chitinolyticbacter 1
Chitinophaga 20 12
Chlamydia 1 2
Chloracidobacterium 10 3
Chlorobaculum 270
Chlorobium 1 1
Chlorococcum 1
Chloroflexus 1
Chlorogloeopsis 7
Chloroherpeton 10 4
Chloromonas 1
Chondrocystis 1
Chondromyces 2 16
Chordaria 1
Christensenella 137 68 17 13
Chromatium 3 93
Chromobacterium 8 26
Chromohalobacter 3
Chroococcidiopsis 2 1
Chroococcus 116
Chryseobacterium 11 34 44
Chryseolinea 11 4
Chryseomicrobium 11
Chrysopa 1
Chthoniobacter 4 17
Chthonomonas 35 3
Cichlasoma 1
Cintractia 1
Citreitalea 1
Citricoccus 1 1
Citromicrobium 3
Clarkia 1
Clavibacter 2 4
Cloacibacillus 116 72 19
Cloacibacterium 6 8 4
Clostridiisalibacter 5
Clostridioides 514 60 3 11
Clostridium 823 490 38 344
Cnuella 3
Cobetia 1
Cocleimonas 2
Coenonia 2
Cohaesibacter 1 1
Cohnella 30 143
Coleofasciculus 1
Colidextribacter 1 25
Colinus 1
Collimonas 15 5
Collinsella 814 428 34 283
Colwellia 17 4
Comamonas 31 23 22
Commensalibacter 2
Conchiformibius 1
Conexibacter 6 2
Confluentimicrobium 1
Congregibacter 3
coot 1
Coprinellus 1
Coprobacillus 171 241 5 316
Coprobacter 348 318 11 1
Coprococcus 2 497 33 343
Coprothermobacter 7 25 4
Coptodon 1
Coptothyris 1
Coraliomargarita 29 109
Corallibacter 1
Coriobacterium 11 2 52
Corticibacter 2
Cortinarius 1
Corynebacterium 497 290 9 185
Cottus 1
Coturnix 1
Couchioplanes 5 1
Couratari 1
Coxiella 12 1
Crambe 1
Cratogeomys 1
Craurococcus 2
Crepis 1
Criblamydia 24
Crinalium 1 1
Croceibacter 6 1
Croceicoccus 1
Cromidon 1
Cronobacter 88 38 4
Cronodrilus 1
Crossiella 1
Cruoricaptor 1 36
Cryobacterium 11 3 1
Cryomorpha 50
Cryptanaerobacter 1
Cryptobacterium 3 153 1
Cryptococcus 13
Cryptomonas 1
Cubophis 1
Cucumibacter 2
Culex 1
Culturomica 1
Cupriavidus 2 22 6
Curculigo 1
Curtobacterium 1 4
Curvibacter 10 3 17
Cutibacterium 50 6 8
Cyanobacterium 22 49
Cyanobium 1 3 1
Cyanothece 1
Cyclobacterium 22 4
Cycloclasticus 16 6
Cyclonatronum 3
Cygnodraco 1
Cylindrospermum 1
Cyphomandra 5 1
Cyphophthalmus 1
Cystobacter 19 9
Cytophaga 1 32 1
Dactylopterus 1
Dactylosporangium 3
Damaliscus 1
Danthonia 1
Dasania 11
Dasypus 1
Datura 1
Dechloromonas 46
Deefgea 3 1
Deferribacter 14 78
Deferrisoma 13
Defluviicoccus 6
Defluviimonas 3
Defluviitalea 2 97
Defluviitoga 1 1
Dehalobacter 116 5 4
Dehalobacterium 9 146
Dehalococcoides 20 3
Dehalogenimonas 88 62
Deinococcus 10 55 1 167
Delftia 81 5 10
Deltavirus 1
Demequina 24 1
Dendrosporobacter 31
Denitratisoma 1 6 39
Denitrobacter 1
Denitrobacterium 1 7 1
Denitrovibrio 3
Dermabacter 57 34 12
Dermacoccus 1 1 5
Dermatosorus 1
Derxia 17
Desemzia 93 1
Desertibacter 4
Desmospora 5
Desulfacinum 23
Desulfallas 15 1
Desulfarculus 81 1
Desulfatibacillum 1 1
Desulfatiferula 13
Desulfatiglans 4
Desulfatirhabdium 1
Desulfatitalea 5
Desulfitibacter 1 35 2
Desulfitispora 20
Desulfitobacterium 1 49 84
Desulfobacca 16 2
Desulfobacter 5 30
Desulfobacterium 147 1
Desulfobacula 3
Desulfobaculum 8
Desulfobotulus 3
Desulfobulbus 37 1
Desulfocapsa 1 1
Desulfocarbo 70
Desulfocella 1 154
Desulfococcus 3 4
Desulfocurvus 2
Desulfofaba 24
Desulfofarcimen 123 14
Desulfofrigus 19 28
Desulfofundulus 52 50
Desulfofustis 5
Desulfoglaeba 122
Desulfohalobium 3 3
Desulfohalotomaculum 343 36
Desulfohalovibrio 41
Desulfomicrobium 111 24
Desulfomonile 4 63
Desulfonatronobacter 3
Desulfonatronovibrio 4 73
Desulfonatronum 23 98
Desulfonauticus 6 31
Desulfonema 16
Desulfonispora 52
Desulfoplanes 8
Desulforegula 35
Desulforhabdus 1
Desulfosalsimonas 2
Desulfosarcina 16 20
Desulfosoma 68
Desulfosporosinus 1 116 1 163
Desulfotalea 1 2
Desulfothermus 4
Desulfotomaculum 2 390 10 181
Desulfovibrio 408 444 22 277
Desulfovirga 6
Desulfurella 3 6
Desulfuribacillus 3
Desulfurispira 2
Desulfurispirillum 86
Desulfurispora 271 143
Desulfurivibrio 2 1
Desulfurobacterium 4 1
Desulfurococcus 1
Desulfuromonas 33 17
Desulfuromusa 2 155
Dethiobacter 1 8 41
Dethiosulfatibacter 154
Dethiosulfovibrio 54 156
Devosia 1 35 123
Devriesea 1
Dialister 517 440 13 198
Diaphorobacter 1 3 1
Dichelobacter 2
Dichotomicrobium 5
Dickeya 9 1 12
Dictyoglomus 36 1
Dictyostelium 1
Dielma 332 284 9 4
Dientamoeba 1
Dietzia 3 67 22
Dinoroseobacter 1
Diplorickettsia 12
Diplosphaera 8
Dissulfuribacter 7
Dokdonella 8 137
Dokdonia 12 4
Dolichospermum 227
Dolosicoccus 2
Dolosigranulum 4 92
Dongia 100
Dorea 828 491 38 342
Doritaenopsis 1
Draconibacterium 9 1
Drimiopsis 1
Drosophila 1
Dubautia 1
Duganella 1 2
Duncaniella 4
Duodenibacillus 8 1
Dyadobacter 40 114
Dyella 3 2
Dysgonomonas 11 316 4 271
Echinicola 29 4
Echinometra 1
Echinops 1
Ectothiorhodosinus 3
Ectothiorhodospira 17 82
Edaphobacter 43
Edwardsiella 10 19
Effusibacillus 100
Eggerthella 608 381 25 270
Eggerthia 2 152
Egibacter 1
Egicoccus 1
Ehrlichia 9 104
Eikenella 11 4 1
Eionea 1
Eisenbergiella 545 370 25 2
Eisenibacter 54
Ekhidna 1
Elassoma 1
Elizabethkingia 22 6
Elodea 1
Elstera 3
Elusimicrobium 7 32 3
Emcibacter 58
Emergencia 1
Empedobacter 8 1
Emticicia 93 2 249
Enchytraeus 1
Endobacter 1
Endomicrobium 1
Endozoicomonas 1
Enhydrobacter 3
Enorma 81 53 3
Ensifer 1 11 1
Enterobacter 224 33 10 149
Enterococcus 152 91 29 275
Enterorhabdus 283 155 7 4
Enterovibrio 1
Enterovirus 1
Entomoplasma 13 11
Epibacterium 1
Epichloe 1
Epulopiscium 63 4 1
Ercella 130 1
Ereboglobus 3
Eremococcus 13 2
Erinaceus 1
Erwinia 1 95 1 100
Erysipelatoclostridium 801 495 36 11
Erysipelothrix 317 3 271
Erythrobacter 8 48
Escherichia 1 51 12 242
Ethanoligenens 407 163
Eubacterium 168 497 39 334
Eucorethra 1
Eudoraea 40
Eudyptes 1
Euglena 1
Euphorbia 1
Euryhalocaulis 7
Euzebya 18 169
Euzebyella 1
Exiguobacterium 20 8
Exserohilum 1
Extensimonas 1
Ezakiella 26 1
Fabibacter 6
Facklamia 56 363 52
Faecalibacterium 819 496 38 347
Faecalibaculum 1
Faecalicatena 312 22
Faecalicoccus 298 4 1
Faecalitalea 57 19 38
Falcatimonas 1 15
Falsiporphyromonas 133
Fangia 14
Fastidiosipila 82 38 2 3
Fenollaria 268 5 1
Fergusonia 1 6
Fermentimonas 4
Ferrimicrobium 2 7
Ferrimonas 26 4
Ferrithrix 79
Ferrovibrio 2
Ferrovum 1
Ferruginibacter 1 37
Fervidicella 4
Fervidobacterium 11
Fibrella 3
Fibrobacter 95 89 39
Fictibacillus 21 4
Ficus 1
Filifactor 2 159 19 102
Filimonas 1 4
Fimbriimonas 18 2
Finegoldia 473 363 6 166
Fischerella 1
Flammeovirga 22 92
Flavicella 4
Flaviflexus 10 3
Flavihumibacter 2
Flavisolibacter 1 1 12
Flavitalea 1 5
Flavivirga 1
Flavobacterium 428 23 16
Flavonifractor 815 476 33 13
Flectobacillus 45
Flexibacter 1 4 2
Flexistipes 34 1
Flexithrix 8
Flexivirga 1
Flintibacter 26
Fluoribacter 1
Fluviicola 14 3 1
Fluviimonas 186
Fodinibius 2
Fodinicurvata 215 1
Fontibacter 9
Fonticella 2 52
Formosa 5
Fournierella 1 16
Francisella 2 37 19
Franconibacter 5
Frankia 4
Fratercula 1
Frateuria 2 1
Fretibacter 14
Fretibacterium 103 1
Friedmanniella 14 7
Frigoribacterium 1 1
Frischella 1 3
Frondicola 1 1
Fructobacillus 18 21
Fuchsiella 4
Fucophilus 2
Fulvitalea 35
Fulvivirga 47
Fusarium fujikuroi species complex 1
Fusibacter 93 23
Fusicatenibacter 799 491 18 3
Fusobacterium 141 221 6 145
Gabonibacter 10
Gadus 1
Gaetbulibacter 1
Gaiella 2 25
Galago 1
Galenea 22
Gallaecimonas 3
Gallibacterium 1 18 8
Gallicola 76 30 1
Gallionella 15 37
Garciella 7
Gardnerella 44 51 2 18
Garritya 2
Gelria 228 1
Gemella 185 223 4 294
Geminicoccus 1 20
Geminocystis 1
Gemmata 1 4 5
Gemmatimonas 15 3
Gemmatirosa 2 1
Gemmiger 448 18
Gemmobacter 4
Gentiana 1
Geoalkalibacter 1
Geobacillus 6 26 12 119
Geobacter 20 23
Geodermatophilus 6 2
Geofilum 43
Geomicrobium 10
Geopsychrobacter 4
Georgenia 15 4
Geosporobacter 4
Geothermobacter 1
Geothrix 157 137
Geovibrio 1 13
Gibbsiella 4
Giesbergeria 1 2
Gilliamella 1
Gillichthys 1
Gillisia 15 180
Gilvimarinus 1
Gimesia 2
Glaciecola 42 63
Glaciimonas 2
Glaesserella 2 1
Gliocladium 1
Globicatella 2 13
Gloeobacter 8 1
Gloriosa 1
Glossogobius 1
Gluconacetobacter 7 2
Gluconobacter 2 37
Glutamicibacter 34 37
Glycera 1
Glycocaulis 1 1
Glycomyces 8 24
Gorbachella 1 1
Gordonia 4 40 10
Gordonibacter 482 261 26 8
Gottschalkia 65 4
Gracilibacillus 53
Gracilibacter 3 227 3
Gracilimonas 142
Gramella 3 50
Granulibacter 4
Granulicatella 363 44 145
Granulicella 7 13
Granulosicoccus 36 1
Gryllotalpicola 6 1
Guggenheimella 180
Guttera 1
Guyparkeria 1 2
Gymnocintractia 1
Gynuella 21 1
Haematobacter 3 3
Haematospirillum 2
Haemophilus 573 391 22 250
Hafnia 14 1 2 1
Hahella 89 33
Halanaerobacter 1 3
Halanaerobaculum 3
Halanaerobium 4 52
Halarsenatibacter 32
Haliangium 1 16 24
Haliea 1 6
Halioglobus 1 1
Haliscomenobacter 43 3
Halobacillus 18 4
Halobacteriovorax 22 7
Halobacteroides 3 1
Halocella 5 4
Halochromatium 99 24
Halodesulfovibrio 4
Haloferax 1
Haloferula 17
Halolactibacillus 4
Halomicronema 1 3
Halomonas 1 221 1 53
Halonatronum 3
Haloplasma 1 10
Halopolyspora 67
Halorhodospira 31 17
Halospina 7
Halospirulina 1
Halotalea 1
Halothermothrix 65 1
Halothiobacillus 19 2
Halyseosphaera 1
Hartmannibacter 1
Hathewaya 262 286
Hazenella 10
Helcococcus 22 70 46
Heleococcum 1
Helicobacter 4 15 114
Heliimonas 5
Heliobacterium 3 1
Heliomonas 1
Heliophilum 6
Heliorestis 5 133
Heliothrix 1
Hellea 5
Hemizonia 1
Henriciella 207
Heratemis 1
Herbaspirillum 269 28 13 145
Herbinix 182 6 4
Herichthys 1
Herminiimonas 91 27
Herpetosiphon 4
Hespellia 523 477 16
Hilliella 1
Hippea 2 1
Hirschia 1
Histophilus 4 1
Hoeflea 1
Holdemanella 287 4 129
Holdemania 604 412 23 295
Holophaga 1
Hoppeia 2
Hordeum 1
Howardella 136 345 4
Hoyosella 22
Hugenholtzia 15
Humibacter 9
Hungateiclostridium 2 387 4 293
Hungatella 464 34 7
Hwangdonia 8
Hydatigera 1
Hydnotryopsis 1
Hydrocarboniphaga 1 235
Hydrocoleum 3
Hydrogenibacillus 40 5
Hydrogenispora 248
Hydrogenoanaerobacterium 241 410
Hydrogenobacter 1 3
Hydrogenobaculum 4
Hydrogenophaga 1 2 1
Hydrogenophilus 3 99 130
Hydrogenothermus 7
Hydrogenovibrio 12 5
Hydrotalea 1 12
Hylemonella 1
Hymenobacter 3 15 211
Hyperoodon 1
Hyperoplus 1
Hyphomicrobium 2 9 44
Hyphomonas 4 36
Iamia 1 3
Ianmoorea 3
Icaria 1
Ichthyobacterium 1
Ideonella 2
Idiomarina 8 21
Ignatzschineria 5
Ignavibacterium 23 33
Ignavigranum 2 48
Ihubacter 29
Ileibacterium 3
Ilumatobacter 39
Ilyobacter 4
Immundisolibacter 3
Imperialibacter 16
Indibacter 13
Indioceanicola 3
Inquilinus 5 3
Insolitispirillum 118 169
Intestinibacillus 9
Intestinibacter 817 417 21 4
Intestinimonas 765 477 37 12
Iodobacter 6 3
Isochromatium 2
Janibacter 2 1 2
Jannaschia 1 1
Janthinobacterium 4 6
Jatropha 1
Jatrophihabitans 3 1
Jeotgalibaca 3
Jeotgalibacillus 2
Jeotgalicoccus 2 28 4
Jiangella 1 10
Johnsonella 17 339 313
Jonesia 41 4
Jonquetella 11 53 1
Julidochromis 1
Kaistia 17 10
Kallipyga 38 1
Kallotenue 10
Kandleria 79
Kangiella 21 1
Kappapapillomavirus 1
Kastovskya 3
Keratinibaculum 7
Ketobacter 1
Ketogulonicigenium 1 1
Kiloniella 27 3
Kineococcus 4 2
Kineosporia 4
Kingella 12 3 5
Kistimonas 1
Kitasatospora 5 19
Klebsiella 157 55 8 94
Kluyvera 575 4 5
Kockovaella 1
Kocuria 14 18 16
Kohautia 1
Komagataeibacter 18 3
Kordia 1
Kordiimonas 2
Koreibacter 2
Kosakonia 119 13
Kosmotoga 1 11
Kozakia 1 3
Kribbella 139 21
Kushneria 1 3 65
Kutzneria 1
Kyrpidia 58 1
Kytococcus 2 2
Labilibacter 2
Labilithrix 29
Labrenzia 1
Labrys 1
Laceyella 4 30
Lachnoanaerobaculum 23 477 4
Lachnobacterium 13 365 29 294
Lachnoclostridium 2 497 39 13
Lachnospira 757 458 35 342
Lachnotalea 3
Lacibacter 3 2
Lacibacterium 62
Lacihabitans 5
Lacimicrobium 1
Lacinutrix 1 4
Lactobacillus 618 479 24 304
Lactococcus 287 276 10 159
Lactonifactor 503 344 29
Lactovum 121
Lacunisphaera 3
Lagierella 1
Lampetra 1
Lamprocystis 2
Laribacter 1 3
Larkinella 1
Lautropia 20 20 19
Lawsonella 1
Lawsonia 275 6
Lebetimonas 6
Lecanora 1
Leclercia 1
Legionella 1 25 204
Leifsonia 2 1 1
Leishmania 1
Leisingera 1
Lelliottia 104
Leminorella 1 1
Lentibacillus 26 48
Lentisphaera 4
Lentivirus 1
Lentzea 3
Lepidocolaptes 1
Lepidozona 1
Leptofauchea 10
Leptolinea 47
Leptolyngbya 2 1 88
Leptonema 8
Leptospira 8 130
Leptospirillum 11 1
Leptothrix 64
Leptotrichia 43 24 20
Leucobacter 20 8
Leucocintractia 1
Leuconostoc 88 361 4 164
Leucothrix 3 11
Levilinea 1
Levinea Young et al. 1971 62 17 19 69
Levyella 199 1
Lewinella 7 23
Libanicoccus 1 1
Liberibacter 2 6 30
Limibacillus 12
Limibacter 2
Limimaricola 1
Limimonas 3
Limisphaera 4
Limnobacter 1 17 218
Limnobaculum 1
Limnochorda 2 1
Limnohabitans 2 4
Limnoraphis 2
Lishizhenia 2
Listeria 1 137 63
Litoribacillus 42
Litoribacter 11
Litoribrevibacter 5
Litoricola 22 8
Litorilinea 7
Litorilituus 35 4
Loktanella 5 1
Lonchitis 1
Longilinea 1 2
Longimonas 36
Lucinoma 1
Ludwigia 1
Luminiphilus 33
Luna cluster 1 1 3
Lunatimonas 2
Lupinus 1
Luteibacter 1 30 177
Luteibaculum 1
Luteimonas 16 9
Luteipulveratus 1
Luteitalea 1
Luteivirga 4
Luteococcus 13
Luteolibacter 1 16 149
Lutibacter 1 15 4
Lutispora 114 1
Lutra 1
Lysinibacillus 9 10 55
Lysinimonas 1
Lysobacter 2 44 70
MAC 3
Macaca 1
Macrococcus 1 7 156
Macropus 1
Madoqua 1
Mageeibacillus 1
Magnetococcus 9 1
Magnetospira 3 1
Magnetospirillum 4 2
Magnetovibrio 3
Mahella 11
Malassezia 2
Maledivibacter 21
Mangrovibacter 1
Mangroviflexus 2
Mannheimia 8 41 124
Maribacter 1 5
Maricaulis 10 3
Marichromatium 1 10 54
Marinicauda 1
Marinicella 8
Marinifilum 124
Mariniflexile 3 4
Marinilabilia 26 1
Marinilactibacillus 4
Marinimicrobium 1
Marininema 2
Mariniphaga 16
Mariniradius 7
Marinitalea Kim et al. 2011 1
Marinithermofilum 2
Marinithermus 2
Marinitoga 2 8
Marinobacter 84 15
Marinobacterium 20 4
Marinococcus 4 19
Marinomonas 19 5
Marinoscillum 20
Marinospirillum 26 57
Marinovum 1
Mariprofundus 13 1
Marispirillum 38
Maritalea 1
Maritimibacter 1
Marivirga 2 1
Marivivens 1
Marixanthomonas 16
Marmoricola 10 1
Marseillibacter 1 36
Martelella 1 2
Marvinbryantia 636 433 3 4
Massilia 7 13 20 4
Massilioclostridium 1 24
Massiliprevotella 3
Mastadenovirus 1
Mechercharimyces 8 2
Mediterranea 3
Megamonas 69 143 2 56
Meganema 15
Megasphaera 567 300 296
Meiothermus 1 16 134
Meiracyllium 1
Melaminivora 1
Melanochromis 1
Melghiribacillus 3
Melghirimyces 21
Melioribacter 334 11 4
Melissococcus 2 18
Melittangium 5 1
Meniscus 18
Merdibacter 1 7
Merdimonas 1
Mesoaciditoga 4
Mesoflavibacter 1
Mesonia 7 1
Mesoplasma 12 150
Mesorhizobium 10 5 5
Mesotoga 1
Metabacterium 1 2
Metakosakonia 2 1
Metallibacterium 1
Metallosphaera 6
Metaprevotella 3
Metarhizium 1
Methanimicrococcus 1
Methanobrevibacter 228 124 4 104
Methanocorpusculum 1 1 2
Methanolinea 1
Methanomassiliicoccus 26 22
Methanomethylophilus 23
Methanosphaera 40 19 2 23
Methylacidimicrobium van Teeseling et al. 2014 1
Methylarcula 12
Methylibium 4
Methylobacillus 48 152
Methylobacter 7
Methylobacterium 9 20 29
Methylocaldum 2 4
Methyloceanibacter 1
Methylocella 4 16
Methylococcus 1
Methylocystis 5 2
Methylogaea 1 30
Methyloglobulus 36
Methylohalobius 12
Methylohalomonas 5
Methylokorus 1
Methyloligella 2
Methylomagnum 4
Methylomarinovum 9
Methylomicrobium 4 3
Methylomonas 6 4
Methylomusa 4
Methylonatrum 2 194
Methyloparacoccus 2
Methylophaga 85 10
Methylophilus 14
Methylorubrum 4
Methylosinus 6
Methylosoma 1
Methylosphaera 4
Methylotenera 48 3
Methylothermus 1
Methyloversatilis 33 12
Methylovulum 1
Micavibrio 3
Microaerobacter 13
Microbacter 99
Microbacterium 11 121 74
Microbaicalia 1
Microbulbifer 7
Microcerotermes 1
Microchaete 3
Micrococcus 10 2 5
Microcoleus 50
Microcystis 1 4
Microlunatus 24 2
Micromonospora 5 21
Micropruina 1 1
Microscilla 1
Microterricola 4
Microtetraspora 2 5
Microvirga 1 5 3
Microvirgula 2
Millisia 1
Miniimonas 1
Mitsuaria 3
Mitsuokella 18 43 3 144
Mixta 1
Mizugakiibacter 9
Mobilitalea 63 2
Mobiluncus 130 168 2 43
Modestobacter 2 55
Modicisalibacter 1
Mogibacterium 529 350 1 278
Moheibacter 10
Molineria 1
Mongoliicoccus 9
Mongoliitalea 1
Monoglobus 4
Moorea 35 4
Mooreia 4
Moorella 15 245
Moraxella 14 138 10
Mordavella 1 6 4
Morganella 4 103 1 36
Moritella 1 1
Moryella 700 373 4 51
Mucilaginibacter 23 5 4
Mucinivorans 26 1
Mucispirillum 3 2
Murdochiella 248 1 4
Muribaculum 4
Muricauda 1 12
Muriicola 1
Murimonas 457 3
Myceligenerans 8
Mycetohabitans 8
Mycobacterium 33 23 85
Mycobacterium chelonae complex 3
Mycobacterium complex 3
Mycobacterium terrae complex 3
Mycolicibacterium 1 11 11
Mycoplana 1
Mycoplasma 10 318 1 263
Myroides 12 10
Mytilus 1
Myxococcus 1 1
Nafulsella 9
Nakamurella 2 4
Nannocystis 10 15
Nanoscypha 1
Nardonella 1
Natranaerobaculum 3
Natranaerobius 13 1
Natranaerovirga 312 7
Natribacillus 1
Natroniella 4
Natronincola 45 262
Naumannella 7
Nautilia 5 1
Ndongobacter 1
Necropsobacter 9
Negativibacillus 1 29 3
Negativicoccus 131 132 126
Neglecta 1
Neisseria 81 35 12 73
Nelumbo 1
Neoasaia 1 1
Neochlamydia 1
Neorhizobium 4
Neorickettsia 1 7
Neoscardovia 40
Neptuniibacter 2
Neptunomonas 1 1
Nereis 1
Nesterenkonia 54 9
Nevskia 1 3 10
Niabella 1 354 81
Niastella 1 3 2
Nibribacter 31
Nicoletella 4
Nigella 1
Nisaea 24
Nitratifractor 2
Nitratireductor 4
Nitratiruptor 1 1
Nitriliruptor 5 2
Nitrincola 1 1
Nitrobacter 4 1
Nitrococcus 16
Nitrolancea 4
Nitrosococcus 1 15 46
Nitrosomonas 2 154 5 3
Nitrosopumilus 1
Nitrososphaera 1 1
Nitrosospira 1 3 2
Nitrosovibrio 1
Nitrospina 2
Nitrospira 1 7 2
Nitrospirillum 3 1
Niveispirillum 106 1
Nocardia 3 5
Nocardioides 3 56 4
Nocardiopsis 19 6
Nodularia 1 43
Nonomuraea 13 50
Norovirus 1
Nosocomiicoccus 6
Nostoc 1 111
Novibacillus 8 4
Noviherbaspirillum 11
Novispirillum 65 187
Novosphingobium 7 18 11
Oblitimonas 1
Oceanibaculum 1
Oceanicoccus 27 1
Oceanimonas 3 1
Oceanirhabdus 4
Oceanisphaera 2 2
Oceanithermus 1
Oceanobacillus 14 4
Oceanobacter 1
Oceanospirillum 38 6
Oceanotoga 1
Ochrobactrum 28 3 30
Octadecabacter 3 3
Odoribacter 622 395 33 304
Oenococcus 40 66
Oerskovia 1
Ohtaekwangia 37
Okeania 2
Oleibacter 3
Oleiphilus 3
Oleispira 2
Oleomonas 24
Oligella 8 14 23
Oligosphaera 17
Oligotropha 1
Olivibacter 4 240
Olleya 4
Olsenella 64 239 9 35
Opitutus 1 6 5
Orbus 2
Orenia 30
Oreochromis 1
Oribacterium 41 487 28 286
Orientia 54 1
Ornatilinea 4
Ornithinicoccus 1 2
Ornithinimicrobium 4
Ornithobacterium 3 4
Orrella 1
Orthobunyavirus 1
Orthopoxvirus 1
Oscillatoria 74
Oscillibacter 742 491 38 15
Oscillospira 622 1 32 332
Osmadenia 1
Otariodibacter 10
Ottowia 3
Owenweeksia 1 1
Oxalicibacterium 52
Oxalobacter 151 8 162
Oxalophagus 1 21
Oxobacter 5 119
Oxybasis 1
Oxynema 2
Paenalcaligenes 1 1
Paenarthrobacter 1 1
Paenibacillus 1 390 13 126
Paeniclostridium 52 4
Paeniglutamicibacter 1
Paenisporosarcina 34 8
Pagothenia 1
Palicourea 1
Paludibacter 55 3 8
Paludibacterium 3
Paludibaculum 6
Paludisphaera 3
Pamelaescincus 1
Panacagrimonas 2
Pandoraea 12 5
Pannonibacter 4
Panonychus 1
Pantoea 189 73 1 12
Papilio 1
Papillibacter 418 248 29
Parabacteroides 762 491 37 348
Paraburkholderia 39 1 79
Parachlamydia 1 1
Paraclostridium 22
Paracoccus 1 20 24
Paraeggerthella 15 49
Parafilimonas 28
Parageobacillus 4 18
Paraglaciecola 6 1
Paraliobacillus 3
Parapanteles 1
Parapedobacter 13 117
Paraperlucidibaca 1
Paraphotobacterium 1
Paraprevotella 212 428 8 254
Pararheinheimera 6
Pararhodospirillum 1 1
Parasaccharibacter 5 1
Parascardovia 4 3 97
Parascaris 1
Parasegetibacter 2
Parashewanella 2 1
Parasporobacterium 171 197 17
Parasutterella 596 458 24 9
Parechinus 1
Parolsenella 1
Parvibacter 94 28 1
Parvibaculum 1
Parvimonas 96 94 5
Parvularcula 6 1
Pasteurella 20 12 30
Pasteuria 12
Patulibacter 2 1 1
Paucibacter 2 11
Paucimonas 2
Pectinatus 75 1 250
Pectobacterium 3 36 4
Pediococcus 34 57 202
Pedobacter 4 157 23 313
Pedomicrobium 1 2 11
Pelagibaca 1
Pelagibacterium 1
Pelagibius 2
Pelagicoccus 32 93
Pelistega 1 3
Pelobacter 22 11
Pelodictyon 1
Pelodiscus 1
Pelolinea 4 1
Pelomonas 20 4 4
Pelosinus 129 4
Pelospora 24
Pelotomaculum 49 131
Pelvicachromis 1
Penicillium 1
Peptoanaerobacter 16
Peptoclostridium 665 79 1
Peptococcus 406 199 5 308
Peptoniphilus 440 404 6 312
Peptostreptococcus 206 205 2 97
Perameles 1
Peredibacter 5
Perexilibacter 21
Perlucidibaca 3
Permianibacter 22
Perodicticus 1
Persephonella 1
Persicaria 1
Persicirhabdus 11
Persicitalea 31
Persicobacter 5 5
Petrimonas 13 4
Petrotoga 2
Petunia 1
Phaeobacter 11
Phaeobacterium 6
Phaeochromatium 7
Phaeocystidibacter 7
Phaeodactylibacter 8
Phaffomyces 1
Phascolarctobacterium 555 421 19 316
Phaseolibacter 2
Phenylobacterium 2 12 16
Phlebia 1
Phocaeicola 1 114
Phocea 11
Phoenicibacter 1
Phormidium 2
Photobacterium 1 16 5
Photorhabdus 60 4
Phreatobacter 1 1
Phycicoccus 1
Phycisphaera 2 1
Phyllobacterium 30 1
Phytoactinopolyspora 2
Phytomonospora 25
Pigmentiphaga 18
Pilibacter 14
Pilimelia 1 9
Pimelobacter 3
Pirellula 11 2
Pisciglobus 15
Piscinibacter 3
Piscirickettsia 9 1
Plagiomnium 1
Planctomyces 1 3
Planctopirus 1 2
plane trees 1
Planifilum 1 11 177
Planktomarina 2
Planktothrix 1 3
Planococcus 49 54
Planomicrobium 38 3 7
Plantactinospora 1 1
Plantibacter 1 1
Plasmodium 1
Plasticicumulans 83
Pleionea 1
Pleomorphomonas 5 1
Plesiocystis 3
Pleurocapsa 1
Pleuronectes 1
Pluralibacter 18 10
Polaribacter 1 8
Polaromonas 2 7
Polycladomyces 22
Polymorphobacter 2
Polymorphum 3
Polynucleibacter 57
Pontibacillus 84 86
Pontibacter 1 9 144
Ponticaulis 2
Pontivivens 1
Populus 1
Porphyrobacter 1 2 1
Porphyromonas 367 397 16 292
Portibacter 2
Porticoccus 1
Povalibacter 1
Pragia 149 4
Prauserella 2
Prevotella 481 496 23 332
Prochlorococcus 2 5
Prochlorothrix 2
Prognathochromis 1
Prolixibacter 3
Promicromonospora 1 3
Propionibacterium 121 16 12 17
Propionicimonas 1 4
Propioniferax 3 85
Propionigenium 3 12
Propionimicrobium 11
Propionispira 2 17
Propionispora 36 230
Propionivibrio 2 32 21
Prosthecobacter 15 66
Prosthecochloris 1 4
Proteiniborus 116
Proteiniclasticum 1
Proteiniphilum 40 14 4
Proteinivorax 48
Proteocatella 97 3
Proteus 17 86 17 15
Providencia 108 19
Prunus 1
Psathyrostachys 1
Pseudacidovorax 2
Pseudaeromonas 23
Pseudaminobacter 1
Pseudanabaena 4
Pseudarcicella 29 1
Pseudarthrobacter 1
Pseudescherichia 16
Pseudoalteromonas 15
Pseudobacteroides 8
Pseudobutyrivibrio 833 301 27 310
Pseudocentrotus 1
Pseudochrobactrum 1 12 4
Pseudoclavibacter 54 190 15
Pseudoclostridium 3 244
Pseudodesulfovibrio 57 5
Pseudoduganella 6
Pseudoflavitalea 4
Pseudoflavonifractor 498 414 31 7
Pseudofulvibacter 1
Pseudofulvimonas 1
Pseudoglutamicibacter 12 2 2
Pseudogulbenkiania 1
Pseudohongiella 5 2
Pseudokineococcus 10
Pseudolabrys 1
pseudomallei group 4
Pseudomaricurvus 2
Pseudomonas 70 203 7 82
Pseudomonas chlororaphis group 15
Pseudonocardia 15 13
Pseudooceanicola 1
Pseudopedobacter 116 1 1
Pseudopropionibacterium 6 2
Pseudoramibacter 3 58 138
Pseudorhodobacter 55
Pseudorhodoferax 1
Pseudorhodoplanes 1
Pseudoscardovia 316
Pseudoscillatoria 224
Pseudospirillum 1
Pseudothermotoga 4
Pseudovibrio 2 1
Pseudoxanthobacter 4
Pseudoxanthomonas 6 22 6
Pseudozyma 1
Psychrilyobacter 11
Psychrobacter 2 77 145
Psychroflexus 23 29
Psychromicrobium 1
Psychromonas 18 9
Psychroserpens 2 5
Psychrosinus 10
Psychrosphaera 2
Pullulanibacillus 58 2
Puniceicoccus 72 30
Pusillimonas 3 1
Pylodictis 1
Pyramidobacter 50 19
Pyrenomonas 1
Pyrinomonas 20
Pyrobaculum 1
Pyrocoelia 1
Pyrodictium 1
Pyxidicoccus 2
Qipengyuania 1
Quadrisphaera 1
Quasibacillus 13
Raffaelea 1
Rahnella 12 1
Ralstonia 16 8 21
Ramaria 1
Ramlibacter 3 2
Rangifer 1
Raoultella 32 1 5
Raoultibacter 11
Raphidiopsis 3
Rapidithrix 6
Rarobacter 37
Rathayibacter 2 1 2
Rehaibacterium 2
Reichenbachiella 7
Reinekea 92 1
Renibacterium 1
Renobacter 4
Reyranella 6
Rhabdochromatium 9
Rheinheimera 4 45 3
Rhizobacter 7
Rhizobium 13 22 5 6
Rhizomicrobium 12
Rhodanobacter 35 1
Rhodobaca 1
Rhodobacter 4 3 30
Rhodobium 1
Rhodococcus 24 3 68
Rhodocyclus 1
Rhodocytophaga 1 22
Rhodoferax 2 21
Rhodoluna 3
Rhodomicrobium 3 1
Rhodonellum 21
Rhodopila 1
Rhodopirellula 1 1
Rhodoplanes 1 1 14
Rhodopseudomonas 5 15 4
Rhodospira 5
Rhodospirillum 1 2 155
Rhodosporidiobolus 1
Rhodothalassium 11 7
Rhodothermus 4 284
Rhodovibrio 18 70
Rhodovulum 3 23 4
Rickettsia 93 201
Rickettsiella 10
Riemerella 3 3
Rikenella 2 3 13
Risungbinella 15
Rivibacter 1
Rivicola 5
Rivularia 29
Robbsia 6
Robiginitalea 1 1
Robiginitomaculum 4
Robinsoniella 180 379 33
Rodentibacter 20 4
Romboutsia 548 434 3 1
Roseateles 3 1
Roseburia 837 497 39 344
Roseiarcus 3
Roseibacterium 1 1
Roseiflexus 8 1
Roseimarinus 5
Roseimicrobium 18
Roseitalea 1
Roseivirga 28
Roseivivax 2
Rosenbergiella 97
Roseobacter 4
Roseococcus 1 7 10
Roseomonas 4 9 43
Roseospira 6 44
Roseovarius 1 2 3
Rothia 157 10 24 208
Rubellimicrobium 3 10 5
Rubidibacter 2
Rubidimonas 26
Rubinisphaera 3
Rubribacterium 1
Rubritalea 81 107
Rubritepida 1
Rubrivivax 2 2
Rubrobacter 1 24 6
Rudaea 5
Rudanella 2
Ruegeria 1
Rufibacter 23 4
Ruminiclostridium 34 485 38 145
Ruminobacter 36 1
Ruminococcus 2 497 39 347
Rummeliibacillus 1 23 2
Runella 40 134
Ruthenibacterium 1 33 6
Saccharibacillus 14
Saccharibacter 11
Saccharicrinis 32
Saccharofermentans 81 2
Saccharomonospora 105 3
Saccharophagus 1
Saccharopolyspora 32 103
Saccharospirillum 9
Saccharothrix 1 1
Sagittula 1
Saguinus 1
Salegentibacter 4
Salibacterium 5
Salimicrobium 14 3
Salinibacillus 12
Salinibacter 1
Salinibacterium 2
Salinicoccus 45 161
Salinicola 1 1
Salinimicrobium 1 1
Salinimonas 4
Salinisphaera 12 1
Salinispira 4
Salinispirillum 111
Salinispora 1
Salinivenus 1
Salinivibrio 17 8
Salinivirga 1
Salipiger 1
Salisaeta 39 66
Salmonella 4 7 20 50
Sambucus 1
Sandaracinobacter 1
Sandaracinus 5 1
Sanguibacter 2 1
Sapovirus 1
Saprospira 1
Sarcina 810 193
Scardovia 9 24 14
Schaalia 530 325 161
Schizothorax 1
Schlegelella 3 2 7
Schleiferia 8
Schlesneria 1
Schumannella 1
Schwartzia 6
Scriptaphyosemion 1
Scytonema 4
Sebaldella 1 29
Sedimentibacter 2 109 310
Sedimenticola 8 3
Sedimentisphaera 3
Sedimentitalea 1
Sediminibacillus 1
Sediminibacterium 1 13
Sediminicola 1
Sediminispirochaeta 1
Sediminitomix 39
Segetibacter 30 41
Segniliparus 17 1
Seinonella 13
Selenihalanaerobacter 36
Selenomonas 23 61 8 300
Sellimonas 1
Seminibacterium 1
Senegalimassilia 229 180 14 4
Seonamhaeicola 3
Septoria 1
Seres 1
Serinibacter 1
Serinicoccus 9 11
Serpentinomonas 2
Serratia 9 69 5 229
Sharpea 13 130
Shewanella 73 204
Shigella 1 177 6
Shimazuella 1 8
Shimia 4
Shimwellia 1
Shinella 6 15 5
Shivajiella 1
Shuttleworthia 262 348 204
Siansivirga 1 3
Siccationidurans 3
Sideroxydans 1
Silanimonas 14
Silene 1
Silicimonas 1
Simalia 1
Simiduia 10 1
Simkania 7 1
Simonsiella 1 3
Simplexvirus 1
Simplicispira 3
Singulisphaera 1 3 5
Sinibacillus 35
Sinobaca 1
Sinobacterium 58
Sinomonas 5 1
Sinorhizobium 1 5
Sinorhizobium fredii group 1 4
Sinorhizobium/Ensifer group 1 12 5
Sinosporangium 5
Siphonobacter 15
Skermanella 1 22 143
Slackia 272 277 19 285
Smithella 7 1
Sneathia 10 43 11
Sneathiella 4
Snodgrassella 1
Snowella 10
Sodalis 4
Soehngenia 1 10
Solimonas 4 1
Solirubrobacter 1 10 5
Solitalea 20 1
Solobacterium 103 70 2 40
Sorangium 2 1 4
Sorex 1
Sphaerimonospora 3
Sphaerobacter 2
Sphaerochaeta 1 4
Sphaerospermopsis 1
Sphaerotilus 2
Sphenostylis 1
Sphingobacterium 4 89 3 311
Sphingobium 8 30 27
Sphingomicrobium 6
Sphingomonas 24 244 14 51
Sphingopyxis 3 11 4
Sphingorhabdus 4 1
Sphingosinicella 1 4
Spiribacter 8 4
Spirilliplanes 2
Spirillum 1 14
Spirochaeta 12 1
Spiroplasma 192 4
Spirosoma 4 5
Spirulina 3
Spodoptera 1
Spongiibacter 1 1
Spongiibacterium 1 1
Spongitalea 1
Sporacetigenium 77
Sporanaerobacter 6 1 5
Sporichthya 7 2
Sporisorium 1
Sporobacter 428 454 11
Sporobacterium 1 300 1 8
Sporobolomyces 1
Sporocytophaga 3
Sporohalobacter 10
Sporolactobacillus 3 76
Sporomusa 101
Sporosalibacterium 27
Sporosarcina 386 23 40
Sporotomaculum 87 170
Stackebrandtia 64 1
Stanieria 1
Staphylococcus 232 121 2 124
Stappia 1
Starria 44
Stella 98
Stenotrophomonas 30 41 37
Stenoxybacter 6
Stereum 1
Steroidobacter 11 2
Sterolibacterium 7 3
Stichodactyla 1
Stigmatella 13 1
Stomatobaculum 18 198 1
Streptacidiphilus 8
Streptobacillus 2 32 3
Streptococcus 832 489 39 342
Streptohalobacillus 3
Streptomonospora 147 1
Streptomyces 97 2 76
Streptosporangium 5 8
Stylosanthes 1
Subdoligranulum 828 477 22 8
Subsaximicrobium 1
Succinatimonas 6 37
Succiniclasticum 38 118 5 18
Succinimonas 36
Succinispira 53
Succinivibrio 9 59 85
Sufflavibacter 1
Sulfitobacter 1 4
Sulfobacillus 17 14
Sulfuricaulis 3
Sulfuricella 1
Sulfuricurvum 3
Sulfuriferula 3
Sulfuriflexus 1
Sulfurifustis 3 1
Sulfurihydrogenibium 1
Sulfurimonas 1 1
Sulfurisoma 2
Sulfuritalea 1
Sulfurivirga 7
Sulfurospirillum 1 13
Sulfurovum 1 1
Sungkyunkwania 1
Sunxiuqinia 27
Sutterella 555 462 30 338
Suttonella 10
Swaminathania 1
Symbiobacterium 8 195
Symploca 6
Synechococcus 4 4
Synergistes 15 4 7
Syntrophaceticus 18
Syntrophobacter 8 3
Syntrophobotulus 7 1
Syntrophococcus 31 291 11
Syntrophomonas 3 185 67
Syntrophorhabdus 16
Syntrophothermus 17 1
Syntrophus 12 3
Taeniopygia 1
Taibaiella 1 28
Tambourissa 1
Tamias 1
Tamilnaduibacter 11
Tamlana 4 1
Tangfeifania 7
Tannerella 11 156 6
Tanticharoenia 1
Taonella 1
Tapinothrix 6
Taraxacum 1
Tardiphaga 1
Tateyamaria 1
Tatumella 4 1
Taylorella 5 1
Telmatocola 1
Telmatospirillum 18 28
Temperatibacter 1
Tenacibaculum 3 40
Tenuibacillus 8
Tepidamorphus 1
Tepidanaerobacter 10 135
Tepidibacillus 32
Tepidibacter 66 90
Tepidimicrobium 173 1 24
Tepidimonas 13 17 3
Terasakiella 1
Terasakiispira 2
Teredinibacter 1
Terrabacter 1
Terracoccus 1
Terribacillus 15 1 5
Terriglobus 4 4
Terrimonas 19
Terrisporobacter 638 406 6 3
Tessaracoccus 24 88 1
Tetragenococcus 2 52 193
Tetrasphaera 10 5
Texcoconibacillus 69
Thalassococcus 3
Thalassolituus 1
Thalassomonas 7
Thalassospira 390 3 71
Thalassotalea 45 1
Thauera 37 48
Thermacetogenium 9 4
Thermaerobacter 19 4
Thermanaeromonas 1 3
Thermanaerothrix Gregoire et al. 2011 1
Thermanaerovibrio 1 1
Thermasporomyces 12
Thermicanus 1 244 253
Thermincola 1 14 3
Thermoactinomyces 99 13
Thermoanaerobacter 15 100
Thermoanaerobacterium 3 61
Thermoanaerobaculum 40
Thermobacillus 5 12
Thermobaculum 48 66
Thermobifida 1
Thermobispora 4 1
Thermoclostridium 106 177
Thermococcus 2
Thermocrinis 3 1
Thermodesulfatator 1 49
Thermodesulfobacterium 1
Thermodesulfobium 6 2 1
Thermodesulforhabdus 20
Thermodesulfovibrio 6 50
Thermoflexibacter 53
Thermogemmatispora 5 20
Thermogutta 12 1
Thermogymnomonas 13
Thermohalobacter 9
Thermohydrogenium 17
Thermoleophilum 19
Thermolithobacter 21
Thermolongibacillus 32
Thermomarinilinea 12
Thermomicrobium 1
Thermomonas 5 1 1
Thermomonospora 3
Thermonema 13
Thermophagus 34
Thermopolyspora 2
Thermosediminibacter 12 1
Thermosinus 1
Thermosipho 3
Thermosporothrix 2
Thermostaphylospora 1
Thermosulfidibacter 2
Thermosynechococcus 1
Thermosyntropha 3
Thermotoga 1
Thermotomaculum 5
Thermovenabulum 16 40
Thermovibrio 1
Thermovirga 3
Thermovorax 1
Thermus 18 46
Theromyzon 1
Thioalbus 1
Thioalkalicoccus 5
Thioalkalimicrobium 1 38 38
Thioalkalispira 5
Thioalkalivibrio 20 43
Thiobacillus 1 21 44
Thiobacter 2
Thiocapsa 41 112
Thioclava 1 1
Thiococcus 1
Thiocystis 24 3
Thiofaba 1
Thiofilum 2
Thioflavicoccus 1
Thiohalobacter 61 1
Thiohalocapsa 46
Thiohalomonas 3
Thiohalophilus 1
Thiohalorhabdus 74 146
Thiohalospira 5
Thiolamprovum 145
Thiolapillus 1
Thiolinea 2
Thiomonas 1 117 96
Thiophaeococcus 6
Thioploca 4
Thioprofundum 5
Thioreductor 3
Thiorhodococcus 8 65
Thiorhodospira 2 7
Thiorhodovibrio 26
Thiothrix 1 42 212
Thiovirga 13 1
Thlaspi 1
Thorsellia 35
Tigriopus 1
Tilapia 1
Tindallia 66 279
Tischeria 1
Tissierella 41
Tistrella 23 1
Tolumonas 3 93
Tolyposporium 1
Tomitella 11