Bacteria reported by various 16s providers

Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

clade

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Bilateria 13 8 1 82
Eumetazoa 13 8 1 91

class

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Protostomia 13 8 1 80
Acidimicrobiia 5 198 51
Acidithiobacillia 23 1
Acidobacteria 128 324 77
Acidobacteria subdivision 23 47
Acidobacteria subdivision 6 1
Acidobacteriia 848 597 38 427
Aconoidasida 1
Actinopteri 1
Agaricomycetes 1
Alphaproteobacteria 478 569 34 423
Amphibia 1 3
Anaerolineae 12 103 200
Anthozoa 1 15
Aquificae 23 7
Arachnida 1
Archaeoglobea 1
Ardenticatenia 10 1
Armatimonadia 1
Arthoniomycetes 1
Aves 1
Babeliae 3
Bacilli 849 600 39 465
Bacteroidetes 851 600 39 467
Balneolia 319 7 35
Betaproteobacteria 806 597 39 460
Bivalvia 1
Blastocatellia 3 87 3
Brocadiae 9
Bryopsida 1
Caldilineae 1 167 150
Caldisericia 1 2
candidate division Termite Group 3 2
Cestoda 1
Chitinispirillia 7
Chitinophagia 9 466 202
Chlamydiia 75 46
Chlorobia 1 44 362
Chloroflexia 3 41 14 2
Chlorophyceae 1
Chromadorea 1
Chrysiogenetes 12 91
Chthonomonadetes 39 4
Clitellata 1
Clostridia 852 600 39 467
Coprothermobacteria 7 31 4
Coriobacteriia 838 598 39 425
Cytophagia 10 509 13 375
Dacrymycetes 1
Deferribacteres 1 59 123
Dehalococcoidia 1 124 66
Deinococci 11 128 13 297
Deltaproteobacteria 683 577 36 449
Diaporthales 1
Dictyoglomi 40 1
Dothideomycetes 1
Echinoidea 1
Ellioviricetes 1
Elusimicrobia 7 58 20 10
Endomicrobia 1
Enopla 1
Epsilonproteobacteria 296 297 10 241
Erysipelotrichia 833 599 39 459
Eurotiomycetes 1
Fibrobacteria 203 124 47
Fimbriimonadia 18 2
Flavobacteriia 501 367 13 378
Florideophyceae 10
Fusobacteriia 171 341 8 243
Gammaproteobacteria 781 599 39 462
Gastropoda 1 32
Gemmatimonadetes 2 35 16 5
Gloeobacteria 7 1
Halobacteria 1
Hemiascomycetes 1 2
Heterobasidiomycetes 1 13
Hexanauplia 1
Holophagae 274 187
Hydrogenophilalia 6 133 171
Ignavibacteria 2 408 16 33
Insecta 13 8 1 55
Insthoviricetes 1
Ktedonobacteria 7 31
Lecanoromycetes 1
Lentisphaeria 301 190 8 7
Liliopsida 1
Limnochordia 1 1
Malasseziomycetes 2
Mammalia 1
Mandibulata 13 8 1 55
Merostomata 1
Methanobacteria 232 156 19 143
Methanomicrobia 20 2 2
Methylacidiphilae 8
Microbotryomycetes 1
Mollicutes 181 521 28 420
Negativicutes 853 599 37 424
Nitriliruptoria 24 211
Nitrososphaeria 1 1
Nitrospinia 2
Nitrospira 2 29 64
Oligoflexia 2 49 13
Oligosphaeria 1 22
Opitutae 108 232 1 257
Pedosphaera 3
Pentapetalae 21 12 2 126
Pezizomycetes 1
Phaeophyceae 1
Phycisphaerae 2 4
Pilidiophora 1
Planctomycetia 3 61 11
Polychaeta 1
Polyplacophora 1
Polypodiopsida 1
Rhabditophora 1
Rhodothermia 6
Rhynchonellata 1
Rubrobacteria 2 52 6
Saprospiria 97 27
Solibacteres 1 7
Spartobacteria 33 15
Sphingobacteriia 22 362 28 433
Spirochaetia 28 87 198
Synergistia 252 234 1 309
Taphrinomycetes 1
Thermococci 1 1
Thermodesulfobacteria 18 53
Thermoleophilia 2 52 7
Thermolithobacteria 33
Thermomicrobia 1 7 1
Thermoplasmata 46 22
Thermoprotei 1 3
Thermotogae 14 30
Tissierellia 558 576 17 124
Trematoda 1
unclassified alpha proteobacteria 3 3
unclassified epsilon proteobacteria 6 3
Ustilaginomycetes 1
Verrucomicrobiae 520 542 28 391

cohort

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zetaproteobacteria 1 17 1
Endopterygota 1 3
Euteleosteomorpha 1
hemipteroid assemblage 13 4 47
Orthopteroidea 8 1 7

family

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Otomorpha 1
Acanthopleuribacteraceae 33
Acaryochloridaceae 3
Acetobacteraceae 7 177 1 138
Acholeplasmataceae 18 387 17 397
Acidaminococcaceae 595 547 23 386
Acidiferrobacteraceae 9 4
Acidimicrobiaceae 192 51
Acidithiobacillaceae 23 1
Acidobacteriaceae 99 104 77
Acidothermaceae 31 1
Actinomycetaceae 689 536 27 368
Actinopolysporaceae 96 104
Adenoviridae 1
Adoxaceae 1
Aerococcaceae 94 489 200
Aeromonadaceae 11 139 5 119
Agathiphagidae 1
Akkermansiaceae 517 530 28 346
Alcaligenaceae 12 113 10 419
Alcanivoracaceae 14 53
Alcidae 1
Algiphilaceae 16
Alicyclobacillaceae 204 8 6
Alteromonadaceae 276 152
Amanitaceae 1
Amaryllidaceae 1
Ambystomatidae 1
Ammodytidae 1
Amoebophilaceae 1 359
Anaerolineaceae 10 102 71
Anaeromyxobacteraceae 354 2
Anaeroplasmataceae 128 235 3 35
anamorphic Clavicipitaceae 1
anamorphic Mycosphaerellaceae 1
anamorphic Ustilaginaceae 1
Anaplasmataceae 22 128
Aphanizomenonaceae 1 276
Aphanothecaceae 3 1
Apiaceae 1
Aplysiidae 1
Aquificaceae 6 6
Araceae 1
Archaeoglobaceae 1
Archangiaceae 43 10
Ardenticatenaceae 10 1
Armatimonadaceae 1
Arthoniaceae 1
Ascarididae 1
Aspergillaceae 1
Asteraceae 1
Atopobiaceae 185 376 12 153
Aurantimonadaceae 1 3 6
Azonexaceae 9 44
Babeliaceae 3
Bacillaceae 256 456 34 401
Bacillales Family X. Incertae Sedis 1 287 420
Bacillidae 5 1 7
bacterial virus 2
Bacteriovoracaceae 2 23 7
Bacteroidaceae 833 599 38 463
Baicaliidae 1
Balneatrichaceae 7
Balneolaceae 315 1 37
bandicoots 1
bark crevice scale insects 13 2
Barnesiellaceae 544 532 13 29
Bartonellaceae 3 23
Bathydraconidae 1
Bdellovibrionaceae 1 4
Beijerinckiaceae 1 8 18
Bernardetiaceae 66 1
Beutenbergiaceae 1
Bifidobacteriaceae 667 593 28 447
Bionectriaceae 1
Blastocatellaceae 3 15
Blastocystidae 2
Blattabacteriaceae 4
Bogoriellaceae 22 6
Borreliaceae 3 13
Bovidae 1
Brachycladiidae 1
Brachyspiraceae 14 24
Braconidae 1
Bradymonadaceae 1
Bradyrhizobiaceae 17 36 21
Brassicaceae 1
Brevibacteriaceae 68 71 36
Brevinemataceae 3
Brucellaceae 29 29 4 37
Bryobacteraceae 8
Budviciaceae 172 5
Burkholderiaceae 41 173 18 368
Burseraceae 1
Cabombaceae 1
Caedimonadaceae 1
Calanidae 1
Caldicoprobacteraceae 254 10
Caldilineaceae 1 165 161
Caldisericaceae 1 1
Calditrichaceae 1 97
Caliciviridae 1
Campanulaceae 1
Campylobacteraceae 295 248 7 183
Candidatus Brocadiaceae 9
Candidatus Desulfofervidaceae 1
Candidatus Midichloriaceae 1 1
Candidatus Nanopelagicaceae 1 3
Candidatus Paracaedibacteraceae 1
Carabidae 1
Cardiobacteriaceae 10 93 10
Carnobacteriaceae 369 308 5 284
Caryophyllaceae 1
Catabacteriaceae 106 109 1 3
Catalimonadaceae 31
Catenulisporaceae 1 4
Caulobacteraceae 17 75 198
Cebidae 1
Celerinatantimonadaceae 6
Cellulomonadaceae 43 27
Cellvibrionaceae 38 6
Centrarchidae 1
Cercopithecidae 1
Cervidae 1
Chamaesiphonaceae 4 3
Chaoboridae 1
Chelatococcaceae 2 2 1
Chelidae 1
Chenopodiaceae 1
Chitinispirillaceae 7
Chitinivibrionaceae 2
Chitinophagaceae 9 466 218
Chlamydiaceae 1 2
Chlamydomonadaceae 1
Chlorobiaceae 44 358
Chlorococcaceae 1
Chloroflexaceae 2 1
Chlorogloeopsidaceae 8
Chordaceae 1
Chordariaceae 1
Christensenellaceae 136 94 25 31
Chromatiaceae 5 304 1 356
Chromobacteriaceae 69 46
Chroococcaceae 1 156
Chroococcidiopsidaceae 2 1
Chrysiogenaceae 12 97
Chrysomelidae 1
Chrysopidae 1
Chthoniobacteraceae 4 15
Chthonomonadaceae 39 4
Cichlidae 1
Clostridiaceae 837 599 39 457
Clostridiales Family XI. Incertae Sedis 229
Clostridiales Family XII. Incertae Sedis 18 322 115
Clostridiales Family XIII. Incertae Sedis 703 551 33 347
Clostridiales Family XVI. Incertae Sedis 19 249
Clostridiales Family XVII. Incertae Sedis 41 24
Clostridiales incertae sedis 742 560 33 376
Coccidae 38
Cochlospermaceae 1
Coelosphaeriaceae 9
Cohaesibacteraceae 1 1
Colchicaceae 1
Coleofasciculaceae 4
Colwelliaceae 107 4
Comamonadaceae 130 114 3 372
Competibacteraceae 98
Conexibacteraceae 1 6 2
Coprothermobacteraceae 7 31 4
Corbulidae 1
Coriobacteriaceae 824 536 36 450
Cortinariaceae 1
Corynebacteriaceae 496 350 10 232
Cottidae 1
Coxiellaceae 2 27 16
Criblamydiaceae 29
Cricetidae 1
Crocinitomicaceae 26 3 1
crown conchs 1
Cryomorphaceae 1 61 1
Cryptococcaceae 13
Cryptomonadaceae 1
Cryptosporangiaceae 1
Culicidae 1
Cuniculitremaceae 1
Curculionidae 1
Cyanobacteriaceae 25 65
Cyanothecaceae 1
Cyclobacteriaceae 160 4
Cyprinidae 1
Cytophagaceae 6 428 4 388
Dacrymycetaceae 1
Dactylopteridae 1
Dasypodidae 1
Deferribacteraceae 1 59 135
Defluviitaleaceae 20 144 3
Dehalococcoidaceae 25 59
Deinococcaceae 10 63 1 215
Delphinidae 1
Demequinaceae 31 3
Dendrocolaptidae 1
Dermabacteraceae 70 47 71
Dermacoccaceae 7 19 5
Dermatophilaceae 1 5 1
Dermocarpellaceae 1
Desulfarculaceae 149 1
Desulfobacteraceae 2 374 2 97
Desulfobulbaceae 59 1 5
Desulfohalobiaceae 30 117
Desulfomicrobiaceae 145 34
Desulfonatronaceae 24 131
Desulfovibrionaceae 681 544 34 434
Desulfurellaceae 5 6
Desulfurobacteriaceae 5 1
Desulfurococcaceae 1
Desulfuromonadaceae 61 224
Diapheromeridae 2
Dictyoglomaceae 40 1
Dictyosteliaceae 1
Dientamoebidae Grasse, 1953 1
Dietziaceae 4 77 21
Dipsadidae 1
Drosophilidae 1
Dunaliellaceae 1
Dysgonamonadaceae 49 391 4 328
Echinidae 1
Echinometridae 1
Ectothiorhodospiraceae 1 133 298
Edwardsiidae 15
Eggerthellaceae 819 583 38 415
Egibacteraceae 1
Egicoccaceae 1
Elassomatidae 1
Elusimicrobiaceae 7 38 8
Emcibacteraceae 67
Emplectonematidae 1
Enchytraeidae 1
Endomicrobiaceae 1
Endozoicomonadaceae 1 1
Enterobacteriaceae 637 388 35 434
Enterococcaceae 158 158 30 410
Entomoplasmataceae 41 206
Eremolepidaceae 1
Eremotheciaceae 2
Ericaceae 1
Erinaceidae 1
Erwiniaceae 188 162 4 121
Erysipelotrichaceae 833 599 39 456
Erythrobacteraceae 3 21 54
Estrildidae 1
Eubacteriaceae 323 599 39 452
Euglenaceae 1
Euphorbiaceae 1
Euzebyaceae 18 206
Fabaceae 12 2 126
Fastidiosibacteraceae 18
Faucheaceae 10
Ferrimonadaceae 32 5
Ferrovaceae 2
Fervidobacteriaceae 12
Fibrobacteraceae 152 118 47
Fimbriimonadaceae 18 2
Flammeovirgaceae 1 224 108
Flavobacteriaceae 497 327 3 374
Fortieaceae 6
Francisellaceae 2 53 24
Frankiaceae 3 4
Fusobacteriaceae 142 293 8 217
Gadidae 1
Gaiellaceae 2 25
Galagidae 1
Gallionellaceae 21 50
Geminicoccaceae 2 21
Gemmataceae 1 8 5
Gemmatimonadaceae 1 18 3
Gentianaceae 1
Geobacteraceae 25 25
Geodermatophilaceae 3 72 9
Geomyidae 1
Glareolidae 1
Gloeobacteraceae 7 1
Glossiphoniidae 1
Glyceridae 1
Glycomycetaceae 81 32
Gnetaceae 1
Gobiidae 1
Gomontiellaceae 50 1
Gomphaceae 1
Gomphosphaeriaceae 11
Gordoniaceae 4 47 13
Gottschalkiaceae 75 4
Gracilibacteraceae 8 263 4
Granulosicoccaceae 40 1
Haematopodidae 1
Haemodoraceae 1
Hafniaceae 14 31 2 21
Hahellaceae 106 49
Halanaerobiaceae 1 117 73
Halieaceae 1 46 1
Haliscomenobacteraceae 54 3
Halobacteriaceae 1
Halobacteriovoraceae 26 7
Halobacteroidaceae 190 29
Haloferacaceae 1
Halomonadaceae 1 279 2 158
Haloplasmataceae 1 12
Halothiobacillaceae 43 4
Hapalosiphonaceae 1
Harpacticidae 1
Helicobacteraceae 4 25 135
Heliobacteriaceae 103 4 196
Herpesviridae 1
Herpetosiphonaceae 4 1
Heteroleibleiniaceae 7
Holophagaceae 247 187
Holosporaceae 5
Hungateiclostridiaceae 153 596 38 393
Hyacinthaceae 1
Hydrocharitaceae 1
Hydrogenophilaceae 5 133 180
Hydrogenothermaceae 10 1
Hyellaceae 1
Hymenobacteraceae 4 106 272
Hyphomicrobiaceae 4 80 208
Hyphomonadaceae 1 309 37
Hypoxidaceae 1
Iamiaceae 3 14
Ichneumonidae 1
Ichthyobacteriaceae 1
Ictaluridae 1
Idiomarinaceae 19 21
Ignavibacteriaceae 1 27 30
Ilumatobacteraceae 48
Immundisolibacteraceae 3
Intrasporangiaceae 3 29 23
Ischnochitonidae 1
Isosphaeraceae 2 5 6
Ixodidae 1
Jiangellaceae 3 10
Jonesiaceae 48 8
Kallotenuaceae 10
Kangiellaceae 23 1
Kiloniellaceae 30 3 100
Kineosporiaceae 1 28 9
Kofleriaceae 1 20 33
Kordiimonadaceae 69
Kosmotogaceae 1 11
Ktedobacteraceae 1
Labilitrichaceae 37
Lachnospiraceae 848 599 39 465
Lactobacillaceae 823 584 30 421
Lampyridae 1
Lanariaceae 1
Laqueidae 1
Lecanoraceae 1
Lecythidaceae 1
Legionellaceae 1 32 265
Lentisphaeraceae 4
Leptolyngbyaceae 2 2 95
Leptospiraceae 23 153
Leptotrichiaceae 53 104 64
Leuconostocaceae 112 546 10 329
Lewinellaceae 7 23
Limnochordaceae 1 1
Limulidae 1
Listeriaceae 1 146 299
Litoricolaceae 26 14
Lonchitidaceae 1
Lorisidae 1
lotus family 1
Lucinidae 1
Macropodidae 1
Magnetococcaceae 9 1
Malasseziaceae 2
Marinifilaceae 147 4
Marinilabiliaceae 1 328 8 1
Mariprofundaceae 1 17 1
mealybugs 3 11
Melioribacteraceae 401 16 4
Merismopediaceae 3
Meruliaceae 1
Mesoaciditogaceae 4
Methanobacteriaceae 232 151 5 138
Methanocorpusculaceae 1 1 2
Methanomassiliicoccaceae 41 22
Methanomethylophilaceae 23
Methanoregulaceae 1
Methanosarcinaceae 1
Methylacidiphilaceae 8
Methylobacteriaceae 9 41 29
Methylococcaceae 1 99 6
Methylocystaceae 1 11 10
Methylophilaceae 155 194
Methylothermaceae 24
Microbacteriaceae 66 332 167
Microbulbiferaceae 7
Micrococcaceae 178 308 27 190
Microcoleaceae 1 179 82
Microcystaceae 1 3
Micromonosporaceae 2 132 143
Micropepsaceae 13
Microscillaceae 68 1
Microthrixaceae 1
mitosporic Nectriaceae 1
mitosporic Venturiaceae 1
Mniaceae 1
moles, shrew-moles, and desmans 1
Monimiaceae 1
Mooreiaceae 4
Moraceae 1
Moraxellaceae 39 276 9 222
Morganellaceae 20 293 18 76
Moritellaceae 1 1
Mrakiaceae 1
Muribaculaceae 4
Mustelidae 1
Mycobacteriaceae 76 48 99
Mycoplasmataceae 17 407 6 352
Mytilidae 1
Myxococcaceae 4 4
Mzabimycetaceae 74
Nakamurellaceae 2 4
Nannocystaceae 14 23
Natranaerobiaceae 21 1
Nautiliaceae 15 4
Neisseriaceae 89 127 12 134
Nereididae 1
nightshade family 13 1
Nitriliruptoraceae 6 3
Nitrosomonadaceae 8 181 5 8
Nitrosopumilaceae 1
Nitrososphaeraceae 1 1
Nitrospinaceae 2
Nitrospiraceae 2 29 64
Nocardiaceae 24 7 50
Nocardioidaceae 4 213 73
Nocardiopsaceae 182 6
noctuid moths 1
Nostocaceae 2 2 366
Nothobranchiidae 1
Nototheniidae 1
Numididae 1
Nymphalidae 1
Oceanospirillaceae 166 103
Odontophoridae 1
Odoribacteraceae 651 556 35 426
Oleiphilaceae 3
Oligosphaeraceae 22
Onagraceae 1
Ophiostomataceae 1
Opitutaceae 1 34 6
Orbaceae 4 4
Orchidaceae 1
Orthomyxoviridae 1
Oscillatoriaceae 58 205
Oscillospiraceae 789 591 38 25
Oxalobacteraceae 277 282 26 276
Paenibacillaceae 3 505 32 348
Paludibacteraceae 1 71 3 8
Papilionidae 1
Papillomaviridae 1
Parachlamydiaceae 3 2
Paridae 1
Parvularculaceae 9 1
Pasteurellaceae 594 492 31 371
Pasteuriaceae 16
Patulibacteraceae 2 1 1
Pectobacteriaceae 3 238 1 28
Pelagibacteraceae 4 1
Peptococcaceae 554 553 26 427
Peptoniphilaceae 551 559 9 394
Peptostreptococcaceae 844 598 33 419
Peribunyaviridae 1
Persicobacteraceae 51 5
Petromyzontidae 1
Petrotogaceae 5 10
Pezizaceae 1
Phaffomycetaceae 1
Phasianidae 1
Phycisphaeraceae 2 1
Phyllobacteriaceae 40 26 12
Picornaviridae 1
Piscirickettsiaceae 2 182 72
Pitheciidae 1
Planctomycetaceae 2 54 6
Planoceridae 1
Planococcaceae 43 498 24 189
Plasmodiidae 1
Platanaceae 1
Pleosporaceae 1
Pleuronectidae 1
Poaceae 1
Polyangiaceae 2 3 24
Polygonaceae 1
Porphyromonadaceae 569 592 38 446
Porticoccaceae 1
Poxviridae 1
Prevotellaceae 622 599 24 438
Prochloraceae 2 5
Prochlorococcaceae 1
Prochlorotrichaceae 3 3
Prolixibacteraceae 82 1
Promicromonosporaceae 22 7
Propionibacteriaceae 144 245 15 30
Prorhynchidae 1
Proteidae 3
Proteinivoraceae 273 308
Psathyrellaceae 1
Pseudanabaenaceae 2 129
Pseudoalteromonadaceae 25 15
Pseudomonadaceae 70 237 11 103
Pseudonocardiaceae 1 161 141
Psychromonadaceae 18 10
Psyllidae 1
Pteromalidae 1
Puniceicoccaceae 7 219 254
Pyrenomonadaceae 1
Pyrodictiaceae 1
Pythonidae 1
Pyxicephalidae 1
Rallidae 1
Ranunculaceae 1
Rarobacteraceae 39
Retroviridae 1
Rhabdochlamydiaceae 41
Rhizobiaceae 18 54 15 116
Rhodanobacteraceae 1 117 263
Rhodobacteraceae 12 155 4 103
Rhodobiaceae 3 6 4
Rhodocyclaceae 76 217 259
Rhodospirillaceae 398 462 26 354
Rhodothalassiaceae 11 4
Rhodothermaceae 86 6 386
Rickettsiaceae 147 253
Rikenellaceae 774 592 38 51
Rivulariaceae 60 218
Rosaceae 1
Roseiarcaceae 3
Roseiflexaceae 1 9 1
rove beetles 3
Rubiaceae 1
Rubricoccaceae 5
Rubritaleaceae 100 123
Rubrobacteraceae 1 30 6
Ruminococcaceae 839 599 39 465
Saccharospirillaceae 216 11
Salicaceae 1
Salinibacteraceae 1
Salinisphaeraceae 13 1
Salinivirgaceae 1
Sandaracinaceae 6 1
Sanguibacteraceae 2 4
Sapindaceae 1
Saprospiraceae 33 25
Sarcoscyphaceae 1
Schleiferiaceae 8
Scincidae 1
Sciuridae 1
Scrophulariaceae 1
Scytonemataceae 2 4
Sedimentisphaeraceae 3
Segniliparaceae 20 1
Selenomonadaceae 117 358 14 384
Shewanellaceae 86 257
Simkaniaceae 7 1
Simmondsiaceae 1
Sinobacteraceae 3 69 303
Sironidae 1
Sneathiellaceae 4
Solibacteraceae 1 1
Solirubrobacteraceae 1 11 4
Soricidae 1
Sphaerobacteraceae 6
Spheniscidae 1
Sphingobacteriaceae 8 362 26 429
Sphingomonadaceae 29 317 14 116
Spirillaceae 1 14
Spirochaetaceae 1 53 105
Spiroplasmataceae 228 4
Spirulinaceae 6
Spongiibacteraceae 119 1
Sporichthyaceae 7 1
Sporidiobolaceae 1
Sporolactobacillaceae 80 108
Sporomusaceae 37 381 290
Staphylococcaceae 235 186 3 346
Stereaceae 1
Sternoptychidae 1
Sterolibacteriaceae 12 48 55
Stichodactylidae 1
Stomiidae 1
Streptococcaceae 837 597 39 453
Streptomycetaceae 119 2 111
Streptosporangiaceae 94 159
Succinivibrionaceae 16 156 105
Sulfolobaceae 2
Sutterellaceae 753 592 39 416
Symbiobacteriaceae 153 248
Synechococcaceae 1 7 129
Synergistaceae 252 234 1 309
Syntrophaceae 40 81
Syntrophobacteraceae 227 169
Syntrophomonadaceae 12 262 350
Syntrophorhabdaceae 1 17
Taeniidae 1
Tannerellaceae 765 591 37 425
Taphrinaceae 1
Temperatibacteraceae 1
Tenrecidae 1
Tephritidae 1
Termitidae 1
Tetranychidae 1
Theaceae 1
Thermaceae 1 50 201
Thermoactinomycetaceae 1 296 236
Thermoanaerobacteraceae 229 174 372
Thermoanaerobacterales Family III. Incertae Sedis 89 1 406
Thermoanaerobacterales Family IV. Incertae Sedis 14
Thermoanaerobaculaceae 47
Thermococcaceae 1 1
Thermodesulfobacteriaceae 18 53
Thermodesulfobiaceae 16 39 6 5
Thermogemmatisporaceae 5 31
Thermoleophilaceae 24
Thermolithobacteraceae 33
Thermomicrobiaceae 1
Thermomonosporaceae 44 117
Thermonemataceae 14
Thermoproteaceae 1
Thermosporotrichaceae 2
Thermotogaceae 1 32
Thermotomaculaceae 7
Thioalkalibacteraceae 1 2
Thioalkalispiraceae 1 39 3
Thiobacillaceae 5 27 56
Thiofilaceae 2
Thiolinaceae 2
Thioprofundaceae 5
Thiotrichaceae 1 59 284
Thorselliaceae 38
Thraupidae 1
Tischeriidae 1
Tissierellaceae 1 179 16
Togaviridae 1
Trichechidae 1
Trichocoleaceae Mai et Johansen (2018) nom. illegit. 2
Trionychidae 1
Trueperaceae 1 11
Trypanosomatidae 1
Tsukamurellaceae 1 3 30
unclassified Enterobacterales 1 10
unclassified Rhodospirillales 6 5
Veillonellaceae 806 593 35 453
Verrucomicrobia subdivision 3 5 3
Verrucomicrobiaceae 238 94 360
Vesicomyidae 1
Vespidae 1
Vibrionaceae 1 65 41
Vicinamibacteraceae 1
Victivallaceae 301 185 8 5
Viviparidae 32
Waddliaceae 3
Wenzhouxiangellaceae 21 1
Woeseiaceae 1
Xanthobacteraceae 2 13 12
Xanthomonadaceae 34 170 349
Yersiniaceae 27 88 7 290
Ziphiidae 1

genus

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zoogloeaceae 2 103 1 103
16SrXII (Stolbur group) 3
Abiotrophia 19 54 20
Absiella 245 272
Acanthopleuribacter 33
Acaryochloris 3
Acer 1
Acetanaerobacterium 130 305 1
Acetatifactor 2 538 1
Acetitomaculum 148 411 1
Acetivibrio 34 477 27
Acetoanaerobium 331 1
Acetobacter 15 6
Acetobacterium 246 411
Acetobacteroides 157
Acetohalobium 1 24
Acetomicrobium 23 7
Acetonema 143
Acholeplasma 7 386 1 302
Achromatium 5
Achromobacter 1 1 9 33
Acidaminobacter 153 105
Acidaminococcus 109 299 4 327
Acidianus 1
Acidibacter 27
Acidicaldus 1
Acidicapsa 42
Acidiferrobacter 5 3
Acidihalobacter 1
Acidimicrobium 45
Acidiphilium 1 1 19
Acidipropionibacterium 2 4
Acidisphaera 1
Aciditerrimonas 84
Acidithiobacillus 23 1
Acidobacterium 4
Acidocella 1
Acidothermus 31 1
Acidovorax 8 18 31
Acinetobacter 32 148 8 86
Acizzia 1
Acrocarpospora 3
Actimicrobium 2
Actinoallomurus 1
Actinoalloteichus 4
Actinobacillus 105 138 8 251
Actinobaculum 20 6 34
Actinocatenispora 54 118
Actinocorallia 4 3
Actinokineospora 3
Actinomadura 22 24
Actinomyces 633 482 11 347
Actinomycetospora 2 2
Actinoplanes 65 10
Actinopolymorpha 1 33
Actinopolyspora 93 104
Actinosynnema 1
Actinotignum 32 47 7
Adenophora 1
Adhaeribacter 14
Adlercreutzia 563 3 324
Advenella 6 3
Aequorivita 7 2 2
Aeribacillus 25 1
Aeriscardovia 90
Aerococcus 19 145 16
Aeromicrobium 2 3 6
Aeromonas 11 94 5 5
Aerosphaera 53
Aestuariispira 250 2
Afipia 1 3
Agaribacter 191
Agarilytica 1
Agarivorans 7 1
Agathiphaga 1
Agathobacter 1
Agathobaculum 1 567 9 11
Aggregatibacter 190 105 2 133
Agmenellum 1
Agreia 2
Agrobacterium 1 14
Agrococcus 3 1 10
Agromyces 42 86
Ahniella 1
Akkermansia 515 530 28 375
Akodon 1
Albidovulum 4 1
Albimonas 2
Alcaligenes 2 7 3
Alcalilimnicola 1
Alcanivorax 6 53
Algibacter 3 1
Algicola 23
Algimonas 8
Algiphilus 16
Algivirga 1
Algorimarina 1
Algoriphagus 69 3
Alicycliphilus 1 1 6
Alicyclobacillus 62 4 5
Aliiarcobacter 1
Aliidiomarina 13
Aliifodinibius 132
Aliihoeflea 1
Aliivibrio 1
Alishewanella 41 78
Alistipes 774 592 35 37
Alkalibacillus 3 27
Alkalibacter 54
Alkalibacterium 5 1 160
Alkalibaculum 116
Alkaliflexus 24 1
Alkalimarinus 7
Alkaliphilus 172 4 417
Alkalispirillum 1
Alkalispirochaeta 1
Alkalitalea 1
Alkanibacter 1
Alkanindiges 1 3
Allisonella 76 108 4
Allium 1
Alloactinosynnema 4
Allobaculum 9 84 46
Allocatelliglobosispora 1
Allochromatium 25
Allofrancisella 5 1
Allofustis 2 5
Allohahella 46 41
Alloiococcus 3 45 3
Allokutzneria 1 1
Alloprevotella 95 266 2 5
Alloscardovia 27 71 30
Alocasia 1
Alphainfluenzavirus 1
Alphavirus 1
Alsobacter 2
Altererythrobacter 3 7 4
Alteribacillus 1
Alternaria 1
Alterococcus 14
Alteromonas 14 4
Altibacter 1
Alysiella 2 4
Amanita 1
Amaricoccus 1 1 15
Amblyomma 1
Ambystoma 1
Ameyamaea 3
Aminicella 302
Aminiphilus 1 46
Aminipila 4
Aminivibrio 25
Aminobacter 1 5
Aminobacterium 8 15
Aminomonas 29 4
Ammonifex 6 137
Ammoniphilus 12 17
Amnibacterium 1
Amphibacillus 17 4
Amphritea 2 13
Amycolatopsis 5 10
Amylibacter 3
Anabaenopsis 1
Anaerobacillus 25 106
Anaerobacter 65
Anaerobacterium 49 19 4
Anaerobiospirillum 13
Anaerobium 173 20
Anaerobranca 264 334
Anaerobutyricum 1 563 33 15
Anaerocella 87
Anaerococcus 407 342 6 188
Anaerocolumna 483 8
Anaerofilum 259 283 8 412
Anaerofustis 212 347 86
Anaeroglobus 22 324
Anaerolinea 4 19 28
Anaeromassilibacillus 10
Anaeromusa 7 64
Anaeromyxobacter 354 2
Anaerophaga 5
Anaeroplasma 49 106 1 33
Anaerorhabdus 12
Anaerosalibacter 130
Anaerosinus 37 10
Anaerosphaera 61
Anaerospora 98 1
Anaerosporobacter 587 336 6
Anaerostipes 822 599 39 412
Anaerotaenia 3
Anaerotignum 555 22 5
Anaerotruncus 769 505 31 419
Anaerovibrio 9 5 1 377
Anaerovorax 285 24 14
Anaplasma 7 1
Anderseniella 4
Andreprevotia 1
Andropogon 1
Aneurinibacillus 1 31 4
Angelakisella 23
Annandia 2
Anopheles 1
Anoxybacillus 4 17 25
Anoxybacter 4
Anoxynatronum 368
Antarctobacter 1
Anthracocystis 1
aphid P-endosymbionts 1 1 4
Apibacter 1
Aplysia 1
Aquabacterium 5 20 2
Aquamicrobium 8
Aquaspirillum 12
Aquibacter 1 6
Aquicella 6
Aquiflexum 7 1
Aquihabitans 10
Aquimarina 7 7
Aquimonas 11 2
Aquincola 1
Aquipuribacter 1 3
Aquisalimonas 28
Aquisphaera 2
Aquitalea 3 6
Arabia 1 1
Arachidicoccus 3
Aramigus 1
Arcanobacterium 34 22 1 16
Archaeoglobus 1
Archangium 4 1
Arcicella 62
Arcobacter 2 9 27
Arcticibacterium 1
Arctostaphylos 1
Ardenticatena 10
Arenibacter 1 5
Arenimonas 23 1
Argyropelecus 1
Arhodomonas 9
Aridibacter 15
Armatimonas 1
Aromatoleum 1
Arsenicicoccus 1 1
Arsenophonus 25 10
Arthothelium 1
Arthrobacter 15 3 1 77
Arthronema 2
Arthrospira 1 1 7
Artocarpus 1
Arum 1
Arundinella 1
Asaccharobacter 11 2
Asaccharospora 102
Asaia 4 1
Asinibacterium 3
Asteroleplasma 73 159 1
Asticcacaulis 1 30 168
Atlantibacter 1
Atopobacter 3
Atopobium 118 217 3 146
Atopococcus 11
Atopostipes 36
Aurantimicrobium 1
Aurantimonas 4
Auraticoccus 3 3
Aureibacter 5
Aureicoccus 1
Aureimonas 1 1 1
Aureispira 1
Aureitalea 3
Auricoccus 1
Auritidibacter 1
Austwickia 1
Avibacterium 38 53
Azoarcus 4 1 30
Azohydromonas 2 5
Azonexus 8
Azorhizobium 1 1
Azorhizophilus 1
Azospira 12 3 1
Azospirillum 2 196 2 84
Azotomonas 1
Bacillus 80 5 29 279
Bacillus altitudinis complex 3
Bacteria 2
Bacterioplanes 1 1
Bacteriovorax 1 15 6
Bacteroides 833 599 38 465
Baia 43
Balneatrix 7
Balneola 112 37
Barnesiella 440 496 5 12
Barrientosiimonas 17
Bartonella 3 23
Basfia 3 1
Basilea 1 1
Batis 1
Bdellovibrio 1 4
Beduini 1
Beggiatoa 1 1
Beijerinckia 2
Belliella 14 3
Bellilinea 2
Belnapia 1 1
Bergeyella 15 7
Bernardetia 48 1
Betainfluenzavirus 1
Betapapillomavirus 1
Beutenbergia 1
Bibersteinia 1 2
Bifidobacterium 653 581 22 446
Bilophila 641 2 33 412
Biostraticola 16
Bisgaardia 39
Bittarella 8
Bizionia 2
Blancoa 1
Blastocatella 3
Blastochloris 6
Blastococcus 1 3
Blastocystis 2
Blastomonas 1
Blastopirellula 12
Blattabacterium 4
Blautia 836 599 39 464
Bogoriella 8
Bombiscardovia 1 3 1
Bordetella 35 4
Borrelia 3 13
Borreliella 4
Bosea 3 5 7
Boseongicola 2
Bowmanella 37
Brachiaria 1
Brachybacterium 15 10 65
Brachymonas 1
Brachyspira 14 24
Bradymonas 1
Bradyrhizobium 12 1 15
Branchiibius 4
Brassicibacter 423 5
Brenneria 233 17
Breoghania 1
Brevefilum 1
Brevibacillus 54 1 47
Brevibacterium 68 71 36
Brevifollis 8
Brevinema 3
Brevundimonas 14 23 16
Brochothrix 6 275
Brockia 13
Brucella 2 1
Bryobacter 3
Bulleidia 4 38 1 81
Burkholderia 2 29 11 129
Burkholderia cepacia complex 7 1 5
Bursatella 1
Bursera 1
Buttiauxella 64 1 1
Butyricicoccus 79 351 37 16
Butyricimonas 478 511 31 352
Butyrivibrio 430 582 30 304
Bythopirellula 5
Caballeronia 14
Cabomba 1
Caedibacter 4
Caenispirillum 13
Caldalkalibacillus 73
Caldanaerobacter 1 56 21
Caldanaerobius 18
Caldanaerovirga 2
Caldicellulosiruptor 36 1 380
Caldicoprobacter 126 10
Caldilinea 6 161
Caldimicrobium 1 1
Caldimonas 12
Caldinitratiruptor 147
Caldisalinibacter 273
Caldisericum 1 1
Calditerrivibrio 3 1
Caldithrix 1 97
Callimico 1
Callithrix 1
Calochaete 6
Calolisianthus 1
Caloramator 1 398 10 409
Caloribacterium 7
Calothrix 60 201
Camarhynchus 1
Camelimonas 2
Camellia 1
Caminibacter 1 1
Caminicella 374 4
Campylobacter 293 242 7 166
Campylotropis 1
Candidatus Amoebophilus 1 359
Candidatus Aquiluna 1
Candidatus Arthromitus 4
Candidatus Atelocyanobacterium 1
Candidatus Azobacteroides 45
Candidatus Babela 2
Candidatus Blochmannia 116
Candidatus Cardinium 1
Candidatus Cloacimonas 1
Candidatus Contubernalis 45
Candidatus Endobugula 27
Candidatus Endolissoclinum 1
Candidatus Glomeribacter 1 180
Candidatus Gullanella 2
Candidatus Hepatoplasma 1
Candidatus Ishikawaella 1
Candidatus Izimaplasma 1
Candidatus Kinetoplastibacterium 4
Candidatus Koribacter 2
Candidatus Microthrix 1
Candidatus Midichloria 1
Candidatus Nitrosoglobus 1
Candidatus Nucleicultrix 1
Candidatus Pelagibacter 4 1
Candidatus Phlomobacter 8
Candidatus Phytoplasma 1 8 359
Candidatus Planktophila 1 2
Candidatus Portiera 1
Candidatus Protochlamydia 2
Candidatus Puniceispirillum 1
Candidatus Regiella 13
Candidatus Rhabdochlamydia 41
Candidatus Saccharimonas 20
Candidatus Scalindua 8
Candidatus Soleaferrea 537 4
Candidatus Solibacter 1
Candidatus Stoquefichus 127 1 2
Candidatus Sulcia 1 3
Candidatus Symbiobacter 1
Candidatus Tammella 193
Candidatus Vidania 1
Candidatus Walczuchella 1
Capnocytophaga 13 13 11
Caproiciproducens 1 31 4
Carboxydocella 19 249
Carboxydothermus 5 4
Carboxylicivirga 167 1
Carcinoscorpius 1
Cardiobacterium 10 81 9
Carnimonas 13
Carnobacterium 10 2 17
Carsonella 1
Casaltella 380 4
Cassena 1
Castellaniella 1
Catabacter 105 109 3
Catellicoccus 1 2
Catenibacterium 306 197 1 149
Catenisphaera 59 2
Catenovulum 1
Catenulispora 1 4
Catonella 11 574 17 355
Caulobacter 4 13 7
Cecembia 12
Cedecea 57
Celeribacter 3
Celerinatantimonas 6
Cellulomonas 43 14
Cellulophaga 4 4
Cellulosibacter 20
Cellulosilyticum 15 557 2 4
Cellulosimicrobium 3
Cellvibrio 16 5
Centipeda 19
Cerasicoccus 124 108
Cereibacter 2
Cesiribacter 22
Cetobacterium 4 21 28
Chamaesiphon 4 3
Chania 11 3
Chelativorans 6 1
Chelatococcus 2 1
Chelonobacter 1 14
Chiayiivirga 2
Chiropotes 1
Chishuiella 5
Chitinilyticum 2
Chitinimonas 13
Chitinispirillum 7
Chitinivibrio 2
Chitinolyticbacter 1
Chitinophaga 21 13
Chlamydia 1 2
Chloracidobacterium 10 3
Chlorobaculum 1 358
Chlorobium 1 1
Chlorococcum 1
Chloroflexus 1
Chlorogloeopsis 8
Chloroherpeton 11 4
Chloromonas 1
Chondrocystis 1
Chondromyces 2 20
Chordaria 1
Christensenella 135 90 17 21
Chromatium 3 111
Chromobacterium 9 36
Chromohalobacter 1
Chroococcidiopsis 2 1
Chroococcus 1 155
Chryseobacterium 11 34 42
Chryseolinea 10 4
Chryseomicrobium 12
Chrysopa 1
Chthoniobacter 4 15
Chthonomonas 39 4
Cichlasoma 1
Cintractia 1
Citreitalea 1
Citricoccus 1 1
Citromicrobium 3
Clarkia 1
Clavibacter 2 4
Cloacibacillus 116 84 29
Cloacibacterium 6 14 4
Clostridiisalibacter 6
Clostridioides 515 59 3 21
Clostridium 818 592 38 457
Cnuella 3
Cobetia 1
Cocleimonas 2
Coenonia 2
Cohaesibacter 1 1
Cohnella 39 184
Coleofasciculus 1
Colidextribacter 1 25
Colinus 1
Collimonas 19 5
Collinsella 809 517 34 372
Colwellia 18 4
Comamonas 31 25 28
Commensalibacter 2
Conchiformibius 1
Conexibacter 6 2
Confluentimicrobium 1
Congregibacter 3
coot 1
Coprinellus 1
Coprobacillus 171 284 5 425
Coprobacter 349 380 11 5
Coprococcus 2 599 33 455
Coprothermobacter 7 31 4
Coptodon 1
Coptothyris 1
Coraliomargarita 34 143
Corallibacter 1
Coriobacterium 12 2 56
Corticibacter 2
Cortinarius 1
Corynebacterium 495 344 9 232
Cottus 1
Coturnix 1
Couchioplanes 7
Couratari 1
Coxiella 13 1
Crambe 1
Cratogeomys 1
Craurococcus 2
Crepis 1
Criblamydia 29
Crinalium 1 1
Croceibacter 6 1
Croceicoccus 1
Cromidon 1
Cronobacter 86 45 4
Cronodrilus 1
Crossiella 1
Cruoricaptor 1 37
Cryobacterium 11 3 1
Cryomorpha 56
Cryptanaerobacter 1
Cryptobacterium 3 187 1
Cryptococcus 13
Cryptomonas 1
Cryptosporangium 1
Cubophis 1
Cucumibacter 2
Culex 1
Culturomica 1
Cupriavidus 2 22 6
Curculigo 1
Curtobacterium 1 4
Curvibacter 10 3 19
Cutibacterium 50 6 6
Cyanobacterium 25 65
Cyanobium 1 3 1
Cyanothece 1
Cyclobacterium 27 4
Cycloclasticus 17 9
Cyclonatronum 3
Cygnodraco 1
Cylindrospermum 1
Cyphomandra 5 1
Cyphophthalmus 1
Cystobacter 26 10
Cytophaga 1 36 1
Dactylopterus 1
Dactylosporangium 4
Damaliscus 1
Danthonia 1
Dasania 12
Dasypus 1
Datura 1
Dechloromonas 1 48
Deefgea 5 1
Deferribacter 16 89
Deferrisoma 16
Defluviicoccus 7
Defluviimonas 3
Defluviitalea 2 114
Defluviitoga 3 1
Dehalobacter 114 5 4
Dehalobacterium 9 176
Dehalococcoides 25 3
Dehalogenimonas 101 61
Deinococcus 10 63 1 215
Delftia 81 5 12
Deltavirus 1
Demequina 30 3
Dendrosporobacter 35
Denitratisoma 1 7 44
Denitrobacter 1
Denitrobacterium 1 7 1
Denitrovibrio 3
Dermabacter 57 37 10
Dermacoccus 1 1 4
Dermatosorus 1
Derxia 23
Desemzia 105 1
Desertibacter 4
Desmospora 5
Desulfacinum 2 24
Desulfallas 16 1
Desulfarculus 93 1
Desulfatibacillum 2 1
Desulfatiferula 14
Desulfatiglans 4
Desulfatirhabdium 1
Desulfatitalea 7
Desulfitibacter 1 41 3
Desulfitispora 23
Desulfitobacterium 1 56 99
Desulfobacca 18 1
Desulfobacter 7 44
Desulfobacterium 196 1
Desulfobacula 3
Desulfobaculum 8
Desulfobotulus 3
Desulfobulbus 46 1
Desulfocapsa 1 1
Desulfocarbo 84
Desulfocella 1 189
Desulfococcus 3 4
Desulfoconvexum 1
Desulfocurvibacter 1
Desulfocurvus 2
Desulfofaba 25
Desulfofarcimen 140 18
Desulfofrigus 24 34
Desulfofundulus 58 59
Desulfofustis 7
Desulfoglaeba 149
Desulfohalobium 3 3
Desulfohalotomaculum 408 51
Desulfohalovibrio 47
Desulfomicrobium 140 34
Desulfomonile 6 77
Desulfonatronobacter 3
Desulfonatronovibrio 5 83
Desulfonatronum 24 131
Desulfonauticus 9 40
Desulfonema 18
Desulfonispora 59
Desulfoplanes 9
Desulforegula 47
Desulforhabdus 1
Desulfosalsimonas 2
Desulfosarcina 19 23
Desulfosoma 80
Desulfosporosinus 1 128 1 210
Desulfotalea 1 2
Desulfothermus 7
Desulfotomaculum 2 463 10 237
Desulfovibrio 405 536 22 363
Desulfovirga 8
Desulfurella 3 6
Desulfuribacillus 5
Desulfurispira 2
Desulfurispirillum 97
Desulfurispora 324 197
Desulfurivibrio 2 1
Desulfurobacterium 4 1
Desulfurococcus 1
Desulfuromonas 36 21
Desulfuromusa 2 209
Dethiobacter 1 8 37
Dethiosulfatibacter 174
Dethiosulfovibrio 53 212
Devosia 1 50 159
Devriesea 1
Dialister 515 523 13 264
Diaphorobacter 1 3 1
Dichelobacter 2
Dichotomicrobium 7
Dickeya 10 1 14
Dictyoglomus 40 1
Dictyostelium 1
Dielma 329 329 9 6
Dientamoeba 1
Dietzia 3 77 21
Dinoroseobacter 1
Diplorickettsia 12
Diplosphaera 8
Dissulfuribacter 7
Dokdonella 9 172
Dokdonia 15 4
Dolichospermum 300
Dolosicoccus 2
Dolosigranulum 4 107
Dongia 118
Dorea 823 594 38 453
Doritaenopsis 1
Draconibacterium 10 1
Drimiopsis 1
Drosophila 1
Dubautia 1
Duganella 1 2
Duncaniella 4
Duodenibacillus 8 1
Dyadobacter 48 138
Dyella 5 2
Dysgonomonas 11 389 4 354
Echinicola 37 4
Echinometra 1
Echinops 1
Ectothiorhodosinus 3
Ectothiorhodospira 17 99
Edaphobacter 50
Edwardsiella 10 35
Effusibacillus 114
Eggerthella 608 464 25 343
Eggerthia 2 190
Egibacter 1
Egicoccus 1
Ehrlichia 9 125
Eikenella 11 6 2
Eionea 1
Eisenbergiella 541 448 25 5
Eisenibacter 68
Ekhidna 1
Elassoma 1
Elizabethkingia 22 6
Elodea 1
Elstera 3
Elusimicrobium 7 38 5
Emcibacter 67
Emergencia 1
Empedobacter 8 1
Emticicia 108 2 315
Enchytraeus 1
Endobacter 1
Endomicrobium 1
Endozoicomonas 1
Enhydrobacter 5
Enorma 81 57 3
Ensifer 1 2 1
Enterobacter 219 34 10 197
Enterococcus 152 111 29 368
Enterorhabdus 283 180 7 6
Enterovibrio 1
Enterovirus 1
Entomoplasma 16 6
Epibacterium 1
Epichloe 1
Epulopiscium 63 4 1
Ercella 166 1
Ereboglobus 3
Eremococcus 22 2
Erinaceus 1
Erwinia 1 106 1 127
Erysipelatoclostridium 797 596 36 22
Erysipelothrix 381 3 356
Erythrobacter 11 50
Erythromicrobium 1
Escherichia 1 53 12 332
Ethanoligenens 488 208
Eubacterium 168 599 39 444
Eucorethra 1
Eudoraea 41
Eudyptes 1
Euglena 1
Euphorbia 1
Euryhalocaulis 7
Euzebya 18 206
Euzebyella 1
Exiguobacterium 24 9
Exserohilum 1
Extensimonas 1
Ezakiella 33 1
Fabibacter 6
Facklamia 56 450 51
Faecalibacterium 814 598 38 461
Faecalibaculum 1
Faecalicatena 362 22
Faecalicoccus 359 4 1
Faecalitalea 64 19 51
Falcatimonas 1 15
Falsiporphyromonas 157
Falsirhodobacter 1
Fangia 14
Fastidiosipila 81 43 2 3
Fenollaria 314 5 3
Fergusonia 1 10
Fermentimonas 4
Ferrimicrobium 2 7
Ferrimonas 31 5
Ferrithrix 90
Ferrovibrio 2
Ferrovum 2
Ferruginibacter 1 43
Fervidicella 6
Fervidobacterium 13
Fibrella 3
Fibrobacter 95 113 47
Fictibacillus 23 4
Ficus 1
Filifactor 2 182 19 124
Filimonas 1 4
Fimbriimonas 18 2
Finegoldia 470 433 6 224
Fischerella 1
Flammeovirga 23 108
Flavaestuariibacter 1
Flavicella 4
Flaviflexus 17 3
Flavihumibacter 3
Flavisolibacter 1 1 8
Flavitalea 1 6
Flavivirga 1
Flavobacterium 423 30 21
Flavonifractor 810 578 33 23
Flectobacillus 58
Flexibacter 1 4 2
Flexistipes 38 1
Flexithrix 10
Flexivirga 1
Flintibacter 26
Fluoribacter 1
Fluviicola 15 3 1
Fluviimonas 230
Fodinibius 2
Fodinicurvata 261 1
Fontibacter 9
Fonticella 2 54
Formosa 5
Fournierella 1 16
Francisella 2 39 24
Franconibacter 8
Frankia 4
Fratercula 1
Frateuria 3 1
Fretibacter 14
Fretibacterium 103 4
Friedmanniella 17 11
Frigoribacterium 1 1
Frischella 2 3
Frondicola 1 1
Fructobacillus 22 29
Fuchsiella 5
Fucophilus 2
Fulvitalea 40
Fulvivirga 55
Fusarium fujikuroi species complex 1
Fusibacter 106 25
Fusicatenibacter 794 592 18 4
Fusobacterium 142 276 6 207
Gabonibacter 10
Gadus 1
Gaetbulibacter 1
Gaiella 2 25
Galago 1
Galenea 25
Gallaecimonas 3
Gallibacterium 1 27 13
Gallicola 75 33 1
Gallionella 18 50
Garciella 7
Gardnerella 44 62 2 26
Garicola 2
Garritya 2
Gelria 228 1
Gemella 185 282 4 391
Geminicoccus 1 21
Geminocystis 1
Gemmata 1 5 5
Gemmatimonas 15 3
Gemmatirosa 3 1
Gemmiger 542 18
Gemmobacter 2 4
Gentiana 1
Geoalkalibacter 1
Geobacillus 6 26 12 157
Geobacter 20 25
Geodermatophilus 6 2
Geofilum 56
Geomicrobium 12
Geopsychrobacter 4
Georgenia 17 6
Geosporobacter 4
Geothermobacter 1
Geothrix 192 187
Geovibrio 1 10
Gibbsiella 4
Giesbergeria 1 2
Gilliamella 1
Gillichthys 1
Gillisia 16 240
Gilvimarinus 1
Gimesia 2
Glaciecola 46 79
Glaciimonas 2
Glaesserella 2 1
Gliocladium 1
Globicatella 2 14
Gloeobacter 7 1
Gloeothece 1
Gloriosa 1
Glossogobius 1
Gluconacetobacter 6 4
Gluconobacter 2 31
Glutamicibacter 42 45
Glycera 1
Glycocaulis 1 1
Glycomyces 8 31
Gorbachella 1 1
Gordonia 4 46 13
Gordonibacter 479 326 26 13
Gottschalkia 75 4
Gracilibacillus 54
Gracilibacter 3 263 3
Gracilimonas 159
Gramella 3 46
Granulibacter 4
Granulicatella 363 61 202
Granulicella 9 22
Granulosicoccus 38 1
Gryllotalpicola 6 1
Guggenheimella 208
Gulbenkiania 3
Guttera 1
Guyparkeria 1 2
Gymnocintractia 1
Gynuella 24 1
Haematobacter 3 3
Haematospirillum 2
Haemophilus 573 457 22 336
Hafnia 14 1 2 1
Hahella 106 49
Halanaerobacter 1 5
Halanaerobaculum 4
Halanaerobium 6 73
Halarsenatibacter 36
Haliangium 1 19 33
Haliea 1 6
Halioglobus 1 1
Haliscomenobacter 46 3
Halobacillus 21 4
Halobacteriovorax 26 7
Halobacteroides 3 1
Halocella 5 4
Halochromatium 115 34
Halodesulfovibrio 5
Haloferax 1
Haloferula 19
Halolactibacillus 4
Halomicronema 1 3
Halomonas 1 254 1 53
Halonatronum 3
Haloplasma 1 12
Halopolyspora 75
Halorhodospira 37 21
Halospina 8
Halospirulina 1
Halotalea 1
Halothermothrix 80 1
Halothiobacillus 22 3
Halyseosphaera 1
Hartmannibacter 1
Hathewaya 313 378
Hazenella 10
Helcococcus 22 87 42
Heleococcum 1
Helicobacter 4 21 135
Heliimonas 7
Heliobacterium 3 1
Heliomonas 1
Heliophilum 6
Heliorestis 7 162
Heliothrix 1
Hellea 7
Hemizonia 1
Henriciella 232
Hephaestia 2
Heratemis 1
Herbaspirillum 266 30 13 169
Herbinix 215 6 4
Herichthys 1
Herminiimonas 109 29
Herpetosiphon 4 1
Hespellia 522 575 16
Hilliella 1
Hippea 2 1
Hirschia 1
Histophilus 4 1
Hoeflea 1
Holdemanella 357 4 204
Holdemania 601 492 23 391
Holophaga 1
Hoppeia 2
Hordeum 1
Howardella 131 404 4
Hoyosella 23
Hugenholtzia 18
Humibacter 13
Hungateiclostridium 2 460 4 384
Hungatella 561 34 18
Hwangdonia 8
Hydatigera 1
Hydnotryopsis 1
Hydrocarboniphaga 1 1 300
Hydrocoleum 7
Hydrogenibacillus 43 5
Hydrogenispora 298
Hydrogenoanaerobacterium 241 492
Hydrogenobacter 2 3
Hydrogenobaculum 4
Hydrogenophaga 1 4 1
Hydrogenophilus 3 122 166
Hydrogenothermus 7
Hydrogenovibrio 14 8
Hydrotalea 1 12
Hylemonella 1
Hymenobacter 3 21 263
Hyperoodon 1
Hyperoplus 1
Hyphomicrobium 2 9 53
Hyphomonas 5 32
Iamia 1 4
Ianmoorea 3
Icaria 1
Ichthyobacterium 1
Ideonella 2 1
Idiomarina 5 21
Ignatzschineria 6 1
Ignavibacterium 27 30
Ignavigranum 2 56
Ihubacter 29
Ileibacterium 3
Ilumatobacter 48
Ilyobacter 4
Immundisolibacter 3
Imperialibacter 16
Imtechella 1
Indibacter 14
Indioceanicola 3
Inquilinus 6 4
Insolitispirillum 133 229
Intestinibacillus 9
Intestinibacter 812 502 21 11
Intestinimonas 760 572 37 20
Iodobacter 6 3
Isochromatium 3
Janibacter 2 2
Jannaschia 1 2
Janthinobacterium 4 14
Jatropha 1
Jatrophihabitans 3 1
Jeotgalibaca 3
Jeotgalibacillus 2
Jeotgalicoccus 2 35 4
Jiangella 1 13
Johnsonella 17 418 415
Jonesia 48 8
Jonquetella 11 64 1
Julidochromis 1
Kaistia 21 10
Kallipyga 55 1
Kallotenue 10
Kandleria 93
Kangiella 22 1
Kappapapillomavirus 1
Kastovskya 3
Keratinibaculum 7
Ketobacter 1
Ketogulonicigenium 2 1
Kiloniella 30 3
Kineococcus 4 2
Kineosporia 4
Kingella 12 4 5
Kistimonas 1
Kitasatospora 6 22
Klebsiella 156 58 8 131
Kluyvera 573 6 5 2
Kockovaella 1
Kocuria 14 18 14
Kohautia 1
Komagataeibacter 22 3
Kordia 1
Kordiimonas 2
Koreibacter 2
Kosakonia 136 14
Kosmotoga 1 11
Kozakia 1 3
Kribbella 161 27
Ktedobacter 1
Kushneria 1 3 90
Kutzneria 1
Kyrpidia 72 1
Kytococcus 2 2
Labilibacter 4
Labilithrix 37
Labrenzia 1
Labrys 2
Laceyella 5 26
Lachnoanaerobaculum 23 580 4
Lachnobacterium 13 425 29 390
Lachnoclostridium 2 598 39 22
Lachnospira 752 555 35 454
Lachnotalea 3
Lacibacter 3 2
Lacibacterium 74
Lacihabitans 6
Lacimicrobium 1
Lacinutrix 1 4
Lactivibrio 2
Lactobacillus 614 581 24 395
Lactococcus 286 325 10 205
Lactonifactor 500 416 29 2
Lactovum 137
Lacunisphaera 3
Lagierella 1
Lampetra 1
Lamprocystis 2
Laribacter 3 3
Larkinella 1
Lautropia 20 25 28
Lawsonella 1
Lawsonia 339 6
Lebetimonas 8
Lecanora 1
Leclercia 1
Legionella 1 32 265
Leifsonia 2 1 1
Leishmania 1
Leisingera 1
Lelliottia 1 128
Leminorella 4 1
Lentibacillus 28 60
Lentisphaera 4
Lentivirus 1
Lentzea 3
Lepidocolaptes 1
Lepidozona 1
Leptofauchea 10
Leptolinea 54
Leptolyngbya 2 1 103
Leptonema 10
Leptospira 10 153
Leptospirillum 13 1
Leptothrix 75
Leptotrichia 43 28 27
Leucobacter 20 9
Leucocintractia 1
Leuconostoc 86 430 4 213
Leucothrix 4 6
Levilinea 1
Levinea Young et al. 1971 61 17 19 89
Levyella 234 1
Lewinella 7 24
Libanicoccus 1 1
Liberibacter 2 6 31
Limibacillus 14
Limibacter 1
Limimaricola 1
Limimonas 3
Limisphaera 5
Limnobacter 1 22 291
Limnobaculum 1
Limnochorda 1 1
Limnohabitans 2 5
Limnoraphis 3
Lishizhenia 2
Listeria 1 144 73
Litoribacillus 47
Litoribacter 12
Litoribrevibacter 6
Litoricola 26 14
Litorilinea 7
Litorilituus 40 4
Loktanella 5 1
Lonchitis 1
Longilinea 3 2
Longimonas 37
Lucinoma 1
Ludwigia 1
Luminiphilus 37
Luna cluster 1 1 3
Lunatimonas 2
Lupinus 1
Luteibacter 1 33 231
Luteibaculum 1
Luteimonas 8 9
Luteipulveratus 1
Luteitalea 1
Luteivirga 4
Luteococcus 10
Luteolibacter 1 18 181
Lutibacter 1 19 4
Lutibaculum 1
Lutispora 140 1
Lutra 1
Lysinibacillus 9 12 62
Lysinimonas 1
Lysobacter 2 46 87
MAC 3
Macaca 1
Macrococcus 1 8 187
Macropus 1
Madoqua 1
Mageeibacillus 1
Magnetococcus 9 1
Magnetospira 3 1
Magnetospirillum 4 3
Magnetovibrio 3
Mahella 14
Malassezia 2
Maledivibacter 22
Mangrovibacter 1
Mangroviflexus 2
Mannheimia 8 54 173
Maribacter 1 5
Maricaulis 15 3
Marichromatium 1 10 67
Marinicauda 1
Marinicella 8
Marinifilum 147
Mariniflexile 3 4
Marinilabilia 32 1
Marinilactibacillus 4
Marinimicrobium 1 1
Marininema 2
Mariniphaga 16
Mariniradius 8
Marinitalea Kim et al. 2011 1
Marinithermofilum 2
Marinithermus 2
Marinitoga 2 11
Marinobacter 95 25
Marinobacterium 20 4
Marinococcus 4 25
Marinomonas 20 7
Marinoscillum 23
Marinospirillum 33 78
Marinovum 1
Mariprofundus 17 1
Marispirillum 46
Maritalea 1
Maritimibacter Lee et al. 2007 emend. Zhong et al. 2015 1
Marivirga 2 1
Marivita 1 2
Marivivens 1
Marixanthomonas 17
Marmoricola 11 1
Marseillibacter 1 36
Martelella 1 2
Marvinbryantia 634 524 3 11
Massilia 7 14 20 4
Massilioclostridium 1 24
Massiliprevotella 3
Mastadenovirus 1
Mechercharimyces 10 2
Mediterranea 3
Megamonas 69 172 2 76
Meganema 16
Megasphaera 564 370 390
Meiothermus 1 21 169
Meiracyllium 1
Melaminivora 1
Melanochromis 1
Melghiribacillus 3
Melghirimyces 25
Melioribacter 401 11 4
Melissococcus 2 21
Melittangium 5 1
Meniscus 24
Merdibacter 1 7
Merdimonas 1 1
Mesoaciditoga 4
Mesoflavibacter 1
Mesonia 7 1
Mesoplasma 14 206
Mesorhizobium 10 8 7
Mesotoga 1
Metabacterium 1 2
Metakosakonia 2 1
Metallibacterium 1
Metallosphaera 1
Metaprevotella 3
Metarhizium 1
Methanimicrococcus 1
Methanobrevibacter 228 144 4 130
Methanocorpusculum 1 1 2
Methanolinea 1
Methanomassiliicoccus 26 22
Methanomethylophilus 23
Methanosphaera 40 22 2 36
Methylacidimicrobium van Teeseling et al. 2014 1
Methylarcula 16
Methylibium 6
Methylobacillus 56 191
Methylobacter 7
Methylobacterium 9 20 27
Methylocaldum 2 4
Methyloceanibacter 1
Methylocella 6 17
Methylococcus 1
Methylocystis 5 2
Methylogaea 1 34
Methyloglobulus 40
Methylohalobius 13
Methylohalomonas 5
Methylokorus 3
Methyloligella 2
Methylomagnum 3
Methylomarinovum 10
Methylomicrobium 4 3
Methylomonas 7 4
Methylomusa 4
Methylonatrum 3 240
Methyloparacoccus 2
Methylophaga 101 10
Methylophilus 17
Methylorubrum 4
Methylosinus 8
Methylosoma 1
Methylosphaera 4
Methylotenera 56 3
Methylothermus 1
Methyloversatilis 35 18
Methylovulum 1
Micavibrio 3
Microaerobacter 15
Microbacter 121
Microbacterium 11 150 86
Microbaicalia 1
Microbulbifer 7
Microcerotermes 1
Microchaete 3
Micrococcus 10 2 7
Microcoleus 61
Microcystis 1 3
Microlunatus 27 2
Micromonospora 5 25
Micropruina 1 1
Microscilla 1
Microterricola 4
Microtetraspora 4 4
Microvirga 1 7 3
Microvirgula 2
Microvirus 2
Millisia 1
Miniimonas 1
Mitsuaria 3
Mitsuokella 18 53 3 189
Mixta 1
Mizugakiibacter 15
Mobilitalea 68 2
Mobiluncus 127 192 2 47
Modestobacter 2 64 3
Mogibacterium 526 428 1 364
Moheibacter 12
Molineria 1
Mongoliicoccus 9
Mongoliitalea 1
Monoglobus 4
Moorea 41 4
Mooreia 4
Moorella 23 329
Moraxella 14 161 11
Mordavella 1 6 4
Morganella 4 120 1 54
Moritella 1 1
Moryella 698 449 4 69
Mucilaginibacter 25 5 4
Mucinivorans 31 1
Mucispirillum 3 2
Murdochiella 245 1 4
Muribaculum 4
Muricauda 2 14
Muriicola 1
Murimonas 553 3
Myceligenerans 12
Mycetohabitans 9
Mycobacterium 33 25 99
Mycobacterium chelonae complex 3
Mycobacterium complex 3
Mycobacterium terrae complex 4
Mycolicibacterium 1 12 10
Mycoplana 1
Mycoplasma 10 398 1 350
Myroides 12 10
Mytilus 1
Myxococcus 1 1
Nafulsella 10
Nakamurella 2 4
Nannocystis 11 23
Nanoscypha 1
Nardonella 1
Natranaerobaculum 3
Natranaerobius 17 1
Natranaerovirga 372 7
Natribacillus 1
Natroniella 2
Natronincola 52 351
Naumannella 8
Nautilia 5 1
Ndongobacter 1
Necropsobacter 9
Negativibacillus 1 29 3
Negativicoccus 132 165 172
Neglecta 1
Neisseria 82 38 12 93
Nelumbo 1
Neoasaia 1
Neochlamydia 1
Neorhizobium 4
Neorickettsia 1 6
Neoscardovia 45
Neptuniibacter 2
Neptunomonas 1 1
Nereis 1
Nesterenkonia 62 9
Nevskia 1 3 14
Niabella 1 432 92
Niastella 1 3 3
Nibribacter 42
Nicoletella 4
Nigella 1
Nisaea 25
Nitratifractor 2
Nitratireductor 4
Nitratiruptor 1 1
Nitriliruptor 6 3
Nitrincola 1 1
Nitrobacter 4 1
Nitrococcus 18
Nitrolancea 4
Nitrosococcus 1 17 54
Nitrosomonas 2 175 5 3
Nitrosopumilus 1
Nitrososphaera 1 1
Nitrosospira 1 3 3
Nitrosovibrio 2
Nitrospina 2
Nitrospira 1 8 2
Nitrospirillum 4 1
Niveispirillum 128 1
Nocardia 4 7
Nocardioides 3 68 4
Nocardiopsis 23 6
Nodularia 1 51
Nonomuraea 15 67
Norovirus 1
Nosocomiicoccus 6
Nostoc 1 147
Novibacillus 8 4
Noviherbaspirillum 13
Novispirillum 73 253
Novosphingobium 7 21 16
Oblitimonas 1
Oceanibaculum 2
Oceanicaulis 3 3
Oceanicoccus 31 1
Oceanimonas 4 1
Oceanirhabdus 7
Oceanisphaera 2 4
Oceanithermus 1
Oceanobacillus 16 4
Oceanobacter 1
Oceanospirillum 56 5
Oceanotoga 1
Ochrobactrum 28 3 31
Octadecabacter 3 6
Odoribacter 619 482 33 405
Oenococcus 49 86
Oerskovia 1
Ohtaekwangia 50
Okeania 1
Oleibacter 3
Oleiphilus 3
Oleispira 2
Oleomonas 28
Oligella 8 16 19
Oligosphaera 22
Oligotropha 1
Olivibacter 7 306
Olleya 4
Olsenella 64 303 9 39
Opitutus 1 13 6
Orbus 2
Orenia 30
Oreochromis 1
Oribacterium 41 588 28 379
Orientia 63 1
Ornatilinea 4
Ornithinicoccus 1 2
Ornithinimicrobium 4
Ornithobacterium 3 4
Orrella 1
Orthobunyavirus 1
Orthopoxvirus 1
Oscillatoria 1 112
Oscillibacter 740 591 38 25
Oscillospira 618 2 32 437
Osmadenia 1
Otariodibacter 14
Ottowia 3
Owenweeksia 1 1
Oxalicibacterium 65
Oxalobacter 176 8 196
Oxalophagus 1 27
Oxobacter 5 137
Oxybasis 1
Oxynema 3
Pachytichospora 2
Paenalcaligenes 1 1
Paenarthrobacter 1 1
Paenibacillus 1 478 13 153
Paeniclostridium 67 4
Paeniglutamicibacter 1
Paenisporosarcina 48 8
Pagothenia 1
Palicourea 1
Paludibacter 72 3 8
Paludibacterium 3
Paludibaculum 6
Paludisphaera 3
Pamelaescincus 1
Panacagrimonas 2
Pandoraea 13 5
Pannonibacter 4
Panonychus 1
Pantoea 187 88 1 12
Papilio 1
Papillibacter 418 297 29
Parabacteroides 757 593 37 461
Paraburkholderia 48 1 107
Parachlamydia 2 1
Paraclostridium 23
Paracoccus 1 20 24
Paraeggerthella 15 59
Paraferrimonas 1
Parafilimonas 31
Parageobacillus 5 25
Paraglaciecola 6 1
Paraliobacillus 3
Parapanteles 1
Parapedobacter 14 131
Paraperlucidibaca 1
Paraphotobacterium 1
Paraprevotella 209 505 8 340
Pararheinheimera 7 1
Pararhodospirillum 1 1
Parasaccharibacter 6 1
Parascardovia 4 3 111
Parascaris 1
Parasegetibacter 2
Parashewanella 2 1
Parasporobacterium 171 238 17
Parasutterella 591 556 24 14
Parechinus 1
Parolsenella 1
Parvibacter 94 32 1
Parvibaculum 1
Parvimonas 96 118 6
Parvularcula 9 1
Pasteurella 20 16 42
Pasteuria 16
Patulibacter 2 1 1
Paucibacter 2 12
Paucimonas 2
Pectinatus 106 1 340
Pectobacterium 3 39 4
Pediococcus 34 69 262
Pedobacter 4 187 23 415
Pedomicrobium 1 2 18
Pelagibaca 1
Pelagibacterium 1
Pelagibius 2
Pelagicoccus 39 123
Pelistega 1 3
Pelobacter 22 14
Pelodictyon 1
Pelodiscus 1
Pelolinea 4 1
Pelomonas 20 11 4
Pelosinus 150 4
Pelospora 27
Pelotomaculum 63 153
Pelvicachromis 1
Penicillium 1
Peptoanaerobacter 23
Peptoclostridium 664 93 1
Peptococcus 405 236 5 410
Peptoniphilus 437 479 6 412
Peptostreptococcus 205 250 2 123
Perameles 1
Peredibacter 8
Perexilibacter 29
Perlucidibaca 3
Permianibacter 24
Perodicticus 1
Persephonella 1
Persicaria 1
Persicirhabdus 11
Persicitalea 38
Persicobacter 7 5
Petrimonas 15 4
Petrotoga 4
Petunia 1
Phaeobacter 16
Phaeobacterium 6
Phaeochromatium 8
Phaeocystidibacter 7
Phaeodactylibacter 8
Phaffomyces 1
Phascolarctobacterium 550 509 19 411
Phaseolibacter 2
Phenylobacterium 2 14 21
Phlebia 1
Phocaeicola 1 143
Phocea 11
Phoenicibacter 1
Phormidium 2
Photobacterium 1 17 6
Photorhabdus 70 4
Phreatobacter 1 1
Phycicoccus 1
Phycisphaera 2 1
Phyllobacterium 30 1
Phytoactinopolyspora 2
Phytomonospora 31
Pigmentiphaga 24
Pilibacter 16
Pilimelia 1 12
Pimelobacter 3
Pirellula 13 2
Pisciglobus 15
Piscinibacter 5
Piscirickettsia 9 1
Plagiomnium 1
Planctomyces 1 4
Planctopirus 1 2
plane trees 1
Planifilum 1 16 228
Planktomarina 2
Planktothrix 1 3
Planococcus 65 66
Planomicrobium 39 3 12
Plantactinospora 1 1
Plantibacter 1 1
Plasmodium 1
Plasticicumulans 98
Pleionea 1
Pleomorphomonas 6 2
Plesiocystis 3
Pleurocapsa 1
Pleuronectes 1
Pluralibacter 22 12
Polaribacter 1 10
Polaromonas 2 8
Polycladomyces 22
Polymorphobacter 2
Polymorphum 3
Polynucleobacter 2 74
Pontibaca 2
Pontibacillus 94 95
Pontibacter 1 12 159
Ponticaulis 2
Pontivivens 1
Populus 1
Porphyrobacter 1 2 1
Porphyromonas 364 484 16 381
Portibacter 2
Porticoccus 1
Povalibacter 1
Pragia 168 4
Prauserella 2
Prevotella 477 598 23 437
Prochlorococcus 2 5
Prochlorothrix 2
Prognathochromis 1
Prolixibacter 3
Promicromonospora 1 1
Propionibacterium 122 16 12 16
Propionicimonas 1 2
Propioniferax 3 109
Propionigenium 3 19
Propionimicrobium 11
Propionispira 2 21
Propionispora 43 301
Propionivibrio 2 29 29
Prosthecobacter 17 70
Prosthecochloris 1 4
Proteiniborus 133
Proteiniclasticum 1
Proteiniphilum 40 15 4
Proteinivorax 55
Proteocatella 104 3
Proteus 17 96 17 21
Providencia 132 27
Prunus 1
Psathyrostachys 1
Pseudacidovorax 2
Pseudaeromonas 29
Pseudaminobacter 2
Pseudanabaena 4
Pseudarcicella 36 1
Pseudarthrobacter 1
Pseudescherichia 19
Pseudoalteromonas 15
Pseudobacteroides 8
Pseudobutyrivibrio 828 355 27 414
Pseudocentrotus 1
Pseudochrobactrum 1 14 6
Pseudoclavibacter 52 236 16
Pseudoclostridium 4 322
Pseudodesulfovibrio 64 4
Pseudoduganella 6
Pseudoflavitalea 4
Pseudoflavonifractor 499 496 31 17
Pseudofulvibacter 1
Pseudoglutamicibacter 12 2 2
Pseudogulbenkiania 1
Pseudohongiella 6 2
Pseudokineococcus 12
Pseudolabrys 1
pseudomallei group 4
Pseudomaricurvus 2
Pseudomonas 69 226 7 103
Pseudomonas chlororaphis group 18
Pseudonocardia 19 18
Pseudooceanicola 1
Pseudopedobacter 138 1 1
Pseudopropionibacterium 6 3
Pseudoramibacter 3 68 190
Pseudorhodobacter 60
Pseudorhodoferax 1
Pseudorhodoplanes 1
Pseudoscardovia 366
Pseudoscillatoria 256
Pseudospirillum 1
Pseudothermotoga 4
Pseudovibrio 2 1
Pseudoxanthobacter 5
Pseudoxanthomonas 6 23 6
Pseudozyma 1
Psychrilyobacter 13
Psychrobacter 2 84 177
Psychroflexus 24 38
Psychromicrobium 1
Psychromonas 18 10
Psychroserpens 2 5
Psychrosinus 11
Psychrosphaera 2
Pullulanibacillus 63
Puniceicoccus 67 37
Pusillimonas 3 1
Pustulibacterium 1
Pylodictis 1
Pyramidobacter 51 21 4
Pyrenomonas 1
Pyrinomonas 24
Pyrobaculum 1
Pyrocoelia 1
Pyrodictium 1
Pyxidicoccus 3
Qipengyuania 1
Quadrisphaera 1
Quasibacillus 15
Raffaelea 1
Rahnella 12 1
Ralstonia 15 11 26
Ramaria 1
Ramlibacter 3 2
Rangifer 1
Raoultella 31 1 5
Raoultibacter 11
Raphidiopsis 3
Rapidithrix 6
Rarobacter 39
Rathayibacter 2 1 2
Rehaibacterium 2
Reichenbachiella 9
Reinekea 106 1
Renibacterium 1
Renobacter 4
Reyranella 6
Rhabdochromatium 9
Rheinheimera 4 53 7
Rhizobacter 10
Rhizobium 13 27 5 6
Rhizomicrobium 13
Rhodanobacter 40 1
Rhodobaca 1
Rhodobacter 4 3 26
Rhodobium 1
Rhodococcus 24 3 81
Rhodocyclus 1
Rhodocytophaga 1 31
Rhodoferax 3 30
Rhodoluna 3
Rhodomicrobium 3 1
Rhodonellum 28
Rhodopila 1
Rhodopirellula 1 1
Rhodoplanes 1 1 21
Rhodopseudomonas 5 18 4
Rhodospira 5
Rhodospirillum 1 2 206
Rhodosporidiobolus 1
Rhodothalassium 11 4
Rhodothermus 5 380
Rhodovibrio 20 89
Rhodovulum 3 28 5
Rickettsia 105 253
Rickettsiella 16
Riemerella 3 3
Rikenella 2 3 12
Risungbinella 21
Rivibacter 1
Rivicola 6
Rivularia 37
Robbsia 8
Robiginitalea 1 1
Robiginitomaculum 7
Robinsoniella 181 456 33
Rodentibacter 20 9
Romboutsia 547 526 3 2
Roseateles 3 1
Roseburia 832 599 39 459
Roseiarcus 3
Roseibacterium 1 1
Roseiflexus 8 1
Roseimarinus 10
Roseimicrobium 20
Roseitalea 1
Roseivirga 29
Roseivivax 2
Rosenbergiella 121
Roseobacter 4
Roseococcus 1 7 9
Roseomonas 4 9 46
Roseospira 6 73
Roseovarius 1 4 3
Rothia 157 11 2 266
Rubellimicrobium 3 11 4
Rubidibacter 2
Rubidimonas 32
Rubinisphaera 3
Rubribacterium 1
Rubritalea 100 133
Rubritepida 1
Rubrivivax 2 2
Rubrobacter 1 30 6
Rudaea 4
Rudanella 6
Ruegeria 2 1
Rufibacter 27 4
Ruminiclostridium 34 587 38 180
Ruminobacter 41 5
Ruminococcus 2 599 39 461
Rummeliibacillus 1 29 2
Runella 45 151
Ruthenibacterium 1 33 6
Saccharibacillus 17
Saccharibacter 11
Saccharicrinis 36
Saccharofermentans 96 2
Saccharomonospora 123 3
Saccharophagus 1
Saccharopolyspora 38 118
Saccharospirillum 10
Saccharothrix 1 1
Sagittula 1
Saguinus 1
Salegentibacter 4
Salibacterium 5
Salimicrobium 16 3
Salinibacillus 15
Salinibacter 1
Salinibacterium 2
Salinicoccus 53 218
Salinicola 1 1
Salinimicrobium 1 3
Salinimonas 4
Salinisphaera 13 1
Salinispira 4
Salinispirillum 127
Salinispora 2
Salinivenus 1
Salinivibrio 21 13
Salinivirga 1
Salipiger 1
Salisaeta 48 92
Salmonella 4 9 20 58
Sambucus 1
Sandaracinobacter 2
Sandaracinus 6 1
Sanguibacter 2 4
Sapovirus 1
Saprospira 1
Sarcina 805 1 263
Scardovia 9 30 19
Schaalia 528 385 205
Schizothorax 1
Schlegelella 3 5 12
Schleiferia 8
Schlesneria 1
Schumannella 1
Schwartzia 11
Scriptaphyosemion 1
Scytonema 4
Sebaldella 1 32
Sedimentibacter 2 121 412
Sedimenticola 8 3
Sedimentisphaera 3
Sedimentitalea 1
Sediminibacillus 2
Sediminibacterium 1 13
Sediminicola 1
Sediminispirochaeta 1
Sediminitomix 43
Segetibacter 30 49
Segniliparus 20 1
Seinonella 16
Selenihalanaerobacter 46
Selenomonas 23 82 8 402
Sellimonas 1
Seminibacterium 1
Senegalimassilia 228 206 14 8
Seohaeicola 3
Seonamhaeicola 3
Septoria 1
Seres 1
Serinicoccus 11 14
Serpentinomonas 2
Serratia 9 74 5 305
Sharpea 18 176
Shewanella 86 257
Shigella 1 202 8
Shimazuella 1 6
Shimia 3
Shimwellia 1
Shinella 6 6 5
Shivajiella 2
Shuttleworthia 258 408 254
Siansivirga 1 3
Siccationidurans 4
Sideroxydans 1
Silanimonas 17
Silene 1
Silicimonas 1
Simalia 1
Simiduia 10 1
Simkania 7 1
Simonsiella 1 3
Simplexvirus 1
Simplicispira 1 3
Singulisphaera 1 3 5
Sinibacillus 37
Sinobaca 1
Sinobacterium 69
Sinomonas 6 1
Sinorhizobium 1 5
Sinorhizobium fredii group 1 4
Sinorhizobium/Ensifer group 1 3 5
Sinosporangium 8
Siphonobacter 24
Skermanella 1 39 172
Slackia 268 340 19 368
Smithella 7 2
Sneathia 10 53 21
Sneathiella 4
Snodgrassella 1 1
Snowella 11
Sodalis 7
Soehngenia 1 15
Solimonas 4 1
Solirubrobacter 1 11 4
Solitalea 21 1
Solobacterium 104 91 2 56
Sorangium 2 1 4
Sorex 1
Spelaeicoccus 7
Sphaerimonospora 3
Sphaerobacter 2
Sphaerochaeta 1 4
Sphaerospermopsis 1
Sphaerotilus 2
Sphenostylis 1
Sphingobacterium 4 102 3 409
Sphingobium 8 32 39
Sphingomicrobium 6
Sphingomonas 24 289 14 66
Sphingopyxis 3 13 3
Sphingorhabdus 4 1
Sphingosinicella 2 4
Spiribacter 10 4
Spirilliplanes 2
Spirillum 1 14
Spirochaeta 12 1
Spiroplasma 228 4
Spirosoma 4 5
Spirulina 5
Spodoptera 1
Spongiibacter 1 1
Spongiibacterium 1 1
Spongitalea 1
Sporacetigenium 89
Sporanaerobacter 6 1 5
Sporichthya 7 1
Sporisorium 1
Sporobacter 428 542 11 2
Sporobacterium 1 364 1 10
Sporobolomyces 1
Sporocytophaga 3
Sporohalobacter 12
Sporolactobacillus 3 108
Sporomusa 129
Sporosalibacterium 34
Sporosarcina 468 23 46
Sporotomaculum 97 202
Stackebrandtia 75 1
Stanieria 1
Staphylococcus 233 134 2 156
Stappia 1
Starria 48
Stella 127
Stenotrophomonas 29 35 47
Stenoxybacter 7
Stereum 1
Steroidobacter 15 2
Sterolibacterium 7 3
Stichodactyla 1
Stigmatella 14 1
Stomatobaculum 18 227 3
Streptacidiphilus 8
Streptobacillus 2 37 3
Streptococcus 827 591 39 454
Streptohalobacillus 3
Streptomonospora 172 1
Streptomyces 117 2 82
Streptosporangium 7 8
Stylosanthes 1
Subdoligranulum 823 577 22 19
Subsaximicrobium 1
Succinatimonas 6 38
Succiniclasticum 38 135 5 21
Succinimonas 41
Succinispira 61
Succinivibrio 9 77 101
Sufflavibacter 1
Sulfitobacter 1 4
Sulfobacillus 18 20
Sulfuricaulis 3
Sulfuricella 1
Sulfuricurvum 3 3
Sulfuriferula 3
Sulfuriflexus 1
Sulfurifustis 4 1
Sulfurihydrogenibium 1
Sulfurimonas 1 1
Sulfurisoma 3
Sulfuritalea 1
Sulfurivirga 14
Sulfurospirillum 2 12
Sulfurovum 1 1
Sungkyunkwania 1
Sunxiuqinia 31
Sutterella 549 549 30 443
Suttonella 10
Swaminathania 1
Symbiobacterium 12 248
Symploca 6
Synechococcus 4 4
Synergistes 15 4 11
Syntrophaceticus 20
Syntrophobacter 9 3
Syntrophobotulus 9 1
Syntrophococcus 31 344 11 2
Syntrophomonas 3 227 89
Syntrophorhabdus 17
Syntrophothermus 21 1
Syntrophus 12 3
Taeniopygia 1
Taibaiella 1 29
Tambourissa 1
Tamias 1
Tamilnaduibacter 11
Tamlana 3 1
Tangfeifania 10
Tannerella 11 193 9
Tanticharoenia 1
Taonella 1
Tapinothrix 7
Taraxacum 1
Tardiphaga 1
Tateyamaria 1
Tatumella 5 1
Taylorella 5 1
Telmatocola 1
Telmatospirillum 19 25
Temperatibacter 1
Tenacibaculum 3 38
Tenuibacillus 8
Tepidamorphus 1
Tepidanaerobacter 10 159
Tepidibacillus 38
Tepidibacter 61 128
Tepidimicrobium 194 1 25
Tepidimonas 12 17 3
Tepidiphilus 1
Terasakiella 1
Terasakiispira 2
Teredinibacter 1 1
Terrabacter 1
Terracoccus 1
Terribacillus 16 1 4
Terriglobus 4 4
Terrimicrobium 3
Terrimonas 19
Terrisporobacter 634 482 6 6
Tessaracoccus 25 109 1
Tetragenococcus 2 59 254
Tetrasphaera 12 8
Texcoconibacillus 75
Thalassobius 3
Thalassococcus 3
Thalassolituus 1
Thalassomonas 8
Thalassospira 384 5 101
Thalassotalea 50 1
Thauera 48 62
Thermacetogenium 9 4
Thermaerobacter 22 4
Thermanaeromonas 1 3
Thermanaerothrix Gregoire et al. 2011 1
Thermanaerovibrio 2 1
Thermasporomyces 13
Thermicanus 1 287 343
Thermincola 1 17 3
Thermoactinomyces 135 11
Thermoanaerobacter 17 118
Thermoanaerobacterium 3 63
Thermoanaerobaculum 47
Thermobacillus 7 13
Thermobaculum 57 81
Thermobifida 1
Thermobispora 8 1
Thermoclostridium 126 221
Thermococcus 1
Thermocrinis 4 1
Thermodesulfatator 1 53
Thermodesulfobacterium 1
Thermodesulfobium 9 2 1
Thermodesulforhabdus 20
Thermodesulfovibrio 9 62
Thermoflexibacter 70
Thermogemmatispora 5 31
Thermogutta 16 1
Thermogymnomonas 13
Thermohalobacter 11
Thermohydrogenium 18
Thermoleophilum 24
Thermolithobacter 33
Thermolongibacillus 33
Thermomarinilinea 15
Thermomicrobium 1
Thermomonas 5 3 3
Thermomonospora 1 3
Thermonema 14
Thermophagus 40
Thermopolyspora 2
Thermosediminibacter 12 1
Thermosinus 1
Thermosipho 1
Thermosporothrix 2
Thermostaphylospora 2
Thermosulfidibacter 2
Thermosynechococcus 1
Thermosyntropha 3
Thermotoga 1
Thermotomaculum 7
Thermovenabulum 20 39
Thermovibrio 1
Thermovirga 3
Thermovorax 1
Thermus 23 63
Theromyzon 1
Thioalbus 1
Thioalkalicoccus 5
Thioalkalispira 6
Thioalkalivibrio 21 67
Thiobacillus 1 27 65
Thiobacter 2
Thiocapsa 46 128
Thioclava 1 1
Thiococcus 1
Thiocystis 27 4
Thiofaba 1
Thiofilum 2 <