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Bacteria reported by various 16s providers
Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.
Critical Reading to understand the differences
The Taxonomy Nightmare
class
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Acidimicrobiia
5
121
22
Acidithiobacillia
18
1
Acidobacteriia
850
197
5
40
Alphaproteobacteria
484
325
14
155
Anaerolineae
12
62
78
Aquificae
4
Archaeoglobea
1
Ardenticatenia
9
1
Armatimonadia
1
Babeliae
2
Bacilli
851
361
39
164
Bacteroidia
853
341
19
162
Balneolia
198
7
Betaproteobacteria
808
343
19
165
Blastocatellia
2
63
2
Brocadiae
3
Caldilineae
1
102
3
Caldisericia
1
2
candidate division Termite Group 3
2
Chitinispirillia
6
Chitinophagia
7
280
5
Chlamydiia
50
15
Chlorobia
1
29
134
Chloroflexia
3
32
14
Chthonomonadetes
28
3
Clostridia
854
361
39
165
Coriobacteriia
840
361
34
9
Cytophagia
10
306
13
4
Deferribacteres
1
1
2
Dehalococcoidia
1
80
33
Deinococci
11
82
12
110
Deltaproteobacteria
686
348
31
161
Dictyoglomi
28
Elusimicrobia
7
49
20
1
Endomicrobia
1
Epsilonproteobacteria
297
182
10
89
Erysipelotrichia
834
361
39
161
Fibrobacteria
206
76
15
Fimbriimonadia
15
1
Flavobacteriia
505
228
13
138
Fusobacteriia
169
209
7
85
Gammaproteobacteria
783
341
19
169
Gemmatimonadetes
2
30
16
2
Gloeobacteria
5
1
Halobacteria
2
Holophagae
177
80
Ignavibacteria
2
253
16
20
Ktedonobacteria
6
13
Lentisphaeria
303
126
8
2
Limnochordia
2
1
Malasseziomycetes
2
Methanobacteria
231
98
17
60
Methanomicrobia
20
2
Methylacidiphilae
3
Mollicutes
180
312
26
153
Negativicutes
855
361
37
11
Nitriliruptoria
19
85
Nitrososphaeria
1
Nitrospinia
2
Nitrospira
2
20
28
Oligoflexia
1
4
Oligosphaeria
1
14
Opitutae
108
155
1
102
Pedosphaerae
1
Pentapetalae
21
Phycisphaerae
2
4
Planctomycetia
3
42
6
Rhodothermia
4
Rubrobacteria
2
34
4
Saprospiria
68
4
Solibacteres
1
6
Spartobacteria
23
8
Sphingobacteriia
22
241
28
156
Spirochaetia
28
62
4
Synergistia
251
151
1
117
Thermodesulfobacteria
27
Thermoleophilia
2
39
5
Thermolithobacteria
17
Thermomicrobia
1
2
1
Thermoplasmata
21
17
Thermoprotei
5
Thermotogae
4
Tissierellia
326
343
17
158
unclassified alpha proteobacteria
2
unclassified epsilon proteobacteria
2
Verrucomicrobiae
522
324
28
147
family
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Zetaproteobacteria
1
10
1
Acanthopleuribacteraceae
20
Acaryochloridaceae
2
Acetobacteraceae
7
105
1
61
Acholeplasmataceae
18
236
11
145
Acidaminococcaceae
597
331
23
11
Acidiferrobacteraceae
6
4
Acidimicrobiaceae
123
23
Acidithiobacillaceae
18
1
Acidobacteriaceae
99
62
32
Acidothermaceae
13
1
Actinomycetaceae
690
315
26
133
Actinopolysporaceae
51
48
Aerococcaceae
94
290
70
Aeromonadaceae
11
92
2
52
Akkermansiaceae
281
314
28
10
Alcaligenaceae
12
72
10
157
Alcanivoracaceae
12
26
Algiphilaceae
15
Alicyclobacillaceae
139
8
4
Alteromonadaceae
186
45
Amoebophilaceae
136
Anaerolineaceae
10
61
25
Anaeromyxobacteraceae
219
2
Anaeroplasmataceae
128
146
3
14
anamorphic Mycosphaerellaceae
1
Anaplasmataceae
18
49
Aphanizomenonaceae
1
4
Aphanothecaceae
2
1
Apiaceae
1
Aquificaceae
3
6
Archaeoglobaceae
1
Archangiaceae
27
4
Ardenticatenaceae
9
1
Armatimonadaceae
1
Atopobiaceae
118
233
12
6
Aurantimonadaceae
1
1
3
Babeliaceae
3
Bacillaceae
256
282
34
151
Bacillales Family X. Incertae Sedis
1
182
151
Bacteriovoracaceae
2
14
1
Bacteroidaceae
835
359
38
163
Balneolaceae
201
1
12
bandicoots
1
Barnesiellaceae
303
22
Bartonellaceae
2
12
Bdellovibrionaceae
1
3
Beijerinckiaceae
1
6
9
Bernardetiaceae
44
1
Beutenbergiaceae
1
1
Bifidobacteriaceae
669
355
28
159
Blastocatellaceae
2
Blattabacteriaceae
4
Bogoriellaceae
12
3
Borreliaceae
2
9
Brachyspiraceae
14
19
Bradymonadaceae
1
Bradyrhizobiaceae
17
25
14
Brevibacteriaceae
70
42
16
Brevinemataceae
2
Brocadiaceae
4
Brucellaceae
29
19
4
16
Budviciaceae
115
4
Burkholderiaceae
42
108
15
98
Caedimonadaceae
1
Calanidae
1
Caldicoprobacteraceae
253
8
Caldilineaceae
1
105
67
Caldisericaceae
1
1
Calditrichaceae
40
Campylobacteraceae
296
153
4
65
Candidatus Homeothermaceae
4
Cardiobacteriaceae
10
67
4
Carnobacteriaceae
366
186
5
78
Catabacteriaceae
107
70
1
Catalimonadaceae
26
Catenulisporaceae
1
4
Caulobacteraceae
17
44
81
Celerinatantimonadaceae
4
Cellulomonadaceae
21
13
Cellvibrionaceae
29
4
Centrarchidae
1
Chamaesiphonaceae
4
3
Chelatococcaceae
1
1
Chelidae
1
Chitinispirillaceae
6
Chitinivibrionaceae
2
Chitinophagaceae
9
279
90
Chlamydiaceae
1
2
Chlorobiaceae
30
135
Chloroflexaceae
2
1
Chlorogloeopsidaceae
4
Chordaceae
1
Christensenellaceae
138
53
25
23
Chromatiaceae
5
212
1
144
Chromobacteriaceae
44
4
Chroococcaceae
61
Chroococcidiopsidaceae
2
1
Chrysiogenaceae
6
44
Chthoniobacteraceae
4
8
Chthonomonadaceae
29
3
Cichlidae
1
Clostridiaceae
839
359
39
179
Clostridiales Family XI. Incertae Sedis
231
Clostridiales Family XII. Incertae Sedis
18
208
Clostridiales Family XIII. Incertae Sedis
707
329
33
6
Clostridiales Family XVI. Incertae Sedis
7
101
Clostridiales Family XVII. Incertae Sedis
32
17
Clostridiales incertae sedis
745
4
Cochlospermaceae
1
Cohaesibacteraceae
1
1
Coleofasciculaceae
4
Colwelliaceae
84
4
Comamonadaceae
129
68
2
138
Competibacteraceae
62
Conexibacteraceae
1
6
1
Corbulidae
1
Coriobacteriaceae
826
317
36
176
Corynebacteriaceae
495
217
7
96
Coxiellaceae
2
22
8
Criblamydiaceae
20
Crocinitomicaceae
19
3
1
crown conchs
1
Cryomorphaceae
1
40
1
Cyanobacteriaceae
21
23
Cyanothecaceae
1
Cyclobacteriaceae
104
4
Cytophagaceae
6
256
4
141
Dacrymycetaceae
1
Deferribacteraceae
1
39
63
Defluviitaleaceae
20
93
3
Dehalococcoidaceae
18
30
Deinococcaceae
10
45
76
Demequinaceae
17
Dermabacteraceae
70
28
27
Dermacoccaceae
7
9
3
Dermatophilaceae
1
1
Dermocarpellaceae
1
Desulfarculaceae
99
1
Desulfobacteraceae
2
229
2
41
Desulfobulbaceae
41
1
2
Desulfofervidaceae
1
Desulfohalobiaceae
20
49
Desulfomicrobiaceae
98
14
Desulfonatronaceae
22
49
Desulfovibrionaceae
684
329
34
162
Desulfurellaceae
3
2
Desulfurobacteriaceae
5
1
Desulfuromonadaceae
46
80
Dictyoglomaceae
28
1
Dientamoebidae Grasse, 1953
1
Dietziaceae
4
48
13
Dunaliellaceae
1
Dysgonamonadaceae
24
4
Ectothiorhodospiraceae
1
88
114
Eggerthellaceae
459
351
38
11
Egibacteraceae
1
Egicoccaceae
1
Elusimicrobiaceae
7
29
4
Emplectonematidae
1
Endomicrobiaceae
1
Endozoicomonadaceae
1
Enterobacteriaceae
639
231
18
169
Enterococcaceae
157
99
30
156
Entomoplasmataceae
30
89
Eremolepidaceae
1
Erwiniaceae
126
105
4
4
Erysipelotrichaceae
834
349
24
179
Erythrobacteraceae
3
13
31
Eubacteriaceae
322
359
39
160
Euzebyaceae
14
85
Ferrimonadaceae
23
2
Ferrovaceae Johnson et al. 2014
1
Fervidobacteriaceae
4
Fibrobacteraceae
155
75
16
Fimbriimonadaceae
15
2
Flammeovirgaceae
1
153
48
Flavobacteriaceae
501
201
3
140
Fortieaceae
4
Francisellaceae
26
10
Frankiaceae
2
4
Fusobacteriaceae
140
179
8
68
Gaiellaceae
2
19
Gallionellaceae
15
19
Geminicoccaceae
2
Gemmataceae
1
6
4
Gemmatimonadaceae
1
13
3
Geobacteraceae
19
13
Geodermatophilaceae
3
47
4
Glareolidae
1
Gloeobacteraceae
5
1
Glycomycetaceae
57
16
Gnetaceae
1
Gomontiellaceae
38
1
Gomphosphaeriaceae
5
Gordoniaceae
4
33
7
Gottschalkiaceae
4
Gracilibacteraceae
8
178
4
Granulosicoccaceae
34
1
Haematopodidae
1
Hafniaceae
6
25
1
Hahellaceae
71
18
Halanaerobiaceae
1
82
27
Halieaceae
1
36
1
Haliscomenobacteraceae
37
3
Haloarchaeaceae
1
Halobacteriovoraceae
18
4
Halobacteroidaceae
120
17
Halomonadaceae
1
183
2
73
Haloplasmataceae
1
9
Halorubraceae
1
Halothiobacillaceae
33
3
Hapalosiphonaceae
1
Helicobacteraceae
4
14
59
Heliobacteriaceae
75
4
73
Herpetosiphonaceae
2
Heteroleibleiniaceae
6
Holophagaceae
168
80
Holosporaceae
3
Hungateiclostridiaceae
4
Hydrogenophilaceae
5
73
24
Hydrogenothermaceae
8
1
Hyellaceae
1
Hymenobacteraceae
2
69
4
Hyphomicrobiaceae
4
44
74
Hyphomonadaceae
1
197
21
Iamiaceae
3
9
Ichthyobacteriaceae
1
Idiomarinaceae
15
14
Ignavibacteriaceae
1
19
17
Immundisolibacteraceae
3
Intrasporangiaceae
3
22
6
Isosphaeraceae
2
5
5
Jiangellaceae
2
4
Jonesiaceae
28
1
Kallotenuaceae
7
Kangiellaceae
17
1
Kiloniellaceae
19
3
36
Kineosporiaceae
1
9
4
Kofleriaceae
1
15
11
Kordiimonadaceae
51
Kosmotogaceae
1
1
Labilitrichaceae
24
Lachnospiraceae
850
359
39
183
Lactobacillaceae
824
353
26
154
Lanariaceae
1
Legionellaceae
1
21
106
Lentisphaeraceae
3
Leptolyngbyaceae
1
2
4
Leptospiraceae
14
64
Leptotrichiaceae
52
68
29
Leuconostocaceae
113
332
10
135
Lewinellaceae
7
Limnochordaceae
2
1
Listeriaceae
1
121
120
Litoricolaceae
20
6
Magnetococcaceae
6
1
Malasseziaceae
2
Marinifilaceae
94
4
Marinilabiliaceae
1
207
8
1
Mariprofundaceae
1
10
1
Melioribacteraceae
251
16
4
Merismopediaceae
3
Mesoaciditogaceae
1
Methanobacteriaceae
231
96
5
60
Methanocorpusculaceae
1
1
Methanomassiliicoccaceae
21
17
Methanoregulaceae
1
Methylacidiphilaceae
4
Methylobacteriaceae
9
31
21
Methylococcaceae
1
73
6
Methylocystaceae
1
8
7
Methylophilaceae
98
70
Methylothermaceae
16
Microbacteriaceae
67
197
66
Microbulbiferaceae
4
Micrococcaceae
179
174
10
76
Microcoleaceae
114
9
Microcystaceae
4
Micromonosporaceae
2
78
50
Micropepsaceae
8
Microscillaceae
45
1
Microthrixaceae
1
Midichloriaceae
1
1
mitosporic Venturiaceae
1
moles, shrew-moles, and desmans
1
Mooreiaceae
2
Moraxellaceae
40
179
2
88
Morganellaceae
11
176
4
Moritellaceae
1
1
Mycobacteriaceae
75
32
49
Mycoplasmataceae
16
241
6
132
Myxococcaceae
2
4
Mzabimycetaceae
56
Nakamurellaceae
2
4
Nannocystaceae
10
8
Nanopelagicaceae
3
Natranaerobiaceae
12
1
Nautiliaceae
11
1
Neisseriaceae
88
69
45
nightshade family
13
Nitriliruptoraceae
5
Nitrosomonadaceae
8
129
5
4
Nitrosopumilaceae
1
Nitrososphaeraceae
1
Nitrospinaceae
2
Nitrospiraceae
2
21
28
Nocardiaceae
23
5
22
Nocardioidaceae
4
130
28
Nocardiopsaceae
106
4
Nostocaceae
1
2
132
Oceanospirillaceae
108
46
Odoribacteraceae
358
343
35
152
Oleiphilaceae
3
Oligosphaeraceae
14
Opitutaceae
1
24
5
Orbaceae
3
4
Oscillatoriaceae
43
83
Oscillospiraceae
791
358
38
11
Oxalobacteraceae
281
180
26
109
Paenibacillaceae
3
309
32
134
Paludibacteraceae
1
4
Paracaedibacteraceae
1
Parachlamydiaceae
2
2
Paridae
1
Parvularculaceae
5
1
Pasteurellaceae
592
298
20
125
Pasteuriaceae
8
Patulibacteraceae
2
1
Pectobacteriaceae
1
165
1
4
Pelagibacteraceae
4
1
Peptococcaceae
559
331
26
161
Peptoniphilaceae
321
333
9
6
Peptostreptococcaceae
846
358
33
168
Persicobacteraceae
37
4
Petrotogaceae
4
Phycisphaeraceae
2
1
Phyllobacteriaceae
40
15
8
Piscirickettsiaceae
2
108
33
Planctomycetaceae
2
37
2
Planoceridae
1
Planococcaceae
40
303
18
84
Pleuronectidae
1
Porphyromonadaceae
570
359
38
163
Porticoccaceae
1
Prevotellaceae
625
358
24
159
Prochloraceae
2
4
Prochlorococcaceae
1
Prochlorotrichaceae
3
Prolixibacteraceae
53
1
Promicromonosporaceae
12
8
Propionibacteriaceae
142
143
15
17
Prorhynchidae
1
Proteinivoraceae
171
Pseudanabaenaceae
1
49
Pseudoalteromonadaceae
21
10
Pseudomonadaceae
71
164
4
45
Pseudonocardiaceae
1
98
67
Psychromonadaceae
15
7
Puniceicoccaceae
7
151
98
Rarobacteraceae
25
Rhabdochlamydiaceae
14
Rhizobiaceae
18
33
11
54
Rhodanobacteraceae
1
76
4
Rhodobacteraceae
11
99
4
53
Rhodobiaceae
3
4
4
Rhodocyclaceae
76
155
107
Rhodospirillaceae
404
287
26
128
Rhodothalassiaceae
9
Rhodothermaceae
56
6
141
Rickettsiaceae
99
96
Rikenellaceae
776
357
38
34
Rivulariaceae
35
90
Roseiarcaceae
3
Roseiflexaceae
1
8
1
rove beetles
1
Rubricoccaceae
3
Rubritaleaceae
66
Rubrobacteraceae
1
19
4
Ruminococcaceae
839
359
39
182
Saccharospirillaceae
138
5
Salinibacteraceae
1
Salinisphaeraceae
11
1
Salinivirgaceae
1
Sandaracinaceae
4
1
Sanguibacteraceae
1
1
Saprospiraceae
26
17
Schleiferiaceae
8
Scytonemataceae
1
4
Sedimentisphaeraceae
3
Segniliparaceae
13
1
Selenomonadaceae
62
217
14
6
Shewanellaceae
55
105
Simkaniaceae
6
1
Simmondsiaceae
1
Sinobacteraceae
3
52
117
Sneathiellaceae
3
Solibacteraceae
1
1
Solirubrobacteraceae
1
10
4
Sorangiaceae
1
1
15
Sphaerobacteraceae
6
Sphingobacteriaceae
8
241
26
159
Sphingomonadaceae
29
207
43
Spirillaceae
14
Spirochaetaceae
1
39
47
Spiroplasmataceae
146
4
Spirulinaceae
4
Spongiibacteraceae
78
1
Sporichthyaceae
6
1
Sporolactobacillaceae
63
36
Sporomusaceae
23
232
4
Staphylococcaceae
234
115
3
129
Sterolibacteriaceae
12
4
Streptococcaceae
839
357
39
162
Streptomycetaceae
75
2
50
Streptosporangiaceae
64
55
Succinivibrionaceae
16
107
46
Sulfolobaceae
5
Sutterellaceae
755
355
39
8
Symbiobacteriaceae
96
104
Synechococcaceae
6
49
Synergistaceae
251
152
1
118
Syntrophaceae
26
33
Syntrophobacteraceae
146
64
Syntrophomonadaceae
12
176
131
Syntrophorhabdaceae
1
13
Tannerellaceae Ormerod et al. 2016
429
9
Taphrinaceae
1
Temperatibacteraceae
1
Thermaceae
1
23
89
Thermoactinomycetaceae
1
169
98
Thermoanaerobacteraceae
229
120
138
Thermoanaerobacterales Family III. Incertae Sedis
67
1
151
Thermoanaerobacterales Family IV. Incertae Sedis
7
Thermodesulfobacteriaceae
12
27
Thermodesulfobiaceae
15
23
6
3
Thermogemmatisporaceae
5
13
Thermoleophilaceae
18
Thermolithobacteraceae
17
Thermomicrobiaceae
1
Thermomonosporaceae
29
53
Thermonemataceae
9
Thermosporotrichaceae
2
Thermotogaceae
1
19
Thioalkalispiraceae
1
28
3
Thiobacillaceae
5
1
Thiotrichaceae
1
42
109
Thorselliaceae
34
Tissierellaceae
1
32
1
Trueperaceae
1
9
Tsukamurellaceae
1
2
25
unclassified Enterobacterales
3
Veillonellaceae
807
353
32
165
Verrucomicrobia subdivision 3
4
1
Verrucomicrobiaceae
241
65
139
Vesicomyidae
1
Vibrionaceae
1
49
13
Vicinamibacteraceae
1
Victivallaceae
303
126
8
4
Waddliaceae
1
Wenzhouxiangellaceae
18
1
Woeseiaceae
1
Xanthobacteraceae
2
6
7
Xanthomonadaceae
35
112
127
Yersiniaceae
22
62
5
4
genus
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Zoogloeaceae
2
4
16SrXII (Stolbur group)
3
Abiotrophia
19
34
6
Absiella
3
Acanthopleuribacter
20
Acaryochloris
2
Acetanaerobacterium
131
194
1
Acetatifactor
2
326
1
Acetitomaculum
148
254
1
Acetivibrio
34
293
27
Acetoanaerobium
204
1
Acetobacter
11
4
Acetobacterium
156
155
Acetobacteroides
107
Acetohalobium
13
Acetomicrobium
16
1
Acetonema
93
Acholeplasma
7
235
1
117
Achromatium
2
Achromobacter Yabuuchi and Yano 1981 emend. Yabuuchi et al. 1998
1
9
20
Acidaminobacter
97
46
Acidaminococcus
106
178
4
122
Acidibacter
21
Acidicaldus
1
Acidicapsa
28
Acidiferrobacter
3
3
Acidihalobacter
1
Acidimicrobium
23
Acidiphilium
1
7
Acidipropionibacterium
1
4
Acidisphaera
1
Aciditerrimonas
45
Acidithiobacillus
18
1
Acidobacterium
3
Acidothermus
13
Acidovorax
8
14
12
Acinetobacter
33
102
1
37
Acinothrix
1
1
Acizzia
1
Acrocarpospora
2
Actimicrobium
2
Actinaurispora
1
Actinoallomurus
1
Actinoalloteichus
4
Actinobacillus
105
82
3
86
Actinobaculum
20
5
17
Actinocatenispora
35
39
Actinocorallia
3
1
Actinokineospora
1
Actinomadura
18
15
Actinomyces
635
276
10
127
Actinomycetospora
2
Actinoplanes
43
7
Actinopolymorpha
12
Actinopolyspora
48
49
Actinosynnema
1
Actinotignum
20
36
Adhaeribacter
10
Adlercreutzia
565
3
131
Advenella
6
3
Aequorivita
7
2
2
Aeribacillus
24
1
Aeriscardovia
51
Aerococcus
19
84
6
Aeromicrobium
2
3
3
Aeromonas
11
63
2
5
Aerosphaera
52
Aestuariispira
156
2
Afipia
1
3
Agaribacter
131
Agarilytica
1
Agarivorans
3
1
Agathiphaga
1
Agathobacter
1
Agathobaculum
3
Aggregatibacter
189
57
48
Agmenellum
1
Agreia
1
Agrococcus
3
1
4
Agromyces
22
34
Ahniella
1
Akkermansia
517
316
28
158
Albidovulum
4
Albimonas
2
Alcaligenes
2
5
3
Alcalilimnicola
1
Alcanivorax
5
26
Algibacter
3
1
Algicola
19
Algimonas
5
Algiphilus
15
Algivirga
1
Algorimarina
1
Algoriphagus
47
3
Alicycliphilus
1
1
4
Alicyclobacillus
39
4
3
Aliiarcobacter
1
Aliidiomarina
10
Aliifodinibius
80
Aliihoeflea
1
Aliivibrio
1
Alishewanella
25
24
Alistipes
776
350
23
21
Alkalibacillus
2
16
Alkalibacter
38
Alkalibacterium
5
1
61
Alkalibaculum
76
Alkaliflexus
16
1
Alkalimarinus
5
Alkaliphilus
128
4
157
Alkalispirillum
1
Alkalitalea
1
Alkanibacter
1
Alkanindiges
1
3
Allisonella
77
66
3
Alloactinosynnema
4
Allobaculum
9
49
23
Allocatelliglobosispora
1
Allochromatium
11
Allofrancisella
2
1
Allofustis
2
1
1
Alloiococcus
3
33
2
Allokutzneria
1
1
Alloprevotella
96
170
2
Alloscardovia
27
39
21
Alocasia
1
Alsobacter
1
Altererythrobacter
3
5
4
Alteribacillus
1
Alterococcus
13
Alteromonas
8
4
Altibacter
1
Alysiella
2
2
Amaricoccus
1
1
8
Ameyamaea
3
Aminicella
174
Aminiphilus
1
23
Aminipila
4
Aminivibrio
15
Aminobacter
1
4
Aminobacterium
8
6
Aminomonas
23
4
Ammonifex
4
44
Ammoniphilus
10
9
Amnibacterium
1
Amoebophilus
135
Amorphonostoc
1
58
Amphibacillus
11
4
Amphritea
1
5
Amycolatopsis
2
9
Amylibacter
3
Anabaenopsis
1
Anaerobacillus
25
1
44
Anaerobacter
64
Anaerobacterium
49
16
4
Anaerobiospirillum
12
Anaerobium
110
20
Anaerobranca
169
120
Anaerobutyricum
4
Anaerocella
58
Anaerococcus
407
214
6
83
Anaerocolumna
295
8
Anaerofilum
261
178
8
151
Anaerofustis
211
212
40
Anaeroglobus
22
207
Anaerolinea
4
12
11
Anaeromassilibacillus
10
Anaeromusa
5
33
Anaeromyxobacter
219
2
Anaerophaga
3
Anaeroplasma
48
78
1
12
Anaerorhabdus
6
Anaerosalibacter
83
Anaerosinus
37
5
Anaerosphaera
33
Anaerospora
59
Anaerosporobacter
586
211
6
Anaerostipes
824
375
39
164
Anaerotaenia
3
Anaerotignum
5
Anaerotruncus
772
314
31
158
Anaerovibrio
9
2
1
137
Anaerovorax
286
18
14
Anaplasma
6
1
Anderseniella
4
Andreprevotia
1
Aneurinibacillus
1
18
3
Angelakisella
23
Annandia
2
Anoxybacillus
4
16
23
Anoxybacter
4
Anoxynatronum
240
Antarctobacter
1
aphid P-endosymbionts
1
3
Apibacter
1
Aquabacterium
5
12
1
Aquamicrobium
4
Aquaspirillum
9
Aquibacter
1
6
Aquicella
5
Aquiflexum
4
1
Aquihabitans
7
Aquimarina
7
7
Aquimonas
9
1
Aquincola
1
Aquipuribacter
1
3
Aquisalimonas
20
Aquisphaera
2
Aquitalea
3
5
Arabia
1
1
Arachidicoccus
3
Arcanobacterium
34
12
1
7
Archaeoglobus
1
Archangium
1
Arcicella
41
Arcobacter
2
4
8
Arcticibacterium
1
Ardenticatena
9
Arenibacter
1
4
Arenimonas
12
Argyropelecus
1
Arhodomonas
7
Aridibacter
13
Armatimonas
1
Aromatoleum
1
Arsenicicoccus
1
1
Arsenophonus
18
4
Arthothelium
1
Arthrobacter
15
3
1
42
Arthromitus
3
Arthrospira
1
1
5
Arum
1
Asaccharobacter
11
Asaccharospora
104
Asaia
4
1
Asinibacterium
3
Asteroleplasma
74
94
1
Asticcacaulis
1
19
65
Atlantibacter
1
Atopobium
116
136
3
52
Atopococcus
9
Atopostipes
24
Aurantimicrobium
1
Aurantimonas
1
Auraticoccus
1
3
Aureibacter
3
Aureicoccus
1
Aureimonas
1
1
Aureispira
1
Aureitalea
3
Auricoccus
1
Auritidibacter
1
Austwickia
1
Avibacterium
23
17
Azoarcus
3
1
14
Azohydromonas
3
Azonexus
6
Azorhizobium
1
1
Azospira
12
2
1
Azospirillum
2
133
2
35
Babela
2
Bacillus
81
159
1
127
Bacillus altitudinis complex
3
Bacteria
2
Bacterioplanes
1
1
Bacteriovorax
1
10
Bacteroides
835
350
18
182
Baia
28
Balneatrix
5
Balneola
70
12
Barnesiella
444
312
5
8
Barrientosiimonas
8
Bartonella
2
11
Basfia
3
1
Basilea
1
Bdellovibrio
1
3
Beggiatoa
1
Beijerinckia
2
Belliella
13
3
Bellilinea
1
Belnapia
1
1
Bergeyella
15
3
Bernardetia
31
1
Beutenbergia
1
Bibersteinia
1
2
Bifidobacterium
655
340
16
175
Bilophila
644
33
162
Biostraticola
13
Bisgaardia
31
Bittarella
8
Bizionia
2
Blastocatella
3
Blastochloris
3
Blastococcus
1
1
Blastocystis
2
Blastomonas
1
Blastopirellula
6
Blattabacterium
4
Blautia
838
361
39
183
Blochmannia
42
Bogoriella
5
Bombiscardovia
1
1
Bordetella
21
4
Borrelia
2
10
Bosea
3
5
5
Bowmanella
24
Brachiaria
1
Brachybacterium
15
6
20
Brachymonas
1
Bradymonas
1
Bradyrhizobium
12
1
12
Branchiibius
4
Brassicibacter
252
5
Brenneria
160
5
Breoghania
1
Brevefilum
1
Brevibacillus
39
1
20
Brevibacterium
70
42
18
Brevifollis
5
Brevinema
2
Brevirhabdus
1
Brevundimonas
14
13
15
Brochothrix
5
110
Brockia
12
Brucella
1
1
Bryobacter
3
Bulleidia
5
25
1
28
Burkholderia
2
26
10
50
Burkholderia cepacia complex
4
Bursatella
1
Buttiauxella
47
1
1
Butyricicoccus
79
230
37
5
Butyricimonas
479
319
31
146
Butyrivibrio
432
355
30
121
Bythopirellula
4
Caballeronia
9
Caedibacter
2
Caenispirillum
8
Caldalkalibacillus
52
Caldanaerobacter
1
38
7
Caldanaerobius
16
Caldanaerovirga
2
Caldariibacterium
2
Caldicellulosiruptor
25
1
141
Caldicoprobacter
125
8
Caldilinea
3
67
Caldimicrobium
1
1
Caldimonas
6
Caldinitratiruptor
98
Caldisalinibacter
172
Caldisericum
1
1
Calditerrivibrio
3
1
Caldithrix
1
40
Calochaete
4
Calolisianthus
1
Caloramator
1
241
10
146
Caloribacterium
5
Calothrix
35
83
Camarhynchus
1
Camelimonas
2
Camellia
1
Caminicella
232
3
Campylobacter
294
159
4
66
Campylotropis
1
Candidatus Aquiluna Hahn 2009
1
Candidatus Azobacteroides
21
Candidatus Contubernalis
15
Candidatus Endobugula
10
Candidatus Glomeribacter Bianciotto et al. 2003
72
Candidatus Ishikawaella
1
Candidatus Nitrosoglobus
1
Candidatus Pelagibacter
4
Candidatus Phlomobacter
4
Candidatus Phytoplasma
8
134
Candidatus Regiella
13
Candidatus Rhabdochlamydia
14
Candidatus Scalindua
3
Candidatus Soleaferrea
538
4
Candidatus Stoquefichus
127
1
Candidatus Tammella
74
Candidatus Vidania
1
Candidatus Walczuchella
1
Capnocytophaga
13
8
5
Caproiciproducens
1
31
4
Carboxydocella
8
101
Carboxydothermus
5
4
Carboxylicivirga
107
1
Cardiobacterium
10
55
3
Carnimonas
12
Carnobacterium
10
2
15
Casaltella
245
4
Castellaniella
1
Catabacter
106
70
Catellibacterium
3
Catellicoccus
1
2
Catenibacterium
308
120
1
56
Catenisphaera
38
2
Catenovulum
1
Catenulispora
1
4
Catonella
11
347
17
126
Caulobacter
4
6
5
Cecembia
8
Cedecea
37
Celeribacter
3
Celerinatantimonas
4
Cellulomonas
21
10
Cellulophaga
3
4
Cellulosibacter
20
Cellulosilyticum
15
345
2
4
Cellulosimicrobium
3
Cellvibrio
9
3
Centipeda
19
Cerasicoccus
94
42
Cereibacter
1
Cesiribacter
16
Cetobacterium
4
15
12
Chamaesiphon
4
3
Chania
9
3
Chelativorans
4
1
Chelatococcus
2
1
Chelonobacter
3
Chiayiivirga
2
Chiropotes
1
Chishuiella
5
Chitinilyticum
1
Chitinimonas
12
Chitinispirillum
6
Chitinivibrio
2
Chitinolyticbacter
1
Chitinophaga
16
7
Chlamydia
1
1
Chloracidobacterium
9
3
Chlorobaculum
136
Chlorobium
1
1
Chloroflexus
1
Chlorogloeopsis
5
Chloroherpeton
9
3
Chondrocystis
1
Chordaria
1
Christensenella
137
47
17
11
Chromatium
3
53
Chromobacterium
6
14
Chromohalobacter
3
Chroococcidiopsis
2
1
Chroococcus
60
Chryseobacterium
11
31
23
Chryseolinea
7
4
Chryseomicrobium
9
Chrysopa
1
Chthoniobacter
4
8
Chthonomonas
29
3
Cichlasoma
1
Citreitalea
1
Citricoccus
1
Citrobacter
62
3
14
40
Citromicrobium
3
Cladothrix Cohn 1875
1
Clavibacter
2
4
Cloaca
221
19
9
90
Cloacibacillus
115
58
11
Cloacibacterium
6
6
4
Clostridiisalibacter
5
Clostridioides
333
39
3
9
Clostridium
820
350
19
180
Cnuella
3
Cobetia
1
Cocleimonas
2
Coenonia
2
Cohaesibacter
1
1
Cohnella
23
75
Coleofasciculus
1
Colidextribacter
1
25
Collimonas
14
5
Collinsella
812
305
34
141
Colwellia
16
4
Comamonas
31
21
17
Commensalibacter Roh et al. 2008
1
Conchiformibius
1
Conexibacter
6
1
Confluentimicrobium
1
Congregibacter
3
coot
1
Coprobacillus
171
169
5
157
Coprobacter
311
246
11
1
Coprococcus
2
361
33
177
Coprothermobacter
6
18
2
Coptothyris
1
Coraliomargarita
25
54
Corallibacter
1
Coriobacterium
8
2
23
Corticibacter
1
Corynebacterium
494
207
6
104
Couchioplanes
2
1
Couratari
1
Coxiella
9
1
Craurococcus
2
Criblamydia
20
Crinalium
1
1
Croceibacter
6
1
Croceicoccus
1
Cronobacter
87
26
4
Crossiella
1
Cruoricaptor
1
29
Cryobacterium
11
2
1
Cryomorpha
35
Cryptanaerobacter
1
Cryptobacterium
3
122
1
Cucumibacter
2
Cupriavidus
2
19
5
Curculigo
1
Curtibacterium
1
3
Curvibacter
10
3
2
Cutibacterium
36
5
1
Cyanobacterium
21
23
Cyanobium
1
3
1
Cyanothece
1
Cyclobacterium
19
4
Cycloclasticus
12
4
Cyclonatronum
3
Cylindrospermum
1
Cyphomandra
5
1
Cystobacter
14
4
Cytophaga
1
29
1
Dactylosporangium
1
Dasania
9
Dechloromonas
27
Deefgea
3
Deferribacter
12
46
Deferrisoma
12
Defluviicoccus
5
Defluviimonas
3
Defluviitalea
2
77
Defluviitoga
1
1
Dehalobacter
71
5
4
Dehalobacterium
9
74
Dehalococcoides
18
3
Dehalogenimonas
66
32
Dehalospirillum
12
Deinococcus
10
44
1
77
Delftia
80
4
4
Deltavirus
1
Demequina
16
1
Dendrosporobacter
25
Denitratisoma
1
5
22
Denitrobacter
1
Denitrobacterium
1
7
1
Denitrovibrio
3
Dermabacter
57
22
6
Dermacoccus
1
1
4
Dermatosorus
1
Derxia
12
Desemzia
73
Desertibacter
3
Desmospora
5
Desulfacinum
13
Desulfallas
1
Desulfarculus
66
1
Desulfatibacillum
1
1
Desulfatiferula
12
Desulfatiglans
4
Desulfatirhabdium
1
Desulfatitalea
4
Desulfitibacter
1
31
2
Desulfitispora
19
Desulfitobacterium
1
31
38
Desulfobacca
11
2
Desulfobacter
5
18
Desulfobacterium
112
1
Desulfobacula
3
Desulfobaculum
7
Desulfobotulus
1
Desulfobulbus
35
1
Desulfocapsa
1
1
Desulfocarbo
55
Desulfocella
1
129
Desulfococcus
3
4
Desulfocurvus
1
Desulfofaba
18
Desulfofarcimen
4
Desulfofrigus
16
15
Desulfofustis
3
Desulfoglaeba
100
Desulfohalobium
3
2
Desulfomicrobium
92
14
Desulfomonile
4
30
Desulfonatronobacter
3
Desulfonatronovibrio
4
42
Desulfonatronum
22
49
Desulfonauticus
5
8
Desulfonema
13
Desulfonispora
48
Desulfoplanes
8
Desulforegula
27
Desulforhabdus
1
Desulfosalsimonas
2
Desulfosarcina
12
11
Desulfosoma
53
Desulfosporosinus
1
87
1
88
Desulfotalea
1
1
Desulfothermus
3
Desulfotomaculum
2
285
10
91
Desulfovibrio
406
323
16
149
Desulfovirga
6
Desulfurella
2
2
Desulfuribacillus
2
Desulfurispira
2
Desulfurispirillum
44
Desulfurispora
207
77
Desulfurivibrio
2
1
Desulfurobacterium
4
1
Desulfurococcus
1
Desulfuromonas
29
9
Desulfuromusa
2
71
Dethiobacter
1
6
23
Dethiosulfatibacter
117
Dethiosulfovibrio
48
74
Devosia
1
26
62
Devriesea
1
Dialister
515
327
13
103
Diaphorobacter
1
3
Dichelobacter
1
Dichotomicrobium
3
Dickeya
8
1
10
Dictyoglomus
28
1
Dielma
330
207
9
4
Dientamoeba Jepps & Dobell, 1918
1
Dietzia
3
48
13
Dinoroseobacter
1
Diplorickettsia
11
Diplosphaera
8
Dissulfuribacter
7
Dokdonella
7
73
Dokdonia
11
4
Dolichospermum
111
Dolosicoccus
1
Dolosigranulum
4
75
Dongia
80
Dorea
825
368
38
178
Doritaenopsis
1
Draconibacterium
8
1
Duganella
1
2
Duncaniella
4
Duodenibacillus
8
1
Dyadobacter
32
57
Dyella
3
2
Dysgonomonas
11
238
4
133
Echinicola
25
4
Echinops
1
Ectothiorhodosinus
3
Ectothiorhodospira
15
50
Edaphobacter
21
Edwardsiella
9
5
Effusibacillus
82
Eggerthella
604
278
25
142
Eggerthia
2
122
Egibacter
1
Egicoccus
1
Ehrlichia
9
45
Eikenella
11
4
1
Eionea
1
Eisenbergiella
542
262
23
2
Eisenibacter
45
Ekhidna
1
Elizabethkingia
20
6
Elstera
2
Elusimicrobium
7
29
1
Emcibacter
49
Empedobacter
8
1
Emticicia
69
2
114
Enchytraeus
1
Endobacter
1
Endomicrobium
1
Endozoicomonas
1
Enhydrobacter
1
Enorma
34
46
3
Ensifer
1
1
Enterococcus
151
63
29
146
Enterorhabdus
282
127
7
4
Enterovibrio
1
Entomoplasma
12
9
Epibacterium
1
Epulopiscium
63
4
1
Ercella
100
1
Ereboglobus
3
Eremococcus
10
2
Erinaceus
1
Erwinia
1
72
1
62
Erysipelatoclostridium
798
373
36
9
Erysipelothrix
229
3
129
Erythrobacter
8
29
Escherichia
1
16
10
127
Ethanoligenens
298
87
Eubacterium
168
361
39
173
Eucorethra
1
Eudoraea
32
Euglena
1
Euryhalocaulis
7
Euzebya
14
85
Euzebyella
1
Exiguobacterium
14
8
Extensimonas
1
Ezakiella
21
1
Fabibacter
5
Facklamia
56
274
23
Faecalibacterium
816
361
37
181
Faecalibaculum
1
Faecalicatena Sakamoto et al. 2017
22
Faecalicoccus
234
4
2
Faecalitalea
46
19
8
Falcatimonas
1
15
Falsiporphyromonas
109
Fangia
14
Fastidiosipila
80
29
2
3
Fenollaria
197
5
1
Fergusonia
1
5
Fermentimonas
4
Ferrimicrobium
2
3
Ferrimonas
23
2
Ferrithrix
69
Ferrovibrio
2
Ferrovum Johnson et al. 2014
1
Ferruginibacter
1
29
Fervidibacterium
8
Fervidicella
4
Fibrella
3
Fibrobacter
96
70
16
Fictibacillus
18
4
Filifactor
2
124
19
60
Filimonas
1
4
Fimbriimonas
15
2
Finegoldia
471
268
6
93
Fischerella
1
Flagellimonas
1
Flammeovirga
21
48
Flavicella
4
Flaviflexus
8
3
Flavihumibacter
2
Flavisolibacter
1
1
8
Flavitalea
1
5
Flavivirga
1
Flavobacterium
428
22
12
Flavonifractor
812
361
33
10
Flectobacillus
40
Flexibacter
1
2
2
Flexistipes
22
1
Flexithrix
6
Flexivirga
1
Flintibacter
26
Fluoribacter
1
Fluviicola
14
3
1
Fluviimonas
132
Fodinibius
2
Fodinicurvata
164
1
Fontibacter
6
Fonticella
2
39
Formosa
5
Fournierella
1
16
Francisella
18
10
Franconibacter
3
Frankia
4
Frateuria
1
1
Fremyella
2
Fretibacter
12
Fretibacterium
103
1
Friedmanniella
9
5
Frigoribacterium
1
1
Frischella
1
3
Frondicola
1
Fructobacillus
15
13
Fuchsiella
3
Fucophilus
1
Fulvitalea
30
Fulvivirga
39
Fusibacter
75
12
Fusicatenibacter
796
357
18
1
Fusobacterium
140
163
4
65
Gabonibacter
10
Gaetbulibacter
1
Gaiella
2
19
Galenea
14
Gallaecimonas
3
Gallibacterium
1
15
5
Gallicola
76
28
1
Gallionella
14
21
Garciella
4
Gardnerella
43
40
2
9
Garritya
2
Gelria
228
1
Gemella
184
179
4
145
Geminicoccus
1
17
Geminocystis
1
Gemmata
1
4
4
Gemmatimonas
11
2
Gemmatirosa
2
1
Gemmiger
323
18
Geoalkalibacter
1
Geobacillus
6
20
12
60
Geobacter
17
13
Geodermatophilus
6
2
Geofilum
23
Geopsychrobacter
3
Georgenia
9
3
Geosporobacter
4
Geothermobacter
1
Geothrix
129
80
Geovibrio
1
7
Gibbsiella
4
Giesbergeria
1
1
Gilliamella
1
Gillichthys
1
Gillisia
12
90
Gilvimarinus
1
Gimesia
2
Glaciecola
35
31
Glaciimonas
2
Glaesserella
1
Globicatella
2
12
Gloeobacter
5
1
Gluconacetobacter
6
1
Gluconobacter
1
28
Glutamicibacter
28
Glycera
1
Glycocaulis
1
1
Glycomyces
7
15
Gorbachella
1
1
Gordonia
4
31
6
Gordonibacter
479
212
26
6
Gottschalkia
53
4
Gracilibacillus
44
Gracilibacter
3
175
3
Gracilimonas
108
Gramella
3
31
Granulibacter
4
Granulicatella
360
29
68
Granulicella
5
7
Granulosicoccus
32
1
Gryllotalpicola
4
1
Guggenheimella
137
Gullanella
2
Gymnocintractia
1
Gynuella
17
1
Haematobacter
3
3
Haematospirillum
2
Haemophilus
571
277
16
128
Hafnia
12
1
Hahella
71
18
Halanaerobacter
1
3
Halanaerobaculum
2
Halanaerobium
2
27
Halarsenatibacter
29
Haliangium
1
14
11
Haliea
1
6
Halioglobus
1
1
Haliscomenobacter
30
3
Halobacillus
11
4
Halobacteriovorax
18
4
Halobacteroides
3
1
Halocella
5
4
Halochromatium
80
18
Halodesulfovibrio
3
Haloferax
1
Haloferula
14
Halolactibacillus
4
Halomicronema
1
3
Halomonas
1
162
1
35
Halonatronum
2
Haloplasma
1
9
Halopolyspora
55
Halorhodospira
21
10
Halorubrobacterium
1
Halospina
7
Halospirulina
1
Halotalea
1
Halothermothrix
56
1
Halothiobacillus
17
2
Halyseosphaera
1
Hartmannibacter
1
Hathewaya
202
Hazenella
10
Helcococcus
22
57
20
Heleococcum
1
Helicobacter
4
13
59
Heliimonas
3
Heliobacterium
3
1
Heliomonas
1
Heliophilum
5
Heliorestis
3
65
Heliothrix
1
Hellea
4
Henriciella
158
Heratemis
1
Herbaspirillum
270
21
13
74
Herbinix
135
6
4
Herminiimonas
73
8
Herpetosiphon
3
Hespellia
523
345
16
Hippea
1
1
Hirschia
1
Histophilus
4
1
Hoeflea
1
Holdemanella
219
4
3
Holdemania
602
314
23
153
Holophaga
1
Hoppeia
2
Howardella
134
250
4
Hoyosella
14
Hugenholtzia
12
Humibacter
7
Hungateiclostridium
4
Hungatella
338
34
5
Hwangdonia
6
Hydrocarboniphaga
1
116
Hydrocoleum
1
Hydrogenibacillus
31
5
Hydrogenispora
194
Hydrogenoanaerobacterium
240
312
Hydrogenobaculum
4
Hydrogenophaga
1
2
1
Hydrogenophilus
3
72
63
Hydrogenothermus
5
Hydrotalea
1
12
Hymenobacter
3
15
113
Hyphomicrobium
2
5
18
Hyphomonas
2
21
Iamia
1
2
Ianmoorea
3
Icaria
1
Ichthyobacterium
1
Ideonella
2
Idiomarina
4
14
Ignatzschineria
5
Ignavibacterium
19
18
Ignavigranum
2
38
Ihubacter
29
Ileibacterium
3
Ilumatobacter
33
Ilyobacter
4
Immundisolibacter
3
Imperialibacter
14
Indibacter
9
Indioceanicola
3
Inquilinus
5
2
Insolitispirillum
95
Intestinibacillus
9
Intestinibacter
814
316
21
1
Intestinimonas
762
351
37
11
Iodobacter
1
3
Isochromatium
2
Janibacter
2
1
2
Jannaschia
1
1
Janthinobacterium
4
6
Jatropha
1
Jatrophihabitans
2
1
Jeotgalibaca
3
Jeotgalibacillus
2
Jeotgalicoccus
2
22
3
Jiangella
1
5
Johnsonella
17
259
153
Jonesia
29
1
Jonquetella
11
42
2
Kaistia
16
2
Kallipyga
28
1
1
Kallotenue
7
Kandleria
60
Kangiella
16
1
Kastovskya
3
Keratinibaculum
4
Ketobacter
1
Ketogulonicigenium
1
Kiloniella
19
3
Kineococcus
3
1
Kineosporia
2
Kinetoplastibacterium
3
Kingella
12
2
2
Kistimonas
1
Kitasatospora
2
12
Klebsiella
157
31
7
58
Kluyvera
573
3
5
Kockovaella
1
Kocuria
14
12
11
Komagataeibacter
13
2
Kordia
1
Kordiimonas
2
Koreibacter
2
Kosakonia
88
3
Kosmotoga
1
4
Kozakia
1
3
Krassilnikovia
1
Kribbella
92
11
Kushneria
1
3
39
Kutzneria
1
Kyrpidia
51
1
Kytococcus
2
1
Labilibacter
2
Labilithrix
24
Labrenzia
1
Laceyella
4
18
Lachnoanaerobaculum
23
351
4
Lachnobacterium
13
261
29
146
Lachnoclostridium
361
39
9
Lachnospira
754
333
35
177
Lachnotalea
3
Lacibacter
3
2
Lacibacterium
46
Lacihabitans
4
Lacimicrobium
1
Lacinutrix
1
3
Lactobacillus
616
347
21
157
Lactococcus
284
207
10
84
Lactonifactor
503
247
29
Lacunisphaera
3
Lamprocystis
2
Laribacter
1
3
Lautropia
20
17
3
Lawsonella
1
Lawsonia
212
4
Lebetimonas
6
Lecanora
1
Legionella
1
21
108
Leifsonia
2
1
1
Leisingera
1
Lelliottia
4
Leminorella
1
Lentibacillus
25
32
Lentisphaera
3
Lentzea
3
Leptolinea
32
Leptolyngbya
2
1
40
Leptonema
6
Leptospira
6
64
Leptospirillum
9
1
Leptothrix
34
Leptotrichia
43
21
9
Leucobacter
19
5
Leuconostoc
87
266
4
85
Leucothrix
2
8
Levilinea
1
Levyella
151
1
Lewinella
7
16
Libanicoccus
1
1
Liberibacter
6
1
Limibacillus
8
Limibacter
2
Limimonas
3
Limisphaera
2
Limnobacter
1
14
109
Limnobaculum
1
Limnochorda
2
1
Limnohabitans
2
2
Limnoraphis
2
Lishizhenia
1
Listeria
1
121
46
Litoribacillus
38
Litoribacter
9
Litoribrevibacter
5
Litoricola
20
6
Litorilinea
5
Litorilituus
32
4
Loktanella
5
1
Longilinea
1
Longimonas
26
Lucinoma
1
Ludwigia
1
Luminiphilus
27
Luna cluster
1
3
Luteibacter
1
29
92
Luteibaculum
1
Luteimonas
4
6
Luteipulveratus
1
Luteitalea
1
Luteivirga
4
Luteococcus
5
Luteolibacter
1
12
80
Lutibacter
1
13
4
Lutispora
87
1
Lutra
1
Lyme Disease Borrelia
3
Lysinibacillus
9
6
31
Lysinimonas
1
Lysobacter
2
38
36
MAC
2
Macrococcus
1
5
78
Madoqua
1
Mageeibacillus
1
Magnetococcus
6
1
Magnetospira
3
1
Magnetospirillum
3
2
Magnetovibrio
2
Mahella
7
Malassezia
2
Maledivibacter
15
Mangrovibacter
1
Mangroviflexus
2
Mannheimia
8
34
63
Maribacter
1
5
Maricaulis
8
Marichromatium
1
6
32
Marinicauda
1
Marinicella
7
Marinifilum
94
Mariniflexile
3
4
Marinilabilia
18
1
Marinilactibacillus
4
Marinimicrobium
1
Marininema
1
Mariniphaga
14
Mariniradius
7
Marinitalea Kim et al. 2011
1
Marinithermofilum
2
Marinithermus
1
Marinitoga
1
6
Marinobacter
73
11
Marinobacterium
19
4
Marinococcus
4
11
Marinomonas
17
5
Marinoscillum
14
Marinospirillum
20
33
Marinovum
1
Mariprofundus
10
1
Marispirillum
32
Maritalea
1
Maritimibacter
1
Marivirga
2
1
Marivivens
1
Marixanthomonas
11
Marmoricola
8
1
Marseillibacter
1
36
Martelella
2
Marvinbryantia
634
329
3
5
Massilia
7
10
20
4
Massilioclostridium
1
24
Massiliprevotella
3
Mechercharimyces
7
2
Mediterranea
3
Megamonas
66
108
2
30
Meganema
14
Megasphaera
563
223
148
Meiothermus
1
9
78
Meiracyllium
1
Melaminivora
1
Melghiribacillus
3
Melghirimyces
17
Melioribacter
253
11
4
Melissococcus
1
6
Melitea
1
Melittangium
4
1
Meniscus
14
Merdibacter
1
7
Mesoaciditoga
1
Mesoflavibacter
1
Mesonia
6
Mesoplasma
11
89
Mesorhizobium
10
4
4
Mesotoga
1
Metabacterium
1
2
Metakosakonia
1
Metallibacterium
1
Metallosphaera
5
Metaprevotella
3
Methanobrevibacter
227
93
4
67
Methanocorpusculum
1
1
Methanolinea
1
Methanomassiliicoccus
26
17
Methanomethylophilus
23
Methanosphaera
40
13
2
13
Methylacidimicrobium van Teeseling et al. 2014
1
Methylarcula
12
Methylibium
3
Methylobacillus
44
67
Methylobacter
4
Methylobacterium
9
18
23
Methylocaldum
2
4
Methyloceanibacter
1
Methylocella
4
8
Methylococcus
1
Methylocystis
5
2
Methylogaea
1
26
Methyloglobulus
28
Methylohalobius
8
Methylohalomonas
4
Methyloligella
2
Methylomagnum
4
Methylomarinovum
7
Methylomicrobium
4
3
Methylomonas
6
3
Methylomusa
4
Methylonatrum
2
92
Methyloparacoccus
2
Methylophaga
64
8
Methylophilus
11
Methylorubrum
4
Methylosinus
6
Methylosoma
1
Methylosphaera
4
Methylotenera
33
3
Methylothermus
1
Methyloversatilis
33
7
Methylovulum
1
Micavibrio
3
Microaerobacter
13
Microbacter
81
Microbacterium
11
88
41
Microbulbifer
6
Micrococcus
10
1
3
Microcoleus
24
Microcystis
4
Microlunatus
20
1
Micromonospora
2
12
Micropruina
1
1
Microscilla
1
Microterricola
4
Microtetraspora
1
2
Microthrix
1
Microvirga
1
4
1
Microvirgula
2
Millisia
1
Miniimonas
1
Mitsuaria
3
Mitsuokella
18
37
3
74
Mixta
1
Mizugakiibacter
7
Mobilitalea
55
2
Mobiluncus
129
124
1
24
Modestobacter
2
39
Modicisalibacter
1
Mogibacterium
529
262
1
145
Moheibacter
10
Mongoliicoccus
8
Mongoliitalea
1
Monoglobus
4
Moorea
29
2
Mooreia
2
Moorella
12
127
Moraxella
14
105
5
Mordavella
1
6
4
Morganella
4
70
20
Moritella
1
1
Moryella
697
293
4
23
Mucilaginibacter
21
5
4
Mucinivorans
22
1
Mucispirillum
3
1
Murdochiella
246
1
4
Muribaculum
4
Muricauda
1
8
Muriicola
1
Murimonas
334
3
Myceligenerans
6
Mycobacterium
32
19
51
Mycobacterium chelonae complex
2
Mycobacterium complex
2
Mycobacterium fortuitum complex
3
Mycoplana
1
Mycoplasma
9
233
1
132
Myroides
10
6
Myxobotrys
1
11
Myxococcus
1
Nafulsella
6
Nakamurella
2
3
Nannocystis
9
8
Nanoscypha
1
Natranaerobaculum
2
Natranaerobius
9
1
Natranaerovirga
231
7
Natribacillus
1
Natroniella
3
Natronincola
36
135
Naumannella
7
Nautilia
4
1
Ndongobacter
1
Necropsobacter
7
Negativibacillus
1
29
1
Negativicoccus
131
100
54
Neglecta
1
Neisseria
81
21
11
25
Neoasaia
1
1
Neochlamydia
1
Neorhizobium
4
Neorickettsia
2
6
Neoscardovia
27
Neptuniibacter
2
Neptunomonas
1
Nereis
1
Nesterenkonia
41
6
Nevskia
1
3
8
Niabella
1
263
38
Niastella
1
3
1
Nibribacter
24
Nicoletella
4
Nigella
1
Nisaea
10
Nitratifractor
1
Nitratireductor
4
Nitratiruptor
1
1
Nitriliruptor
5
Nitrincola
1
Nitrobacter
3
1
Nitrococcus
13
Nitrolancea
4
Nitrosococcus
1
15
28
Nitrosomonas
2
122
5
3
Nitrosopumilus
1
Nitrososphaera
1
Nitrosospira
1
3
Nitrospina
2
Nitrospira
1
2
Nitrospirillum
3
1
Niveispirillum
83
1
Nocardia
3
4
Nocardioides
3
38
4
Nocardiopsis
16
5
Nodularia
1
21
Nonomuraea
13
22
Nosocomiicoccus
6
Novibacillus
8
4
Noviherbaspirillum
10
Novispirillum
51
83
Novosphingobium
7
16
5
Oblitimonas
1
Oceanibaculum
1
Oceanibulbus
1
3
Oceanicoccus
23
1
Oceanimonas
2
1
Oceanirhabdus
3
Oceanithermus
1
Oceanobacillus
13
4
Oceanobacter
1
Oceanospirillum
27
3
Oceanotoga
1
Ochrobactrum
28
3
15
Octadecabacter
1
3
Odoribacter
619
308
33
158
Oenococcus
35
38
Oerskovia
1
Ohtaekwangia
28
Okeania
2
Oleibacter
3
Oleiphilus
3
Oleispira
1
Oleomonas
10
Oligella
8
10
13
Oligosphaera
14
Oligotropha
1
Olivibacter
3
121
Olleya
4
Olsenella
62
183
9
18
Opitutus
1
4
5
Orbus
2
Orenia
19
Oribacterium
41
356
28
135
Orientia
42
1
Ornatilinea
3
Ornithinicoccus
1
2
Ornithinimicrobium
4
Ornithobacterium
3
4
Orrella
1
Oscillatoria
36
Oscillibacter
739
360
38
13
Oscillospira
622
1
32
171
Osmadenia
1
Otariodibacter
9
Ottowia
3
Owenweeksia
1
1
Oxalicibacterium
40
Oxalobacter
117
8
87
Oxalophagus
1
18
Oxobacter
5
98
Oxynema
2
Paenalcaligenes
1
1
Paenarthrobacter
1
1
Paenibacillus
1
294
13
70
Paeniclostridium
40
4
Paeniglutamicibacter
1
Paenisporosarcina
22
4
Pagothenia
1
Paludibacter
40
3
6
Paludibacterium
2
Paludibaculum
5
Paludisphaera
3
Panacagrimonas
2
Pandoraea
12
5
Pannonibacter
4
Panonychus
1
Pantoea
187
55
1
12
Papillibacter
417
190
29
Parabacteroides
759
371
37
181
Paraburkholderia
28
1
4
Parachlamydia
1
1
Paraclostridium
21
Paracoccus
1
18
8
Paraeggerthella
15
42
Parafilimonas
25
Parageobacillus
4
1
Paraglaciecola
5
1
Paraliobacillus
3
Parapedobacter
10
62
Paraperlucidibaca
1
Paraphotobacterium
1
Paraprevotella
212
310
8
127
Pararhodospirillum
1
1
Parasaccharibacter
1
1
Parascardovia
4
3
49
Parasegetibacter
2
Parashewanella
1
Parasporobacterium
169
161
17
Parasutterella
594
345
24
6
Parolsenella
1
Parvibacter
93
24
1
Parvibaculum
1
Parvimonas
95
73
5
Parvularcula
6
1
Pasteurella
20
9
14
Pasteuria
8
Patulibacter
2
1
Paucibacter
2
6
Paucimonas
2
Pectinatus
55
1
123
Pectobacterium
3
25
4
Pediococcus
33
40
103
Pedobacter
4
131
23
156
Pedomicrobium
1
1
2
Pelagibaca
1
Pelagibacterium
1
Pelagibius
2
Pelagicoccus
27
46
Pelistega
1
2
Pelobacter
18
8
Pelodictyon
1
Pelolinea
3
1
Pelomonas
20
4
2
Pelosinus
102
4
Pelospora
22
Pelotomaculum
36
68
Peptoanaerobacter
14
Peptoclostridium
662
57
1
Peptococcus
406
153
5
150
Peptoniphilus
438
300
6
154
Peptostreptococcus
205
154
2
43
Perameles
1
Peredibacter
4
Perexilibacter
18
Perlucidibaca
3
Permianibacter
20
Persephonella
1
Persicirhabdus
9
Persicitalea
23
Persicobacter
4
4
Petrimonas
10
4
Petrotoga
2
Phaeobacter
8
Phaeobacterium
6
Phaeochromatium
6
Phaeocystidibacter
7
Phaeodactylibacter
8
Phascolarctobacterium
553
325
19
165
Phaseolibacter
2
Phenylobacterium
2
11
11
Phocaeicola
1
91
Phocea
11
Phoenicibacter
1
Photobacterium
1
11
Photorhabdus
44
4
Phreatobacter
1
1
Phycicoccus
1
Phycisphaera
2
1
Phyllobacterium
30
1
Phytoactinopolyspora
1
Phytomonospora
15
Pigmentiphaga
14
Pilibacter
12
Pilimelia
1
6
Pimelobacter
3
Pirellula
9
Pisciglobus
14
Piscinibacter
3
Piscirickettsia
8
1
Planctopirus
1
1
plane trees
1
Planifilum
1
7
94
Planktomarina
2
Planktophila
1
2
Planktothrix
3
Planococcus
30
34
Planomicrobium
36
3
5
Plantibacter
1
1
Plasticicumulans
60
Pleionea
1
Pleomorphomonas
4
1
Plesiocystis
3
Pleurocapsa
1
Pleuronectes
1
Pluralibacter
16
4
Polaribacter
1
8
Polaromonas
1
5
Polycladomyces
19
Polymonas
1
8
Polymorphobacter
2
Polymorphum
2
Polynucleibacter
30
Pontibacillus
72
49
Pontibacter
1
7
69
Ponticaulis
2
Pontivivens
1
Porphyrobacter
1
1
1
Porphyromonas
364
301
15
153
Portibacter
1
Porticoccus
1
Portiera
1
Povalibacter
1
Pragia
114
4
Prauserella
2
Prevotella
478
373
23
176
Prochlorococcus
2
5
Prochlorothrix
1
Prognathochromis
1
Prolixibacter
3
Promicromonospora
1
3
Propionibacterium
120
14
9
10
Propionicimonas
1
3
Propioniferax
3
70
Propionigenium
3
6
Propionimicrobium
11
Propionispira
2
14
Propionispora
31
113
Propionivibrio
2
16
8
Prosthecobacter
13
39
Prosthecochloris
1
4
Proteiniborus
91
Proteiniclasticum
1
Proteiniphilum
40
13
4
Proteinivorax
35
Proteocatella
66
3
Proteus
17
45
1
10
Protochlamydia
1
Providencia
77
12
Pseudacidovorax
2
Pseudaeromonas
18
Pseudaminobacter
1
Pseudanabaena
4
Pseudarcicella
23
1
Pseudarthrobacter
1
Pseudoalteromonas
11
Pseudobacteroides
8
Pseudobutyrivibrio
830
221
27
149
Pseudochrobactrum
1
5
2
Pseudoclavibacter
53
132
8
Pseudoclostridium
4
Pseudodesulfovibrio
4
Pseudoduganella
6
Pseudoflavitalea
4
Pseudoflavonifractor
497
320
31
5
Pseudofulvibacter
1
Pseudofulvimonas
1
Pseudoglutamicibacter
6
Pseudohongiella
4
2
Pseudokineococcus
4
Pseudolabrys
1
pseudomallei group
4
Pseudomaricurvus
2
Pseudomonas
70
167
4
49
Pseudomonas chlororaphis group
4
Pseudonocardia
9
7
Pseudopedobacter
91
1
1
Pseudopropionibacterium
6
1
Pseudoramibacter
3
49
64
Pseudorhodobacter
45
Pseudorhodoferax
1
Pseudorhodoplanes
1
Pseudoscardovia
232
Pseudoscillatoria
164
Pseudospirillum
1
Pseudothermotoga
4
Pseudovibrio
2
1
Pseudoxanthobacter
2
Pseudoxanthomonas
6
22
4
Psychrilyobacter
10
Psychrobacter
2
65
73
Psychroflexus
17
18
Psychromicrobium
1
Psychromonas
13
7
Psychroserpens
2
1
Psychrosinus
9
Psychrosphaera
2
Pullulanibacillus
49
2
Puniceicoccus
44
18
Pusillimonas
3
1
Pyramidobacter
50
14
Pyrenomonas
1
Pyrinomonas
19
Pyxicoccus Reichenbach 2005
1
Qipengyuania
1
Quadrisphaera
1
Rahnella
11
1
Ralstonia
16
6
12
Ramlibacter
3
2
Raoultella
32
5
Raoultibacter
11
Raphidiopsis
3
Rapidithrix
6
Rarobacter
25
Rathayibacter
2
2
Rehaibacterium
2
Reichenbachiella
6
Reinekea
75
Renobacter
4
Reyranella
6
Rhabdochromatium
8
Rheinheimera
4
34
2
Rhizobacter
6
Rhizobium
13
19
5
5
Rhizomicrobium
8
Rhodanobacter
24
1
Rhodobaca
1
Rhodobacter
4
2
25
Rhodococcus
23
2
20
Rhodocyclus
1
Rhodocytophaga
1
20
Rhodoferax
2
12
Rhodoluna
3
Rhodomicrobium
3
1
Rhodonellum
14
Rhodopirellula
1
1
Rhodoplanes
1
1
8
Rhodopseudomonas
5
9
3
Rhodospira
4
Rhodospirillum
1
2
76
Rhodothalassium
9
4
Rhodothermus
2
136
Rhodovibrio
12
32
Rhodovulum
3
17
4
Rickettsia
72
97
Rickettsiella
8
Riemerella
3
3
Rikenella
2
2
9
Risungbinella
10
Rivibacter
1
Rivicola
3
Rivularia
17
Robiginitalea
1
1
Robiginitomaculum
3
Robinsoniella
180
286
33
Rodentibacter
1
Romboutsia
546
317
3
1
Roseateles
3
1
Roseburia
834
361
39
179
Roseiarcus
3
Roseibacterium
1
1
Roseiflexus
7
1
Roseimarinus
4
Roseimicrobium
17
Roseitalea
1
Roseivirga
25
Roseivivax
2
Rosenbergiella
74
Roseobacter
3
Roseococcus
1
7
6
Roseomonas
4
7
23
Roseospira
5
18
Roseovarius
1
2
3
Rothia
158
10
24
56
Rubellimicrobium
3
8
4
Rubidibacter
2
Rubidimonas
26
Rubinisphaera
3
Rubribacterium
1
Rubritalea
66
59
Rubritepida
1
Rubrivivax
2
2
Rubrobacter
1
19
4
Rudaea
3
Rudanella
2
Ruegeria
1
Rufibacter
20
4
Ruminiclostridium
34
361
38
10
Ruminobacter
30
1
Ruminococcus
347
39
181
Rummeliibacillus
1
20
1
Runella
37
64
Ruthenibacterium
1
33
5
Saccharibacillus
9
Saccharibacter
6
Saccharicrinis
30
Saccharimonas
20
Saccharofermentans
70
2
Saccharomonospora
77
1
Saccharophagus
1
Saccharopolyspora
26
59
Saccharospirillum
5
Saccharothrix
1
1
Sagittula
1
Saguinus
1
Salegentibacter
4
Salibacterium
4
Salimicrobium
11
3
Salinibacillus
9
Salinibacter
1
Salinibacterium
1
Salinicoccus
36
81
Salinicola
1
1
Salinimicrobium
1
1
Salinimonas
4
Salinisphaera
11
1
Salinispira
4
Salinispirillum
78
Salinivenus
1
Salinivibrio
16
2
Salinivirga
1
Salipiger
1
Salisaeta
31
32
Salmonella
4
5
20
35
Sambucus
1
Sandaracinobacter
1
Sandaracinus
4
1
Sanguibacter
1
1
Saprospira
1
Sarcina
807
102
Scardovia
9
19
11
Schaalia
4
Schlegelella
3
2
2
Schleiferia
8
Schlesneria
1
Schumannella
1
Schwartzia
5
Scytonema
4
Sebaldella
1
22
Sedimentibacter
2
81
150
Sedimenticola
7
3
Sedimentisphaera
3
Sedimentitalea
1
Sediminibacillus
1
Sediminibacterium
1
13
Sediminicola
1
Sediminispirochaeta
1
Sediminitomix
34
Segetibacter
21
23
Segniliparus
13
1
Seinonella
6
Selenihalanaerobacter
28
Selenomonas
23
48
8
147
Sellimonas
1
Seminibacterium
1
Senegalimassilia
229
132
14
2
Seonamhaeicola
3
Serinibacter
1
Serinicoccus
7
3
Serpentinomonas
2
Serpula Stanton et al. 1991
14
19
Serratia
8
53
3
124
Sharpea
7
66
Shewanella
56
106
Shigella
1
135
6
Shimazuella
1
6
Shimia
1
Shimwellia
1
Shinella
6
4
3
Shivajiella
1
Shuttleworthia
261
253
108
Siansivirga
1
3
Sideroxydans
1
Silanimonas
13
Silicimonas
1
Simiduia
10
1
Simkania
6
1
Simonsiella
3
Simplicispira
3
Singulisphaera
1
3
4
Sinibacillus
28
Sinobaca
1
Sinobacterium
43
Sinomonas
5
1
Sinorhizobium
5
Sinorhizobium fredii group
4
Sinorhizobium/Ensifer group
1
4
Sinosporangium
4
Siphonobacter
15
Skermanella
1
19
70
Slackia
273
211
19
140
Smithella
3
1
Sneathia
9
35
4
Sneathiella
3
Snodgrassella
1
Snowella
5
Sodalis
4
Soehngenia
1
5
Solimonas
4
Solirubrobacter
1
10
4
Solitalea
15
1
Solobacterium
103
51
2
3
Sorangium
2
1
4
Sphaerimonospora
3
Sphaerobacter
2
Sphaerochaeta
1
Sphaerospermopsis
1
Sphingobacterium
4
72
3
156
Sphingobium
8
27
17
Sphingomicrobium
5
Sphingomonas
24
190
14
26
Sphingopyxis
3
11
4
Sphingorhabdus
2
1
Sphingosinicella
1
4
Spiribacter
8
4
Spirilliplanes
2
Spirillum
14
Spirochaeta
13
Spiroplasma
145
4
Spirosoma
4
5
Spirulina
3
Spongitalea
1
Sporacetigenium
57
Sporanaerobacter
6
1
4
Sporichthya
6
2
Sporisorium
1
Sporobacter
429
332
11
Sporobacterium
1
223
1
Sporocytophaga
2
Sporohalobacter
6
Sporolactobacillus
3
36
Sporomusa
77
Sporosalibacterium
21
Sporosarcina
293
23
24
Sporotomaculum
69
84
Stackebrandtia
52
1
Stanieria
1
Staphylococcus
232
83
2
70
Stappia
1
Starria
36
Stella
74
Stenotrophomonas
30
17
23
Stenoxybacter
3
Steroidobacter
8
1
Sterolibacterium
4
Stigmatella
11
1
Stomatobaculum
18
149
2
Streptacidiphilus
4
Streptobacillus
2
26
3
Streptococcus
829
355
39
178
Streptohalobacillus
3
Streptomonospora
99
Streptomyces
72
2
42
Streptosporangium
4
5
Subdoligranulum
825
359
22
6
Subsaximicrobium
1
Succinatimonas
6
28
Succiniclasticum
37
91
5
11
Succinimonas
31
Succinispira
43
Succinivibrio Bryant and Small 1956
9
45
48
Sufflavibacter
1
Sulcia
1
2
Sulfobacillus
14
13
Sulfuricaulis
3
Sulfuricella
1
Sulfuricurvum
3
Sulfuriferula
2
Sulfuriflexus
1
Sulfurifustis
3
1
Sulfurihydrogenibium
1
Sulfurimonas
1
1
Sulfurisoma
2
Sulfuritalea
1
Sulfurivirga
7
Sulfurovum
1
1
Sungkyunkwania
1
Sunxiuqinia
22
Sutterella
553
348
30
180
Suttonella
9
Swaminathania
1
Symbiobacterium
6
104
Symploca
3
Synechococcus
3
3
Synergistes
15
4
4
Syntrophaceticus
17
Syntrophobacter
6
2
Syntrophobotulus
6
1
Syntrophococcus
31
223
11
Syntrophomonas
3
151
31
Syntrophorhabdus
13
Syntrophothermus
17
1
Syntrophus
11
3
Taeniopygia
1
Taibaiella
1
26
Tamilnaduibacter
11
Tamlana
2
1
Tangfeifania
6
Tannerella
11
131
6
Tanticharoenia
1
Taonella
1
Tapinothrix
6
Tardiphaga
1
Tateyamaria
1
Tatumella
2
1
Taylorella
4
1
Telmatocola
1
Telmatospirillum
14
11
Temperatibacter
1
Tenacibaculum
3
27
Tenuibacillus
4
Tepidamorphus
1
Tepidanaerobacter
8
69
Tepidibacillus
25
Tepidibacter
45
51
Tepidimicrobium
137
1
14
Tepidimonas
13
14
1
Terasakiella
1
Terasakiispira
2
Teredinibacter
1
Terrabacter
1
Terracoccus
1
Terribacillus
13
1
3
Terriglobus
3
4
Terrimonas
19
Terrisporobacter
636
291
6
2
Tessaracoccus
24
64
1
Tetragenococcus
2
43
96
Tetrasphaera
6
Texcoconibacillus
55
Thalassococcus
3
Thalassolituus
1
Thalassomonas
7
Thalassospira
390
3
37
Thalassotalea
35
1
Thauera
29
29
Thermacetogenium
8
1
Thermaerobacter
17
4
Thermanaeromonas
1
3
Thermanaerothrix Gregoire et al. 2011
1
Thermanaerovibrio
1
1
Thermasporomyces
7
Thermicanus
1
180
128
Thermincola
1
13
3
Thermoactinomyces
71
7
Thermoanaerobacter
13
53
Thermoanaerobacterium
3
28
Thermoanaerobaculum
36
Thermobacillus
5
7
Thermobaculum
35
36
Thermobifida
1
Thermobispora
3
1
Thermoclostridium
4
Thermococcus
2
Thermocrinis
3
1
Thermodesulfatator
1
27
Thermodesulfobacterium
1
Thermodesulfobium
6
2
1
Thermodesulforhabdus
17
Thermodesulfovibrio
5
26
Thermoflexibacter
45
Thermogemmatispora
5
13
Thermogutta
11
1
Thermogymnomonas
9
Thermohalobacter
8
Thermohydrogenium
14
Thermoleophilum
18
Thermolithobacter
17
Thermolongibacillus
26
Thermomarinilinea
11
Thermomicrobium
1
Thermomonas
5
1
1
Thermomonospora
3
Thermonema
9
Thermophagus
31
Thermosediminibacter
11
1
Thermosinus
1
Thermosipho
3
Thermosporothrix
2
Thermosulfidibacter
2
Thermosynechococcus
1
Thermosyntropha
3
Thermotoga
1
Thermotomaculum
5
Thermovenabulum
12
25
Thermovibrio
1
Thermovirga
3
Thermovorax
2
Thermus
13
27
Thioalbus
1
Thioalkalicoccus
5
Thioalkalimicrobium
1
31
21
Thioalkalispira
4
Thioalkalivibrio
18
25
Thiobacillus
1
13
25
Thiobacter
2
Thiocapsa
35
62
Thioclava
1
1
Thiococcus
1
Thiocystis
20
2
Thiofaba
1
Thioflavicoccus
1
Thiohalobacter
1
Thiohalocapsa
36
Thiohalomonas
3
Thiohalophilus
1
Thiohalorhabdus
56
89
Thiohalospira
4
Thiolamprovum
121
Thiolapillus
1
Thiomonas
1
92
43
Thiophaeococcus
6
Thioploca
3
Thioprofundum
4
Thioreductor
3
Thiorhodococcus
8
29
Thiorhodospira
2
6
Thiorhodovibrio
24
Thiothrix
1
34
113
Thiovirga
13
1
Thlaspi
1
Thorsellia
34
Tigriopus
1
Tilapia
1
Tindallia
51
141
Tissierella
30
Tistrella
15
1
Tolumonas
2
45
Tomitella
7
Tomopterna
1
Tonsillophilus
1
Trabulsiella
31
Tranquillimonas
1
Traorella
1
Treponema
1
24
48
Trichococcus
6
5
9
Trichocoleus
2
Trichodesmium
13
Trichormus
1
Tropheryma
24
1
Truepera
1
9
Trueperella
7
7
4
Tsukamurella
1
2
25
Tuberibacillus
6
Tumebacillus
13
1
Tunicatimonas
19
Turicella
3
5
Turicibacter
501
224
10
140
Turneriella
5
Tychonema
112
Tyzzerella
361
36
5
Udeniomyces
1
Uliginosibacterium
42
15
Umboniibacter
1
unclassified Erysipelotrichaceae
4
unclassified Ruminococcaceae
4
Undibacterium
5
8
3
Ureaplasma
10
12
8
Ureibacillus
22
6
Ursidibacter
16
Vagococcus
9
21
68
Vallitalea
31
3
Vampirococcus
1
Vampirovibrio
10
1
Varibaculum
273
116
5
32
Variibacter
1
3
Variovorax
1
3
1
9
Veillonella
580
296
25
167
Verminephrobacter
13
1
Verrucomicrobium
30
1
Verrucosispora
2
1
Verticiella
2
Vibrio
27
13
Vibrio harveyi clade
3
Victivallis
301
126
7
1
Virgibacillus
1
17
18
Viridibacillus
8
23
Vitreoscilla
16
2
Vogesella
13
10
Volucribacter
9
Vulcanibacillus
3
Vulcaniibacterium
8
Vulcanithermus
5
Waddlia
1
Websdanea
1
Weeksella
3
1
Weissella
34
243
4
95
Wenyingzhuangia
2
3
Wenzhouxiangella
18
1
Wigglesworthia
4
Woeseia
1
Wohlfahrtiimonas
2
Wolbachia
6
Xanthobacter
2
1
1
Xanthomonas
1
10
11
Xenophilus
1
Xenorhabdus
91
4
Xylanimicrobium
1
Xylanimonas
1
Xylella
5
Xylophilus
2
Yangia
4
Yaniella
1
Yersinia
7
10
2
12
Youngiibacter
56
Youngimonas
4
Zeaxanthinibacter
2
Zhihengliuella
1
1
Zhongshania
19
1
Zhouia
2
Zobellella
30
3
Zobellia
1
4
Zoogloea
2
6
Zopfius
2
Zymobacter
24
kingdom
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Thryve
SequentiaBioTech
XenoGene
Others
Zymomonas
1
1
Chlorobionta
21
Fungi
2
no rank
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Not yet classified (Prokaryotae)
224
1
[Clostridium] aminophilum DSM 10710
2
[Clostridium] bolteae 90A9
1
[Clostridium] cf. saccharolyticum K10
1
[Clostridium] citroniae WAL-17108
5
[Clostridium] clostridioforme 90A7
3
[Clostridium] clostridioforme 90A8
2
[Clostridium] innocuum 2959
4
[Clostridium] saccharogumia DSM 17460
3
[Clostridium] sphenoides JCM 1415
3
[Clostridium] spiroforme DSM 1552
1
[Clostridium] symbiosum WAL-14163
2
3
[Clostridium] ultunense Esp
1
[Eubacterium] cellulosolvens 6
1
[Eubacterium] siraeum DSM 15702
1
1
Absiella dolichum ATCC 29143
3
Accumulibacter
2
Acetobacterium sp. KB-1
1
Acinetobacter lwoffii WJ10621
1
Acinetobacter venetianus VE-C3
1
Actinobaculum sp. oral taxon 183 str. F0552
2
Actinomyces dentalis DSM 19115
1
Actinomyces graevenitzii F0530
2
Actinomyces johnsonii F0542
1
Actinomyces massiliensis 4401292
1
Actinomyces naeslundii Howell 279
3
Actinomyces oris K20
2
Actinoplanes teichomyceticus ATCC 31121
1
Aeromicrobium marinum DSM 15272
1
Aeromonas caviae Ae398
1
Aeromonas hydrophila 4AK4
1
Aeromonas salmonicida subsp. pectinolytica 34mel
1
Agathobaculum desmolans ATCC 43058
3
Aggregatibacter sp. oral taxon 458 str. W10330
1
Alcaligenaceae bacterium YIT 11859
4
Aliivibrio fischeri SR5
1
Alistipes onderdonkii DSM 19147
5
Alistipes putredinis DSM 17216
5
Alistipes senegalensis JC50
4
Alistipes sp. JC136
3
Allofustis seminis DSM 15817
1
Alloscardovia omnicolens F0580
2
Alteromonadales genera incertae sedis
1
Anabaena
2
Anaerostipes hadrus DSM 3319
1
Aneurinibacillus group
3
1
Angiospermae
21
Anoxybacillus kamchatkensis G10
1
ant endosymbionts
4
ant, tsetse, mealybug, aphid, etc. endosymbionts
1
2
aphid secondary symbionts
1
Aquiflexum balticum DSM 16537
1
Arcobacter cryaerophilus D2610
1
Arcobacter group
4
Arcobacter skirrowii CCUG 10374
1
ATCC 35035
3
ATCC 35423
1
2
ATCC 51140
3
Atopobium parvulum DNF00906
1
Auraticoccus monumenti
1
1
Bacillales Family XI. Incertae Sedis
207
142
Bacillales Family XII. Incertae Sedis
3
7
Bacillales incertae sedis
211
131
Bacillus amyloliquefaciens UMAF6639
1
Bacillus atrophaeus UCMB-5137
1
Bacillus cereus AH676
1
Bacillus cereus ATCC 4342
1
Bacillus cereus F
1
Bacillus cereus F65185
1
Bacillus cereus m1293
1
Bacillus cereus Rock3-44
1
Bacillus cereus Rock4-18
1
Bacillus cereus Rock4-2
1
Bacillus jeotgali
1
Bacillus megaterium NCT-2
1
Bacillus megaterium Q3
1
Bacillus simplex NBRC 15720 = DSM 1321
1
Bacillus thuringiensis LM1212
1
Bacillus thuringiensis serovar andalousiensis
1
Bacillus thuringiensis serovar andalousiensis BGSC 4AW1
1
Bacillus thuringiensis serovar huazhongensis
1
Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
1
Bacillus thuringiensis serovar pulsiensis
1
Bacteria candidate phyla
169
1
bacterium 84634
4
Bacteroides acidifaciens JCM 10556
2
Bacteroides caccae CL03T12C61
4
Bacteroides cellulosilyticus CL02T12C19
1
Bacteroides cellulosilyticus WH2
1
Bacteroides chinchillae JCM 16497
2
Bacteroides clarus DSM 22519
2
Bacteroides faecis JCM 16478
2
Bacteroides fluxus DSM 22534
1
Bacteroides fragilis str. 3397 T10
1
Bacteroides fragilis str. 3976T8
2
Bacteroides gallinarum DSM 18171
1
Bacteroides intestinalis 341
1
2
Bacteroides oleiciplenus DSM 22535
1
Bacteroides ovatus 3_8_47FAA
2
Bacteroides ovatus CL02T12C04
1
1
Bacteroides ovatus CL03T12C18
1
Bacteroides rodentium JCM 16496
4
Bacteroides salyersiae CL02T12C01
1
Bacteroides sartorii A-C2-0
2
Bacteroides sp. AP1
3
Bacteroides sp. CC31F
3
Bacteroides sp. JCM 17103
1
Bacteroides uniformis CL03T12C37
2
Bacteroides vulgatus str. 3775 SL(B) 10 (iv)
1
Bacteroides vulgatus str. 3975 RP4
2
Bacteroides xylanisolvens CL03T12C04
1
Barnesiella intestinihominis str. YIT 11860
1
2
Bifidobacterium adolescentis JCM 15918
2
Bifidobacterium longum subsp. longum 1-6B
1
Bifidobacterium longum subsp. longum ATCC 55813
1
Bifidobacterium saeculare DSM 6531
2
Bilophila wadsworthia ATCC 49260
2
biota
855
1
Blattabacterium cuenoti BPAY
1
Blattabacterium cuenoti STAT
1
Blautia obeum ATCC 29174
5
Blautia producta ATCC 27340
1
Blautia schinkii DSM 10518
3
Blautia wexlerae DSM 19850
5
Borrelia coriaceae Co53
1
Borrelia crocidurae DOU
1
Borrelia hermsii YBT
1
Borreliella valaisiana VS116
1
Bovine herpesvirus type 2 (strain BHM-1)
1
Brevibacillus brevis X23
1
Brevibacillus laterosporus DSM 25
1
Brevibacterium massiliense 5401308
1
Brevibacterium mcbrellneri ATCC 49030
1
Buchnera aphidicola (Acyrthosiphon kondoi)
1
Buchnera aphidicola (Acyrthosiphon pisum)
2
Buchnera aphidicola (Cinara cedri)
1
Buchnera aphidicola (Cinara confinis)
1
Buchnera aphidicola (Cinara pseudotaxifoliae)
1
Buchnera aphidicola (Diuraphis noxia)
1
Buchnera aphidicola (Schizaphis graminum)
1
Buchnera aphidicola (Schlechtendalia chinensis)
1
Buchnera aphidicola (Tuberolachnus salignus)
1
Buchnera aphidicola (Uroleucon ambrosiae)
1
Bunyavirus la crosse
1
Burkholderiales Genera incertae sedis
22
4
Butyricicoccus pullicaecorum 1.2
3
Butyricimonas virosa DSM 23226
2
Calditrichae
40
Calothrix brevissima NIES-22
1
Calothrix parasitica NIES-267
1
Campylobacter sputorum biovar sputorum
1
Campylobacter sputorum bv. sputorum RM3237
1
Candidatus Uzinura
1
Canine adenovirus 2
1
Capnocytophaga sp. ChDC OS43
1
Catenibacterium mitsuokai DSM 15897
2
Catonella morbi ATCC 51271
2
CCUG 38732
2
Chlamydia/Chlamydophila group
1
Chlamydiae/Verrucomicrobia group
335
1
Chlorobium/Pelodictyon group
1
Chondrococcus
3
Chromobacterium group
4
Chromophyta
2
Clostridiales bacterium ph2
1
Clostridioides difficile F501
4
Clostridioides difficile M120
1
Clostridioides difficile P28
1
Clostridioides difficile QCD-37x79
1
Clostridioides difficile QCD-63q42
1
Clostridioides difficile QCD-76w55
1
Clostridium beijerinckii NRRL B-598
1
Clostridium botulinum B
1
4
Clostridium botulinum CDC_1436
1
Clostridium botulinum F
1
Clostridium celatum DSM 1785
1
Clostridium hathewayi 12489931
1
Clostridium hathewayi DSM 13479
4
Clostridium nexile ATCC 27757
5
Clostridium orbiscindens 1_3_50AFAA
4
Clostridium paraputrificum AGR2156
1
Clostridium perfringens F262
1
Clostridium ramosum DSM 1402
2
Clostridium sp. DL-VIII
2
Collinsella intestinalis DSM 13280
3
Collinsella sp. YIT 12063
1
Collinsella stercoris DSM 13279
3
core eudicots
21
Coriobacteriaceae bacterium B7
2
Coriobacteriaceae bacterium JC110
4
2
Coriobacteriaceae bacterium phI
1
Corynebacterium accolens ATCC 49725
1
Corynebacterium durum F0235
2
Cyanobacteria/Melainabacteria group
17
1
Dactylococcopsis
2
Desulfobacula toluolica
2
Desulfosporosinus youngiae DSM 17734
1
Dethiobacter alkaliphilus AHT 1
1
Detolaasinbacter
2
Dialister sp. YIT 11850
3
Dickeya paradisiaca NCPPB 2511
1
Dickeya zeae MK19
1
dicots
21
Dolichospermum compactum NIES-806
1
Dorea formicigenerans ATCC 27755
5
Dorea longicatena AGR2136
2
DSM 22248
2
Eggerthella lenta 1_1_60AFAA
3
Embryophyta
21
Empedobacter brevis NBRC 14943 = ATCC 43319
1
Endozoicomonas montiporae CL-33
1
Enterobacter asburiae LF7a
1
Enterobacter cloacae UCI 49
1
Enterobacter cloacae UCICRE 3
1
Enterococcus faecalis EnGen0285
1
Enterococcus faecium E4453
2
Enterorhabdus mucosicola DSM 19490
2
environmental samples
1
1
Erysipelotrichaceae bacterium GAM147
2
Escherichia coli HVH 175 (4-3405184)
1
Escherichia coli M17
1
Escherichia coli O15:H11
1
Escherichia coli O157
1
Escherichia coli O55:H7
1
Escherichia coli STEC_DG131-3
1
euasterids I
21
Eubacterium brachy ATCC 33089
1
Eubacterium cylindroides ATCC 27803
2
Eubacterium limosum KIST612
1
Eubacterium plautii ATCC 29863
1
Eubacterium ramulus ATCC 29099
5
Euphyllophyta
21
Eutheria
1
Faecalicoccus pleomorphus ATCC 29734
2
FCB group
484
1
Flavisolibacter sp. 17J28-1
2
Fluoribacter dumoffii NY 23
1
Formosa agariphila KMM 3901
1
Fremyella diplosiphon NIES-3275
2
Fungi/Metazoa group
2
Fusobacterium hwasookii ChDC F206
1
Fusobacterium nucleatum subsp. animalis 21_1A
1
Geminocystis herdmanii PCC 6308
1
Granulicatella adiacens ATCC 49175
1
H11N8 subtype
1
Haemophilus haemolyticus M19107
1
Haemophilus influenzae PittAA
1
Haemophilus parahaemolyticus ATCC 10014
1
Haemophilus parahaemolyticus G321
1
Haemophilus paraphrohaemolyticus HK411
2
Haemophilus pittmaniae CCUG 48703
1
Haloplasma contractile SSD-17B
1
Halorubrum distributum JCM 9100
1
Herpes simplex virus (type 1 / strain A44)
1
HIV-1 M:CRF02 233Hald
1
Hoeflea phototrophica DFL-43
1
Holdemania filiformis DSM 12042
5
Holdemania massiliensis AP2
2
Human papillomavirus unidentified type (RTRX1)
1
IFM 1018
3
Igbo Ora virus
1
Immundisolibacterales
3
Influenza A virus (A/Bangkok(H3N2))
1
Influenza A virus (A/China/C1-8/2002(H3N2))
1
Influenza A virus (A/duck/Hunan/344/2006(H5N1))
1
Influenza A virus (A/northern shoveler/Alaska/17/2007(H3N8))
1
Influenza A virus (A/pigeon/Rostov-on-Don/6/07(H5N1))
1
Influenza A virus (A/Shiga/2/91(H3N2))
1
Influenza B virus (B/New York/02/2007)
1
Influenza B virus (B/Oregon/01/2007)
1
Influenza B virus (B/Pennsylvania/06/2007)
1
Jonquetella anthropi DSM 22815
1
Klebsiella michiganensis M5al
1
Klebsiella oxytoca BRL6-2
1
Klebsiella quasipneumoniae subsp. similipneumoniae MGH 44
1
Klebsiella variicola MGH 80
1
Komagataeibacter hansenii ATCC 23769
1
Kosakonia radicincitans DSM 16656
1
Labrenzia alexandrii DFL-11
1
Lachnospiraceae bacterium oral taxon 082 str. F0431
1
Lactobacillales incertae sedis
52
Lactobacillus amylovorus DSM 20531
1
Lactobacillus casei subsp. casei ATCC 393
1
Lactobacillus gasseri 202-4
1
Lactobacillus gasseri DSM 14869
1
Lactobacillus salivarius str. Ren
1
Leadbetterella
8
2
Leptospira biflexa serovar Patoc
1
Leptospira interrogans serovar Copenhageni/Icterohaemorrhagiae
1
Leptospira interrogans serovar Linhai
1
Leptospira interrogans serovar Manilae
1
lice endosymbionts
1
Listeria monocytogenes FSL J1-208
1
Mastadenovirus 1
1
mealybug secondary endosymbionts
1
Megamonas funiformis YIT 11815
1
1
Megamonas rupellensis DSM 19944
1
Megasphaera elsdenii 14-14
1
Mesangiospermae
21
Mesorhizobium ciceri biovar biserrulae
1
Mesorhizobium ciceri ca181
1
Methanobrevibacter smithii DSM 2375
1
methanotroph E10
1
Methylacidiphilum fumariolicum SolV
1
Microcystis aeruginosa PCC 7806
1
Microcystis aeruginosa PCC 7806SL
1
Mitsuokella jalaludinii DSM 13811
1
Mobiluncus/Falcivibrio group
51
Moorella group
4
Mycoplasma gallisepticum str. R
1
Mycoplasma mycoides subsp. capri LC
1
Myroides odoratus DSM 2801
1
Myxococcus fulvus 124B02
1
Mzabimycetaceae
1
Negativicoccus succinicivorans DORA_17_25
1
Neorhizobium galegae bv. officinalis
1
NIES-204
2
Nitrosospira briensis C-128
1
Nodularia spumigena CCY9414
1
Nonlabens
7
3
Nonlabens marinus S1-08
1
Norovirus noodle salad/Stuttgart21334/2006/DEU
1
Nostoc carneum NIES-2107
1
Nostoc linckia NIES-25
1
Oceanobacillus kimchii X50
1
Odoribacter laneus JCM 16069
2
Oenococcus kitaharae DSM 17330
1
oligotrophic marine Gammaproteobacteria group
1
OM182 clade
1
Oribacterium sinus F0268
1
Oscillibacter ruminantium GH1
3
Paenibacillus durus ATCC 35681
1
Parabacteroides distasonis CL03T12C09
1
Parabacteroides distasonis str. 3999B T(B) 4
2
Parabacteroides distasonis str. 3999B T(B) 6
1
Parabacteroides goldsteinii dnLKV18
1
Parabacteroides johnsonii CL02T12C29
1
Parabasalia
1
Paraprevotella clara str. YIT 11840
3
Pasteurella multocida subsp. multocida P1062
1
Pediococcus acidilactici 7_4
1
Peptoniphilus grossensis ph5
1
Peptoniphilus lacrimalis DNF00528
1
Peptostreptococcus anaerobius DSM 2949
1
Plasmodium cynomolgi (strain Ceylon)
1
Plasmodium cynomolgi (strain London)
1
Plasmodium falciparum (isolate mad20 / papua new guinea)
1
Plasmodium falciparum (isolate TAK 9)
1
Porphyromonas bennonis DSM 23058
1
Porphyromonas somerae DSM 23386
2
Porphyromonas uenonis DSM 23387
3
Prevotella bivia DNF00650
2
Prevotella corporis DSM 18810
1
Prevotella disiens ATCC 29426
1
Prevotella scopos JCM 17725
2
Prevotella sp. 4401737
3
Prevotella stercorea DSM 18206
2
primary endosymbiont of Heteropsylla cubana
1
Providencia sneebia DSM 19967
1
Pseudomonas amygdali pv. tabaci
1
Pseudomonas fluorescens NCIMB 11764
1
Pseudomonas fluorescens Q2-87
1
Pseudomonas fluorescens R124
1
Pseudomonas fluorescens WH6
1
Pseudomonas moraviensis R28-S
1
Pseudomonas putida S13.1.2
1
Pseudomonas stutzeri subgroup
3
Pseudomonas syringae group pathovars incertae sedis
1
Pseudomonas syringae pv. actinidiae
1
Pseudomonas syringae pv. syringae SM
1
Rhizobium etli 8C-3
1
Rhizobium leguminosarum (BIOVAR PHASEOLI)
1