Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank	Bacteria	BiomeSight 1302 Samples	Thryve 1079 Samples	uBiome 814 Samples	SequentiaBiotech 36 Samples	CosmosId 33 Samples	custom 23 Samples	AmericanGut 18 Samples	Microba 16 Samples	BiomeSightRdp 11 Samples	Medivere 7 Samples	es-xenogene 4 Samples
biotype	Haemophilus influenzae aegyptius						1
biotype	Mycobacterium tuberculosis variant caprae	1
biotype	Mycobacterium tuberculosis variant pinnipedii	118
clade							1
clade	50 kb inversion clade	354	11		2						3	1
clade	Amniota						1
clade	ant endosymbionts	327									6	4
clade	ant, tsetse, mealybug, aphid, etc. endosymbionts	336		1							6	4
clade	aphid secondary symbionts	17										1
clade	asterids			18
clade	Bacteria candidate phyla			199		5	1					3
clade	Bacteroidetes/Chlorobi group	1295	1066	790	36	32	22	18	15	11	7	4
clade	Bilateria	254	8	11	1		1			1	1	4
clade	Boreoeutheria						1
clade	Caldiserica/Cryosericota group	1	5									1
clade	Candidatus Baumannia											1
clade	Candidatus Dependentiae											3
clade	Candidatus Uzinura											1
clade	core chlorophytes									1
clade	core genistoids	355	11		2						3	1
clade	Cyanobacteria/Melainabacteria group	1214	732	31	18		8	7		5	7	4
clade	Deuterostomia	5					1					1
clade	Dicondylia	142	7	11	1					1	1	4
clade	Dipnotetrapodomorpha	5					1					1
clade	dothideomyceta						1
clade	Ecdysozoa	142	7	11	1					1	1	4
clade	Embryophyta	356	11	18	2						3	1
clade	eudicotyledons	356	11	18	2						3	1
clade	Eumetazoa	281	8	11	1		1			1	1	4
clade	Euphyllophyta	356	11	18	2						3	1
clade	Euteleostomi	5					1					1
clade	Eutheria						1
clade	fabids	354	11		2						3	1
clade	FCB group	1295	1066	790	36	32	22	18	16	11	7	4
clade	genistoids sensu lato	354	11		2						3	1
clade	Gnathostomata	5					1					1
clade	Gunneridae	356	11	18	2						3	1
clade	lamiids			18
clade	leotiomyceta						1				1
clade	lice endosymbionts			1
clade	Lophotrochozoa	244	1									1
clade	Luna-1 subcluster		2	1								3
clade	Mandibulata	142	7	11	1					1	1	4
clade	mealybug secondary endosymbionts											1
clade	Mesangiospermae	356	11	18	2						3	1
clade	Metamonada			1
clade	Methanomada group	356	226	220	16	3	4	11		7	7
clade	Nitrospinae/Tectomicrobia group	4	5
clade	OM182 clade			1
clade	OMG group			1
clade	Opisthokonta	281	8	11	1		4	13		1	6	4
clade	Panarthropoda	142	7	11	1					1	1	4
clade	Pancrustacea	142	7	11	1					1	1	4
clade	Patescibacteria group											1
clade	Pentapetalae	356	11	18	2						3	1
clade	Protostomia	249	8	11	1					1	1	4
clade	PVC group	1195	977	567	29	16	16	14	7	11	5	4
clade	Rhizaria						2			2
clade	rosids	354	11		2						3	1
clade	saccharomyceta						4				6
clade	Sar			2			2			2
clade	SAR116 cluster											1
clade	sordariomyceta						1
clade	Spermatophyta	356	11	18	2						3	1
clade	Spiralia	244	1									1
clade	Stenosarchaea group	13	8	10			1
clade	Stramenopiles			2
clade	sulfur-oxidizing symbionts			1								1
clade	TACK group	13	5				1
clade	Teleostomi	5					1					1
clade	Terrabacteria group	1295	1066	792	36	32	22	18	16	11	7	4
clade	Tetrapoda	5					1					1
clade	Theria						1
clade	Tracheophyta	356	11	18	2						3	1
clade	Vertebrata	5					1					1
class							1
class							1
class	Acidimicrobiia	158	342	2			3				3	1
class	Acidithiobacillia		36				1					1
class	Acidobacteriia	222	651	111			2			2	2	4
class	Actinomycetia	1285	1068	785	35	32	19	17	13	11	7	4
class	Agaricomycetes						1
class	algae						2			2
class	Alphaproteobacteria	1263	1040	437	32	4	8	7	9	11	7	4
class	Amphibia	5										1
class	Anaerolineae	538	225	9			1			5	7	4
class	Anthozoa	36										1
class	Aquificae	8	52				3			4		4
class	Archaeoglobi		1
class	Ardenticatenia		16				3					1
class	Armatimonadia		1
class	Bacilli	1298	1105	786	36	31	19	18	14	11	7	4
class	Bacteroidia	1298	1105	790	36	32	22	18	15	11	7	4
class	Balneolia	57	553		7		2			3
class	Betaproteobacteria	1295	1097	747	36	30	18	18	12	11	7	4
class	Bivalvia	177	1
class	Blastocatellia		123	1						1		3
class	Caldilineae	418	288				2			5	7	3
class	Caldisericia	1	5									1
class	Calditrichia	249	10								7	1
class	Candidatus Babeliae											3
class	Candidatus Brocadiia	11										1
class	Chitinispirillia		13							2
class	Chitinivibrionia		2
class	Chitinophagia	603	843	5		5	1	1		8	6	4
class	Chlamydiia	119	120				1			1	1	1
class	Chlorobia	1055	78	1			1			1	2	4
class	Chloroflexia	2	55	2	14		1					1
class	Chlorophyceae									1
class	Chrysiogenetes	224	15				1			1		1
class	Chthonomonadetes	5	100									3
class	Clostridia	1298	1105	792	36	32	22	18	15	11	7	4
class	Conoidasida						1
class	Coprothermobacteria	10	48	7
class	Coriobacteriia	1284	1099	786	36	32	13	18	11	11	7	4
class	Cytophagia	1248	932	7	12		4			8	6	4
class	Deferribacteres	312	92	1			1			1	4	4
class	Dehalococcoidia	87	214	1		1	1			2		4
class	Deinococci	815	224	7	13		1			6	7	4
class	Deltaproteobacteria	1282	1057	646	33	19	17	14	12	11	7	4
class	Dictyoglomia		74			2						1
class	Dothideomycetes						1
class	Elusimicrobia	7	79	7	19			3		5	7	1
class	Endomicrobia											1
class	Epsilonproteobacteria	709	502	266	10	3	2	7		8	7	4
class	Erysipelotrichia	1295	1104	785	36	31	14	17	9	11	7	4
class	Eurotiomycetes						1				1
class	Fibrobacteria	102	251	186			2					1
class	Fimbriimonadia	2	25									1
class	Flavobacteriia	1138	571	458	12	3	7	2		4	7	4
class	Florideophyceae							10
class	Fusobacteriia	666	639	144	7	4	2	2		5	6	4
class	Gammaproteobacteria	1295	1103	720	36	30	12	18	13	11	7	4
class	Gastropoda	91	1									1
class	Gemmatimonadetes	8	47	1	15		1			4	7	1
class	Gloeobacteria		9				1			1		1
class	Halobacteria	3	1				1
class	Holophagae	599	568				2			6
class	Hydrogenophilalia	640	237	6			1			1	1
class	Ignavibacteria	36	708	2	16		2			6		4
class	Insecta	142	7	11	1					1	1	4
class	Ktedonobacteria	108	13				1				3
class	Lentisphaeria		279	283	6	2	3	5	1	6		1
class	Limnochordia		1									1
class	Magnoliopsida	356	11	18	2						3	1
class	Mammalia						1
class	Methanobacteria	356	230	220	16	3	4	11		7	7
class	Methanococci						1
class	Methanomicrobia	10	7	10			1
class	Methylacidiphilae	12				1						1
class	Mollicutes	1248	965	167	25	1	5	2		10	6	4
class	Negativicutes	1291	1105	792	34	32	20	17	14	11	7	4
class	Nitriliruptoria	718	48				3			1		1
class	Nitrososphaeria	6	1
class	Nitrospinia	4	5
class	Nitrospira	229	48	1			1				6	4
class	Oligoflexia	22	85	1		1	1			1	1	4
class	Oligosphaeria		39	1
class	Opitutae	776	396	96	1	1	2			4	4	4
class	Phycisphaerae		2				1					4
class	Pisoniviricetes					1
class	Planctomycetia	14	104	1			1					4
class	Rhodothermia	84	23							1
class	Rubrobacteria	9	100				3			2		3
class	Saccharomycetes						4				6
class	Saprospiria	59	148									4
class	Solibacteres		31	1
class	Sordariomycetes						1
class	Spartobacteria	22	52
class	Sphingobacteriia	1298	606	18	26		5	4		9	7	4
class	Spirochaetia	561	177	16			4			5	1	4
class	Synergistia	966	407	236	1	1	3	1		7	7	4
class	Thermoanaerobaculia		77
class	Thermococci	3	1				1
class	Thermodesulfobacteria	124	23							1	2	1
class	Thermodesulfovibrionia Umezawa et al. 2021	83	2
class	Thermoflexia		4
class	Thermoleophilia	19	84							1
class	Thermolithobacteria		50
class	Thermomicrobia		16							2		1
class	Thermoplasmata		33	36			1
class	Thermoprotei	7
class	Thermotogae	43	22				1				6	4
class	Tissierellia	1282	1057	512	14	10	5	8		11	7	4
class	Tremellomycetes						1	13
class	unclassified Cyanobacteria											1
class	Verrucomicrobiae	1117	972	492	26	15	14	13	7	11	3	4
class	Vicinamibacteria											1
class	Zetaproteobacteria		30	1			1					1
cohort	Endopterygota											3
cohort	Paraneoptera	137	2	11						1		1
cohort	Polyneoptera	7	7		1						1
family		1
family	'Williamsiaceae'	2
family	Acanthopleuribacteraceae		57
family	Acaryochloridaceae		3
family	Acetobacteraceae	415	321	2	1	1	1			1	3	4
family	Acholeplasmataceae	1173	700	19	15		2			6	6	4
family	Acidaminococcaceae	1187	1015	565	22	21	10	13	10	7	7	4
family	Acidiferrobacteraceae		16									4
family	Acidimicrobiaceae	158	330				2				3	1
family	Acidithiobacillaceae		36				1					1
family	Acidobacteriaceae	221	163	87			1			2	2	4
family	Acidothermaceae		46									1
family	Actinomycetaceae	1032	962	634	24	27	6	8	1	11	7	4
family	Actinopolymorphaceae	75	1									1
family	Actinopolysporaceae	250	180							4		1
family	Aerococcaceae	541	898	80		2	3	1		9	7	4
family	Aeromonadaceae	289	214	7	4	1	1	3		1	2	4
family	Akkermansiaceae	1146	1035	811	36	28	16	18	14	10	4	4
family	Alcaligenaceae	1281	199	6	10		3	1		2	7	4
family	Alcanivoracaceae	149	20				1					1
family	Algiphilaceae		41
family	Alicyclobacillaceae	2	356		7		3			6		4
family	Alsobacteraceae		2
family	Alteromonadaceae	427	444				1	2	1	1		4
family	Amaranthaceae	3
family	Amoebophilaceae	1147	3				1				5	1
family	Anaerolineaceae	213	224	8			1			5		4
family	Anaeromyxobacteraceae	1	606			1	1					1
family	Anaeroplasmataceae	126	388	128	3		1	2		4	2
family	anamorphic Herpotrichiellaceae						1
family	Anaplasmataceae	330	21			1	1			2	2	4
family	Aphanizomenonaceae	860	3								7	4
family	Aphanothecaceae		3				1					1
family	Aphididae	2								1
family	Aquificaceae	8	19				2			4		3
family	Archaeoglobaceae		1
family	Archangiaceae	41	81				1					1
family	Arcobacteraceae Waite et al. 2017	76	20	1			1				1	4
family	Ardenticatenaceae		16				3					1
family	Armatimonadaceae		1
family	Aspergillaceae						1				1
family	Atopobiaceae	476	677	165	10	4	1			7	3	4
family	Aurantimonadaceae	14	16				1					1
family	Azonexaceae	112	23				1			1
family	Azospirillaceae	654	506	1	2		1		3	7	2	4
family	Babyloniidae	1
family	Bacillaceae	1191	818	232	31	3	5	12		10	7	4
family	Bacillales Family X. Incertae Sedis	1291	531				3			5	7
family	Bacillidae	7	6		1						1
family	bacterial virus						1
family	Bacteriovoracaceae	8	41	1		1						1
family	Bacteroidaceae	1298	1105	784	35	32	22	18	15	11	7	4
family	Balneatrichaceae		13
family	Balneicellaceae								9
family	Balneolaceae	58	549		1		2			3
family	Barnesiellaceae		934	513	11	16	8	18	6	9		4
family	Bartonellaceae	37	11				1					4
family	Bdellovibrionaceae	14	10				1			1	1	1
family	Beijerinckiaceae	40	9									4
family	Bernardetiaceae		110				2					1
family	Beutenbergiaceae											1
family	Bifidobacteriaceae	1286	1105	812	36	31	20	18	15	11	7	4
family	Blastocatellaceae		18	1						1
family	Blastochloridaceae	5										1
family	Blastocystidae			2
family	Blattabacteriaceae						1					4
family	Bogoriellaceae	9	42						2
family	Borreliaceae	17	2				1					4
family	Boseaceae		7	1			1					4
family	Brachyspiraceae	23		13			1					4
family	Bradymonadaceae											1
family	Bradyrhizobiaceae	45	56	11			1	1		1	1	4
family	Breoghaniaceae											1
family	Brevibacteriaceae	96	101	60			1	1			7	4
family	Brevinemataceae		5							1
family	Brucellaceae	118	40	25	4		1	1		2		4
family	Bruguierivoracaceae Li et al. 2021	5	26				1					4
family	Bryobacteraceae		19				1
family	Budviciaceae		267				1		10	1		4
family	Burkholderiaceae	1154	362	27	17		3	3	1	9	7	4
family	Caedimonadaceae											1
family	Caldicoprobacteraceae		36	236
family	Caldilineaceae	420	286				2			5	7	3
family	Caldisericaceae		5									1
family	Calditrichaceae	249	10								7	1
family	Caliciviridae					1
family	Calotrichaceae	522	99				1				6	4
family	Campylobacteraceae	524	419	265	7	3	2	7		6	7	4
family	Candidatus Babeliaceae											3
family	Candidatus Brocadiaceae	11										1
family	Candidatus Competibacteraceae		160				2			1
family	Candidatus Desulfofervidaceae											1
family	Candidatus Methanomethylophilaceae			23
family	Candidatus Midichloriaceae			1								1
family	Candidatus Nanopelagicaceae						1					3
family	Candidatus Paracaedibacteraceae				1
family	Candidatus Scalinduaceae Lodha et al. 2021	11
family	Cardiobacteriaceae	28	153	2			1					1
family	Carnobacteriaceae	821	631	325	5	13	5	3	1	8	7	4
family	Catabacteriaceae		149	99	1	1			1	8	6
family	Catalimonadaceae		44
family	Catenulisporaceae		3									4
family	Caulobacteraceae	597	148	9			1	4		4	1	4
family	Celerinatantimonadaceae		6
family	Cellulomonadaceae	77	87			4	1					4
family	Cellvibrionaceae	92	78				1					4
family	Cenarchaeaceae DeLong and Preston 1996	2
family	Cesiribacteraceae		44
family	Chamaesiphonaceae		5									3
family	Chelatococcaceae	4	3									1
family	Chitinispirillaceae		13							2
family	Chitinivibrionaceae		2
family	Chitinophagaceae	610	843	5		5	1	1		8	6	4
family	Chlamydiaceae	1	2				1					1
family	Chlorobiaceae	1055	78				1			1	2	4
family	Chloroflexaceae		2	2								1
family	Chlorogloeopsidaceae		10
family	Christensenellaceae		245	180	24	26	3	14		10	7	4
family	Chromatiaceae	1053	533	2	1		3			3	6	4
family	Chromobacteriaceae	179	102				1				1	4
family	Chroococcaceae	529	2								2	1
family	Chroococcidiopsidaceae	1					1					1
family	Chrysiogenaceae	228	15				1			1		1
family	Chthoniobacteraceae	22	12
family	Chthonomonadaceae	5	100									3
family	Clostridiaceae	1297	1105	788	36	32	20	17	13	11	7	4
family	Clostridiales Family XI. Incertae Sedis			217
family	Clostridiales Family XVI. Incertae Sedis	722	31				4			3	2	1
family	Clostridiales Family XVII. Incertae Sedis	51	106			1	1			7	2	4
family	Coccidae	109								3
family	Coelosphaeriaceae	30
family	Cohaesibacteraceae		1									1
family	Coleofasciculaceae	9	3
family	Colwelliaceae	2	169				1			2		4
family	Comamonadaceae	1146	217	111	3		2	9		4	6	4
family	Conexibacteraceae	6	8
family	Coprobacillaceae Verbarg et al. 2014	1280	839	393	5	28	5	11		4	7
family	Coprothermobacteraceae	10	48	7
family	Coriobacteriaceae	1290	976	781	34	24	7	18		10	7	4
family	Corynebacteriaceae	643	628	445	8	13	2	7	1	9	1	4
family	Coxiellaceae	33	42	2			1				1	1
family	Crenotrichaceae	2
family	Criblamydiaceae		43
family	Crocinitomicaceae		28		3		1					1
family	Cryomorphaceae		93	1								1
family	Cryptococcaceae							13
family	Cryptosporangiaceae	1
family	Cryptosporidiidae						1
family	Cyanobacteriaceae	199	31								1
family	Cyanobacteriaceae	200	31								1
family	Cyanobiaceae Salazar et al., 2020	3	5	1			1					4
family	Cyanothecaceae											1
family	Cyclobacteriaceae		292				1					4
family	Cytophagaceae	1183	743	3	4		1			5	6	4
family	Debaryomycetaceae						1
family	Deferribacteraceae	314	105	1			1			1	4	4
family	Defluviitaleaceae		265	18	3		3			9
family	Dehalococcoidaceae	87	57			1	1			1		1
family	Deinococcaceae	610	146	6	1		1			1	4	4
family	Demequinaceae	5	56							1
family	Dermabacteraceae	211	78	55			1		1			4
family	Dermacoccaceae	10	30	2		1	1	1				1
family	Dermatophilaceae	1	9									1
family	Dermocarpellaceae											1
family	Desulfallaceae Watanabe et al. 2020	551	209				3			1	7	1
family	Desulfarculaceae		232									1
family	Desulfobacteraceae	301	636	2	2		7			7	2	4
family	Desulfobulbaceae	18	105		1		1					1
family	Desulfocapsaceae	11	15				1					1
family	Desulfohalobiaceae	240	58								7	3
family	Desulfomicrobiaceae	84	266				1			7		4
family	Desulfonatronaceae	260	43								2
family	Desulfovibrionaceae	1244	962	646	32	19	13	14	12	11	7	4
family	Desulfurellaceae	5	9									1
family	Desulfurobacteriaceae		8									1
family	Desulfurococcaceae	1
family	Desulfuromonadaceae	636	107				3				5	4
family	Devosiaceae	406	66					1				4
family	Diapheromeridae		1
family	Dictyoglomaceae		74			2						1
family	Dientamoebidae			1
family	Dietziaceae	68	142	2					1			1
family	Dysgonomonadaceae	1034	691	46	4		7	2		7	7	4
family	Ectothiorhodospiraceae	860	242	1			3			7	2	4
family	Edwardsiidae	36										1
family	Eggerthellaceae	1271	1073	774	35	32	13	14	11	11	7	4
family	Egibacteraceae											1
family	Egicoccaceae											1
family	Elioraeaceae		3
family	Elusimicrobiaceae	7	60	7				3		1		1
family	Emcibacteraceae		122
family	Endomicrobiaceae											1
family	Endozoicomonadaceae		6									1
family	Enterobacteriaceae	1246	673	593	32	28	10	17	13	11	7	4
family	Enterococcaceae	1186	354	140	28	27	7	11	5	7	4	4
family	Entomoplasmataceae	579	76				1			3	2	4
family	Eriococcidae		1	11
family	Erwiniaceae	318	357	176	4		2	11		1	2	4
family	Erysipelotrichaceae	1295	1104	785	36	31	13	17	9	11	7	4
family	Erythrobacteraceae	101	48	2			1	1				4
family	Eubacteriaceae	1291	1105	299	36	32	13	13	12	11	7	4
family	Eubacteriales Family XII. Incertae Sedis	357	582	18			6			8	6
family	Eubacteriales Family XIII. Incertae Sedis	1080	1020	656	31	17	4	12	1	11	7	4
family	Euzebyaceae	717	42				1			1		1
family	Fabaceae	354	11		2						3	1
family	Fastidiosibacteraceae		15
family	Faucheaceae							10
family	Ferrimonadaceae	12	42									1
family	Ferrovaceae		2
family	Fervidobacteriaceae	14	1				1				1	4
family	Fibrobacteraceae	102	239	140			2					1
family	Fimbriimonadaceae	2	25									1
family	Flammeovirgaceae	288	373	1			3			1		4
family	Flavobacteriaceae	1138	508	455	3	1	7	2		4	7	4
family	Flexibacteraceae		8	1	2
family	Fortieaceae		15
family	Francisellaceae	53	76	2			2				1	4
family	Frankiaceae	2	6				1					4
family	Fulvivirgaceae	6	152				2			1		4
family	Fusobacteriaceae	603	545	121	7	4	1	2		4	6	4
family	Gaiellaceae		40				2
family	Gallionellaceae	158	29				1	2				1
family	Geminicoccaceae		40							2
family	Gemmataceae	7	15	1			1					1
family	Gemmatimonadaceae	8	31	1			1					1
family	Geobacteraceae	78	68				5				1	4
family	Geodermatophilaceae	12	103	1						1		4
family	Gloeobacteraceae		9				1			1		1
family	Gloeotrichiaceae	3
family	Glycomycetaceae	60	134							1	1	1
family	Gomontiellaceae		93							2		1
family	Gomphosphaeriaceae	31
family	Gordoniaceae	44	67	1			1					4
family	Gottschalkiaceae		135				4			3		4
family	Gracilibacteraceae		464	9	3		3			7
family	Granulosicoccaceae		78									1
family	great apes						1
family	Hafniaceae	73	52	14	2		4			1		1
family	Hahellaceae	149	198				2			1		3
family	Halanaerobiaceae	256	233	1			3			6	2	4
family	Halieaceae		63				1					1
family	Haliscomenobacteraceae		82									3
family	Haloarculaceae		1
family	Halobacteriaceae	3	1				1
family	Halobacteriaceae Clade I						1
family	Halobacteriovoraceae	7	34				1					4
family	Halobacteroidaceae	41	374				3			3	4	1
family	Haloferacaceae	1					1
family	Halomonadaceae	459	472		2	1	4			1	3	4
family	Haloplasmataceae		34	1						2
family	Halorubraceae	2
family	Halothiobacillaceae	17	102				2
family	Hapalosiphonaceae											1
family	Helicobacteraceae	369	44	3			1			1	1	4
family	Heliobacteriaceae	567	196		4		2		3	6	5	1
family	Herpetosiphonaceae	1	5
family	Heteroleibleiniaceae		13
family	Holophagaceae	599	524				2			5
family	Holosporaceae					1						3
family	Hungateiclostridiaceae	592	726	142	35	7	2		6	8	6	4
family	Hydrogenophilaceae	644	244	5			1			1	1
family	Hydrogenothermaceae		25							1		1
family	Hyellaceae											1
family	Hymenobacteraceae	871	204	2			1			5	1	4
family	Hyphomicrobiaceae	583	109				1	1		1	5	4
family	Hyphomonadaceae	75	570	1			1			5	3	2
family	Iamiaceae		21
family	Ichthyobacteriaceae											1
family	Idiomarinaceae	48	27				1			1		1
family	Ignavibacteriaceae	36	41	1								1
family	Ilumatobacteraceae		81
family	Immundisolibacteraceae											3
family	Intrasporangiaceae	47	66				1					4
family	Isosphaeraceae	6	5	1								4
family	Jatrophihabitantaceae		6									1
family	Jiangellaceae	16	8								1	4
family	Jonesiaceae	24	100
family	Kaistiaceae	10	36							1
family	Kallotenuaceae		15
family	Kangiellaceae		36									1
family	Kiloniellaceae	293	468		5					2
family	Kineosporiaceae	14	52							1		1
family	Kofleriaceae	111	26									3
family	Kordiimonadaceae		141
family	Kosmotogaceae	10	1				1					1
family	Kribbellaceae	67	278								5
family	Ktedonobacteraceae		1
family	Kytococcaceae	1		2								1
family	Labilitrichaceae		36
family	Lachnospiraceae	1298	1105	791	36	32	22	18	15	11	7	4
family	Lacipirellulaceae		6
family	Lactobacillaceae	1265	1105	813	36	29	12	18	12	11	7	4
family	Lawsonellaceae				1
family	Legionellaceae	833	70	1			1			4	3	4
family	Lentisphaeraceae		4
family	Leptolyngbyaceae	295	3	1			1				2	4
family	Leptospiraceae	347	53				4			2		4
family	Leptotrichiaceae	157	205	38			2			1	1	4
family	Leuconostocaceae	1010	1001	102	9	3	1	2	5	8	6	4
family	Lewinellaceae	58	8
family	Limnochordaceae		1									1
family	Listeriaceae	862	246	1		1	1	4		3	1	4
family	Litoricolaceae	79	38								3
family	Luteibaculaceae Bowman 2020		1
family	Magnetococcaceae		18				1					1
family	Maricaulaceae	9	32									1
family	Marinifilaceae		284				1			4		4
family	Marinilabiliaceae		556	1	7					6		1
family	Marinobacteraceae Liao et al. 2020	68	157				1		1			4
family	Mariprofundaceae		30	1			1					1
family	Marivirgaceae		2				2					1
family	Melioribacteraceae		700		16		2			6		4
family	Merismopediaceae				3
family	Mesoaciditogaceae		5
family	Methanobacteriaceae	356	225	220	3	3	4	11		6	1
family	Methanococcaceae						1
family	Methanocorpusculaceae	4	1	1
family	Methanomassiliicoccaceae		33	31			1
family	Methanoregulaceae		2
family	Methanosarcinaceae	7	3				1
family	Methanotrichaceae		1
family	Methylacidiphilaceae	12				1						1
family	Methylobacteriaceae	69	56	4			1					4
family	Methylococcaceae	6	188	1			3					4
family	Methylocystaceae	18	21				1					4
family	Methylophilaceae	555	271				1			1	2	1
family	Methylothermaceae		48
family	Microbacteriaceae	404	601	49			2	3		4	5	4
family	Microbulbiferaceae	7	1				1					4
family	Micrococcaceae	490	563	151	25	21	5	1		4	6	4
family	Microcoleaceae	286	308	1			1			1		4
family	Microcystaceae	6					2					1
family	Micromonosporaceae	375	234	1			1	1		2	6	4
family	Micropepsaceae		12
family	Microscillaceae		138									1
family	Microviridae										7
family	Mooreiaceae		10
family	Moraxellaceae	644	525	21	7	3	1	5	3	7	6	4
family	Morganellaceae	188	492	17	17	1	2	10	1	10	7	4
family	Moritellaceae		1				1					1
family	Motilibacteraceae		6
family	Muribaculaceae						2			1		4
family	Mycobacteriaceae	201	99	59		2	1			2	1	4
family	Mycoplasmataceae	1070	765	11	6		2			7	5	4
family	Mycoplasmoidaceae		23
family	Myoviridae						1
family	Myxococcaceae	1	4				1					4
family	Mzabimycetaceae		143
family	Nakamurellaceae		2							1		4
family	Nannocystaceae	86	25								1
family	Natranaerobiaceae		31									1
family	Nautiliaceae	3	31				1			2		1
family	Neisseriaceae	413	195	68	10	5	2	3	1	4	7	4
family	Neomegalonemataceae		22							1
family	Nitratiruptoraceae Waite et al. 2017		1									1
family	Nitriliruptoraceae	5	6				2
family	Nitrosomonadaceae	10	334	8	4		3			3		4
family	Nitrosopumilaceae	1	4				1
family	Nitrososphaeraceae	6	1
family	Nitrospinaceae	4	5
family	Nitrospiraceae	229	48	1			1				5	4
family	Nocardiaceae	121	11	21			1			2	1	4
family	Nocardioidaceae	175	396	1			2				6	4
family	Nocardiopsaceae		304				1	2		1		4
family	Nostocaceae	1102	5		2		1			1	7	4
family	Oceanospirillaceae	327	277				1	1				4
family	Odoribacteraceae	1211	1019	619	33	24	14	16	12	10	7	4
family	Oleiphilaceae											3
family	Oligoflexaceae		1
family	Oligosphaeraceae		39
family	Opitutaceae	7	47			1	1			1		4
family	Orbaceae		5				1					4
family	Ornithinimicrobiaceae	28	20				1					4
family	Oscillatoriaceae	598	120									4
family	Oscillospiraceae	1292	1105	788	36	32	22	18	15	11	7	4
family	Oxalobacteraceae	827	487	258	25	2	3	8		7	7	4
family	Paenibacillaceae	1028	935	1	29		4	6		6	7	4
family	Paludibacteraceae	5	137	1	3		2	2		1		4
family	Parachlamydiaceae	2	3									1
family	Parvibaculaceae		2									4
family	Parvoviridae									2
family	Parvularculaceae		31									1
family	Pasteurellaceae	1050	889	548	29	16	6	17	5	7	7	4
family	Pasteuriaceae	51
family	Patulibacteraceae	1	3
family	Pectobacteriaceae	65	432	2	1		1			1	3	4
family	Pelagibacteraceae		4				1					1
family	Peptococcaceae	1278	1022	520	24	4	6	9		10	7	4
family	Peptoniphilaceae	1258	1026	505	7	9	4	8		11	7	4
family	Peptostreptococcaceae	1151	1100	789	30	31	11	15	6	11	7	4
family	Perlucidibacaceae Liao et al. 2020		3
family	Persicobacteraceae	1	75							1		4
family	Petrotogaceae	16	9				1				6	4
family	phages with long non-contractile tails						1
family	Phreatobacteraceae		1									1
family	Phycisphaeraceae		2									1
family	Phyllobacteriaceae	17	37	35			1	1				4
family	Pirellulaceae Dedysh et al. 2020	3	38									1
family	Piscirickettsiaceae	169	295	2			3	1				4
family	Planctomycetaceae	7	97				1					1
family	Planococcaceae	635	900	39	22		2	6		11	7	4
family	Pleioneaceae		2
family	Pleomorphomonadaceae	5	7									1
family	Polyangiaceae	51	3	1			1					4
family	Porphyromonadaceae	1293	1093	524	35	22	6	10	1	11	7	4
family	Porticoccaceae		1
family	Prevotellaceae	1273	1098	568	21	13	20	17		11	7	4
family	Prochloraceae	2	2				1					4
family	Prochlorococcaceae			1
family	Prochlorotrichaceae		3									3
family	Prolixibacteraceae		143				1			4		1
family	Promicromonosporaceae	3	50					1	1			4
family	Propionibacteriaceae	53	432	118	13	9	1			4	4	4
family	Proteidae	5										1
family	Proteinivoraceae	1003	460				7			8	7
family	Pseudanabaenaceae	376	3								2	4
family	Pseudoalteromonadaceae	29	45				1				1	4
family	Pseudococcidae	32	2									1
family	Pseudomonadaceae	352	394	51	9	2	5	11		2	5	4
family	Pseudonocardiaceae	342	330				1			2	4	4
family	Pseudoxanthobacteraceae		5
family	Psychromonadaceae	15	36									4
family	Puniceicoccaceae	771	374	7			1			4	4	1
family	Pyrinomonadaceae		38
family	Rarobacteraceae		56
family	Reichenbachiellaceae		40
family	Reyranellaceae		5
family	Rhabdochlamydiaceae	112
family	Rhizobiaceae	327	82	8	14		1	1		1	7	4
family	Rhodanobacteraceae	890	207				1			3	3	4
family	Rhodobacteraceae	247	280	4	4	1	1	1		4	7	4
family	Rhodobiaceae	3	7	3								4
family	Rhodocyclaceae	788	364	70			1	1		1		1
family	Rhodospirillaceae	1055	826	370	25		5		9	10	7	4
family	Rhodothalassiaceae	10	13							1
family	Rhodothermaceae	1190	136		6		2			7	1	4
family	Rhodovibrionaceae	271	418		1					8
family	Rickettsiaceae	675	225				1			2	6	4
family	Rikenellaceae	29	1077	733	35	31	16	18	14	10	7	4
family	Rivulariaceae	573	100								6	4
family	Robiginitomaculaceae		41							2
family	Roseiarcaceae		4
family	Roseiflexaceae	1	9									1
family	Roseivirgaceae		43
family	Roseobacteraceae Pujalte et al. 2014	64	50	1			1				2	4
family	Ruaniaceae						1
family	Rubricoccaceae		9
family	Rubritaleaceae	422	159						3	1
family	Rubrobacteraceae	9	66				3			2		3
family	Ruminococcaceae	1298	1105	788	36	27	6	18	15	11	7	4
family	Saccharomycetaceae						4				5
family	Saccharospirillaceae	31	427							1		1
family	Salinibacteraceae		2
family	Salinisphaeraceae		16									1
family	Salinivirgaceae											1
family	Salisaetaceae	269	111				1			4
family	Sandaracinaceae		11									1
family	Sanguibacteraceae	4	2								1	1
family	Saprospiraceae	59	46									1
family	Schleiferiaceae		18									1
family	Scytonemataceae		2									4
family	Sedimentisphaeraceae						1					3
family	Segniliparaceae		33				2					1
family	Selenomonadaceae	1275	622	99	12	5	8			11	7	4
family	Shewanellaceae	799	149				2			1	5	4
family	Simkaniaceae		7									1
family	Sinobacteraceae	918	144	2			1			1		1
family	Sneathiellaceae		10
family	Solanaceae			11
family	Solibacteraceae	1		1								1
family	Solirubrobacteraceae	11	21
family	Sphaerobacteraceae		27							1
family	Sphaerochaetaceae	3	2				1					1
family	Sphingobacteriaceae	1296	606	4	24		5	4		9	7	4
family	Sphingomonadaceae	452	597	17	14		2	1		6	6	4
family	Sphingosinicellaceae		9							1		4
family	Spirillaceae		4		14
family	Spirochaetaceae	301	114				1			3	1	4
family	Spiroplasmataceae		369				1			6		4
family	Spirosomaceae	1033	610		2		3			4	6	4
family	Spirulinaceae		9
family	Spongiibacteraceae		182							1		1
family	Sporichthyaceae	3	8
family	Sporolactobacillaceae	400	137				2				1	1
family	Sporomusaceae	856	742	34			3			5	7	4
family	Staphylinidae											3
family	Staphylococcaceae	1011	328	207	3	3	6	5	3	6	5	4
family	Stappiaceae		2				1					4
family	Stellaceae		186							1
family	Steroidobacteraceae	14	32
family	Sterolibacteriaceae	200	63	11			1					4
family	Streptococcaceae	1288	1102	774	36	31	16	16	11	11	7	4
family	Streptomycetaceae	243	201		2		1	2			6	4
family	Streptosporangiaceae	503	164				1				2	1
family	Succinivibrionaceae	336	274	15		2	1	3
family	Sulfolobaceae	5
family	Sulfuricellaceae Watanabe et al. 2014		6				1					1
family	Sulfurovaceae Waite et al. 2017		5				1					1
family	Sutterellaceae	1275	1090	713	36	28	17	18	11	11	7	3
family	Symbiobacteriaceae	781	272				3			7		3
family	Synechococcaceae	378	8	1			1					4
family	Synergistaceae	960	407	236	1	1	3	1		7	7	4
family	Syntrophaceae	198	57				1			1	1	4
family	Syntrophobacteraceae	401	403				2				2	1
family	Syntrophomonadaceae	1069	477	11			3			4	5	4
family	Syntrophorhabdaceae		35	1
family	Syntrophotaleaceae	10
family	Tannerellaceae	1283	1049	719	34	32	19	18	13	11	7	4
family	Temperatibacteraceae		1
family	Tepidamorphaceae		2
family	Tepidanaerobacteraceae	426	11				1				2	1
family	Terasakiellaceae											1
family	Terrimicrobiaceae		4
family	Thalassobaculaceae	61	2							2
family	Thalassospiraceae	292	34	358						1		1
family	Thermaceae	461	88	1			1			2	5	4
family	Thermoactinomycetaceae	801	531	1			4			4	6	4
family	Thermoanaerobacteraceae	1108	313	212			4			6	4	4
family	Thermoanaerobacterales Family III. Incertae Sedis	1252	156		1		4			8	7	4
family	Thermoanaerobacterales Family IV. Incertae Sedis		33				1
family	Thermoanaerobaculaceae		77
family	Thermococcaceae	3	1				1
family	Thermodesulfobacteriaceae	124	23							1	2	1
family	Thermodesulfobiaceae	11	61	17	5		2			2		1
family	Thermodesulfovibrionaceae	223	15								6	3
family	Thermoflexaceae		4
family	Thermoflexibacteraceae		106
family	Thermogemmatisporaceae	108	7								3
family	Thermoguttaceae Dedysh et al. 2020		39									1
family	Thermohalobacteraceae Spring 2020		819		4		4			8
family	Thermoleophilaceae		36							1
family	Thermolithobacteraceae		50
family	Thermomicrobiaceae											1
family	Thermomonosporaceae	361	64				1			1	3	4
family	Thermonemataceae		19							4
family	Thermoproteaceae	1
family	Thermosediminibacteraceae	83	47								6	1
family	Thermosporotrichaceae		6
family	Thermosynechococcaceae											1
family	Thermotogaceae	44	1				1				6	4
family	Thermotomaculaceae		14							1
family	Thioalkalibacteraceae	10	1
family	Thioalkalispiraceae		53	1								3
family	Thiobacillaceae	219	61	6							1	1
family	Thiofilaceae		3
family	Thiolinaceae		2
family	Thioprofundaceae		6
family	Thiotrichaceae	872	74	1				3		1	3	1
family	Thiovulaceae Waite et al. 2017	6	12				1					3
family	Thorselliaceae		53
family	Tissierellaceae	78	494	1	2	1	4			5	3	4
family	Treponemataceae	300	55				1			4	1	4
family	Trichocoleusaceae		2
family	Trichocomaceae										1
family	Tropherymataceae		57									1
family	Trueperaceae		14
family	Tsukamurellaceae	65	3								1	4
family	Turicibacteraceae Verbarg et al. 2014	884	662	474	8	14	6	11	2	8	5	4
family	unclassified Actinobacteria (class) (miscellaneous)											1
family	unclassified Bacillales		19	40
family	unclassified Burkholderiales	200	198	18		15		3			3	4
family	unclassified Clostridiales		719	783	35	29	5	1	3	8		4
family	unclassified Rickettsiales											4
family	Unionidae	178	1
family	Vallitaleaceae Quemeneur et al.		64		3		4			9
family	Veillonellaceae	1297	1098	744	32	28	14	16	6	11	7	4
family	Verrucomicrobia subdivision 3	12	20				2
family	Verrucomicrobiaceae	1114	195	220			3	1		2	3	1
family	Vibrionaceae	86	102				3				4	4
family	Vicinamibacteraceae											1
family	Victivallaceae		274	283	6	2	2	5		6
family	Viviparidae	90	1									1
family	Waddliaceae	5	1
family	Weeksellaceae	56	97	8			1	1		1		4
family	Wenzhouxiangellaceae		33									1
family	Woeseiaceae											1
family	Xanthobacteraceae	25	20				1				6	1
family	Xanthomonadaceae	1050	283	19			4	7		5	6	4
family	Xenococcaceae	1
family	Yersiniaceae	973	186	20	6		7	13		10		4
family	Zoogloeaceae	306	140	1	1		1	2		1	3	4
family	Zymomonadaceae	1	1									1
forma specialis	Buchnera aphidicola (Acyrthosiphon kondoi)											1
forma specialis	Buchnera aphidicola (Acyrthosiphon pisum)											2
forma specialis	Buchnera aphidicola (Aphis glycines)											1
forma specialis	Buchnera aphidicola (Cinara cedri)											1
forma specialis	Buchnera aphidicola (Cinara confinis)											1
forma specialis	Buchnera aphidicola (Cinara pseudotaxifoliae)											1
forma specialis	Buchnera aphidicola (Cinara tujafilina)											1
forma specialis	Buchnera aphidicola (Diuraphis noxia)											1
forma specialis	Buchnera aphidicola (Myzus persicae)											4
forma specialis	Buchnera aphidicola (Schizaphis graminum)											1
forma specialis	Buchnera aphidicola (Schlechtendalia chinensis)											1
forma specialis	Buchnera aphidicola (Tuberolachnus salignus)											1
forma specialis	Buchnera aphidicola (Uroleucon ambrosiae)											1
forma specialis	cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko											1
forma specialis	endosymbiont of Bathymodiolus septemdierum str. Myojin knoll											1
forma specialis	primary endosymbiont of Heteropsylla cubana											1
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis											1
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina morsitans											4
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)											3
genus							1
genus							1
genus							1
genus							1
genus							1
genus	'Haloanella'	2
genus	'Kouleothrix'	1
genus	'Terrahaemophilus'						1
genus	Abiotrophia	78	131	9		2	2			2
genus	Absiella	397	406			12	1			6	1
genus	Abyssivirga						1
genus	Acanthopleuribacter		57
genus	Acaryochloris		3
genus	Accumulibacter											3
genus	Acetanaerobacterium		522	123	1		3			9
genus	Acetatifactor		992	2		1	3			4
genus	Acetilactobacillus											3
genus	Acetitomaculum		754	138	1		3			3
genus	Acetivibrio	1274	1016	32	26	2	9			9	7	4
genus	Acetoanaerobium		567				4			7		1
genus	Acetobacter	4	17			1	1					3
genus	Acetobacterium	1273	456			2	4			7	7	4
genus	Acetobacteroides		275
genus	Acetohalobium	35	3				1					1
genus	Acetomicrobium	12	37									1
genus	Acetonema		242				2			2
genus	Acholeplasma	901	699	6	1		2			6	3	4
genus	Achromatium	11
genus	Achromobacter	110		1	9		1			1	2	4
genus	Acidaminobacter	306	304				3			6	3
genus	Acidaminococcus	906	565	96	4	1	5	5		4	3	4
genus	Acidianus	1
genus	Acidibacter		47
genus	Acidibrevibacterium											1
genus	Acidicaldus		2
genus	Acidicapsa		64							1
genus	Acidiferrobacter		10									3
genus	Acidihalobacter						1					1
genus	Acidimicrobium	142									1	1
genus	Acidiphilium	34	16								1	1
genus	Acidipropionibacterium	17		1			1					4
genus	Acidisoma	2
genus	Acidisphaera	1										1
genus	Aciditerrimonas		136				2
genus	Acidithiobacillus		36				1					1
genus	Acidobacterium	1										3
genus	Acidocella	2	1
genus	Acidothermus		46									1
genus	Acidovorax	72	36	1			1	1			4	4
genus	Acinetobacter	285	286	16	6	3	1	5	3	1	4	4
genus	Acrocarpospora		4
genus	Actibacter		1
genus	Actimicrobium		2
genus	Actinoallomurus	2
genus	Actinoalloteichus											4
genus	Actinobacillus	733	278	90	7		4			1	5	4
genus	Actinobaculum	97	8	17		7		2				1
genus	Actinocatenispora	329	91							1
genus	Actinocorallia	3	4								2
genus	Actinokineospora	4									3
genus	Actinomadura	33	36				1				2	1
genus	Actinomyces	947	866	579	10	27	5	5		10	7	4
genus	Actinomycetospora	5	2
genus	Actinoplanes	9	86				1					4
genus	Actinopolymorpha	75	1									1
genus	Actinopolyspora	250	177							4		1
genus	Actinosynnema											1
genus	Actinotalea	1
genus	Actinotignum	20	59	29						3
genus	Acutalibacter									9
genus	Adhaeribacter		32
genus	Adlercreutzia	949		537	5	25	6	6	1	1	6	1
genus	Advenella		5				1					3
genus	Aequorivita	1	9		2							1
genus	Aeribacillus		27							1		1
genus	Aeriscardovia		157
genus	Aerococcus	25	309	16			1			2		4
genus	Aeromicrobium	12	3	1							3	1
genus	Aeromonas		138	7	4	1	1					4
genus	Aerosphaera			48
genus	Aerosticca Watanabe et al. 2020											3
genus	Aestuariibacter		2
genus	Aestuariispira		481		2
genus	Afifella	1
genus	Afipia	4		1								3
genus	Agaribacter		285
genus	Agarilytica											1
genus	Agarivorans		21									1
genus	Agathobacter						1	1
genus	Agathobaculum		1036	1	8	27	4			10
genus	Aggregatibacter	347	194	172	2	3	2	1		5	5	1
genus	Aggregicoccus		1
genus	Agreia		2
genus	Agrilactobacillus		134							3
genus	Agrobacterium	56					1					4
genus	Agrococcus	21	2	3						1		1
genus	Agromyces	205	84				1			2	1	1
genus	Ahniella											1
genus	Ahrensia		1
genus	Akkermansia	1151	1035	811	36	28	16	18	14	10	4	4
genus	Albibacterium		1
genus	Albidovulum		1	1
genus	Albimonas		3
genus	Alcaligenes		13	2			1					3
genus	Alcanivorax	149	11				1					1
genus	Algibacter	1	3									1
genus	Algicola		43
genus	Algimonas		13							2
genus	Algiphilus		41
genus	Algivirga		1
genus	Algorimarina		1
genus	Algoriphagus		114				1					3
genus	Aliarcobacter	50	3	1							1	4
genus	Alicycliphilus	10	1					3				1
genus	Alicyclobacillus	2	117		3		3			4		3
genus	Aliicoccus		1
genus	Aliidiomarina		15
genus	Aliifodinibius		191
genus	Aliihoeflea		1
genus	Aliivibrio						1					1
genus	Alishewanella	216	53					2
genus	Alistipes		1076	733	33	31	14	11	14	10	7	4
genus	Alkalibacillus	88	5
genus	Alkalibacter		95				2			3
genus	Alkalibacterium	427	5		1		1				7
genus	Alkalibaculum		209				1			2
genus	Alkalicoccus		34
genus	Alkaliflexus		41							3
genus	Alkalihalobacillus	16	23	8			1					3
genus	Alkalilimnicola											1
genus	Alkalimarinus		16
genus	Alkaliphilus	1277	289		4		7			6	7	4
genus	Alkalispirillum			1
genus	Alkalispirochaeta		1
genus	Alkalitalea											1
genus	Alkanibacter		1
genus	Alkanindiges	1	3
genus	Allisonella		192	68	3	2
genus	Alloactinosynnema											4
genus	Allobacillus									2
genus	Allobaculum	104	166	8		2				2
genus	Allocatelliglobosispora		1
genus	Allochromatium	71										1
genus	Allofrancisella		6									1
genus	Allofustis		27	2			2
genus	Allohahella	146	78				2
genus	Alloiococcus	4	77	1
genus	Allokutzneria		1									1
genus	Alloprevotella	9	409	83	2		3			1	1
genus	Alloscardovia	73	157	19		2
genus	Allosphingosinicella		14
genus	Alsobacter		2
genus	Alteracholeplasma	23	40				1				1	1
genus	Altererythrobacter		18	2			1					4
genus	Alteribacillus		2
genus	Alteribacter		13
genus	Alterileibacterium				2					6
genus	Alterococcus		29							1
genus	Alteromonas		23				1					4
genus	Altibacter		1
genus	Alysiella		4
genus	Amaricoccus	43	3								2
genus	Amedibacillus	830	340			11	1		1	6	2
genus	Aminicella		597							1
genus	Aminiphilus	120	5								5
genus	Aminipila					1	1					4
genus	Aminivibrio		62
genus	Aminobacter	7	1									1
genus	Aminobacterium	49	14							4		1
genus	Aminomonas		50									4
genus	Ammonifex	448	7							1
genus	Ammoniphilus	49	33
genus	Amoebophilus	1147	3				1				5	1
genus	Amphibacillus		24									4
genus	Amphritea	33	3
genus	Amycolatopsis	14	4				1				1	4
genus	Amylibacter		3
genus	Amylolactobacillus									2
genus	Anabaena		2									3
genus	Anabaenopsis											1
genus	Anaerobacillus	294	1	20
genus	Anaerobacter			59
genus	Anaerobacterium		32	47	3		1			4
genus	Anaerobiospirillum	6	25			2
genus	Anaerobium		302		19		1			9
genus	Anaerobranca	1009	440				5			6	7
genus	Anaerobutyricum		1012	1	32	27	6		12	9		4
genus	Anaerocella		165
genus	Anaerococcus	577	608	373	5	1	1	5		8		4
genus	Anaerocolumna		879		8		4			5
genus	Anaerofilum	1280	562	249	8	4	2			11	7
genus	Anaerofustis	238	657	203		7	1			6
genus	Anaeroglobus		556	14						6
genus	Anaerolinea	91	69	4			1			2		1
genus	Anaeromassilibacillus				9	6	1
genus	Anaeromusa	124	17							2
genus	Anaeromyxobacter	1	606			1	1					1
genus	Anaerophaga		11							1
genus	Anaeroplasma	126	166	48	1					1	2
genus	Anaerorhabdus		21
genus	Anaerosacchariphilus		1		13
genus	Anaerosalibacter		223
genus	Anaerosinus		20	34						2
genus	Anaerosphaera		121							2
genus	Anaerospora	3	172
genus	Anaerosporobacter		598	550	5	1	1
genus	Anaerostipes	1138	1102	780	36	32	16	12	13	11	7	4
genus	Anaerotaenia				3		1
genus	Anaerotignum		1008		21	6	5		3	10		4
genus	Anaerotruncus	1255	899	730	29	20	10	7		11	7
genus	Anaerovibrio	1155	11	9		1	3			8	1
genus	Anaerovorax		43	276	13		1			3
genus	Anaplasma		7									1
genus	Ancylobacter	7
genus	Anderseniella		1									4
genus	Andreesenia		7
genus	Andreprevotia		1
genus	Aneurinibacillus	4	48				1					1
genus	Angelakisella				21	5
genus	Annandia											2
genus	Annwoodia		1
genus	Anoxybacillus	102	44	3			1	1		1	1	1
genus	Anoxybacter						1			1		4
genus	Anoxynatronum		666							3
genus	Anseongella						1
genus	Antarctobacter											1
genus	Apibacter						1					1
genus	Apilactobacillus		8									3
genus	Aquabacterium	7	56	5						1		1
genus	Aquamicrobium		12
genus	Aquaspirillum		33
genus	Aquibacter		7	1
genus	Aquicella		9
genus	Aquiflexum		11									1
genus	Aquihabitans		16
genus	Aquiluna		1
genus	Aquimarina	5	21				1					4
genus	Aquimonas	7	18
genus	Aquincola		9
genus	Aquipuribacter		5
genus	Aquirhabdus											1
genus	Aquisalibacillus		1
genus	Aquisalimonas		67
genus	Aquisphaera		2
genus	Aquitalea	13	2				1					4
genus	Arabia		1		1		1
genus	Arachidicoccus						1					3
genus	Arachnia	1		1		2	1
genus	Arcanobacterium	43	30	31	1		1				2
genus	Archaeoglobus		1
genus	Archangium		12									1
genus	Arcicella		95							2
genus	Arcobacter	76	20	1			1				1	4
genus	Arcobacter group	54	18	1			1				1	4
genus	Arcticibacterium											1
genus	Ardenticatena		16				2
genus	Arenibacter	4	1									3
genus	Arenimonas	5	35
genus	Arhodomonas		11
genus	Aridibacter		18
genus	Armatimonas		1
genus	Aromatoleum											1
genus	Arsenicicoccus											1
genus	Arsenophonus	27	29									1
genus	Arthrobacter	150	4	10	1		1			2	1	4
genus	Arthromitus						1					4
genus	Arthronema	7	1
genus	Arthrospira	16	4	1								1
genus	Asaccharobacter			11		1					7
genus	Asaccharospora			99			1
genus	Asaia		4									1
genus	Asinibacterium		10
genus	Aspergillus						1				1
genus	Asteroleplasma		271	73	1					3
genus	Asticcacaulis	486	55							1	1	1
genus	Atelocyanobacterium											1
genus	Atlantibacter											1
genus	Atopobacter		7
genus	Atopobium	444	353	98	3	3				4	3	1
genus	Atopococcus		15
genus	Atopomonas		6
genus	Atopostipes		71				2
genus	Aurantiacibacter		9									1
genus	Aurantimicrobium											1
genus	Aurantimonas	12
genus	Auraticoccus		3									3
genus	Aureibacter		5
genus	Aureicoccus		1
genus	Aureimonas		12									1
genus	Aureispira		1
genus	Aureitalea											3
genus	Auricoccus											1
genus	Auritidibacter											1
genus	Austwickia											1
genus	Avibacterium	140	69				2				4	1
genus	Azoarcus	78	4		1		1					1
genus	Azohydromonas	10	2
genus	Azomonas	4
genus	Azonexus		21							1
genus	Azorhizobium	6	2
genus	Azorhizophilus	2
genus	Azospira	9	3	9			1					1
genus	Azospirillum	247	332		2		1		3	7	2	4
genus	Azotobacter		4									1
genus	Babela											2
genus	Bacillus	7	6		1						1
genus	Bacillus	855	470	66	27	1	2	8		8	6	4
genus	Bacteria		1
genus	Bacterioplanes		1									1
genus	Bacteriovorax	8	31			1
genus	Bacteroides	1298	1105	784	35	32	21	18	15	11	7	4
genus	Baia		89
genus	Balneatrix		13
genus	Balneola	58	194
genus	Bariatricus					1				3
genus	Barnesiella		878	412	4	13	7	2	5	9		4
genus	Barrientosiimonas		28
genus	Bartonella	37	11				1					4
genus	Basfia		4				1					1
genus	Basilea		3									1
genus	Bdellovibrio	14	10				1			1	1	1
genus	Beduini				1		1
genus	Beggiatoa	2	1									1
genus	Beijerinckia	2										1
genus	Belliella		19									3
genus	Bellilinea	4	1
genus	Belnapia		4	1
genus	Bergeyella	21		5
genus	Bernardetia		84									1
genus	Berryella Wylensek et al. 2020					3	1					1
genus	Beutenbergia											1
genus	Bibersteinia	3					1					1
genus	Bifidobacterium	1286	1103	812	36	31	20	18	12	11	6	4
genus	Bigelowiella						2			2
genus	Bilophila	1170	4	605	32	19	12	14	11	11	7
genus	Biomaibacter											1
genus	Biostraticola		26
genus	Bisgaardia		70				1
genus	Bittarella				8	6	2
genus	Bizionia	2	2
genus	Blastocatella			1
genus	Blastochloris	5										1
genus	Blastococcus	3	1	1								1
genus	Blastocystis			2
genus	Blastomonas	8										1
genus	Blastopirellula		17
genus	Blattabacterium						1					4
genus	Blautia	1298	1105	789	36	31	20	18	15	11	7	4
genus	Blochmannia	328									6	4
genus	Bogoriella		11
genus	Bombilactobacillus		104
genus	Bombiscardovia		15						11
genus	Bordetella		47				1					4
genus	Borrelia	17	2									4
genus	Borreliella											4
genus	Bosea		7	1			1					4
genus	Bosea	3
genus	Boseongicola		2
genus	Boudabousia		18
genus	Bounagaea									1
genus	Bowdeniella		21
genus	Bowmanella		61
genus	Brachybacterium	186	20	5			1					1
genus	Brachymonas		3
genus	Brachyspira	23		13			1					4
genus	Brackiella		15
genus	Bradymonas											1
genus	Bradyrhizobium	31	2	10			1				1	4
genus	Brassicibacter		731		4		3			5
genus	Brenneria	47	394				1				3	1
genus	Breoghania											1
genus	Brevefilum											1
genus	Brevibacillus	122	76		1		1	1				4
genus	Brevibacterium	96	99	60			1	1			7	4
genus	Brevifollis		18
genus	Brevinema		5							1
genus	Brevirhabdus											1
genus	Brevundimonas	31	38	7			1	3		2		4
genus	Breznakia									3
genus	Breznakibacter		16							2
genus	Brochothrix	765	17				1			1	1	1
genus	Brockia		23
genus	Brucella	12	1	4						1		2
genus	Bryobacter		19
genus	Buchnera						1					4
genus	Bulleidia	249	55	2						2	5
genus	Burkholderia	364	32	1	11		1	1			5	4
genus	Buttiauxella		130									1
genus	Butyribacter					1		1	1
genus	Butyricicoccus		633	77	34	29	5	1	12	8
genus	Butyricimonas	1001	892	455	29	12	11	15	6	9	7	4
genus	Butyrivibrio	851	1075	416	28	27	10	3		9	7	4
genus	Bythopirellula		6
genus	Caballeronia		21									4
genus	Caedibacter		3
genus	Caenispirillum		24
genus	Caldalkalibacillus		135							2
genus	Caldanaerobacter	54	107	1						1		1
genus	Caldanaerobius		37							3
genus	Caldanaerovirga		5
genus	Caldibacillus	1								1		3
genus	Caldicellulosiruptor	1177	79		1		4			8	6	4
genus	Caldicoprobacter		36	119
genus	Caldilinea	420	9								7	3
genus	Caldimicrobium		2									1
genus	Caldimonas		24
genus	Caldinitratiruptor		260							7
genus	Caldisalinibacter		474							2
genus	Caldisericum		5									1
genus	Calditerricola		2
genus	Calditerrivibrio		3							1		1
genus	Caldithrix	249	10								7	1
genus	Calochaete		15
genus	Caloramator	1270	727	1	9	2	9			9	7
genus	Caloranaerobacter						2			7
genus	Caloribacterium		13
genus	Calothrix	525	99								6	4
genus	Camelimonas		3
genus	Caminibacter	1	3							2
genus	Caminicella	22	673							3
genus	Campylobacter	480	404	263	7	3	2	7		6	7	4
genus	Candidatus Azobacteroides	67										4
genus	Candidatus Desulforudis						1
genus	Candidatus Methanoregula Brauer et al. 2006		1
genus	Candidatus Nitrosoglobus											1
genus	Candidatus Tenderia Eddie et al. 2016						1
genus	Candidatus Velamenicoccus Kizina et al. 2022											1
genus	Candidatus Viadribacter Braun and Szewzyk 2016											4
genus	Candidatus Walczuchella											1
genus	Candidimonas		1
genus	Canicola		58
genus	Canis									1
genus	Capnocytophaga	14	12	2			1			1	1	4
genus	Caproiciproducens		1		29		1			9		4
genus	Carboxydocella	722	31				4			3	2	1
genus	Carboxydothermus		13									4
genus	Carboxylicivirga		263		1					1
genus	Cardinium											1
genus	Cardiobacterium	28	119	2			1
genus	Carnimonas		16
genus	Carnobacterium	49	5	8			1		1		2	4
genus	Carsonella											1
genus	Casaltella		679		3					6
genus	Castellaniella											1
genus	Catabacter		149	98		1			1	8	6
genus	Catellatispora	1
genus	Catellicoccus		1
genus	Catenibacterium	400	356	292		14	2	8		2	2
genus	Catenisphaera		78		1		2
genus	Catenovulum		1									1
genus	Catenulispora		3									4
genus	Catonella	868	1069	1	16	1	3			6	4
genus	Caulobacter	9	15	1			1					4
genus	Cecembia		15
genus	Cedecea		95				1
genus	Celeribacter											3
genus	Celerinatantimonas		6
genus	Cellulomonas	18	87			4	1					4
genus	Cellulophaga		4				2					4
genus	Cellulosibacter		112
genus	Cellulosilyticum		1010	15	2		1			10		4
genus	Cellulosimicrobium	2						1				1
genus	Cellvibrio	7	46				1					3
genus	Cenarchaeum DeLong and Preston 1996	1
genus	Centipeda			6
genus	Cerasicoccus	303	198				1			3	1
genus	Cereibacter	1	9				1					2
genus	Cesiribacter		35
genus	Cetobacterium	74	51	4		2					1
genus	Chamaesiphon		5									3
genus	Chania		12									3
genus	Chelativorans	1	9									1
genus	Chelatococcus	4										1
genus	Chelonobacter	35	2								1
genus	Chiayiivirga		1
genus	Chishuiella		5
genus	Chitinilyticum		3
genus	Chitinimonas		20							1
genus	Chitinispirillum		13							2
genus	Chitinivibrio		2
genus	Chitinivorax		11
genus	Chitinophaga	40	33			3	1					4
genus	Chlamydia	1	2				1					1
genus	Chloracidobacterium		14									3
genus	Chlorobaculum	1054	6				1			1	2	4
genus	Chlorobium		4				1					1
genus	Chloroflexus		2									1
genus	Chlorogloeopsis		10
genus	Chloroherpeton	6	21
genus	Chondrocystis											1
genus	Chondromyces	51	1
genus	Christensenella		244	179	16	26	3	2		10	7	4
genus	Chromatium	270	3
genus	Chromobacterium	125	10				1				1	4
genus	Chromohalobacter	1										1
genus	Chroococcidiopsis	1					1					1
genus	Chroococcus	529	2								2
genus	Chryseobacterium	101	41	2			1	1			6	4
genus	Chryseolinea		30									4
genus	Chryseomicrobium		20							2
genus	Chthoniobacter	22	12
genus	Chthonomonas	5	100									3
genus	Citreitalea		1
genus	Citricoccus	2	1
genus	Citrifermentans	1	8				2
genus	Citrobacter	233	16	55	17	7	3	4		10	3	4
genus	Citromicrobium											3
genus	Clavibacter			1								4
genus	Cloacibacillus	111	136	106		1	2	1		1		1
genus	Cloacibacterium		17	2			1	1				3
genus	Cloacimonas											1
genus	Clostridiisalibacter		7
genus	Clostridioides		84	488	3	31	7			5	6	4
genus	Clostridium	1297	1098	778	35	31	20	17	1	11	7	4
genus	Cnuella		3
genus	Cobetia											1
genus	Cocleimonas		2
genus	Coenonia		2
genus	Cognaticolwellia Liu et al. 2020											1
genus	Cohaesibacter		1									1
genus	Cohnella	414	53				3			3	7	4
genus	Coleofasciculus		1
genus	Colidextribacter		1		23					9
genus	Collimonas	6	32				1					4
genus	Collinsella	1055	945	770	32	21	6	14		7	7	4
genus	Colwellia		36				1					4
genus	Comamonas	114	37	22			1	8			1	3
genus	Commensalibacter		2
genus	Companilactobacillus	169	134	1	1		1					4
genus	Conchiformibius	4	1
genus	Conexibacter	6	8
genus	Confluentimicrobium											1
genus	Congregibacter		5
genus	Constrictibacter		2							1
genus	Contubernalis	180									5
genus	Coprobacillus	1268	552	154	5	25	5	3		2	7
genus	Coprobacter		667	337	9	9	2	1		5
genus	Coprococcus	1294	1104	2	31	31	20	17	2	11	7
genus	Coprothermobacter	11	48	7
genus	Coraliomargarita	368	73									1
genus	Corallibacter		1
genus	Corallococcus											4
genus	Coriobacterium	101	22		2		1					3
genus	Corticibacter		4
genus	Corynebacterium	643	623	445	8	13	2	7		9	1	4
genus	Couchioplanes	1	12
genus	Coxiella		24									1
genus	Crassaminicella						1
genus	Craurococcus			2
genus	Crenothrix	2
genus	Criblamydia		43
genus	Crinalium		1									1
genus	Croceibacter		7									1
genus	Croceibacterium											1
genus	Croceicoccus											1
genus	Cronobacter		84	83			2			1		4
genus	Cruoricaptor		52	1
genus	Cryobacterium		2	11								1
genus	Cryomorpha		86
genus	Cryptanaerobacter		1
genus	Cryptobacterium		354	1			1			3		1
genus	Cryptococcus							13
genus	Cryptosporangium	1
genus	Cryptosporidium						1
genus	Cucumibacter		2
genus	Culturomica									8
genus	Cuneatibacter									10
genus	Cupidesulfovibrio	1	13
genus	Cupriavidus	10	58	1			1			1		4
genus	Curtobacterium	11		1			1					1
genus	Curvibacter	36	7	6			1				2
genus	Cutibacterium	7	11	29			1				1	1
genus	Cyanobacterium	200	31								1
genus	Cyanobium		4	1			1					1
genus	Cyanothece											1
genus	Cyclobacterium		64									4
genus	Cycloclasticus	14	22				1					1
genus	Cyclonatronum											3
genus	Cylindrospermum		1
genus	Cystobacter	41	41									1
genus	Cytobacillus	99				1	1					4
genus	Cytophaga		55							2		1
genus	Dactylococcopsis											3
genus	Dactylosporangium	18	5
genus	Dasania		23
genus	Dechloromonas	113	9				1
genus	Deefgea	1	6
genus	Deferribacter	150	36								4	4
genus	Deferrisoma		23							1
genus	Defluviicoccus		9							1
genus	Defluviimonas		3	1
genus	Defluviitalea		221	2			3			3
genus	Defluviitoga		5									1
genus	Dehalobacter	1	213		3		1					4
genus	Dehalobacterium	535	2	9			2	7			3	1
genus	Dehalococcoides	2	57			1	1			1		1
genus	Dehalogenimonas	87	160							1		4
genus	Deinococcus	610	146	6	1		1			1	4	4
genus	Delftia	21	7	64								3
genus	Dellaglioa		94	11
genus	Demequina	6	55							1
genus	Dendrosporobacter		52
genus	Denitratisoma	154	11	1
genus	Denitrobacter	4
genus	Denitrobacterium			1	6		1					1
genus	Denitrovibrio											3
genus	Dependoparvovirus									2
genus	Dermabacter	38	60	52					1			1
genus	Dermacoccus	9	1			1		1				1
genus	Dermatophylus	1
genus	Derxia		46
genus	Desemzia	2	246
genus	Desertibacter		5
genus	Deserticella		6
genus	Desmospora		5
genus	Desulfacinum	60	2
genus	Desulfallas		36				3					1
genus	Desulfarculus		136									1
genus	Desulfatibacillum		3				1					1
genus	Desulfatiferula		19
genus	Desulfatiglans		11
genus	Desulfatirhabdium		1
genus	Desulfatitalea		8
genus	Desulfitibacter	3	100	1			2			1
genus	Desulfitispora		33							2
genus	Desulfitobacterium	225	104	1			1				3	4
genus	Desulfobacca	1	23							1		1
genus	Desulfobacter	86	14				4				2	3
genus	Desulfobacterium	1	316				1			1		1
genus	Desulfobacula		1									3
genus	Desulfobaculum		12
genus	Desulfobotulus		6
genus	Desulfobulbus	7	83				1					1
genus	Desulfocapsa	6	2									1
genus	Desulfocarbo		134
genus	Desulfocella		306	1			2			6
genus	Desulfococcus	6	3				1					4
genus	Desulfoconvexum		1
genus	Desulfocurvibacter		1				1
genus	Desulfocurvus		3
genus	Desulfofaba	6	39
genus	Desulfofarcimen	41	245				1					4
genus	Desulfofrigus	133	49
genus	Desulfofundulus	203	98				1
genus	Desulfofustis		11
genus	Desulfoglaeba		257
genus	Desulfohalobium		3									3
genus	Desulfohalophilus		1
genus	Desulfohalotomaculum	128	748				1			1
genus	Desulfohalovibrio	3	80
genus	Desulfomicrobium	84	250				1			7		4
genus	Desulfomonile	197	15								1	1
genus	Desulfonatronobacter		5
genus	Desulfonatronovibrio	184	8								2
genus	Desulfonatronum	260	43								2
genus	Desulfonauticus	73	26								7
genus	Desulfonema		26							2
genus	Desulfonispora		95
genus	Desulfopila		1				1
genus	Desulfoplanes		29
genus	Desulforegula		78				2
genus	Desulforhabdus		1
genus	Desulforhopalus	3
genus	Desulfosalsimonas		2
genus	Desulfosarcina	86	20				1
genus	Desulfoscipio Watanabe et al. 2020		8				1					1
genus	Desulfosoma		134				2
genus	Desulfosporosinus	577	211	1	1		1			4	7	4
genus	Desulfotalea	5	1
genus	Desulfothermus		14
genus	Desulfotignum	2
genus	Desulfotomaculum	689	878	2	9	4	2			8	7	4
genus	Desulfovibrio	1073	950	382	20	7	11	10	6	10	7	4
genus	Desulfovirga		27
genus	Desulfurella	5	6									1
genus	Desulfuribacillus		7				1
genus	Desulfurispira		3
genus	Desulfurispirillum	228					1					1
genus	Desulfurispora	686	586				2			2	2
genus	Desulfurivibrio		2									1
genus	Desulfurobacterium		6									1
genus	Desulfurococcus	1
genus	Desulfuromonas	59	55				2					1
genus	Desulfuromusa	606	4				1				5
genus	Dethiobacter	46	8	1			2			3	1
genus	Dethiosulfatibacter		316							2
genus	Dethiosulfovibrio	707	102				1			2	6
genus	Devosia	410	63					1				4
genus	Devriesea											1
genus	Dialister	853	969	475	10	11	10	14	4	9	5	4
genus	Diaphorobacter	7	5				1			1
genus	Dichelobacter	1										1
genus	Dichotomicrobium		11
genus	Dickeya	24	45		1		1					4
genus	Dictyoglomus		74			2						1
genus	Dielma		601	308	9	14	1			7
genus	Dientamoeba			1
genus	Dietzia	68	142	1								1
genus	Dinoroseobacter											1
genus	Diplorickettsia		13
genus	Dispar									1
genus	Dissulfuribacter		10
genus	Dokdonella	505	41							1	1	1
genus	Dokdonia		23									4
genus	Dolichospermum	855	2								7	1
genus	Dolosicoccus		7							1
genus	Dolosigranulum		200							1
genus	Dongia		177							3
genus	Dorea	1283	1090	779	35	32	21	18	13	10	7
genus	Draconibacterium		31									1
genus	Drancourtella					3				10
genus	Duganella		3							1
genus	Duncaniella						1					4
genus	Duodenibacillus				7				1	2
genus	Dyadobacter	349	68				1				4	4
genus	Dyella	1	8							1		1
genus	Dysgonomonas	1040	707	10	4		7	2		7	7
genus	Dysosmobacter					8	1
genus	Echinicola		52				1					4
genus	Ectobacillus		26							2
genus	Ectothiorhodosinus		4
genus	Ectothiorhodospira	212	43									1
genus	Edaphobacter	150									1
genus	Edwardsiella	73	29				1
genus	Edwardsiella	36										1
genus	Effusibacillus		188							5
genus	Eggerthella	953	906	575	24	31	8	8	5	10	6	4
genus	Eggerthia		392	1						1
genus	Egibacter											1
genus	Egicoccus											1
genus	Ehrlichia	330	9				1			1	2	1
genus	Eikenella	7	6	5			1				2	1
genus	Eionea		1
genus	Eisenbergiella		832	518	24	3	5		7	10	6
genus	Eisenibacter		137
genus	Ekhidna		1
genus	Elioraea		3
genus	Elizabethkingia	4	21				1					4
genus	Elstera		3
genus	Elusimicrobium	7	60	7						1		1
genus	Emcibacter		139
genus	Emergencia					2			1	10
genus	Empedobacter		8									1
genus	Emticicia	910	151		2		1			2	5
genus	Endobacter		1
genus	Endobugula	86
genus	Endolissoclinum											1
genus	Endomicrobium											1
genus	Endozoicomonas		5									1
genus	Enhydrobacter	29
genus	Enorma		101	68	3	2	1			1
genus	Ensifer		3				1					1
genus	Enterobacter	548	61	208	9	6	5	15		6	7	4
genus	Enterocloster		986	2	33	28	5		4	10		4
genus	Enterococcus	1039	190	138	27	27	6	9	5	5	4	4
genus	Enterorhabdus		333	263	7	12			7	1
genus	Enteroscipio					2
genus	Enterovibrio											1
genus	Entomomonas											1
genus	Entomoplasma	8	20							2		4
genus	Epibacterium											1
genus	Epilithonimonas	5	3									1
genus	Epulopiscium			59	3			1
genus	Ercella		282
genus	Ereboglobus											3
genus	Eremococcus		26	21						1
genus	Eremococcus		1	11
genus	Erwinia	319	181	1	1		2	11		1	2	4
genus	Erysipelatoclostridium		1099	756	35	28	6		9	10	7	4
genus	Erysipelothrix	1076	664		3		9			5	7	3
genus	Erythrobacter	91	14				1	1				1
genus	Erythromicrobium	11
genus	Escherichia	1050	63	1	11	24	7	1	6	1	6	4
genus	Ethanoligenens	626	886				4			10		4
genus	Eubacterium	1228	1105	151	36	32	12	13	12	10	7	4
genus	Eudoraea		51
genus	Euryhalocaulis		8
genus	Euzebya	717	42				1			1		1
genus	Euzebyella											1
genus	Evansella											1
genus	Evtepia					9	3
genus	Exiguobacterium	20	34				1				3	4
genus	Exophiala						1
genus	Extensimonas		1
genus	Extibacter									7
genus	Ezakiella		289				3			3		1
genus	Fabibacter		6
genus	Facklamia	123	820	50			2	1		6
genus	Faecalibacterium	1298	1104	772	35	32	18	18	4	1	7	4
genus	Faecalibaculum						1					1
genus	Faecalicatena		651		21		2
genus	Faecalicoccus		664		3	1	3			5
genus	Faecalimonas					1
genus	Faecalitalea	129	128		18	18	5					4
genus	Falcatimonas		1		14		1
genus	Falsiporphyromonas		268				2
genus	Falsirhodobacter		1
genus	Fangia		12
genus	Fannyhessea		154	2
genus	Fastidiosipila		93	74	1		1					3
genus	Fenollaria		547		4	2				6
genus	Fermentimonas						1					4
genus	Ferrimicrobium	13	2								1
genus	Ferrimonas	12	40									1
genus	Ferrithrix		172
genus	Ferrovibrio		2
genus	Ferrovum		2
genus	Ferruginibacter		59
genus	Fervidicella		8							1
genus	Fervidobacterium	13									1	4
genus	Fibrella						1					3
genus	Fibrobacter	102	235	85			2					1
genus	Fictibacillus		34				1					4
genus	Filifactor	382	364		18		1			1		3
genus	Filimonas											4
genus	Filomicrobium		2
genus	Fimbriimonas	2	25									1
genus	Finegoldia	653	787	443	5	3	2	4		8	1	3
genus	Fischerella											1
genus	Flagellimonas		1									1
genus	Flammeovirga	287	28				1			1		4
genus	Flaviaesturariibacter		1
genus	Flavicella		4
genus	Flaviflexus		21				1					3
genus	Flavihumibacter		3
genus	Flavilitoribacter		7
genus	Flavisolibacter	28	1	1			1			1		4
genus	Flavitalea		9
genus	Flavivirga											1
genus	Flavobacterium	49	39	394			5				7	4
genus	Flavonifractor		1072	768	31	31	10		1	10	7	4
genus	Flectobacillus		82
genus	Flexibacter		8	1	2
genus	Flexispira Bryner 1987	3
genus	Flexistipes		61									1
genus	Flexithrix		11
genus	Flintibacter				25	1	2			9
genus	Fluoribacter											1
genus	Fluviicola		17		3		1					1
genus	Fluviimonas		413							1
genus	Fluviispira											3
genus	Fodinibius		5				2
genus	Fodinicurvata		428		1					8
genus	Fontibacillus		2
genus	Fontibacter		32
genus	Fonticella		132	2
genus	Formosa	2										4
genus	Fournierella		1		16	4	1
genus	Francisella	53	60	2			2				1	4
genus	Franconibacter		10
genus	Frankia	2					1					4
genus	Frateuria		3									1
genus	Frederiksenia		2				1
genus	Fretibacter		14
genus	Fretibacterium		4	98			1
genus	Friedmanniella	20	26								1	1
genus	Frigoribacterium	1
genus	Frischella		2				1					3
genus	Frisingicoccus									8
genus	Frondihabitans											1
genus	Fructilactobacillus	54	77	1			1					1
genus	Fructobacillus	62	31
genus	Fuchsiella		10							1
genus	Fucophilus		2
genus	Fulvibacter		1
genus	Fulvimarina		1
genus	Fulvitalea		60
genus	Fulvivirga	6	88
genus	Furfurilactobacillus	527	34				1				1
genus	Fuscovulum Suresh et al. 2019									1		3
genus	Fusibacter	84	199				3			6	6
genus	Fusicatenibacter		1088	760	17		4	1	11
genus	Fusobacterium	572	519	121	5	4	1	2		4	6	4
genus	Gabonia Mourembou et al. 2015								1
genus	Gabonibacter				10		1			2
genus	Gaetbulibacter			1
genus	Gaiella		40				2
genus	Galenea		40				2
genus	Gallaecimonas		4
genus	Gallibacterium	23	67	1			1				1	1
genus	Gallicola		68	70				1
genus	Gallionella	158	23					2				1
genus	Garciella		12				2
genus	Gardnerella	71	145	40	1	1				2		1
genus	Garicola		2
genus	Garritya		2
genus	Gelria		2	211			2
genus	Gemella	1183	615	153	3	16	5			6	6	4
genus	Geminicoccus		53							2
genus	Geminisphaera		9
genus	Geminocystis											1
genus	Gemmata	7	12	1								1
genus	Gemmatimonas	8	21									1
genus	Gemmatirosa		8									1
genus	Gemmiger		994		16	9	7			9
genus	Gemmobacter		2							1		4
genus	Geoalkalibacter		11									1
genus	Geobacillus	416	55	7	11		1	1		1	3	1
genus	Geobacter	78	49				5				1	4
genus	Geodermatophilus	5	7							1		2
genus	Geofilum		116
genus	Geomicrobium		21
genus	Geopsychrobacter		6
genus	Georgenia	9	34
genus	Georhizobium											1
genus	Geosporobacter						2					4
genus	Geothermobacter		2
genus	Geothermomicrobium									2
genus	Geothrix	599	410				2			3
genus	Geotoga		1
genus	Geovibrio	13	1									3
genus	Gibbsiella											4
genus	Giesbergeria	11	1
genus	Gilliamella											1
genus	Gillisia	788	27								1	1
genus	Gilvimarinus		1
genus	Gimesia		2
genus	Glaciecola	178	64									3
genus	Glaciimonas		2
genus	Glaesserella		4				1					1
genus	Gleimia	35	37	1
genus	Globicatella		19	2						1
genus	Gloeobacter		9				1			1		1
genus	Gloeothece		1
genus	Gloeotrichia	3
genus	Glomeribacter	549	2								3
genus	Gluconacetobacter	5	7									1
genus	Gluconobacter	92	3				1					1
genus	Glutamicibacter	101	58								1
genus	Glycocaulis		1									1
genus	Glycomyces	60	12								1
genus	Gorbachella		1		1		1
genus	Gordonia	44	66	1			1					4
genus	Gordonibacter		620	457	24	23	2		1	7		1
genus	Gottschalkia		152				4			3		4
genus	Gracilibacillus		137							1
genus	Gracilibacter		464	3	2		3			6
genus	Gracilimonas		299				2			3
genus	Gramella	53	2				1				6	4
genus	Granulibacter											4
genus	Granulicatella	603	151	320		13	2	3		5	5
genus	Granulicella	83	16				1
genus	Granulosicoccus		76									1
genus	Gryllotalpicola		7									1
genus	Gudongella						1					1
genus	Guggenheimella		380				2			6
genus	Gulbenkiania		5
genus	Gullanella											2
genus	Gulosibacter	48	5	29						1
genus	Guyparkeria	10	1
genus	Gynuella		39									1
genus	Haematobacter											3
genus	Haematospirillum											2
genus	Haemophilus	971	822	528	21	16	5	17	5	5	6	4
genus	Hafnia			14	2		4					1
genus	Hahella	149	192							1		3
genus	Halanaerobacter	8	4								4
genus	Halanaerobaculum		6
genus	Halanaerobium	256	11				1			1	2	4
genus	Halarcobacter		9				1					2
genus	Halarsenatibacter		69
genus	Haliangium	111	23									3
genus	Haliea		7
genus	Halioglobus		1									1
genus	Haliscomenobacter		73									3
genus	Halobacillus		25				1					4
genus	Halobacteriovorax	7	34				1					4
genus	Halobacteroides		8									1
genus	Halobaculum	2
genus	Halocella		9				1					4
genus	Halochromatium	72	192				2
genus	Halodesulfovibrio		5
genus	Haloechinothrix		3
genus	Haloferax	1
genus	Haloferula		34				2
genus	Haloglycomyces		1
genus	Halolactibacillus		10
genus	Halomicroarcula		1
genus	Halomicronema		1									3
genus	Halomonas	127	432		1	1	3			1	3	4
genus	Halonatronum		5
genus	Haloplasma		34	1						2
genus	Halopolyspora		144				2
genus	Halopseudomonas		7
genus	Halorhodospira	27	82							1	2	1
genus	Halospina		8
genus	Halospirulina		1
genus	Halotalea											1
genus	Halothermothrix		156				2			5		1
genus	Halothiobacillus	16	47				2
genus	Haploplasma	55	22				1			2	2	3
genus	Harryflintia					4	1
genus	Hartmannibacter											1
genus	Hathewaya	1269	563				4			3	7
genus	Hazenella		17
genus	Helcococcus	85	159	19
genus	Helicobacter	362	32	3			1			1	1	4
genus	Heliimonas		6
genus	Heliobacterium	1	12				1		3	3		1
genus	Heliomicrobium		1				1					1
genus	Heliomonas				1		1
genus	Heliophilum		10							2
genus	Heliorestis	463	10							3	5
genus	Heliothrix		1
genus	Hellea		9
genus	Henriciella		431							4
genus	Hepatoplasma											1
genus	Hephaestia		2
genus	Herbaspirillum	504	56	250	13		2			3	3	4
genus	Herbinix		380		6		2			6		4
genus	Herminiimonas	42	182							2		4
genus	Herpetosiphon	1	5
genus	Hespellia		1065	499	15		1			10
genus	Heyndrickxia	1	2
genus	Hippea		3									1
genus	Hirschia		1
genus	Histophilus		19				1					1
genus	Hoeflea											1
genus	Holdemanella	665	600		2	17	2			5	6
genus	Holdemania	1100	936	565	23	25	5	9		11	7
genus	Holophaga		10							2
genus	Holospora					1
genus	Holzapfelia		52
genus	Homo						1
genus	Hoppeia		1
genus	Howardella		773	123	2		2			2
genus	Hoyosella		35
genus	Hugenholtzia		35				2
genus	Humibacter		19
genus	Hungateiclostridium	590	561	2	4		1			7	6	4
genus	Hungatella		1040		32	30	5		5	10	7
genus	Hwangdonia		12
genus	Hydrocarboniphaga	910	2							1
genus	Hydrocoleum	13	1
genus	Hydrogenibacillus		83		4		2			4
genus	Hydrogenispora		498
genus	Hydrogenoanaerobacterium		882	224			2
genus	Hydrogenobacter		4							1		3
genus	Hydrogenobaculum	8	1				2			4		1
genus	Hydrogenophaga	39	12	1			1			1		1
genus	Hydrogenophilus	569	213	3			1			1
genus	Hydrogenothermus		21
genus	Hydrogenovibrio	25	21									1
genus	Hydrotalea		16
genus	Hylemonella	1
genus	Hymenobacter	778	40	1			1					4
genus	Hyphomicrobium	140	18				1				4	4
genus	Hyphomonas	65	11								3	2
genus	Iamia		5
genus	Ianmoorea											3
genus	Ichthyobacterium											1
genus	Ideonella		2
genus	Idiomarina	48	11				1					1
genus	Ignatzschineria	1	6
genus	Ignavibacterium	36	41									1
genus	Ignavigranum		87	2
genus	Ihubacter				28					9
genus	Ileibacterium				3
genus	Ilumatobacter		81
genus	Ilyobacter											4
genus	Immundisolibacter											3
genus	Imperialibacter		16
genus	Imtechella		1			1
genus	Indibacter		22
genus	Indioceanicola											3
genus	Inquilinus	6	14
genus	Insolitispirillum	754	216							7
genus	Intestinibacillus				8					8
genus	Intestinibacter		884	770	19	22	3			9
genus	Intestinibaculum Kim et al. 2019						1					4
genus	Intestinimonas		1046	721	34	27	6		1	10		4
genus	Intrasporangium		2
genus	Iodobacter		7									3
genus	Ishikawaella											1
genus	Isochromatium		6
genus	Izimaplasma											1
genus	Jahnia Reichenbach 2005		1
genus	Janibacter	2										1
genus	Jannaschia	2	1									1
genus	Janthinobacterium	40	6								3	4
genus	Jatrophihabitans		6									1
genus	Jeotgalibaca						1					3
genus	Jeotgalibacillus		7				1			1
genus	Jeotgalicoccus	13	67	1								1
genus	Jiangella	16	2								1	4
genus	Jinshanibacter											3
genus	Johnsonella	1248	746	10		12	1			2	7
genus	Jonesia	24	100
genus	Jonquetella		103	10								1
genus	Kaistella		1									3
genus	Kaistia	10	36							1
genus	Kallipyga		66		1					1
genus	Kallotenue		15
genus	Kandleria		165				2
genus	Kangiella		34									1
genus	Kastovskya		2
genus	Keratinibaculum		10
genus	Ketobacter											1
genus	Ketogulonicigenium		3									1
genus	Kiloniella		50		3					2
genus	Kineococcus	4	6									1
genus	Kineosporia	6	1
genus	Kinetoplastibacterium											4
genus	Kingella	6	4	2								1
genus	Kistimonas		1
genus	Kitasatospora	36	9				1				5	4
genus	Klebsiella	381	77	144	7	13	1	12	12	10	5	4
genus	Kluyvera		14	537	4		1				7
genus	Knoellia	1
genus	Kocuria	39	27	6		1	1	1				4
genus	Kofleria		2
genus	Komagataeibacter		31				1					3
genus	Kordia		1									1
genus	Kordiimonas		2
genus	Koribacter	4										1
genus	Kosakonia	39	270				4					3
genus	Kosmotoga	10	1									1
genus	Kozakia		1									3
genus	Kribbella	67	301								5
genus	Kroppenstedtia		3				1			2
genus	Ktedonobacter		1
genus	Kurthia						1					3
genus	Kushneria	283	3								2	1
genus	Kutzneria											1
genus	Kyrpidia		114									1
genus	Kytococcus	1		2								1
genus	Labilibacter		4
genus	Labilibaculum						1					4
genus	Labilithrix		36
genus	Labrenzia						1					1
genus	Labrys	5									6
genus	Laceyella	30	5									1
genus	Lachnoanaerobaculum		1074	12		5	2			7		4
genus	Lachnobacterium	1185	756	12	28	1	6	8		9	4
genus	Lachnoclostridium		1102	2	36	30	7		11	10	3	4
genus	Lachnospira	1298	1097	713	35	32	15	18	9	11	7	4
genus	Lachnotalea				3	5
genus	Lacibacter		2	3
genus	Lacibacterium		130
genus	Lacihabitans		7
genus	Lacimicrobium											1
genus	Lacinutrix		1									4
genus	Lacrimispora		348	1	32	17	2			2		4
genus	Lacticaseibacillus	265	64	141	3	8	2		4	1	3	4
genus	Lactiplantibacillus	163	12	65		11	1		4	1	4	2
genus	Lactivibrio		2
genus	Lactobacillus	1206	1103	813	36	28	12	18	12	11	7	4
genus	Lactococcus	866	698	260	9	10	6	7	1	8	3	4
genus	Lactonifactor		721	477	27	1	4			10	7
genus	Lactovum		248
genus	Lacunisphaera											3
genus	Lagierella				1
genus	Lamprocystis		2
genus	Lancefieldella	81	85	4		2	1			2	1	1
genus	Lapidilactobacillus		4
genus	Laribacter		3									3
genus	Larkinella		1
genus	Larsenimonas		1
genus	Lascolabacillus									1
genus	Latilactobacillus		10	33		4	1			1		3
genus	Lautropia	87	46	8							1	1
genus	Lawsonella				1
genus	Lawsonia	6	597				1			1		3
genus	Lawsonibacter					8	1
genus	Leadbetterella		14									3
genus	Lebetimonas		22
genus	Leclercia						1					1
genus	Legionella	833	67	1			1			4	3	4
genus	Leifsonia		1	1			1					1
genus	Leisingera											1
genus	Lelliottia	396	2								2	4
genus	Leminorella		4									1
genus	Lentibacillus	201	56									1
genus	Lentilactobacillus	69	3	14		2	1				1	2
genus	Lentisphaera		4
genus	Lentzea	2	1									1
genus	Leptofauchea							10
genus	Leptolinea		100							2
genus	Leptolyngbya	292	1	1			1				2	4
genus	Leptonema		17							2
genus	Leptospira	347	28				2					4
genus	Leptospirillum		17									1
genus	Leptothrix	194	7					2			1
genus	Leptotrichia	58	63	29			2					4
genus	Leucobacter	18	41				1					1
genus	Leuconostoc	583	768	78	3	7	2	2		10	6	4
genus	Leucothrix	14	5								1
genus	Levilactobacillus	76	39	5		1	1				1
genus	Levilinea		1
genus	Levyella		397			2
genus	Lewinella	58	8
genus	Libanicoccus											1
genus	Liberibacter	62	2		6						7	1
genus	Lichenihabitans											1
genus	Ligilactobacillus	167	145	65		6	1			2	1	4
genus	Limibacillus		18
genus	Limibacter		1
genus	Limimaricola		2
genus	Limimonas		5
genus	Limisphaera		20				2
genus	Limnobacter	931	31	1			1	2			1
genus	Limnobaculum											1
genus	Limnochorda		1									1
genus	Limnohabitans	17	3					2
genus	Limnoraphis		3
genus	Limnospira	2
genus	Limosa									1
genus	Limosilactobacillus	203	304	75	2	6	2		2	1	1	4
genus	Liquorilactobacillus		169				1
genus	Lishizhenia		2
genus	Listeria	295	238	1		1	1	4		2		4
genus	Litoribacillus		63
genus	Litoribacter		21
genus	Litoribrevibacter		11
genus	Litoricola	79	38								3
genus	Litorilinea		10				2			2
genus	Litorilituus		83							1		4
genus	Loigolactobacillus		11				1			1
genus	Loktanella	2	6
genus	Longibaculum					4	1			3
genus	Longicatena					2				4
genus	Longilinea	7	3
genus	Longimonas		54
genus	Lonsdalea	8
genus	Luminiphilus		51
genus	Lunatimonas		2
genus	Luteibacter	732	42								3	1
genus	Luteibaculum		1
genus	Luteimonas	19	19					1				1
genus	Luteipulveratus											1
genus	Luteitalea											1
genus	Luteivirga		5
genus	Luteococcus	11									1
genus	Luteolibacter	553	30				2
genus	Lutibacter		39									4
genus	Lutibacterium	7
genus	Lutibaculum		1
genus	Lutispora		289		1		3			5
genus	Lysinibacillus	168	17	5			1	5		2	1	4
genus	Lysinimonas											1
genus	Lysobacter	248	64	1			1	2		3		4
genus	Macellibacteroides									4
genus	Macrococcus	489	9				2			1	3	3
genus	Mageeibacillus						1			6		1
genus	Magnetococcus		18				1					1
genus	Magnetospira		22									1
genus	Magnetospirillum	9	15				1					1
genus	Magnetovibrio		3							1
genus	Mahella		33				1
genus	Mailhella					3				1
genus	Malaciobacter	29					1					4
genus	Malacoplasma		86									1
genus	Maledivibacter		49							1
genus	Mammaliicoccus	4	26	1			1					1
genus	Mangrovibacter		6
genus	Mangroviflexus		1
genus	Mannheimia	541	89	8			2			1	6	1
genus	Maribacter	2	1				1					4
genus	Maricaulis	6	18
genus	Marichromatium	182	30	1
genus	Maridesulfovibrio	47	13				1				1	3
genus	Marinicauda		2