Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank Bacteria Thryve
942 Samples
BiomeSight
908 Samples
uBiome
813 Samples
SequentiaBiotech
36 Samples
CosmosId
34 Samples
AmericanGut
18 Samples
custom
17 Samples
Microba
15 Samples
BiomeSightRdp
10 Samples
Medivere
7 Samples
es-xenogene
4 Samples
1
Canidae 1
Escherichia virus phiX174 1
Euaesthetinae 1
Evacanthinae 1
Guizotia 1
mitosporic Phaeosphaeriaceae 1
Scolopacidae 1
Trapezitinae 1
Unknown 115117 1
Unknown 1247519 1
Unknown 28906 1
Unknown 302788 4
Unknown 34985 4
Unknown 34988 4
Unknown 36851 8
Unknown 469594 11
Unknown 469608 1
Unknown 755821 1
biotype Mycobacterium tuberculosis variant caprae 1
biotype Mycobacterium tuberculosis variant pinnipedii 99
clade 50 kb inversion clade 11 262 2 3 1
clade ant endosymbionts 241 6 4
clade ant, tsetse, mealybug, aphid, etc. endosymbionts 249 1 6 4
clade aphid secondary symbionts 15 1
clade asterids 18
clade Bacteria candidate phyla 199 6 3
clade Bacteroidetes/Chlorobi group 933 906 790 36 33 18 16 14 10 7 4
clade Bilateria 7 159 11 1 4 1 1 4
clade Caldiserica/Cryosericota group 1 1 1
clade Candidatus Baumannia 1
clade Candidatus Dependentiae 3
clade Candidatus Uzinura 1
clade core chlorophytes 1
clade core genistoids 11 262 2 3 1
clade Cyanobacteria/Melainabacteria group 655 851 31 18 7 4 4 7 4
clade Deuterostomia 5 1
clade Dicondylia 7 101 11 1 4 1 1 4
clade Dipnotetrapodomorpha 5 1
clade Ecdysozoa 7 101 11 1 4 1 1 4
clade Embryophyta 11 264 18 2 3 1
clade eudicotyledons 11 264 18 2 3 1
clade Eumetazoa 7 185 11 1 4 1 1 4
clade Euphyllophyta 11 264 18 2 3 1
clade Euteleostomi 5 1
clade fabids 11 262 2 3 1
clade FCB group 933 906 790 36 33 18 16 15 10 7 4
clade genistoids sensu lato 11 262 2 3 1
clade Gnathostomata 5 1
clade Gunneridae 11 264 18 2 3 1
clade lamiids 18
clade leotiomyceta 1
clade lice endosymbionts 1
clade Lophotrochozoa 177 1
clade Luna-1 subcluster 2 1 3
clade Mandibulata 7 101 11 1 4 1 1 4
clade mealybug secondary endosymbionts 1
clade Mesangiospermae 11 264 18 2 3 1
clade Metamonada 1
clade Methanomada group 208 262 220 16 3 11 3 6 7
clade Nitrospinae/Tectomicrobia group 5 3
clade OM182 clade 1
clade OMG group 1
clade Opisthokonta 7 185 11 1 13 4 1 6 4
clade Panarthropoda 7 101 11 1 4 1 1 4
clade Pancrustacea 7 101 11 1 4 1 1 4
clade Patescibacteria group 1
clade Pentapetalae 11 264 18 2 3 1
clade Protostomia 7 154 11 1 4 1 1 4
clade PVC group 869 849 567 29 17 14 16 7 10 5 4
clade Rhizaria 2 2
clade rosids 11 262 2 3 1
clade saccharomyceta 6
clade Sar 2 2 2
clade SAR116 cluster 1
clade Spermatophyta 11 264 18 2 3 1
clade Spiralia 177 1
clade Stenosarchaea group 8 8 10
clade Stramenopiles 2
clade sulfur-oxidizing symbionts 1 1
clade TACK group 3 7
clade Teleostomi 5 1
clade Terrabacteria group 933 906 792 36 33 18 16 15 10 7 4
clade Tetrapoda 5 1
clade Tracheophyta 11 264 18 2 3 1
clade Vertebrata 5 1
class Acidimicrobiia 297 115 2 2 3 1
class Acidithiobacillia 34 1
class Acidobacteriia 546 152 111 1 2 2 4
class Actinomycetia 935 902 785 35 33 17 13 12 10 7 4
class algae 2 2
class Alphaproteobacteria 906 885 438 32 4 7 3 8 10 7 4
class Amphibia 5 1
class Anaerolineae 186 376 9 5 7 4
class Anthozoa 36 1
class Aquificae 42 7 2 3 4
class Archaeoglobi 1
class Ardenticatenia 11 2 1
class Armatimonadia 1
class Bacilli 960 908 786 36 32 18 13 13 10 7 4
class Bacteroidia 960 908 790 36 33 18 16 14 10 7 4
class Balneolia 479 50 7 2 3
class Betaproteobacteria 957 906 747 36 31 18 11 12 10 7 4
class Bivalvia 122
class Blastocatellia 115 1 1 3
class Caldilineae 232 289 2 5 7 3
class Caldisericia 1 1 1
class Calditrichia 4 181 7 1
class Candidatus Babeliae 3
class Candidatus Brocadiia 10 1
class Chitinispirillia 13 2
class Chitinivibrionia 2
class Chitinophagia 746 445 5 5 1 7 6 4
class Chlamydiia 113 73 1 1
class Chlorobia 63 734 1 1 2 4
class Chloroflexia 51 2 2 14 1
class Chlorophyceae 1
class Chrysiogenetes 15 167 1
class Chthonomonadetes 93 4 3
class Clostridia 960 908 792 36 33 18 16 14 10 7 4
class Coprothermobacteria 39 10 7
class Coriobacteriia 956 901 786 36 33 18 11 10 10 7 4
class Cytophagia 819 879 7 12 3 7 6 4
class Deferribacteres 85 227 1 4 4
class Dehalococcoidia 192 74 1 1 1 4
class Deinococci 207 584 7 13 5 7 4
class Deltaproteobacteria 916 899 646 33 20 14 11 12 10 7 4
class Dictyoglomia 60 2 1
class Elusimicrobia 73 7 7 19 3 5 7 1
class Endomicrobia 1
class Epsilonproteobacteria 443 484 266 10 3 7 1 7 7 4
class Erysipelotrichia 960 906 785 36 32 17 7 8 10 7 4
class Eurotiomycetes 1
class Fibrobacteria 207 80 186 1 1
class Fimbriimonadia 23 2 1
class Flavobacteriia 516 800 458 12 3 2 2 4 7 4
class Florideophyceae 10
class Fusobacteriia 566 467 144 7 4 2 1 5 6 4
class Gammaproteobacteria 958 908 719 36 31 18 11 12 10 7 4
class Gastropoda 73 1
class Gemmatimonadetes 37 4 1 15 4 7 1
class Gloeobacteria 8 1
class Halobacteria 1 2
class Heterolobosea 4
class Holophagae 475 422 2 5
class Hydrogenophilalia 227 430 6 1 1 1
class Ignavibacteria 652 30 2 16 2 6 4
class Insecta 7 101 11 1 4 1 1 4
class Ktedonobacteria 10 68 3
class Lentisphaeria 248 283 6 2 5 2 1 5 1
class Limnochordia 1 1
class Magnoliopsida 11 264 18 2 3 1
class Methanobacteria 208 262 220 16 3 11 3 6 7
class Methanomicrobia 7 6 10
class Methylacidiphilae 8 1 1
class Mollicutes 838 879 167 25 1 2 8 9 6 4
class Negativicutes 960 904 792 34 33 17 14 13 10 7 4
class Nitriliruptoria 37 480 3 1 1
class Nitrososphaeria 1 3
class Nitrospinia 5 3
class Nitrospira 46 159 1 6 4
class Oligoflexia 80 18 1 1 1 1 4
class Oligosphaeria 37 1
class Opitutae 348 558 96 1 3 1 3 4 4
class Phycisphaerae 2 4
class Pisoniviricetes 1
class Planctomycetia 97 12 1 4
class Rhodothermia 11 13
class Rubrobacteria 91 5 2 2 3
class Saccharomycetes 6
class Saprospiria 125 45 4
class Solibacteres 30 1
class Spartobacteria 52 18
class Sphingobacteriia 557 908 18 26 4 4 8 7 4
class Spirochaetia 158 409 16 3 4 1 4
class Synergistia 359 680 236 1 1 1 1 6 7 4
class Thermoanaerobaculia 77
class Thermococci 1 2
class Thermodesulfobacteria 22 98 2 1
class Thermodesulfovibrionia Umezawa et al. 2021 1 12
class Thermoflexia 4
class Thermoleophilia 78 16 1
class Thermolithobacteria 39
class Thermomicrobia 13 2 1
class Thermoplasmata 28 36
class Thermoprotei 4
class Thermotogae 17 39 6 4
class Tissierellia 920 900 512 14 9 8 4 10 7 4
class Tremellomycetes 13
class unclassified Cyanobacteria 1
class Verrucomicrobiae 860 794 492 26 14 13 14 7 10 3 4
class Vicinamibacteria 1
class Zetaproteobacteria 28 1 1
cohort Endopterygota 4 3
cohort Paraneoptera 2 96 11 1 1
cohort Polyneoptera 7 7 1 1
family Acanthopleuribacteraceae 50
family Acaryochloridaceae 3
family Acetobacteraceae 290 281 2 1 1 1 3 4
family Acholeplasmataceae 616 827 19 15 1 5 6 4
family Acidaminococcaceae 890 842 565 22 21 13 11 9 6 7 4
family Acidiferrobacteraceae 16 4
family Acidimicrobiaceae 286 115 2 3 1
family Acidithiobacillaceae 34 1
family Acidobacteriaceae 138 151 87 2 2 4
family Acidothermaceae 42 1
family Actinomycetaceae 837 720 634 24 28 8 4 1 10 7 4
family Actinopolymorphaceae 1 57 1
family Actinopolysporaceae 150 187 4 1
family Aerococcaceae 788 383 80 2 1 2 8 7 4
family Aeromonadaceae 189 206 7 4 1 3 1 2 4
family Akkermansiaceae 929 841 811 36 27 18 16 14 9 4 4
family Alcaligenaceae 185 898 6 10 1 2 2 7 4
family Alcanivoracaceae 19 98 1
family Algiphilaceae 40
family Alicyclobacillaceae 299 2 7 2 5 4
family Alsobacteraceae 2
family Alteromonadaceae 396 297 2 1 1 4
family Amaranthaceae 3
family Amoebophilaceae 2 796 1 5 1
family Anaerolineaceae 185 141 8 5 4
family Anaeromyxobacteraceae 548 1 1
family Anaeroplasmataceae 346 84 128 3 2 1 4 2
family Anaplasmataceae 21 227 1 1 2 4
family Aphanizomenonaceae 2 596 7 4
family Aphanothecaceae 3 1
family Aphididae 1 1
family Aquificaceae 15 7 2 3 3
family Archaeoglobaceae 1
family Archangiaceae 66 27 1
family Arcobacteraceae Waite et al. 2017 20 55 1 1 4
family Ardenticatenaceae 11 2 1
family Armatimonadaceae 1
family Aspergillaceae 1
family Atopobiaceae 576 326 165 10 4 7 3 4
family Aurantimonadaceae 8 10 1
family Azonexaceae 21 87 1
family Azospirillaceae 451 462 1 2 3 6 2 4
family Bacillaceae 715 829 232 31 1 12 4 9 7 4
family Bacillales Family X. Incertae Sedis 449 902 3 4 7
family Bacillidae 6 7 1 1
family Bacteriovoracaceae 38 6 1 1 1
family Bacteroidaceae 960 907 784 35 33 18 16 14 10 7 4
family Balneatrichaceae 11
family Balneicellaceae 9
family Balneolaceae 475 50 1 2 3
family Barnesiellaceae 833 513 11 17 18 5 5 8 4
family Bartonellaceae 11 31 4
family Bdellovibrionaceae 9 12 1 1 1
family Beijerinckiaceae 9 26 4
family Bernardetiaceae 102 2 1
family Beutenbergiaceae 1
family Bifidobacteriaceae 960 903 813 36 33 18 14 14 10 7 4
family Blastocatellaceae 18 1 1
family Blastochloridaceae 5 1
family Blastocystidae 2
family Blattabacteriaceae 4
family Bogoriellaceae 39 7 1
family Borreliaceae 2 13 4
family Boseaceae 7 1 4
family Brachyspiraceae 22 13 4
family Bradymonadaceae 1
family Bradyrhizobiaceae 51 28 12 1 1 1 4
family Breoghaniaceae 1
family Brevibacteriaceae 91 60 60 1 7 4
family Brevinemataceae 5 1
family Brucellaceae 40 80 25 4 1 2 4
family Bruguierivoracaceae Li et al. 2021 26 4 4
family Bryobacteraceae 18 1
family Budviciaceae 260 9 1 4
family Burkholderiaceae 303 810 28 17 3 2 1 8 7 4
family Caedimonadaceae 1
family Caldicoprobacteraceae 32 235
family Caldilineaceae 230 289 2 5 7 3
family Caldisericaceae 1 1
family Calditrichaceae 4 181 7 1
family Caliciviridae 1
family Calotrichaceae 98 370 6 4
family Campylobacteraceae 373 360 265 7 3 7 1 5 7 4
family Candidatus Babeliaceae 3
family Candidatus Brocadiaceae 10 1
family Candidatus Competibacteraceae 156 2 1
family Candidatus Desulfofervidaceae 1
family Candidatus Methanomethylophilaceae 23
family Candidatus Midichloriaceae 1 1
family Candidatus Nanopelagicaceae 3
family Candidatus Paracaedibacteraceae 1
family Candidatus Scalinduaceae Lodha et al. 2021 10
family Cardiobacteriaceae 127 17 2 1
family Carnobacteriaceae 537 568 324 5 12 3 4 1 7 7 4
family Catabacteriaceae 128 98 1 1 1 8 6
family Catalimonadaceae 39
family Catenulisporaceae 3 4
family Caulobacteraceae 118 415 9 4 3 1 4
family Celerinatantimonadaceae 6
family Cellulomonadaceae 71 51 4 4
family Cellvibrionaceae 53 55 4
family Cesiribacteraceae 40
family Chamaesiphonaceae 5 3
family Chelatococcaceae 3 2 1
family Chitinispirillaceae 13 2
family Chitinivibrionaceae 2
family Chitinophagaceae 746 446 5 5 1 7 6 4
family Chlamydiaceae 2 1 1
family Chlorobiaceae 63 733 1 2 4
family Chloroflexaceae 1 2 1
family Chlorogloeopsidaceae 9
family Christensenellaceae 208 180 24 26 14 1 9 7 4
family Chromatiaceae 481 736 2 1 2 3 6 4
family Chromobacteriaceae 95 124 1 4
family Chroococcaceae 1 372 2 1
family Chroococcidiopsidaceae 1 1
family Chrysiogenaceae 15 168 1
family Chrysomelidae 4
family Chthoniobacteraceae 12 18
family Chthonomonadaceae 93 4 3
family Clostridiaceae 960 906 788 36 33 17 14 12 10 7 4
family Clostridiales Family XI. Incertae Sedis 217
family Clostridiales Family XVI. Incertae Sedis 23 501 3 3 2 1
family Clostridiales Family XVII. Incertae Sedis 79 36 1 6 2 4
family Coccidae 78 3
family Coelosphaeriaceae 23
family Cohaesibacteraceae 1 1
family Coleofasciculaceae 3 5
family Colwelliaceae 156 1 4
family Comamonadaceae 187 810 111 3 9 1 3 6 4
family Conexibacteraceae 8 6
family Coprobacillaceae Verbarg et al. 2014 722 895 393 5 29 11 5 4 7
family Coprothermobacteraceae 39 10 7
family Coriobacteriaceae 849 902 781 34 23 18 9 9 7 4
family Corynebacteriaceae 551 441 445 8 12 7 1 8 1 4
family Coxiellaceae 37 26 2 1 1
family Crenotrichaceae 1
family Criblamydiaceae 43
family Crocinitomicaceae 28 3 1
family Cryomorphaceae 89 1 1
family Cryptococcaceae 13
family Cryptosporangiaceae 1
family Cyanobacteriaceae 29 142 1
family Cyanobacteriaceae 29 142 1
family Cyanobiaceae Salazar et al., 2020 5 3 1 4
family Cyanothecaceae 1
family Cyclobacteriaceae 251 4
family Cytophagaceae 660 834 3 4 5 6 4
family Deferribacteraceae 98 228 1 4 4
family Defluviitaleaceae 216 18 3 3 8
family Dehalococcoidaceae 43 73 1 1 1
family Deinococcaceae 134 428 6 1 1 4 4
family Demequinaceae 47 4 1
family Dermabacteraceae 76 143 56 4
family Dermacoccaceae 25 5 2 1 1
family Dermatophilaceae 6 1
family Dermocarpellaceae 1
family Desulfallaceae Watanabe et al. 2020 177 378 2 1 7 1
family Desulfarculaceae 211 1
family Desulfobacteraceae 579 204 2 2 3 6 2 4
family Desulfobulbaceae 86 9 1 1
family Desulfocapsaceae 13 2 1
family Desulfohalobiaceae 53 178 7 3
family Desulfomicrobiaceae 224 58 6 4
family Desulfonatronaceae 43 210 2
family Desulfovibrionaceae 843 873 646 32 20 14 11 12 10 7 4
family Desulfurellaceae 8 5 1
family Desulfurobacteriaceae 6 1
family Desulfuromonadaceae 94 444 2 5 4
family Devosiaceae 63 298 1 4
family Diapheromeridae 1
family Dictyoglomaceae 60 2 1
family Dientamoebidae 1
family Dietziaceae 116 43 2 1
family Dysgonomonadaceae 605 747 46 4 2 2 6 7 4
family Ectothiorhodospiraceae 208 600 1 2 6 2 4
family Edwardsiidae 36 1
family Eggerthellaceae 934 893 774 35 33 14 11 10 10 7 4
family Egibacteraceae 1
family Egicoccaceae 1
family Elioraeaceae 3
family Elusimicrobiaceae 54 7 7 3 1 1
family Emcibacteraceae 89
family Endomicrobiaceae 1
family Endozoicomonadaceae 4 1
family Enterobacteriaceae 601 875 592 32 29 17 9 12 10 7 4
family Enterococcaceae 317 821 139 28 28 11 3 4 6 4 4
family Entomoplasmataceae 66 408 3 2 4
family Eriococcidae 1 11
family Erwiniaceae 319 235 176 4 11 1 1 2 4
family Erysipelotrichaceae 960 905 785 36 32 17 6 8 10 7 4
family Erythrobacteraceae 34 81 2 1 4
family Eubacteriaceae 960 904 299 36 33 13 12 11 10 7 4
family Eubacteriales Family XII. Incertae Sedis 496 255 18 3 7 6
family Eubacteriales Family XIII. Incertae Sedis 882 752 656 31 18 12 3 1 10 7 4
family Euzebyaceae 31 478 1 1 1
family Fabaceae 11 262 2 3 1
family Fastidiosibacteraceae 15
family Faucheaceae 10
family Ferrimonadaceae 38 7 1
family Ferrovaceae 2
family Fervidobacteriaceae 11 1 4
family Fibrobacteraceae 195 80 140 1 1
family Fimbriimonadaceae 23 2 1
family Flammeovirgaceae 329 199 1 2 1 4
family Flavobacteriaceae 466 799 455 3 1 2 2 4 7 4
family Flexibacteraceae 8 1 2
family Fortieaceae 11
family Francisellaceae 70 36 2 1 1 4
family Frankiaceae 6 1 4
family Fulvivirgaceae 147 4 2 1 4
family Fusobacteriaceae 487 424 121 7 4 2 4 6 4
family Gaiellaceae 36 2
family Gallionellaceae 30 116 2 1
family Geminicoccaceae 29 1
family Gemmataceae 15 7 1 1
family Gemmatimonadaceae 21 4 1 1
family Geobacteraceae 55 55 1 4
family Geodermatophilaceae 102 10 1 1 4
family Gloeobacteraceae 8 1
family Gloeotrichiaceae 1
family Glycomycetaceae 127 42 1 1 1
family Gomontiellaceae 89 1 1
family Gomphosphaeriaceae 23
family Gordoniaceae 60 27 1 4
family Gottschalkiaceae 126 3 3 4
family Gracilibacteraceae 406 9 3 3 6
family Granulosicoccaceae 70 1
family Hafniaceae 50 60 14 2 1 1
family Hahellaceae 170 91 2 1 3
family Halanaerobiaceae 203 165 1 2 5 2 4
family Halieaceae 59 1
family Haliscomenobacteraceae 62 3
family Haloarculaceae 1
family Halobacteriaceae 1 2
family Halobacteriovoraceae 34 5 4
family Halobacteroidaceae 318 40 2 3 4 1
family Haloferacaceae 1
family Halomonadaceae 421 317 2 1 3 1 3 4
family Haloplasmataceae 30 1 1
family Halorubraceae 1
family Halothiobacillaceae 85 16 2
family Hapalosiphonaceae 1
family Helicobacteraceae 40 261 3 1 1 4
family Heliobacteriaceae 163 385 4 1 3 6 5 1
family Herpetosiphonaceae 3 1
family Heteroleibleiniaceae 8
family Holophagaceae 438 422 2 4
family Holosporaceae 1 3
family Hungateiclostridiaceae 728 597 142 35 7 2 6 8 6 4
family Hydrogenophilaceae 230 430 5 1 1 1
family Hydrogenothermaceae 17 1 1
family Hyellaceae 1
family Hymenobacteraceae 181 622 2 4 1 4
family Hyphomicrobiaceae 101 409 1 5 4
family Hyphomonadaceae 495 57 1 4 3 2
family Iamiaceae 20
family Ichthyobacteriaceae 1
family Idiomarinaceae 24 38 1 1
family Ignavibacteriaceae 34 30 1 1
family Ilumatobacteraceae 70
family Immundisolibacteraceae 3
family Intrasporangiaceae 64 37 4
family Isosphaeraceae 5 5 1 4
family Jatrophihabitantaceae 6 1
family Jiangellaceae 5 11 1 4
family Jonesiaceae 94 16
family Kaistiaceae 33 10 1
family Kallotenuaceae 13
family Kangiellaceae 29 1
family Kiloniellaceae 402 206 5 1
family Kineosporiaceae 39 11 1 1
family Kofleriaceae 25 62 3
family Kordiimonadaceae 104
family Kosmotogaceae 1 10 1
family Kribbellaceae 257 49 5
family Ktedonobacteraceae 1
family Kytococcaceae 1 2 1
family Labilitrichaceae 36
family Lachnospiraceae 960 907 791 36 33 18 16 14 10 7 4
family Lacipirellulaceae 7
family Lactobacillaceae 960 893 813 36 28 18 11 11 10 7 4
family Lawsonellaceae 1
family Legionellaceae 69 578 1 4 3 4
family Lentisphaeraceae 4
family Leptolyngbyaceae 2 211 1 2 4
family Leptospiraceae 45 258 3 2 4
family Leptotrichiaceae 175 111 38 1 1 1 4
family Leuconostocaceae 874 704 103 9 3 2 1 4 8 6 4
family Lewinellaceae 8 45
family Limnochordaceae 1 1
family Listeriaceae 207 590 1 1 4 2 1 4
family Litoricolaceae 29 49 3
family Luteibaculaceae Bowman 2020 1
family Magnetococcaceae 18 1
family Maricaulaceae 30 8 1
family Marinifilaceae 242 4 4
family Marinilabiliaceae 499 1 7 5 1
family Marinobacteraceae Liao et al. 2020 147 45 1 4
family Mariprofundaceae 28 1 1
family Marivirgaceae 2 2 1
family Melioribacteraceae 644 16 2 6 4
family Merismopediaceae 3
family Mesoaciditogaceae 4
family Methanobacteriaceae 203 261 220 3 3 11 3 5 1
family Methanocorpusculaceae 1 3 1
family Methanomassiliicoccaceae 28 31
family Methanoregulaceae 2
family Methanosarcinaceae 3 4
family Methanotrichaceae 1
family Methylacidiphilaceae 8 1 1
family Methylobacteriaceae 52 46 5 4
family Methylococcaceae 178 3 1 2 4
family Methylocystaceae 19 11 4
family Methylophilaceae 257 395 1 2 1
family Methylothermaceae 47
family Microbacteriaceae 539 311 49 3 1 3 5 4
family Microbulbiferaceae 1 3 4
family Micrococcaceae 506 362 151 25 22 1 3 4 6 4
family Microcoleaceae 269 194 1 4
family Microcystaceae 3 2 1
family Micromonosporaceae 201 266 1 1 2 6 4
family Micropepsaceae 11
family Microscillaceae 114 1
family Microviridae 7
family Mooreiaceae 8
family Moraxellaceae 459 461 21 7 2 5 3 6 6 4
family Morganellaceae 450 132 17 17 1 10 1 9 7 4
family Moritellaceae 1 1
family Motilibacteraceae 5
family Muribaculaceae 1 4
family Mycobacteriaceae 76 159 59 2 2 1 4
family Mycoplasmataceae 665 759 11 6 1 6 5 4
family Mycoplasmoidaceae 9
family Myxococcaceae 4 4
family Mzabimycetaceae 126
family Nakamurellaceae 2 1 4
family Nannocystaceae 25 54 1
family Natranaerobiaceae 29 1
family Nautiliaceae 18 3 2 1
family Neisseriaceae 173 286 68 10 5 3 1 1 4 7 4
family Neomegalonemataceae 20 1
family Nitratiruptoraceae Waite et al. 2017 1 1
family Nitriliruptoraceae 6 5 2
family Nitrosomonadaceae 309 7 8 4 2 2 4
family Nitrosopumilaceae 2
family Nitrososphaeraceae 1 3
family Nitrospinaceae 5 3
family Nitrospiraceae 46 159 1 5 4
family Nocardiaceae 11 84 21 2 1 4
family Nocardioidaceae 366 122 1 1 6 4
family Nocardiopsaceae 275 2 1 4
family Nostocaceae 3 760 2 1 7 4
family Oceanospirillaceae 248 215 1 4
family Odoribacteraceae 886 853 619 33 25 16 8 12 9 7 4
family Oleiphilaceae 3
family Oligosphaeraceae 37
family Opitutaceae 37 5 3 1 4
family Orbaceae 4 4
family Ornithinimicrobiaceae 18 22 4
family Oscillatoriaceae 101 416 4
family Oscillospiraceae 960 905 788 36 33 18 16 14 10 7 4
family Oxalobacteraceae 432 585 259 25 2 8 1 6 7 4
family Paenibacillaceae 802 711 1 29 6 3 6 7 4
family Paludibacteraceae 127 3 1 3 2 1 1 4
family Parachlamydiaceae 2 2 1
family Parvibaculaceae 2 4
family Parvoviridae 2
family Parvularculaceae 23 1
family Pasteurellaceae 778 741 548 29 15 17 5 4 6 7 4
family Pasteuriaceae 35
family Patulibacteraceae 3 1
family Pectobacteriaceae 394 41 2 1 1 3 4
family Pelagibacteraceae 4 1
family Peptococcaceae 883 895 521 24 3 9 5 9 7 4
family Peptoniphilaceae 894 878 505 7 8 8 3 10 7 4
family Peptostreptococcaceae 956 807 789 30 32 15 5 5 10 7 4
family Perlucidibacaceae Liao et al. 2020 3
family Persicobacteraceae 69 1 1 4
family Petrotogaceae 6 15 6 4
family Phreatobacteraceae 1 1
family Phycisphaeraceae 2 1
family Phyllobacteriaceae 33 11 35 1 4
family Pirellulaceae Dedysh et al. 2020 36 3 1
family Piscirickettsiaceae 260 133 2 1 2 4
family Planctomycetaceae 90 6 1
family Planococcaceae 774 430 39 22 6 1 10 7 4
family Pleioneaceae 2
family Pleomorphomonadaceae 6 2 1
family Polyangiaceae 3 39 1 4
family Porphyromonadaceae 953 905 524 35 19 10 5 10 7 4
family Porticoccaceae 1
family Prevotellaceae 959 893 568 21 12 17 11 10 7 4
family Prochloraceae 2 2 4
family Prochlorococcaceae 1
family Prochlorotrichaceae 3 3
family Prolixibacteraceae 126 4 1
family Promicromonosporaceae 47 3 1 1 4
family Propionibacteriaceae 378 39 118 13 9 4 4 4
family Proteidae 5 1
family Proteinivoraceae 415 701 3 7 7
family Pseudanabaenaceae 2 273 2 4
family Pseudoalteromonadaceae 36 22 1 4
family Pseudococcidae 2 20 1
family Pseudomonadaceae 341 204 51 9 2 11 1 2 5 4
family Pseudonocardiaceae 285 246 2 4 4
family Pseudoxanthobacteraceae 5
family Psychromonadaceae 23 11 4
family Puniceicoccaceae 336 553 7 1 3 4 1
family Pyrinomonadaceae 33
family Rarobacteraceae 55
family Reichenbachiellaceae 39
family Reyranellaceae 5
family Rhabdochlamydiaceae 66
family Rhizobiaceae 76 223 8 14 1 1 7 4
family Rhodanobacteraceae 178 617 2 3 4
family Rhodobacteraceae 249 166 4 4 1 1 4 7 4
family Rhodobiaceae 7 1 3 4
family Rhodocyclaceae 327 556 70 1 1 1
family Rhodospirillaceae 727 743 370 25 8 9 7 4
family Rhodothalassiaceae 12 6 1
family Rhodothermaceae 113 835 6 1 6 1 4
family Rhodovibrionaceae 375 184 1 7
family Rickettsiaceae 200 484 2 6 4
family Rikenellaceae 946 18 733 35 32 18 14 13 9 7 4
family Rivulariaceae 98 406 6 4
family Robiginitomaculaceae 38 2
family Roseiarcaceae 4
family Roseiflexaceae 9 1 1
family Roseivirgaceae 36
family Roseobacteraceae Pujalte et al. 2014 50 38 1 2 4
family Rubricoccaceae 6
family Rubritaleaceae 143 295 3 1
family Rubrobacteraceae 60 5 2 2 3
family Ruminococcaceae 960 907 788 36 26 18 5 14 10 7 4
family Saccharomycetaceae 5
family Saccharospirillaceae 370 17 1 1
family Salinibacteraceae 2
family Salinisphaeraceae 15 1
family Salinivirgaceae 1
family Salisaetaceae 104 201 1 3
family Sandaracinaceae 6 1
family Sanguibacteraceae 2 3 1 1
family Saprospiraceae 43 45 1
family Schleiferiaceae 18 1
family Scytonemataceae 2 4
family Sedimentisphaeraceae 3
family Segniliparaceae 31 2 1
family Selenomonadaceae 547 892 99 12 5 5 10 7 4
family Shewanellaceae 122 542 1 1 5 4
family Simkaniaceae 6 1
family Sinobacteraceae 130 643 2 1 1
family Sneathiellaceae 5
family Solanaceae 11
family Solibacteraceae 1 1 1
family Solirubrobacteraceae 20 9
family Sphaerobacteraceae 25 1
family Sphaerochaetaceae 3 3 1
family Sphingobacteriaceae 557 907 4 24 4 4 8 7 4
family Sphingomonadaceae 527 291 17 14 1 1 5 6 4
family Sphingosinicellaceae 8 1 4
family Spirillaceae 3 14
family Spirochaetaceae 102 213 3 1 4
family Spiroplasmataceae 328 4 5 4
family Spirosomaceae 544 728 2 2 4 6 4
family Spirulinaceae 9
family Spongiibacteraceae 173 1
family Sporichthyaceae 8 4
family Sporolactobacillaceae 123 277 1 1 1
family Sporomusaceae 648 615 34 2 4 7 4
family Staphylinidae 3
family Staphylococcaceae 275 717 207 3 3 5 2 2 5 5 4
family Stappiaceae 2 4
family Stellaceae 175 1
family Steroidobacteraceae 29 9
family Sterolibacteriaceae 62 149 11 4
family Streptococcaceae 957 900 774 36 32 16 11 10 10 7 4
family Streptomycetaceae 185 180 2 2 6 4
family Streptosporangiaceae 141 343 2 1
family Succinivibrionaceae 227 227 15 2 3
family Sulfolobaceae 3
family Sulfuricellaceae Watanabe et al. 2014 6 1
family Sulfurovaceae Waite et al. 2017 5 1
family Sutterellaceae 952 896 713 36 29 18 11 11 10 7 3
family Symbiobacteriaceae 247 538 2 6 3
family Synechococcaceae 7 275 1 4
family Synergistaceae 359 679 236 1 1 1 1 6 7 4
family Syntrophaceae 51 150 1 1 4
family Syntrophobacteraceae 373 293 2 2 1
family Syntrophomonadaceae 404 743 11 2 3 5 4
family Syntrophorhabdaceae 35 1
family Syntrophotaleaceae 2
family Tannerellaceae 929 901 719 34 33 18 13 12 10 7 4
family Temperatibacteraceae 1
family Tepidamorphaceae 2
family Tepidanaerobacteraceae 10 290 2 1
family Terasakiellaceae 1
family Terrimicrobiaceae 4
family Thalassobaculaceae 2 44 1
family Thalassospiraceae 20 206 358 1
family Thermaceae 85 358 1 2 5 4
family Thermoactinomycetaceae 450 542 1 3 3 6 4
family Thermoanaerobacteraceae 277 782 212 3 5 4 4
family Thermoanaerobacterales Family III. Incertae Sedis 142 873 1 3 8 7 4
family Thermoanaerobacterales Family IV. Incertae Sedis 21 1
family Thermoanaerobaculaceae 77
family Thermococcaceae 1 2
family Thermodesulfobacteriaceae 22 98 2 1
family Thermodesulfobiaceae 46 11 17 5 2 2 1
family Thermodesulfovibrionaceae 14 157 6 3
family Thermoflexaceae 4
family Thermoflexibacteraceae 94
family Thermogemmatisporaceae 7 68 3
family Thermoguttaceae Dedysh et al. 2020 33 1
family Thermohalobacteraceae Spring 2020 719 4 3 7
family Thermoleophilaceae 31 1
family Thermolithobacteraceae 39
family Thermomicrobiaceae 1
family Thermomonosporaceae 58 224 1 3 4
family Thermonemataceae 16 3
family Thermoproteaceae 1
family Thermosediminibacteraceae 41 64 6 1
family Thermosporotrichaceae 3
family Thermosynechococcaceae 1
family Thermotogaceae 1 39 6 4
family Thermotomaculaceae 14 1
family Thioalkalibacteraceae 1 10
family Thioalkalispiraceae 49 1 3
family Thiobacillaceae 55 132 6 1 1
family Thiofilaceae 2
family Thiolinaceae 2
family Thioprofundaceae 6
family Thiotrichaceae 68 600 1 3 1 3 1
family Thiovulaceae Waite et al. 2017 12 3
family Thorselliaceae 44
family Tissierellaceae 430 57 1 2 1 3 4 3 4
family Treponemataceae 51 211 3 1 4
family Trichocoleusaceae 2
family Trichocomaceae 1
family Tropherymataceae 51 1
family Trueperaceae 12
family Tsukamurellaceae 3 53 1 4
family Turicibacteraceae Verbarg et al. 2014 579 617 474 8 13 11 5 1 7 5 4
family unclassified Actinobacteria (class) (miscellaneous) 1
family unclassified Bacillales 19 40
family unclassified Burkholderiales 199 201 19 15 3 3 4
family unclassified Clostridiales 721 783 35 30 1 4 3 8 4
family unclassified Rickettsiales 4
family Unionidae 122
family Vallitaleaceae Quemeneur et al. 56 3 3 8
family Veillonellaceae 953 906 744 32 29 16 10 6 10 7 4
family Verrucomicrobia subdivision 3 9 7 2
family Verrucomicrobiaceae 154 791 220 1 2 2 3 1
family Vibrionaceae 82 67 6 4 4
family Vicinamibacteraceae 1
family Victivallaceae 243 283 6 2 5 2 5
family Viviparidae 73 1
family Waddliaceae 1 5
family Weeksellaceae 90 23 8 1 1 4
family Wenzhouxiangellaceae 33 1
family Woeseiaceae 1
family Xanthobacteraceae 14 21 6 1
family Xanthomonadaceae 253 731 19 7 3 4 6 4
family Xenococcaceae 1
family Yersiniaceae 170 668 20 6 13 3 9 4
family Zoogloeaceae 137 225 1 1 2 1 3 4
family Zymomonadaceae 1 1 1
forma specialis Buchnera aphidicola (Acyrthosiphon kondoi) 1
forma specialis Buchnera aphidicola (Acyrthosiphon pisum) 2
forma specialis Buchnera aphidicola (Aphis glycines) 1
forma specialis Buchnera aphidicola (Cinara cedri) 1
forma specialis Buchnera aphidicola (Cinara confinis) 1
forma specialis Buchnera aphidicola (Cinara pseudotaxifoliae) 1
forma specialis Buchnera aphidicola (Cinara tujafilina) 1
forma specialis Buchnera aphidicola (Diuraphis noxia) 1
forma specialis Buchnera aphidicola (Myzus persicae) 4
forma specialis Buchnera aphidicola (Schizaphis graminum) 1
forma specialis Buchnera aphidicola (Schlechtendalia chinensis) 1
forma specialis Buchnera aphidicola (Tuberolachnus salignus) 1
forma specialis Buchnera aphidicola (Uroleucon ambrosiae) 1
forma specialis cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 1
forma specialis endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 1
forma specialis primary endosymbiont of Heteropsylla cubana 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans 4
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 3
genus 'Kouleothrix' 1
genus 'Terrahaemophilus' 1
genus Abiotrophia 108 48 9 2 2 2
genus Absiella 362 401 13 1 6 1
genus Abyssivirga 1
genus Acanthopleuribacter 50
genus Acaryochloris 3
genus Accumulibacter 3
genus Acetanaerobacterium 445 123 1 3 8
genus Acetatifactor 861 2 3 4
genus Acetilactobacillus 3
genus Acetitomaculum 652 138 1 3 3
genus Acetivibrio 883 891 32 26 1 4 8 7 4
genus Acetoanaerobium 515 3 6 1
genus Acetobacter 15 3 1 3
genus Acetobacterium 394 888 2 3 6 7 4
genus Acetobacteroides 236
genus Acetohalobium 2 34 1
genus Acetomicrobium 32 9 1
genus Acetonema 218 2 2
genus Acholeplasma 615 628 6 1 1 5 3 4
genus Achromatium 10
genus Achromobacter 71 1 9 1 2 4
genus Acidaminobacter 241 217 3 5 3
genus Acidaminococcus 490 646 96 4 1 5 2 3 3 4
genus Acidianus 1
genus Acidibacter 48
genus Acidibrevibacterium 1
genus Acidicaldus 1
genus Acidicapsa 58 1
genus Acidiferrobacter 10 3
genus Acidihalobacter 1
genus Acidimicrobium 102 1 1
genus Acidiphilium 16 25 1 1
genus Acidipropionibacterium 12 1 4
genus Acidisoma 1
genus Acidisphaera 1
genus Aciditerrimonas 121 2
genus Acidithiobacillus 34 1
genus Acidobacterium 1 3
genus Acidocella 1 1
genus Acidothermus 42 1
genus Acidovorax 33 48 1 1 4 4
genus Acinetobacter 252 192 16 6 2 5 3 1 4 4
genus Acrocarpospora 4
genus Actibacter 1
genus Actimicrobium 2
genus Actinoallomurus 2
genus Actinoalloteichus 4
genus Actinobacillus 243 518 90 7 3 1 5 4
genus Actinobaculum 7 65 18 6 2 1
genus Actinocatenispora 75 233 1
genus Actinocorallia 4 3 2
genus Actinokineospora 4 3
genus Actinomadura 32 29 2 1
genus Actinomyces 752 663 580 10 28 5 3 9 7 4
genus Actinomycetospora 2 5
genus Actinoplanes 79 8 4
genus Actinopolymorpha 1 57 1
genus Actinopolyspora 147 187 4 1
genus Actinosynnema 1
genus Actinotignum 55 13 29 3
genus Acutalibacter 8
genus Adhaeribacter 32
genus Adlercreutzia 660 537 5 24 6 7 1 1 6 1
genus Advenella 5 3
genus Aequorivita 9 1 2 1
genus Aeribacillus 24 1 1
genus Aeriscardovia 141
genus Aerococcus 251 22 16 2 4
genus Aeromicrobium 3 9 1 3 1
genus Aeromonas 122 7 4 1 4
genus Aerosphaera 48
genus Aerosticca Watanabe et al. 2020 3
genus Aestuariibacter 2
genus Aestuariispira 403 2
genus Afipia 1 3
genus Agaribacter 258
genus Agarilytica 1
genus Agarivorans 21 1
genus Agathobacter 1 1
genus Agathobaculum 906 1 8 28 3 9
genus Aggregatibacter 169 250 172 2 3 1 1 4 5 1
genus Aggregicoccus 1
genus Agreia 2
genus Agrilactobacillus 118 3
genus Agrobacterium 34 4
genus Agrococcus 2 17 3 1 1
genus Agromyces 76 158 1 2 1 1
genus Ahniella 1
genus Ahrensia 1
genus Akkermansia 929 843 811 36 27 18 16 14 9 4 4
genus Albibacterium 1
genus Albidovulum 1 1
genus Albimonas 2
genus Alcaligenes 13 2 3
genus Alcanivorax 10 98 1
genus Algibacter 3 2 1
genus Algicola 34
genus Algimonas 11 2
genus Algiphilus 40
genus Algivirga 1
genus Algorimarina 1
genus Algoriphagus 92 3
genus Aliarcobacter 3 35 1 1 4
genus Alicycliphilus 1 6 3 1
genus Alicyclobacillus 100 2 3 2 3 3
genus Aliicoccus 1
genus Aliidiomarina 15
genus Aliifodinibius 175
genus Aliihoeflea 1
genus Aliivibrio 1
genus Alishewanella 50 150 2
genus Alistipes 946 733 33 32 11 12 13 9 7 4
genus Alkalibacillus 4 55
genus Alkalibacter 76 2 3
genus Alkalibacterium 5 302 1 1 7
genus Alkalibaculum 196 1 2
genus Alkalicoccus 28
genus Alkaliflexus 40 3
genus Alkalihalobacillus 19 12 8 3
genus Alkalilimnicola 1
genus Alkalimarinus 12
genus Alkaliphilus 249 890 4 2 5 7 4
genus Alkalispirillum 1
genus Alkalispirochaeta 1
genus Alkalitalea 1
genus Alkanibacter 1
genus Alkanindiges 3 1
genus Allisonella 173 68 3 2
genus Alloactinosynnema 4
genus Allobacillus 2
genus Allobaculum 139 85 8 2 2
genus Allocatelliglobosispora 1
genus Allochromatium 46 1
genus Allofrancisella 6 1
genus Allofustis 13 2 2
genus Allohahella 69 89 2
genus Alloiococcus 68 3 1
genus Allokutzneria 1 1
genus Alloprevotella 383 7 83 2 2 1
genus Alloscardovia 142 56 19 2
genus Allosphingosinicella 13
genus Alsobacter 2
genus Alteracholeplasma 38 21 1 1 1
genus Altererythrobacter 9 2 4
genus Alteribacillus 2
genus Alteribacter 13
genus Alterileibacterium 2 5
genus Alterococcus 19 1
genus Alteromonas 20 4
genus Altibacter 1
genus Alysiella 4
genus Amaricoccus 3 30 2
genus Amedibacillus 299 585 12 1 1 6 2
genus Aminicella 490 1
genus Aminiphilus 4 82 5
genus Aminipila 1 4
genus Aminivibrio 59
genus Aminobacter 1 5 1
genus Aminobacterium 11 41 3 1
genus Aminomonas 45 4
genus Ammonifex 7 298
genus Ammoniphilus 25 39
genus Amoebophilus 2 796 1 5 1
genus Amphibacillus 22 4
genus Amphritea 3 21
genus Amycolatopsis 4 11 1 4
genus Amylibacter 3
genus Amylolactobacillus 2
genus Anabaena 1 3
genus Anabaenopsis 1
genus Anaerobacillus 1 210 20
genus Anaerobacter 59
genus Anaerobacterium 22 47 3 1 3
genus Anaerobiospirillum 15 1 2
genus Anaerobium 257 19 1 8
genus Anaerobranca 398 703 1 5 7
genus Anaerobutyricum 893 1 32 28 3 11 8 4
genus Anaerocella 157
genus Anaerococcus 536 395 373 5 1 5 7 4
genus Anaerocolumna 752 8 3 4
genus Anaerofilum 476 893 249 8 2 2 10 7
genus Anaerofustis 564 164 203 9 1 6
genus Anaeroglobus 492 14 5
genus Anaerolinea 44 56 4 2 1
genus Anaeromassilibacillus 9 6 1
genus Anaeromusa 9 94 2
genus Anaeromyxobacter 548 1 1
genus Anaerophaga 9
genus Anaeroplasma 157 84 48 1 1 2
genus Anaerorhabdus 18
genus Anaerosacchariphilus 1 13
genus Anaerosalibacter 195
genus Anaerosinus 14 34 2
genus Anaerosphaera 108 2
genus Anaerospora 156 3
genus Anaerosporobacter 508 550 5 1
genus Anaerostipes 957 800 780 36 33 12 13 12 10 7 4
genus Anaerotaenia 3 1
genus Anaerotignum 883 21 5 3 3 9 4
genus Anaerotruncus 777 872 730 29 19 7 5 10 7
genus Anaerovibrio 7 803 9 1 3 7 1
genus Anaerovorax 29 276 13 1 2
genus Anaplasma 7 1
genus Ancylobacter 6
genus Anderseniella 1 4
genus Andreesenia 7
genus Andreprevotia 1
genus Aneurinibacillus 40 2 1
genus Angelakisella 21 4
genus Annandia 2
genus Annwoodia 1
genus Anoxybacillus 36 53 3 1 1 1 1
genus Anoxybacter 1 4
genus Anoxynatronum 582 3
genus Antarctobacter 1
genus Apibacter 1
genus Apilactobacillus 6 3
genus Aquabacterium 42 5 5 1 1
genus Aquamicrobium 11
genus Aquaspirillum 28
genus Aquibacter 7 1
genus Aquicella 9
genus Aquiflexum 11 1
genus Aquihabitans 15
genus Aquiluna 1
genus Aquimarina 19 4 4
genus Aquimonas 18 6
genus Aquincola 9
genus Aquipuribacter 4
genus Aquirhabdus 1
genus Aquisalibacillus 1
genus Aquisalimonas 51
genus Aquisphaera 2
genus Aquitalea 2 11 4
genus Arabia 1 1
genus Arachidicoccus 3
genus Arachnia 1 1 2
genus Arcanobacterium 26 30 31 1 2
genus Archaeoglobus 1
genus Archangium 10 1
genus Arcicella 86 2
genus Arcobacter 20 55 1 1 4
genus Arcobacter group 18 48 1 1 4
genus Arcticibacterium 1
genus Ardenticatena 11 2
genus Arenibacter 1 3 3
genus Arenimonas 33 5
genus Arhodomonas 10
genus Aridibacter 18
genus Armatimonas 1
genus Aromatoleum 1
genus Arsenicicoccus 1
genus Arsenophonus 28 20 1
genus Arthrobacter 4 125 10 1 2 1 4
genus Arthromitus 4
genus Arthronema 4
genus Arthrospira 4 10 1 1
genus Asaccharobacter 11 1 7
genus Asaccharospora 99 1
genus Asaia 4 1
genus Asinibacterium 10
genus Aspergillus 1
genus Asteroleplasma 237 73 1 3
genus Asticcacaulis 37 349 1 1
genus Atelocyanobacterium 1
genus Atlantibacter 1
genus Atopobacter 4
genus Atopobium 310 304 98 3 2 4 3 1
genus Atopococcus 13
genus Atopomonas 5
genus Atopostipes 52 2
genus Aurantiacibacter 9 1
genus Aurantimicrobium 1
genus Aurantimonas 8
genus Auraticoccus 3 3
genus Aureibacter 4
genus Aureicoccus 1
genus Aureimonas 4 1
genus Aureispira 1
genus Aureitalea 3
genus Auricoccus 1
genus Auritidibacter 1
genus Austwickia 1
genus Avibacterium 61 92 1 4 1
genus Azoarcus 4 64 1 1
genus Azohydromonas 2 8
genus Azomonas 2
genus Azonexus 19 1
genus Azorhizobium 2 4
genus Azorhizophilus 2
genus Azospira 3 9 1
genus Azospirillum 290 163 2 3 6 2 4
genus Azotobacter 1
genus Babela 2
genus Bacillus 6 7 1 1
genus Bacillus 406 583 66 27 1 8 1 7 6 4
genus Bacteria 1
genus Bacterioplanes 1 1
genus Bacteriovorax 28 6 1
genus Bacteroides 960 907 784 35 33 18 15 14 10 7 4
genus Baia 73
genus Balneatrix 11
genus Balneola 163 50
genus Bariatricus 1 3
genus Barnesiella 778 412 4 14 2 5 5 8 4
genus Barrientosiimonas 23
genus Bartonella 11 31 4
genus Basfia 3 1
genus Basilea 3 1
genus Bdellovibrio 9 12 1 1 1
genus Beduini 1 1
genus Beggiatoa 1 1
genus Beijerinckia 1 1
genus Belliella 17 3
genus Bellilinea 3
genus Belnapia 2 1
genus Bergeyella 14 5
genus Bernardetia 79 1
genus Berryella Wylensek et al. 2020 3 1
genus Beutenbergia 1
genus Bibersteinia 2 1
genus Bifidobacterium 960 903 813 36 33 18 14 11 10 6 4
genus Bigelowiella 2 2
genus Bilophila 3 822 605 32 20 14 11 11 10 7
genus Biomaibacter 1
genus Biostraticola 26
genus Bisgaardia 57
genus Bittarella 8 5 1
genus Bizionia 2
genus Blastocatella 1
genus Blastochloris 5 1
genus Blastococcus 1 3 1 1
genus Blastocystis 2
genus Blastomonas 6 1
genus Blastopirellula 17
genus Blattabacterium 4
genus Blautia 960 907 789 36 32 18 14 14 10 7 4
genus Blochmannia 243 6 4
genus Bogoriella 8
genus Bombilactobacillus 85
genus Bombiscardovia 12 10
genus Bordetella 37 4
genus Borrelia 2 13 4
genus Borreliella 4
genus Bosea 7 1 4
genus Bosea 3
genus Boseongicola 2
genus Boudabousia 17
genus Bounagaea 1
genus Bowdeniella 18
genus Bowmanella 57
genus Brachybacterium 18 129 5 1
genus Brachymonas 3
genus Brachyspira 22 13 4
genus Brackiella 15
genus Bradymonas 1
genus Bradyrhizobium 2 22 11 1 4
genus Brassicibacter 640 4 3 4
genus Brenneria 364 29 3 1
genus Breoghania 1
genus Brevefilum 1
genus Brevibacillus 68 90 1 1 4
genus Brevibacterium 89 60 60 1 7 4
genus Brevifollis 9
genus Brevinema 5 1
genus Brevirhabdus 1
genus Brevundimonas 36 18 7 3 2 4
genus Breznakia 3
genus Breznakibacter 16 2
genus Brochothrix 8 528 1 1 1
genus Brockia 18
genus Brucella 1 11 4 1 2
genus Bruchidius 4
genus Bryobacter 18
genus Buchnera 4
genus Bulleidia 47 171 2 2 5
genus Burkholderia 31 256 1 11 1 5 4
genus Buttiauxella 117 1
genus Butyribacter 1 1
genus Butyricicoccus 542 78 34 30 1 3 11 7
genus Butyricimonas 788 717 455 29 11 15 4 6 8 7 4
genus Butyrivibrio 935 601 416 28 28 3 5 8 7 4
genus Bythopirellula 7
genus Caballeronia 16 4
genus Caedibacter 3
genus Caenispirillum 18
genus Caldalkalibacillus 119 2
genus Caldanaerobacter 106 35 1 1 1
genus Caldanaerobius 34 3
genus Caldanaerovirga 3
genus Caldibacillus 1 1 3
genus Caldicellulosiruptor 71 814 1 3 8 6 4
genus Caldicoprobacter 32 119
genus Caldilinea 8 289 7 3
genus Caldimicrobium 2 1
genus Caldimonas 15
genus Caldinitratiruptor 241 6
genus Caldisalinibacter 403 1
genus Caldisericum 1 1
genus Calditerricola 2
genus Calditerrivibrio 3 1
genus Caldithrix 4 181 7 1
genus Calochaete 11
genus Caloramator 620 887 1 9 2 4 8 7
genus Caloranaerobacter 1 6
genus Caloribacterium 12
genus Calothrix 98 370 6 4
genus Camelimonas 3
genus Caminibacter 1 1 2
genus Caminicella 582 16 2
genus Campylobacter 358 324 263 7 3 7 1 5 7 4
genus Candidatus Azobacteroides 59 4
genus Candidatus Methanoregula Brauer et al. 2006 1
genus Candidatus Nitrosoglobus 1
genus Candidatus Velamenicoccus Kizina et al. 2022 1
genus Candidatus Viadribacter Braun and Szewzyk 2016 4
genus Candidatus Walczuchella 1
genus Candidimonas 1
genus Canicola 52
genus Canis 1
genus Capnocytophaga 11 12 2 1 1 4
genus Caproiciproducens 1 29 8 4
genus Carboxydocella 23 501 3 3 2 1
genus Carboxydothermus 7 4
genus Carboxylicivirga 237 1 1
genus Cardinium 1
genus Cardiobacterium 104 17 2
genus Carnimonas 16
genus Carnobacterium 3 36 8 1 2 4
genus Carsonella 1
genus Casaltella 591 3 5
genus Castellaniella 1
genus Catabacter 128 97 1 1 8 6
genus Catellicoccus 1
genus Catenibacterium 312 286 292 12 8 2 2 2
genus Catenisphaera 73 1 2
genus Catenovulum 1 1
genus Catenulispora 3 4
genus Catonella 927 680 1 16 1 3 5 4
genus Caulobacter 15 7 1 4
genus Cecembia 13
genus Cedecea 91
genus Celeribacter 3
genus Celerinatantimonas 6
genus Cellulomonas 71 12 4 4
genus Cellulophaga 4 2 4
genus Cellulosibacter 67
genus Cellulosilyticum 880 15 2 9 4
genus Cellulosimicrobium 2 1 1
genus Cellvibrio 28 6 3
genus Centipeda 6
genus Cerasicoccus 180 231 1 2 1
genus Cereibacter 9 2
genus Cesiribacter 31
genus Cetobacterium 44 50 4 2 1
genus Chamaesiphon 5 3
genus Chania 10 3
genus Chelativorans 6 1
genus Chelatococcus 2 1
genus Chelonobacter 1 23 1
genus Chiayiivirga 1
genus Chishuiella 5
genus Chitinilyticum 3
genus Chitinimonas 20 1
genus Chitinispirillum 13 2
genus Chitinivibrio 2
genus Chitinivorax 3
genus Chitinophaga 27 28 3 4
genus Chlamydia 2 1 1
genus Chloracidobacterium 14 3
genus Chlorobaculum 3 732 1 2 4
genus Chlorobium 3 1
genus Chloroflexus 1 1
genus Chlorogloeopsis 9
genus Chloroherpeton 19 6
genus Chondrocystis 1
genus Chondromyces 1 39
genus Christensenella 207 179 16 26 2 1 9 7 4
genus Chromatium 2 199
genus Chromobacterium 9 86 1 4
genus Chromohalobacter 1 1
genus Chroococcidiopsis 1 1
genus Chroococcus 1 372 2
genus Chryseobacterium 40 70 2 1 6 4
genus Chryseolinea 28 4
genus Chryseomicrobium 18 2
genus Chthoniobacter 12 18
genus Chthonomonas 93 4 3
genus Citreitalea 1
genus Citricoccus 1 1
genus Citrifermentans 8 2
genus Citrobacter 15 162 55 17 7 4 1 9 3 4
genus Citromicrobium 3
genus Clavibacter 1 4
genus Cloacibacillus 119 73 106 1 1 1
genus Cloacibacterium 16 2 1 3
genus Cloacimonas 1
genus Clostridiisalibacter 6
genus Clostridioides 80 488 3 32 3 5 6 4
genus Clostridium 953 906 778 35 32 17 14 1 10 7 4
genus Cnuella 3
genus Cobetia 1
genus Cocleimonas 2
genus Coenonia 2
genus Cognaticolwellia Liu et al. 2020 1
genus Cohaesibacter 1 1
genus Cohnella 48 302 2 3 7 4
genus Coleofasciculus 1
genus Colidextribacter 1 23 8
genus Collimonas 27 5 4
genus Collinsella 824 738 770 32 21 14 8 6 7 4
genus Colwellia 28 4
genus Comamonas 35 73 22 8 1 3
genus Commensalibacter 2
genus Companilactobacillus 108 118 1 1 4
genus Conchiformibius 1 2
genus Conexibacter 8 6
genus Confluentimicrobium 1
genus Congregibacter 4
genus Contubernalis 114 5
genus Coprobacillus 455 883 154 5 25 3 5 2 7
genus Coprobacter 589 337 9 10 1 4
genus Coprococcus 959 905 2 31 32 17 14 2 10 7
genus Coprothermobacter 39 11 7
genus Coraliomargarita 66 267 1
genus Corallibacter 1
genus Corallococcus 4
genus Coriobacterium 15 80 2 3
genus Corticibacter 4
genus Corynebacterium 546 441 445 8 12 7 1 8 1 4
genus Couchioplanes 9 1
genus Coxiella 19 1
genus Craurococcus 2
genus Crenothrix 1
genus Criblamydia 43
genus Crinalium 1 1
genus Croceibacter 5 1
genus Croceibacterium 1
genus Croceicoccus 1
genus Cronobacter 76 83 1 1 4
genus Cruoricaptor 49 1
genus Cryobacterium 2 11 1
genus Cryomorpha 82
genus Cryptanaerobacter 1
genus Cryptobacterium 310 1 3 1
genus Cryptococcus 13
genus Cryptosporangium 1
genus Cucumibacter 2
genus Culturomica 7
genus Cuneatibacter 9
genus Cupidesulfovibrio 13 3
genus Cupriavidus 48 8 1 1 4
genus Curtobacterium 7 1 1
genus Curvibacter 7 30 6 2
genus Cutibacterium 10 5 29 1 1
genus Cyanobacterium 29 142 1
genus Cyanobium 4 1 1
genus Cyanothece 1
genus Cyclobacterium 52 4
genus Cycloclasticus 20 8 1
genus Cyclonatronum 3
genus Cylindrospermum 1
genus Cystobacter 33 27 1
genus Cytobacillus 63 1 4
genus Cytophaga 55 2 1
genus Dactylococcopsis 3
genus Dactylosporangium 1 12
genus Dasania 21
genus Dechloromonas 9 87
genus Deefgea 6 1
genus Deferribacter 35 110 4 4
genus Deferrisoma 24 1
genus Defluviicoccus 8
genus Defluviimonas 3 1
genus Defluviitalea 178 2 3 2
genus Defluviitoga 3 1
genus Dehalobacter 174 3 4
genus Dehalobacterium 1 360 9 7 1 3 1
genus Dehalococcoides 43 1 1 1 1
genus Dehalogenimonas 154 73 4
genus Deinococcus 134 428 6 1 1 4 4
genus Delftia 7 18 64 3
genus Dellaglioa 82 11
genus Demequina 46 5 1
genus Dendrosporobacter 41
genus Denitratisoma 11 117 1
genus Denitrobacter 2
genus Denitrobacterium 1 6 1
genus Denitrovibrio 3
genus Dependoparvovirus 2
genus Dermabacter 59 22 53 1
genus Dermacoccus 1 4 1 1
genus Derxia 38
genus Desemzia 189 2
genus Desertibacter 5
genus Deserticella 8
genus Desmospora 5
genus Desulfacinum 2 40
genus Desulfallas 29 2 1
genus Desulfarculus 122 1
genus Desulfatibacillum 3 1
genus Desulfatiferula 17
genus Desulfatiglans 11
genus Desulfatirhabdium 1
genus Desulfatitalea 8
genus Desulfitibacter 84 3 1 2 1
genus Desulfitispora 33 1
genus Desulfitobacterium 92 168 1 3 4
genus Desulfobacca 19 1 1
genus Desulfobacter 14 70 1 2 3
genus Desulfobacterium 295 1 1
genus Desulfobacula 3
genus Desulfobaculum 12
genus Desulfobotulus 6
genus Desulfobulbus 67 5 1
genus Desulfocapsa 2 1
genus Desulfocarbo 125
genus Desulfocella 274 1 2 5
genus Desulfococcus 3 2 4
genus Desulfoconvexum 1
genus Desulfocurvibacter 1
genus Desulfocurvus 2
genus Desulfofaba 38 3
genus Desulfofarcimen 224 23 1 4
genus Desulfofrigus 45 89
genus Desulfofundulus 81 138
genus Desulfofustis 9
genus Desulfoglaeba 237
genus Desulfohalobium 3 3
genus Desulfohalophilus 1
genus Desulfohalotomaculum 661 88 1 1
genus Desulfohalovibrio 76
genus Desulfomicrobium 212 58 6 4
genus Desulfomonile 13 149 1 1
genus Desulfonatronobacter 4
genus Desulfonatronovibrio 7 132 2
genus Desulfonatronum 43 210 2
genus Desulfonauticus 25 61 7
genus Desulfonema 23 2
genus Desulfonispora 87
genus Desulfopila 1
genus Desulfoplanes 18
genus Desulforegula 67 2
genus Desulforhabdus 1
genus Desulfosalsimonas 2
genus Desulfosarcina 20 50
genus Desulfoscipio Watanabe et al. 2020 7 1
genus Desulfosoma 126 2
genus Desulfosporosinus 186 407 1 1 3 7 4
genus Desulfotalea 1 2
genus Desulfothermus 11
genus Desulfotignum 1
genus Desulfotomaculum 760 479 2 9 3 1 7 7 4
genus Desulfovibrio 832 740 381 20 9 10 5 6 9 7 4
genus Desulfovirga 25
genus Desulfurella 6 5 1
genus Desulfuribacillus 7 1
genus Desulfurispira 3
genus Desulfurispirillum 168 1
genus Desulfurispora 519 464 2 1 2
genus Desulfurivibrio 2 1
genus Desulfurobacterium 4 1
genus Desulfuromonas 52 45 1 1
genus Desulfuromusa 3 421 1 5
genus Dethiobacter 8 38 1 2 2 1
genus Dethiosulfatibacter 258 2
genus Dethiosulfovibrio 91 503 1 1 6
genus Devosia 60 300 1 4
genus Devriesea 1
genus Dialister 847 587 475 10 11 14 5 4 8 5 4
genus Diaphorobacter 5 4 1
genus Dichelobacter 1 1
genus Dichotomicrobium 9
genus Dickeya 30 18 1 4
genus Dictyoglomus 60 2 1
genus Dielma 525 307 9 15 1 6
genus Dientamoeba 1
genus Dietzia 116 43 1 1
genus Dinoroseobacter 1
genus Diplorickettsia 13
genus Dispar 1
genus Dissulfuribacter 10
genus Dokdonella 30 349 1 1 1
genus Dokdonia 21 4
genus Dolichospermum 1 591 7 1
genus Dolosicoccus 7 1
genus Dolosigranulum 162 1
genus Dongia 157 2
genus Dorea 952 899 779 35 33 18 16 12 9 7
genus Draconibacterium 27 1
genus Drancourtella 3 9
genus Duganella 3 1
genus Duncaniella 4
genus Duodenibacillus 7 1 1
genus Dyadobacter 63 245 4 4
genus Dyella 7 1 1
genus Dysgonomonas 611 749 10 4 2 2 6 7
genus Dysosmobacter 9
genus Echinicola 48 4
genus Ectobacillus 24 2
genus Ectothiorhodosinus 5
genus Ectothiorhodospira 30 168 1
genus Edaphobacter 103 1
genus Edwardsiella 28 60
genus Edwardsiella 36 1
genus Effusibacillus 168 5
genus Eggerthella 777 665 575 24 32 8 4 4 9 6 4
genus Eggerthia 338 1 1
genus Egibacter 1
genus Egicoccus 1
genus Ehrlichia 8 227 2 1
genus Eikenella 6 2 5 2 1
genus Eionea 1
genus Eisenbergiella 716 518 24 3 3 6 9 6
genus Eisenibacter 113
genus Ekhidna 1
genus Elioraea 3
genus Elizabethkingia 21 4 4
genus Elstera 3
genus Elusimicrobium 54 7 7 1 1
genus Emcibacter 102
genus Emergencia 2 1 9
genus Empedobacter 8 1
genus Emticicia 139 642 2 2 5
genus Endobacter 1
genus Endobugula 49
genus Endolissoclinum 1
genus Endomicrobium 1
genus Endozoicomonas 3 1
genus Enhydrobacter 15
genus Enorma 87 68 3 2 1
genus Ensifer 3 1
genus Enterobacter 46 367 208 9 8 15 1 5 7 4
genus Enterocloster 862 2 33 29 3 3 9 4
genus Enterococcus 166 718 137 27 28 9 2 4 4 4 4
genus Enterorhabdus 267 263 7 11 7 1
genus Enteroscipio 2
genus Enterovibrio 1
genus Entomomonas 1
genus Entomoplasma 18 5 2 4
genus Epibacterium 1
genus Epilithonimonas 3 4 1
genus Epulopiscium 59 3 1
genus Ercella 246
genus Ereboglobus 3
genus Eremococcus 23 21 1
genus Eremococcus 1 11
genus Erwinia 166 235 1 1 11 1 1 2 4
genus Erysipelatoclostridium 956 756 35 29 3 8 9 7 4
genus Erysipelothrix 591 751 3 4 4 7 3
genus Erythrobacter 14 75 1 1
genus Erythromicrobium 9
genus Escherichia 59 732 1 11 26 1 6 5 1 6 4
genus Ethanoligenens 764 427 3 9 4
genus Eubacterium 960 866 151 36 33 13 11 11 9 7 4
genus Eudoraea 47
genus Euryhalocaulis 8
genus Euzebya 31 478 1 1 1
genus Euzebyella 1
genus Evansella 1
genus Evtepia 10 3
genus Exiguobacterium 27 18 3 4
genus Extensimonas 1
genus Extibacter 6
genus Ezakiella 239 2 2 1
genus Fabibacter 6
genus Facklamia 717 85 50 1 2 5
genus Faecalibacterium 959 907 772 35 33 18 13 4 1 7 4
genus Faecalibaculum 1
genus Faecalicatena 553 21 1
genus Faecalicoccus 580 3 1 3 5
genus Faecalimonas 1
genus Faecalitalea 112 80 18 17 4
genus Falcatimonas 1 14 1
genus Falsiporphyromonas 236 2
genus Falsirhodobacter 1
genus Fangia 12
genus Fannyhessea 137 2
genus Fastidiosipila 73 75 1 3
genus Fenollaria 480 4 2 5
genus Fermentimonas 4
genus Ferrimicrobium 2 9 1
genus Ferrimonas 36 7 1
genus Ferrithrix 142
genus Ferrovibrio 2
genus Ferrovum 2
genus Ferruginibacter 55
genus Fervidicella 7
genus Fervidobacterium 11 1 4
genus Fibrella 3
genus Fibrobacter 191 80 85 1 1
genus Fictibacillus 32 4
genus Filifactor 321 256 18 1 3
genus Filimonas 4
genus Filomicrobium 1
genus Fimbriimonas 23 2 1
genus Finegoldia 689 456 443 5 3 4 1 7 1 3
genus Fischerella 1
genus Flagellimonas 1 1
genus Flammeovirga 25 198 1 4
genus Flaviaesturariibacter 1
genus Flavicella 4
genus Flaviflexus 21 3
genus Flavihumibacter 3
genus Flavilitoribacter 7
genus Flavisolibacter 1 13 1 1 4
genus Flavitalea 9
genus Flavivirga 1
genus Flavobacterium 38 37 394 7 4
genus Flavonifractor 933 768 31 32 4 1 9 7 4
genus Flectobacillus 75
genus Flexibacter 8 1 2
genus Flexistipes 57 1
genus Flexithrix 11
genus Flintibacter 25 1 8
genus Fluoribacter 1
genus Fluviicola 17 3 1
genus Fluviimonas 364 1
genus Fluviispira 3
genus Fodinibius 3 2
genus Fodinicurvata 381 1 7
genus Fontibacter 30
genus Fonticella 110 2
genus Formosa 1 4
genus Fournierella 1 16 3 1
genus Francisella 54 36 2 1 1 4
genus Franconibacter 10
genus Frankia 1 4
genus Frateuria 3 1
genus Frederiksenia 2
genus Fretibacter 14
genus Fretibacterium 4 98
genus Friedmanniella 25 12 1 1
genus Frigoribacterium 1
genus Frischella 2 3
genus Frisingicoccus 7
genus Frondihabitans 1
genus Fructilactobacillus 68 46 1 1
genus Fructobacillus 30 50
genus Fuchsiella 9 1
genus Fucophilus 2
genus Fulvibacter 1
genus Fulvimarina 1
genus Fulvitalea 54
genus Fulvivirga 86 4
genus Furfurilactobacillus 32 369 1
genus Fuscovulum Suresh et al. 2019 1 3
genus Fusibacter 159 60 5 6
genus Fusicatenibacter 944 760 17 1 3 11
genus Fusobacterium 466 402 121 5 4 2 4 6 4
genus Gabonibacter 10 1 2
genus Gaetbulibacter 1
genus Gaiella 36 2
genus Galenea 37 2
genus Gallaecimonas 3
genus Gallibacterium 51 22 1 1 1
genus Gallicola 53 70 1
genus Gallionella 24 116 2 1
genus Garciella 12 2
genus Gardnerella 127 54 40 1 1 2 1
genus Garicola 2
genus Garritya 2
genus Gelria 2 211 2
genus Gemella 514 835 153 3 17 4 6 6 4
genus Geminicoccus 42 1
genus Geminisphaera 9
genus Geminocystis 1
genus Gemmata 12 7 1 1
genus Gemmatimonas 17 4 1
genus Gemmatirosa 3 1
genus Gemmiger 868 16 10 6 8
genus Gemmobacter 2 1 4
genus Geoalkalibacter 3 1
genus Geobacillus 46 289 7 11 1 1 3 1
genus Geobacter 44 55 1 4
genus Geodermatophilus 6 3 1 2
genus Geofilum 98
genus Geomicrobium 15
genus Geopsychrobacter 6
genus Georgenia 34 7
genus Georhizobium 1
genus Geosporobacter 1 4
genus Geothermobacter 2
genus Geothermomicrobium 2
genus Geothrix 338 422 2 2
genus Geovibrio 1 9 3
genus Gibbsiella 4
genus Giesbergeria 1 6
genus Gilliamella 1
genus Gillisia 23 539 1 1
genus Gilvimarinus 1
genus Gimesia 2
genus Glaciecola 60 131 3
genus Glaciimonas 2
genus Glaesserella 3 1
genus Gleimia 32 24 1
genus Globicatella 18 2 1
genus Gloeobacter 8 1
genus Gloeothece 1
genus Gloeotrichia 1
genus Glomeribacter 2 378 3
genus Gluconacetobacter 7 3 1
genus Gluconobacter 3 63 1
genus Glutamicibacter 51 85 1
genus Glycocaulis 1 1
genus Glycomyces 9 42 1
genus Gorbachella 1 1 1
genus Gordonia 59 27 1 4
genus Gordonibacter 518 458 24 24 1 7 1
genus Gottschalkia 143 3 3 4
genus Gracilibacillus 92 1
genus Gracilibacter 406 3 2 3 5
genus Gracilimonas 255 2 3
genus Gramella 2 45 6 4
genus Granulibacter 4
genus Granulicatella 136 411 319 12 3 2 5 5
genus Granulicella 12 53
genus Granulosicoccus 68 1
genus Gryllotalpicola 7 1
genus Gudongella 1
genus Guggenheimella 322 2 5
genus Gulbenkiania 4
genus Gullanella 2
genus Gulosibacter 4 31 29 1
genus Guyparkeria 1 10
genus Gynuella 36 1
genus Haematobacter 3
genus Haematospirillum 2
genus Haemophilus 718 682 528 21 15 17 4 4 4 6 4
genus Hafnia 14 2 1
genus Hahella 166 91 1 3
genus Halanaerobacter 3 7 4
genus Halanaerobaculum 6
genus Halanaerobium 11 165 1 2 4
genus Halarcobacter 9 2
genus Halarsenatibacter 68
genus Haliangium 22 62 3
genus Haliea 7
genus Halioglobus 1 1
genus Haliscomenobacter 53 3
genus Halobacillus 24 4
genus Halobacteriovorax 34 5 4
genus Halobacteroides 6 1
genus Halobaculum 1
genus Halocella 4 4
genus Halochromatium 170 51 2
genus Halodesulfovibrio 5
genus Haloferax 1
genus Haloferula 26 2
genus Haloglycomyces 1
genus Halolactibacillus 6
genus Halomicroarcula 1
genus Halomicronema 1 3
genus Halomonas 385 87 1 1 2 1 3 4
genus Halonatronum 5
genus Haloplasma 30 1 1
genus Halopolyspora 127 2
genus Halopseudomonas 7
genus Halorhodospira 79 21 1 2 1
genus Halospina 8
genus Halospirulina 1
genus Halotalea 1
genus Halothermothrix 132 2 4 1
genus Halothiobacillus 34 15 2
genus Haploplasma 20 41 2 2 3
genus Harryflintia 4
genus Hartmannibacter 1
genus Hathewaya 467 889 3 2 7
genus Hazenella 15
genus Helcococcus 144 65 20
genus Helicobacter 28 261 3 1 1 4
genus Heliimonas 6
genus Heliobacterium 3 1 3 3 1
genus Heliomicrobium 1 1
genus Heliomonas 1 1
genus Heliophilum 4 2
genus Heliorestis 9 307 3 5
genus Heliothrix 1
genus Hellea 8
genus Henriciella 383 4
genus Hepatoplasma 1
genus Hephaestia 2
genus Herbaspirillum 41 356 251 13 1 3 3 4
genus Herbinix 324 6 1 5 4
genus Herminiimonas 175 33 2 4
genus Herpetosiphon 3 1
genus Hespellia 923 499 15 1 9
genus Heyndrickxia 1 1
genus Hippea 2 1
genus Hirschia 1
genus Histophilus 19 1
genus Hoeflea 1
genus Holdemanella 534 492 2 17 2 5 6
genus Holdemania 805 767 565 23 26 9 3 10 7
genus Holophaga 10 2
genus Holospora 1
genus Holzapfelia 47
genus Hoppeia 1
genus Howardella 660 124 2 2 2
genus Hoyosella 26
genus Hugenholtzia 32 2
genus Humibacter 18
genus Hungateiclostridium 563 595 2 4 1 7 6 4
genus Hungatella 906 32 31 3 4 9 7
genus Hwangdonia 11
genus Hydrocarboniphaga 1 639 1
genus Hydrocoleum 9
genus Hydrogenibacillus 67 4 2 3
genus Hydrogenispora 456
genus Hydrogenoanaerobacterium 754 224 2
genus Hydrogenobacter 3 1 3
genus Hydrogenobaculum 1 7 2 3 1
genus Hydrogenophaga 12 14 1 1
genus Hydrogenophilus 202 387 3 1 1
genus Hydrogenothermus 13
genus Hydrogenovibrio 18 23 1
genus Hydrotalea 14
genus Hylemonella 1
genus Hymenobacter 38 546 1 4
genus Hyphomicrobium 16 93 4 4
genus Hyphomonas 10 49 3 2
genus Iamia 5
genus Ianmoorea 3
genus Ichthyobacterium 1
genus Ideonella 2
genus Idiomarina 8 38 1
genus Ignatzschineria 6 1
genus Ignavibacterium 34 30 1
genus Ignavigranum 77 2
genus Ihubacter 28 9
genus Ileibacterium 3
genus Ilumatobacter 70
genus Ilyobacter 4
genus Immundisolibacter 3
genus Imperialibacter 15
genus Imtechella 1 1
genus Indibacter 22
genus Indioceanicola 3
genus Inquilinus 9 6
genus Insolitispirillum 177 539 6
genus Intestinibacillus 8 7
genus Intestinibacter 779 770 19 24 3 8
genus Intestinibaculum Kim et al. 2019 4
genus Intestinimonas 905 721 34 28 4 1 9 4
genus Intrasporangium 2
genus Iodobacter 7 3
genus Ishikawaella 1
genus Isochromatium 5
genus Izimaplasma 1
genus Jahnia Reichenbach 2005 1
genus Janibacter 2 1
genus Jannaschia 1 2 1
genus Janthinobacterium 6 29 3 4
genus Jatrophihabitans 6 1
genus Jeotgalibaca 3
genus Jeotgalibacillus 6 1
genus Jeotgalicoccus 58 9 1 1
genus Jiangella 1 11 1 4
genus Jinshanibacter 3
genus Johnsonella 631 875 10 11 1 2 7
genus Jonesia 94 16
genus Jonquetella 92 10 1
genus Kaistella 1 3
genus Kaistia 33 10 1
genus Kallipyga 58 1 1
genus Kallotenue 13
genus Kandleria 155 2
genus Kangiella 27 1
genus Kastovskya 2
genus Keratinibaculum 8
genus Ketobacter 1
genus Ketogulonicigenium 3 1
genus Kiloniella 41 3 1
genus Kineococcus 5 3 1
genus Kineosporia 1 5
genus Kinetoplastibacterium 4
genus Kingella 4 5 2 1
genus Kistimonas 1
genus Kitasatospora 8 25 5 4
genus Klebsiella 68 256 144 7 15 12 4 11 9 5 4
genus Kluyvera 10 536 4 1 7
genus Knoellia 1
genus Kocuria 25 25 6 1 1 4
genus Kofleria 2
genus Komagataeibacter 27 3
genus Kordia 1 1
genus Kordiimonas 2
genus Koribacter 4 1
genus Kosakonia 251 25 3 3
genus Kosmotoga 1 10 1
genus Kozakia 1 3
genus Kribbella 280 49 5
genus Kroppenstedtia 3 1
genus Ktedonobacter 1
genus Kurthia 3
genus Kushneria 3 194 2 1
genus Kutzneria 1
genus Kyrpidia 95 1
genus Kytococcus 1 2 1
genus Labilibacter 4
genus Labilibaculum 4
genus Labilithrix 36
genus Labrenzia 1
genus Labrys 4 6
genus Laceyella 5 30 1
genus Lachnoanaerobaculum 935 12 3 1 6 4
genus Lachnobacterium 647 835 12 28 1 8 6 8 4
genus Lachnoclostridium 958 2 36 31 4 10 9 3 4
genus Lachnospira 954 907 713 35 33 18 6 9 10 7 4
genus Lachnotalea 3 3
genus Lacibacter 2 3
genus Lacibacterium 121
genus Lacihabitans 7
genus Lacimicrobium 1
genus Lacinutrix 1 4
genus Lacrimispora 284 1 32 18 1 1 4
genus Lacticaseibacillus 56 181 141 3 8 1 3 1 3 4
genus Lactiplantibacillus 8 114 65 13 3 1 4 2
genus Lactivibrio 2
genus Lactobacillus 960 854 813 36 27 18 11 11 10 7 4
genus Lactococcus 616 542 260 9 10 7 2 1 7 3 4
genus Lactonifactor 628 477 27 3 9 7
genus Lactovum 220
genus Lacunisphaera 3
genus Lagierella 1
genus Lamprocystis 2
genus Lancefieldella 70 57 4 2 2 1 1
genus Lapidilactobacillus 4
genus Laribacter 3 3
genus Larkinella 1
genus Larsenimonas 1
genus Lascolabacillus 1
genus Latilactobacillus 2 33 4 1 3
genus Lautropia 43 51 8 1 1
genus Lawsonella 1
genus Lawsonia 518 5 1 3
genus Lawsonibacter 9
genus Leadbetterella 13 3
genus Lebetimonas 11
genus Leclercia 1
genus Legionella 66 578 1 4 3 4
genus Leifsonia 1 1 1
genus Leisingera 1
genus Lelliottia 1 270 2 4
genus Leminorella 4 1
genus Lentibacillus 37 135 1
genus Lentilactobacillus 3 55 14 2 1 2
genus Lentisphaera 4
genus Lentzea 1 2 1
genus Leptofauchea 10
genus Leptolinea 93 2
genus Leptolyngbya 1 211 1 2 4
genus Leptonema 14 2
genus Leptospira 25 258 1 4
genus Leptospirillum 16 1
genus Leptothrix 7 132 2 1
genus Leptotrichia 60 39 29 1 4
genus Leucobacter 38 16 1
genus Leuconostoc 671 415 79 3 7 2 1 9 6 4
genus Leucothrix 5 11 1
genus Levilactobacillus 36 52 5 1 1
genus Levilinea 1
genus Levyella 335 2
genus Lewinella 8 45
genus Libanicoccus 1
genus Liberibacter 2 52 6 7 1
genus Lichenihabitans 1
genus Ligilactobacillus 126 112 65 6 2 1 4
genus Limibacillus 15
genus Limibacter 1
genus Limimaricola 2
genus Limimonas 3
genus Limisphaera 9 2
genus Limnobacter 32 655 1 2 1 1
genus Limnobaculum 1
genus Limnochorda 1 1
genus Limnohabitans 3 11 2
genus Limnoraphis 3
genus Limnospira 1
genus Limosa 1
genus Limosilactobacillus 271 112 75 2 6 1 2 1 4
genus Liquorilactobacillus 149
genus Lishizhenia 2
genus Listeria 203 182 1 1 4 1 4
genus Litoribacillus 56
genus Litoribacter 18
genus Litoribrevibacter 11
genus Litoricola 29 49 3
genus Litorilinea 8 2 2
genus Litorilituus 79 4
genus Loigolactobacillus 10 1
genus Loktanella 6 2
genus Longibaculum 3 3
genus Longicatena 4 3
genus Longilinea 3 4
genus Longimonas 51
genus Lonsdalea 5
genus Luminiphilus 48
genus Lunatimonas 2
genus Luteibacter 39 507 3 1
genus Luteibaculum 1
genus Luteimonas 18 16 1 1
genus Luteipulveratus 1
genus Luteitalea 1
genus Luteivirga 5
genus Luteococcus 9 1
genus Luteolibacter 25 382 2
genus Lutibacter 37 4
genus Lutibacterium 5
genus Lutibaculum 1
genus Lutispora 224 1 3 5
genus Lysinibacillus 17 122 5 5 2 1 4
genus Lysinimonas 1
genus Lysobacter 58 174 1 2 2 4
genus Macellibacteroides 4
genus Macrococcus 8 365 1 1 3 3
genus Mageeibacillus 6 1
genus Magnetococcus 18 1
genus Magnetospira 6 1
genus Magnetospirillum 7 3 1
genus Magnetovibrio 3
genus Mahella 21 1
genus Mailhella 2 1
genus Malaciobacter 22 4
genus Malacoplasma 74 1
genus Maledivibacter 30 1
genus Mammaliicoccus 24 2 1 1
genus Mangrovibacter 6
genus Mangroviflexus 1
genus Mannheimia 82 363 8 1 1 6 1
genus Maribacter 1 2 4
genus Maricaulis 16 5
genus Marichromatium 29 132 1
genus Maridesulfovibrio 11 32 1 3
genus Marinicauda 2
genus Marinicella 9
genus Marinifilum 242 4
genus Mariniflexile 4 4
genus Marinilabilia 50 1 1
genus Marinilactibacillus 4
genus Marinimicrobium 2 1
genus Marininema 2 2 3
genus Mariniphaga 15
genus Mariniradius 9
genus Marinitalea 2
genus Marinithermofilum 2
genus Marinithermus 2
genus Marinitoga 2 17 6 4
genus Marinobacter 134 45 1 4
genus Marinobacterium 20 4
genus Marinococcus 3 41 1
genus Marinomonas 46 15 1
genus Marinoscillum 26
genus Marinospirillum 50 177
genus Marinosulfonomonas 1
genus Marinovum 1
genus Mariprofundus 28 1
genus Marisediminitalea 2
genus Marispirillum 63
genus Maritalea 1
genus Maritimibacter 1
genus Marivirga 2 2 1
genus Marivita 1 2
genus Marivivens 1
genus Marixanthomonas 23
genus Marmoricola 25 1
genus Marseillibacter 1 34
genus Martelella 1 2 1
genus Marvinbryantia 855 607 3 14 3 1 9 6
genus Massilia 21 5 19 4
genus Massilicoli Ndongo et al. 2019 4