Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank Bacteria BiomeSight
1576 Samples
Thryve
1221 Samples
uBiome
815 Samples
CosmosId
38 Samples
SequentiaBiotech
36 Samples
custom
30 Samples
Microba
21 Samples
AmericanGut
18 Samples
BiomeSightRdp
15 Samples
es-xenogene
8 Samples
Medivere
7 Samples
biotype Haemophilus influenzae aegyptius 1
biotype Mycobacterium tuberculosis variant caprae 1
biotype Mycobacterium tuberculosis variant pinnipedii 153
clade 1
clade 4
clade 50 kb inversion clade 430 11 2 1 1 3
clade Amniota 1 4
clade ant endosymbionts 384 4 6
clade ant, tsetse, mealybug, aphid, etc. endosymbionts 396 1 4 6
clade aphid secondary symbionts 20 1
clade Archelosauria 2
clade Archosauria 2
clade asterids 18 4
clade Bacteria candidate phyla 199 5 1 3
clade Bacteroidetes/Chlorobi group 1571 1204 790 35 36 29 20 18 15 8 7
clade Bilateria 340 8 11 1 1 5 4 1
clade Boreoeutheria 1 3
clade Caldiserica/Cryosericota group 1 7 1
clade campanulids 4
clade Candidatus Baumannia 1
clade Candidatus Dependentiae 3
clade Candidatus Uzinura 1
clade Coelurosauria 2
clade core chlorophytes 1
clade core genistoids 431 11 2 1 1 3
clade Cyanobacteria/Melainabacteria group 1472 832 31 18 8 7 9 4 7
clade Deuterostomia 5 1 4 1
clade Dicondylia 196 7 11 1 5 4 1
clade Dinosauria 2
clade Dipnotetrapodomorpha 5 1 4 1
clade Ditrysia 2
clade dothideomyceta 1
clade Ecdysozoa 196 7 11 1 5 4 1
clade Embryophyta 433 11 18 2 4 1 3
clade eudicotyledons 433 11 18 2 4 1 3
clade Eumetazoa 367 8 11 1 1 5 4 1
clade Euphyllophyta 433 11 18 2 4 1 3
clade Euteleostomi 5 1 4 1
clade Eutheria 1 3
clade fabids 430 11 2 1 1 3
clade FCB group 1571 1204 790 35 36 29 21 18 15 8 7
clade genistoids sensu lato 430 11 2 1 1 3
clade Gnathostomata 5 1 4 1
clade Gunneridae 433 11 18 2 4 1 3
clade Heliantheae alliance 4
clade lamiids 18
clade leotiomyceta 1 1
clade lice endosymbionts 1
clade Lophotrochozoa 284 1 1 1
clade Luna-1 subcluster 3 1 3
clade Mandibulata 196 7 11 1 5 4 1
clade mealybug secondary endosymbionts 1
clade Mesangiospermae 433 11 18 2 4 1 3
clade Metamonada 1
clade Methanomada group 409 247 220 5 16 11 1 11 9 2 7
clade Nitrospinae/Tectomicrobia group 4 5
clade Obtectomera 2
clade OM182 clade 1
clade OMG group 1
clade Opisthokonta 367 8 11 1 4 13 5 4 6
clade Panarthropoda 196 7 11 1 5 4 1
clade Pancrustacea 196 7 11 1 5 4 1
clade Patescibacteria group 1
clade Pentapetalae 433 11 18 2 4 1 3
clade Protostomia 335 8 11 1 5 4 1
clade PVC group 1440 1081 567 18 29 23 9 14 12 8 5
clade Rhizaria 2 2
clade rosids 430 11 2 1 1 3
clade saccharomyceta 4 6
clade Sar 2 2 2
clade SAR116 cluster 1
clade Sauria 2
clade Saurischia 2
clade Sauropsida 2
clade sordariomyceta 1
clade Spermatophyta 433 11 18 2 4 1 3
clade Spiralia 284 1 1 1
clade Stenosarchaea group 14 8 10 1 3
clade Stramenopiles 2
clade sulfur-oxidizing symbionts 1 1
clade TACK group 21 5 1
clade Teleostomi 5 1 4 1
clade Terrabacteria group 1571 1204 792 35 36 29 21 18 15 8 7
clade Tetrapoda 5 1 4 1
clade Theria 1 3
clade Theropoda 2
clade Tracheophyta 433 11 18 2 4 1 3
clade Vertebrata 5 1 4 1
class 1
class 1
class Acidimicrobiia 192 428 2 3 1 3
class Acidithiobacillia 39 1 1
class Acidobacteriia 260 754 111 2 2 4 2
class Actinomycetia 1560 1206 785 35 35 26 18 17 15 8 7
class Agaricomycetes 1
class algae 2 2
class Alphaproteobacteria 1526 1184 437 4 32 8 14 7 15 7 7
class Amphibia 5 1
class Anaerolineae 655 270 9 1 5 4 7
class Anthozoa 36 1
class Aquificae 10 78 3 4 4
class Archaeoglobi 1
class Ardenticatenia 21 3 1
class Armatimonadia 1
class Aves 2
class Bacilli 1572 1253 786 34 36 26 20 18 15 8 7
class Bacteroidia 1572 1253 790 35 36 29 20 18 15 8 7
class Balneolia 63 638 7 2 3
class Betaproteobacteria 1565 1243 747 33 36 18 16 18 15 7 7
class Bivalvia 212 1
class Blastocatellia 142 1 1 3
class Caldilineae 508 372 2 5 3 7
class Caldisericia 1 7 1
class Calditrichia 287 10 1 7
class Candidatus Babeliae 3
class Candidatus Brocadiia 12 1
class Chitinispirillia 17 2
class Chitinivibrionia 2
class Chitinophagia 719 965 5 5 1 1 9 4 6
class Chlamydiia 144 133 1 1 1 1
class Chlorobia 1266 82 1 1 5 4 2
class Chloroflexia 2 62 2 14 1 1
class Chlorophyceae 1
class Chrysiogenetes 268 18 1 1 1
class Chthonomonadetes 5 123 3
class Clostridia 1572 1253 792 35 36 29 20 18 15 8 7
class Conoidasida 1
class Coprothermobacteria 13 60 7
class Coriobacteriia 1556 1247 786 35 36 13 14 18 15 8 7
class Cytophagia 1513 1063 7 12 4 12 4 6
class Deferribacteres 393 103 1 1 3 4 4
class Dehalococcoidia 94 226 1 1 1 2 4
class Deinococci 983 250 7 13 1 10 4 7
class Deltaproteobacteria 1552 1204 646 21 33 24 14 14 15 8 7
class Dictyoglomia 87 2 1
class Dothideomycetes 1
class Elusimicrobia 7 84 7 19 3 9 1 7
class Endomicrobia 1
class Epsilonproteobacteria 852 557 266 3 10 2 7 9 8 7
class Erysipelotrichia 1569 1252 785 34 36 14 13 17 15 7 7
class Eurotiomycetes 1 1
class Fibrobacteria 116 267 186 2 1
class Fimbriimonadia 2 44 1
class Flavobacteriia 1369 647 458 3 12 7 1 2 8 4 7
class Florideophyceae 10
class Fusobacteriia 796 692 144 4 7 9 2 2 6 8 6
class Gammaproteobacteria 1566 1251 720 33 36 19 18 18 15 8 7
class Gastropoda 101 1 1
class Gemmatimonadetes 8 49 1 15 1 8 1 7
class Gloeobacteria 9 1 1 1
class Halobacteria 4 1 1
class Holophagae 733 666 2 6
class Hydrogenophilalia 765 247 6 1 2 1
class Ignavibacteria 37 802 2 16 2 6 4
class Insecta 196 7 11 1 5 4 1
class Ktedonobacteria 147 18 1 1 3
class Lentisphaeria 306 283 4 6 3 1 5 6 1
class Limnochordia 1 1
class Magnoliopsida 433 11 18 2 4 1 3
class Malgrandaviricetes 4
class Mammalia 1 3
class Methanobacteria 409 251 220 5 16 11 1 11 9 2 7
class Methanococci 1
class Methanomicrobia 10 7 10 1 3
class Methylacidiphilae 12 1 1
class Mollicutes 1505 1102 167 1 25 5 2 14 4 6
class Negativicutes 1567 1253 792 35 34 20 18 17 15 8 7
class Nitriliruptoria 909 74 3 1 1
class Nitrososphaeria 14 1
class Nitrospinia 4 5
class Nitrospira 304 54 1 1 4 6
class Oligoflexia 25 104 1 1 1 1 4 1
class Oligosphaeria 45 1
class Opitutae 926 447 96 1 1 2 5 4 4
class Phycisphaerae 2 1 4
class Pisoniviricetes 1
class Planctomycetia 18 111 1 1 4
class Rhodothermia 122 53 1
class Rhynchonellata 1
class Rubrobacteria 10 115 3 2 3
class Saccharomycetes 4 6
class Saprospiria 74 181 4
class Solibacteres 31 1
class Sordariomycetes 1
class Spartobacteria 30 57
class Sphingobacteriia 1569 643 18 26 5 4 13 4 7
class Spirochaetia 678 206 16 4 6 8 1
class Synergistia 1164 467 236 3 1 3 1 1 11 4 7
class Thermoanaerobaculia 80
class Thermococci 3 1 1
class Thermodesulfobacteria 150 49 1 1 2
class Thermodesulfovibrionia Umezawa et al. 2021 170 5
class Thermoflexia 4
class Thermoleophilia 20 103 1
class Thermolithobacteria 55
class Thermomicrobia 23 2 1
class Thermoplasmata 36 36 1 1
class Thermoprotei 7
class Thermotogae 52 41 1 4 6
class Tissierellia 1554 1201 512 10 14 5 8 15 8 7
class Tremellomycetes 1 13
class unclassified Cyanobacteria 1
class Verrucomicrobiae 1342 1067 493 17 26 21 9 13 12 8 3
class Vicinamibacteria 1
class Zetaproteobacteria 34 1 1 1
cohort Endopterygota 3 3
cohort Paraneoptera 191 2 11 5 1
cohort Polyneoptera 7 7 1 1
family 1
family 'Williamsiaceae' 2
family Acanthopleuribacteraceae 58
family Acaryochloridaceae 3
family Acetobacteraceae 513 368 2 1 1 1 2 4 3
family Acholeplasmataceae 1414 810 19 15 2 8 4 6
family Acidaminococcaceae 1446 1150 565 24 22 10 13 13 11 7 7
family Acidiferrobacteraceae 17 4
family Acidimicrobiaceae 192 416 2 1 3
family Acidithiobacillaceae 39 1 1
family Acidobacteriaceae 259 197 87 1 2 4 2
family Acidothermaceae 47 1
family Actinomycetaceae 1255 1095 634 30 24 6 1 8 12 6 7
family Actinopolymorphaceae 99 1 1
family Actinopolysporaceae 325 209 4 1
family Aerococcaceae 649 1021 80 2 3 1 10 4 7
family Aeromonadaceae 351 251 7 1 4 1 3 1 4 2
family Akkermansiaceae 1360 1116 811 30 36 23 16 18 10 8 4
family Alcaligenaceae 1549 208 6 10 3 1 2 4 7
family Alcanivoracaceae 193 21 1 1
family Algiphilaceae 45
family Alicyclobacillaceae 2 447 7 3 6 4
family Alsobacteraceae 2
family Alteromonadaceae 532 481 1 1 2 1 4
family Amaranthaceae 4
family Amoebophilaceae 1400 3 1 1 5
family Anaerolineaceae 272 269 8 1 5 4
family Anaeromyxobacteraceae 1 642 1 1 1
family Anaeroplasmataceae 157 464 128 3 1 2 5 2
family anamorphic Herpotrichiellaceae 1
family Anaplasmataceae 402 28 1 1 2 4 2
family Aphanizomenonaceae 1046 3 4 4 7
family Aphanothecaceae 5 1 1
family Aphididae 3 5
family Aquificaceae 10 43 2 4 3
family Archaeoglobaceae 1
family Archangiaceae 59 93 1 1
family Arcobacteraceae Waite et al. 2017 78 20 1 1 4 1
family Ardenticatenaceae 21 3 1
family Armatimonadaceae 1
family Aspergillaceae 1 1
family Asteraceae 4
family Atopobiaceae 589 804 165 4 10 1 7 7 3
family Aurantimonadaceae 19 16 1 1
family Azonexaceae 135 23 1 1
family Azospirillaceae 793 574 1 2 1 3 7 4 2
family Babyloniidae 1
family Bacillaceae 1448 945 232 3 31 5 12 14 8 7
family Bacillales Family X. Incertae Sedis 1559 619 3 9 7
family Bacillidae 7 6 1 1
family bacterial virus 1
family Bacteriovoracaceae 8 58 1 1 1
family Bacteroidaceae 1572 1253 784 35 35 29 20 18 15 8 7
family Balneatrichaceae 17
family Balneicellaceae 13
family Balneolaceae 64 634 1 2 3
family Barnesiellaceae 1036 513 17 11 8 10 18 9 8
family Bartonellaceae 46 15 1 4
family Bdellovibrionaceae 17 10 1 1 1 1
family Beijerinckiaceae 46 10 4
family Bernardetiaceae 122 2 1
family Beutenbergiaceae 1
family Bifidobacteriaceae 1556 1250 812 34 36 27 19 18 15 8 7
family Blastocatellaceae 18 1 1
family Blastochloridaceae 5 1
family Blastocystidae 2
family Blattabacteriaceae 1 4
family Bogoriellaceae 16 42 4
family Borreliaceae 17 2 1 4
family Boseaceae 7 1 1 4
family Brachyspiraceae 24 13 1 4
family Braconidae 1
family Bradymonadaceae 1
family Bradyrhizobiaceae 64 58 11 1 1 1 4 1
family Breoghaniaceae 1
family Brevibacteriaceae 132 117 60 1 1 8 7
family Brevinemataceae 5 1
family Brucellaceae 147 47 25 4 1 1 3 4
family Bruguierivoracaceae Li et al. 2021 5 26 1 4
family Bryobacteraceae 19 1
family Budviciaceae 278 1 15 1 4
family Burkholderiaceae 1396 406 27 17 3 1 3 13 4 7
family Caedimonadaceae 1
family Caldicoprobacteraceae 40 236
family Caldilineaceae 509 370 2 5 3 7
family Caldisericaceae 7 1
family Calditrichaceae 287 10 1 7
family Caliciviridae 1
family Calotrichaceae 641 106 1 4 6
family Campylobacteraceae 619 466 265 3 7 2 7 6 8 7
family Candidatus Babeliaceae 3
family Candidatus Brocadiaceae 12 1
family Candidatus Competibacteraceae 177 2 1
family Candidatus Desulfofervidaceae 1
family Candidatus Methanomethylophilaceae 23
family Candidatus Midichloriaceae 1 1
family Candidatus Nanopelagicaceae 1 3
family Candidatus Paracaedibacteraceae 1
family Candidatus Scalinduaceae Lodha et al. 2021 12
family Canidae 4
family Cardiobacteriaceae 37 158 2 1 1
family Carnobacteriaceae 990 725 325 13 5 5 1 3 9 4 7
family Catabacteriaceae 192 99 1 1 1 8 6
family Catalimonadaceae 51
family Catenulisporaceae 3 4
family Caulobacteraceae 707 173 9 1 4 6 4 1
family Celerinatantimonadaceae 6
family Cellulomonadaceae 114 118 4 1 4
family Cellvibrionaceae 104 82 1 4
family Cenarchaeaceae DeLong and Preston 1996 2
family Cesiribacteraceae 47
family Chamaesiphonaceae 5 3
family Chelatococcaceae 4 3 1
family Chitinispirillaceae 17 2
family Chitinivibrionaceae 2
family Chitinophagaceae 724 965 5 5 1 1 9 4 6
family Chlamydiaceae 1 2 1 1
family Chlorobiaceae 1266 82 1 5 4 2
family Chloroflexaceae 2 2 1
family Chlorogloeopsidaceae 12
family Christensenellaceae 296 180 28 24 3 1 14 10 4 7
family Chromatiaceae 1290 600 2 1 3 6 4 6
family Chromobacteriaceae 211 109 1 4 1
family Chroococcaceae 627 2 1 2
family Chroococcidiopsidaceae 1 1 1
family Chrysiogenaceae 272 18 1 1 1
family Chthoniobacteraceae 30 12
family Chthonomonadaceae 5 123 3
family Clostridiaceae 1571 1253 788 35 36 20 17 17 15 8 7
family Clostridiales Family XI. Incertae Sedis 217
family Clostridiales Family XVI. Incertae Sedis 878 58 4 3 1 2
family Clostridiales Family XVII. Incertae Sedis 55 141 1 1 7 4 2
family Coccidae 159 3
family Coelosphaeriaceae 33
family Cohaesibacteraceae 1 1
family Coleofasciculaceae 12 3
family Colwelliaceae 4 186 1 2 4
family Comamonadaceae 1392 231 111 3 2 9 7 4 6
family Conexibacteraceae 6 8
family Coprobacillaceae Verbarg et al. 2014 1552 949 393 30 5 5 11 8 2 7
family Coprothermobacteraceae 13 60 7
family Coriobacteriaceae 1560 1098 781 26 34 7 18 13 8 7
family Corynebacteriaceae 802 699 445 13 8 2 2 7 12 8 1
family Coxiellaceae 37 42 2 1 1 1
family Crenotrichaceae 3
family Criblamydiaceae 43
family Crocinitomicaceae 28 3 1 1
family Cryomorphaceae 104 1 1
family Cryptococcaceae 13
family Cryptosporangiaceae 1
family Cryptosporidiidae 1
family Cyanobacteriaceae 245 34 1
family Cyanobacteriaceae 246 34 1
family Cyanobiaceae Salazar et al., 2020 3 5 1 1 4
family Cyanothecaceae 1
family Cyclobacteriaceae 344 1 4
family Cytophagaceae 1433 851 3 4 1 5 4 6
family Debaryomycetaceae 1
family Deferribacteraceae 395 116 1 1 3 4 4
family Defluviitaleaceae 320 18 3 3 9
family Dehalococcoidaceae 94 64 1 1 1 1
family Deinococcaceae 739 168 6 1 1 3 4 4
family Demequinaceae 12 74 1
family Dermabacteraceae 292 89 55 1 1 1 4
family Dermacoccaceae 13 32 2 1 1 1 1
family Dermatophilaceae 1 9 1
family Dermocarpellaceae 1
family Desulfallaceae Watanabe et al. 2020 678 244 3 1 1 7
family Desulfarculaceae 249 1
family Desulfobacteraceae 364 705 2 2 7 7 6 2
family Desulfobulbaceae 23 138 1 1 3
family Desulfocapsaceae 15 17 1 3
family Desulfohalobiaceae 278 76 3 7
family Desulfomicrobiaceae 93 296 1 7 8
family Desulfonatronaceae 289 46 2
family Desulfovibrionaceae 1510 1100 646 21 32 20 14 14 15 8 7
family Desulfurellaceae 5 12 4
family Desulfurobacteriaceae 19 1
family Desulfurococcaceae 1
family Desulfuromonadaceae 772 116 3 3 7 5
family Devosiaceae 491 73 1 2 4
family Diapheromeridae 1
family Dictyoglomaceae 87 2 1
family Dientamoebidae 1
family Dietziaceae 89 165 2 2 1
family Dysgonomonadaceae 1258 771 46 4 7 2 7 4 7
family Ectothiorhodospiraceae 1058 278 1 3 7 4 2
family Edwardsiidae 36 1
family Eggerthellaceae 1540 1219 774 35 35 13 14 14 15 8 7
family Egibacteraceae 1
family Egicoccaceae 1
family Elioraeaceae 3
family Elusimicrobiaceae 7 65 7 3 1 1
family Emcibacteraceae 152
family Endomicrobiaceae 1
family Endozoicomonadaceae 6 1
family Enterobacteriaceae 1508 760 593 30 32 17 18 17 15 8 7
family Enterococcaceae 1443 437 140 29 28 7 6 11 11 8 4
family Entomoplasmataceae 683 83 1 3 4 2
family Eriococcidae 1 11
family Erwiniaceae 389 391 176 4 2 11 1 4 2
family Erysipelotrichaceae 1569 1252 785 34 36 13 13 17 14 7 7
family Erythrobacteraceae 123 51 2 1 1 4
family Eubacteriaceae 1562 1253 299 35 36 20 16 13 15 8 7
family Eubacteriales Family XII. Incertae Sedis 429 685 18 6 8 6
family Eubacteriales Family XIII. Incertae Sedis 1302 1162 656 19 31 4 1 12 15 4 7
family Euzebyaceae 908 68 1 1 1
family Fabaceae 430 11 2 1 1 3
family Fastidiosibacteraceae 15
family Faucheaceae 10
family Ferrimonadaceae 13 43 1
family Ferrovaceae 2
family Fervidobacteriaceae 17 1 1 4 1
family Fibrobacteraceae 116 251 140 2 1
family Fimbriimonadaceae 2 44 1
family Flammeovirgaceae 346 397 1 3 1 4
family Flavobacteriaceae 1369 567 455 1 3 7 2 8 4 7
family Flexibacteraceae 8 1 2 4
family Fortieaceae 16
family four o'clock family 1
family Francisellaceae 70 81 2 2 4 1
family Frankiaceae 2 6 1 4
family Fulvivirgaceae 7 160 2 1 4
family Fusobacteriaceae 728 593 121 4 7 8 2 2 4 8 6
family Gaiellaceae 44 2
family Gallionellaceae 199 29 1 2 1
family Geminicoccaceae 56 2
family Gemmataceae 9 15 1 1 1
family Gemmatimonadaceae 8 33 1 1 1
family Geobacteraceae 95 74 5 4 1
family Geodermatophilaceae 19 119 1 1 4
family Gloeobacteraceae 9 1 1 1
family Gloeotrichiaceae 3
family Glycomycetaceae 72 160 2 1 1
family Gomontiellaceae 102 2 1
family Gomphosphaeriaceae 34
family Gordoniaceae 66 104 1 1 4
family Gottschalkiaceae 161 4 3 6
family Gracilibacteraceae 530 9 3 3 7
family Granulosicoccaceae 84 1
family great apes 1
family Hafniaceae 82 58 14 2 2 4 1 3
family Hahellaceae 177 215 2 1 3
family Halanaerobiaceae 330 264 1 3 9 4 2
family Halieaceae 69 1 1
family Haliscomenobacteraceae 1 103 3
family Haloarculaceae 1
family Halobacteriaceae 4 1 1
family Halobacteriaceae Clade I 1 1
family Halobacteriovoraceae 7 36 1 4
family Halobacteroidaceae 50 426 3 3 1 4
family Haloferacaceae 1 1
family Halomonadaceae 575 517 1 2 4 3 4 3
family Haloplasmataceae 34 1 2
family Halorubraceae 2
family Halothiobacillaceae 18 121 2
family Hapalosiphonaceae 1
family Helicobacteraceae 450 50 3 1 2 8 1
family Heliobacteriaceae 683 240 4 2 5 8 1 5
family Herpetosiphonaceae 1 5
family Hesperiidae 2
family Heteroleibleiniaceae 14
family Holophagaceae 733 621 2 5
family Holosporaceae 1 3
family Hungateiclostridiaceae 592 726 142 7 35 2 6 8 4 6
family Hydrogenophilaceae 769 254 5 1 2 1
family Hydrogenothermaceae 26 1 1
family Hyellaceae 1
family Hymenobacteraceae 1043 229 2 1 9 4 1
family Hyphomicrobiaceae 716 120 1 1 2 4 5
family Hyphomonadaceae 93 663 1 1 5 2 3
family Iamiaceae 24
family Icacinaceae 1
family Ichthyobacteriaceae 1
family Idiomarinaceae 63 31 1 1 1
family Ignavibacteriaceae 37 49 1 1
family Ilumatobacteraceae 116
family Immundisolibacteraceae 3
family Intrasporangiaceae 57 74 1 4
family Isosphaeraceae 8 5 1 4
family Jatrophihabitantaceae 6 1
family Jiangellaceae 23 14 4 1
family Jonesiaceae 38 115
family Kaistiaceae 10 42 1
family Kallotenuaceae 20
family Kangiellaceae 41 1
family Kiloniellaceae 357 501 5 2
family Kineosporiaceae 18 83 1 1
family Kofleriaceae 129 28 3
family Kordiimonadaceae 171
family Kosmotogaceae 12 14 1 1
family Kribbellaceae 83 320 5
family Ktedonobacteraceae 1
family Kytococcaceae 1 2 1
family Labilitrichaceae 39
family Lachnospiraceae 1572 1253 791 35 36 29 20 18 15 8 7
family Lacipirellulaceae 7
family Lactobacillaceae 1528 1253 813 32 36 19 12 18 15 8 7
family Laqueidae 1
family Lawsonellaceae 1
family Legionellaceae 1027 74 1 1 7 4 3
family Lentisphaeraceae 4
family Leptolyngbyaceae 348 3 1 1 4 2
family Leptospiraceae 399 69 4 2 4
family Leptotrichiaceae 181 222 38 2 2 4 1
family Leuconostocaceae 1212 1134 102 3 9 1 5 2 8 4 6
family Lewinellaceae 72 8
family Limnochordaceae 1 1
family Listeriaceae 1039 291 1 1 1 4 3 4 1
family Litoricolaceae 101 39 1 3
family Luteibaculaceae Bowman 2020 1
family Magnetococcaceae 22 1 1
family Maricaulaceae 11 34 1
family Marinifilaceae 307 1 4 4
family Marinilabiliaceae 619 1 7 6 1
family Marinobacteraceae Liao et al. 2020 79 171 1 1 4
family Mariprofundaceae 34 1 1 1
family Marivirgaceae 2 2 1
family Melioribacteraceae 794 16 2 6 4
family Merismopediaceae 3
family Mesoaciditogaceae 7
family Methanobacteriaceae 409 246 220 5 3 11 1 11 6 2 1
family Methanococcaceae 1 2
family Methanocorpusculaceae 4 1 1
family Methanomassiliicoccaceae 36 31 1 1
family Methanoregulaceae 2
family Methanosarcinaceae 7 3 1 3
family Methanotrichaceae 1
family Methylacidiphilaceae 12 1 1
family Methylobacteriaceae 95 72 4 1 4
family Methylococcaceae 9 231 1 3 4
family Methylocystaceae 26 21 1 4
family Methylophilaceae 675 295 1 1 1 2
family Methylothermaceae 49
family Microbacteriaceae 502 683 49 2 3 5 4 5
family Microbulbiferaceae 7 1 1 4
family Micrococcaceae 603 630 151 22 25 5 1 4 7 6
family Microcoleaceae 343 364 1 1 1 4
family Microcystaceae 6 2 1
family Micromonosporaceae 466 294 1 1 1 3 4 6
family Micropepsaceae 13
family Microscillaceae 163 1
family Microviridae 4 7
family Mooreiaceae 10
family Moraxellaceae 785 576 21 4 7 1 7 5 10 8 6
family Morganellaceae 246 557 17 1 17 2 1 10 11 7 7
family Moritellaceae 1 1 1 1
family Motilibacteraceae 19
family Muribaculaceae 2 1 4
family Mycobacteriaceae 253 110 59 2 1 2 4 1
family Mycoplasmataceae 1295 854 11 6 2 10 4 5
family Mycoplasmoidaceae 48
family Myoviridae 1
family Myxococcaceae 1 4 1 4
family Mzabimycetaceae 158
family Nakamurellaceae 2 1 4
family Nannocystaceae 101 27 1
family Natranaerobiaceae 46 1
family Nautiliaceae 3 37 1 2 1
family Neisseriaceae 516 199 68 5 10 2 3 3 7 4 7
family Neomegalonemataceae 25 1
family Nitratiruptoraceae Waite et al. 2017 2 1
family Nitriliruptoraceae 5 6 2
family Nitrosomonadaceae 12 354 8 4 3 3 4
family Nitrosopumilaceae 1 4 1
family Nitrososphaeraceae 14 1
family Nitrospinaceae 4 5
family Nitrospiraceae 304 54 1 1 4 5
family Nocardiaceae 175 18 21 1 2 4 1
family Nocardioidaceae 219 460 1 2 4 6
family Nocardiopsaceae 360 1 2 1 4
family Nostocaceae 1337 5 2 1 4 4 7
family Oceanospirillaceae 405 315 1 1 4
family Odoribacteraceae 1466 1143 619 27 33 14 16 16 14 8 7
family Oleiphilaceae 3
family Oligoflexaceae 1
family Oligosphaeraceae 45
family Opitutaceae 15 52 1 1 1 4
family Orbaceae 9 1 4
family Ornithinimicrobiaceae 35 20 1 4
family Oscillatoriaceae 719 132 4
family Oscillospiraceae 1568 1253 788 35 36 29 19 18 15 8 7
family Oxalobacteraceae 984 534 258 4 25 3 8 10 7 7
family Paenibacillaceae 1252 1075 1 29 4 6 9 4 7
family Paludibacteraceae 5 144 1 3 2 2 1 4
family Parachlamydiaceae 2 3 1
family Parvibaculaceae 2 4
family Parvoviridae 2
family Parvularculaceae 32 1
family Pasteurellaceae 1271 1008 548 19 29 6 7 17 10 4 7
family Pasteuriaceae 69
family Patulibacteraceae 1 6
family Pectobacteriaceae 74 488 2 1 1 1 4 3
family Pelagibacteraceae 4 1 1
family Peptococcaceae 1548 1166 520 4 24 6 9 13 8 7
family Peptoniphilaceae 1523 1163 505 9 7 4 8 15 8 7
family Peptostreptococcaceae 1378 1248 789 33 30 11 8 15 13 7 7
family Perlucidibacaceae Liao et al. 2020 3
family Persicobacteraceae 1 86 1 4
family Petrotogaceae 19 21 1 4 6
family phages with long non-contractile tails 1
family Phreatobacteraceae 1 1
family Phycisphaeraceae 2 1
family Phyllobacteriaceae 31 39 35 1 1 4
family Pirellulaceae Dedysh et al. 2020 3 43 1
family Piscirickettsiaceae 198 354 2 3 1 4
family Planctomycetaceae 8 104 1 1
family Planococcaceae 784 1028 39 22 2 6 15 6 7
family Pleioneaceae 4
family Pleomorphomonadaceae 5 7 1
family Polyangiaceae 59 3 1 1 1 4
family Porphyromonadaceae 1561 1240 524 22 35 6 2 10 15 7 7
family Porticoccaceae 2
family Prevotellaceae 1545 1243 568 16 21 27 3 17 15 8 7
family Prochloraceae 2 2 1 4
family Prochlorococcaceae 1
family Prochlorotrichaceae 5 3
family Prolixibacteraceae 171 1 4 1
family Promicromonosporaceae 3 57 2 1 4
family Propionibacteriaceae 61 523 118 9 13 1 4 6 4
family Proteidae 5 1
family Proteinivoraceae 1222 513 7 8 7
family Pseudanabaenaceae 445 6 2 4 2
family Pseudoalteromonadaceae 35 47 1 4 1
family Pseudococcidae 37 2 1
family Pseudomonadaceae 463 460 51 2 9 5 11 4 8 5
family Pseudonocardiaceae 434 387 1 3 4 4
family Pseudoxanthobacteraceae 5
family Psychromonadaceae 17 39 4
family Puniceicoccaceae 921 424 7 1 5 1 4
family Pyrinomonadaceae 44
family Rarobacteraceae 58
family Reichenbachiellaceae 43
family Reyranellaceae 5
family Rhabdochlamydiaceae 132
family Rhizobiaceae 396 95 8 14 1 1 2 4 7
family Rhodanobacteraceae 1074 232 1 3 4 3
family Rhodobacteraceae 316 306 4 1 4 1 1 4 4 7
family Rhodobiaceae 4 11 3 4
family Rhodocyclaceae 943 398 70 1 1 1 1
family Rhodospirillaceae 1267 925 370 25 5 14 13 4 7
family Rhodothalassiaceae 14 14 1
family Rhodothermaceae 1444 168 6 2 7 4 1
family Rhodovibrionaceae 327 448 1 8
family Rickettsiaceae 801 237 1 4 4 6
family Rikenellaceae 38 1223 733 34 35 23 18 18 10 8 7
family Rivulariaceae 694 107 4 6
family Robiginitomaculaceae 48 2
family Roseiarcaceae 4
family Roseiflexaceae 1 11 1
family Roseivirgaceae 46
family Roseobacteraceae Pujalte et al. 2014 87 65 1 1 4 2
family Ruaniaceae 1
family Rubricoccaceae 9
family Rubritaleaceae 521 176 5 2
family Rubrobacteraceae 10 79 3 2 3
family Ruminococcaceae 1572 1253 788 28 36 6 20 18 15 4 7
family Saccharomycetaceae 4 5
family Saccharospirillaceae 40 462 1 1
family Salinibacteraceae 2
family Salinisphaeraceae 17 1
family Salinivirgaceae 1
family Salisaetaceae 292 138 1 4
family Sandaracinaceae 11 1
family Sanguibacteraceae 4 3 1 1
family Saprospiraceae 74 62 1
family Schleiferiaceae 20 1
family Scolopacidae 3
family Scytonemataceae 3 4
family Sedimentisphaeraceae 1 3
family Segniliparaceae 37 2 1
family Selenomonadaceae 1545 717 99 5 12 8 1 15 8 7
family Shewanellaceae 982 162 2 3 8 5
family Simkaniaceae 11 1
family Sinobacteraceae 1137 156 2 1 3 1
family Sneathiellaceae 11
family Solanaceae 11
family Solibacteraceae 1 1 1
family Solirubrobacteraceae 12 22
family Sphaerobacteraceae 32 1
family Sphaerochaetaceae 3 2 1 1
family Sphingobacteriaceae 1567 643 4 24 5 4 13 4 7
family Sphingomonadaceae 567 666 17 14 2 1 7 4 6
family Sphingosinicellaceae 10 1 4
family Spirillaceae 4 14
family Spirochaetaceae 382 132 1 3 4 1
family Spiroplasmataceae 436 1 6 4
family Spirosomaceae 1244 691 2 3 4 4 6
family Spirulinaceae 11
family Spongiibacteraceae 192 1 1
family Sporichthyaceae 6 22
family Sporolactobacillaceae 468 172 2 1 1
family Sporomusaceae 1030 846 34 3 5 4 7
family Staphylinidae 2 3
family Staphylococcaceae 1209 378 207 3 3 6 5 5 8 8 5
family Stappiaceae 4 1 4
family Stellaceae 211 1
family Steroidobacteraceae 16 33
family Sterolibacteriaceae 238 63 11 1 4
family Streptococcaceae 1560 1250 774 34 36 16 16 16 15 8 7
family Streptomycetaceae 299 259 2 1 2 8 6
family Streptosporangiaceae 621 185 1 1 1 2
family Succinivibrionaceae 425 290 15 2 1 3 2
family Sulfolobaceae 5
family Sulfuricellaceae Watanabe et al. 2014 6 1 1
family Sulfurovaceae Waite et al. 2017 5 1 1
family Sutterellaceae 1545 1226 713 31 36 17 15 18 15 3 7
family Symbiobacteriaceae 952 319 3 7 3
family Synechococcaceae 447 9 1 1 4
family Synergistaceae 1155 467 236 3 1 3 1 1 10 4 7
family Syntrophaceae 209 63 1 1 4 1
family Syntrophobacteraceae 472 435 2 2 1 2
family Syntrophomonadaceae 1296 564 11 3 4 4 5
family Syntrophorhabdaceae 37 1
family Syntrophotaleaceae 13
family Tannerellaceae 1551 1180 719 35 34 19 17 18 15 8 7
family Temperatibacteraceae 1
family Tepidamorphaceae 6
family Tepidanaerobacteraceae 525 13 1 1 2
family Terasakiellaceae 1
family Terrimicrobiaceae 4
family Thalassobaculaceae 72 3 2
family Thalassospiraceae 356 37 358 3 1
family Thermaceae 550 92 1 1 2 4 5
family Thermoactinomycetaceae 991 622 1 4 4 4 6
family Thermoanaerobacteraceae 1346 359 212 4 10 4 4
family Thermoanaerobacterales Family III. Incertae Sedis 1512 197 1 4 12 7 7
family Thermoanaerobacterales Family IV. Incertae Sedis 39 1
family Thermoanaerobaculaceae 80
family Thermococcaceae 3 1 1
family Thermodesulfobacteriaceae 150 49 1 1 2
family Thermodesulfobiaceae 14 79 17 5 2 2 1
family Thermodesulfovibrionaceae 297 18 3 6
family Thermoflexaceae 4
family Thermoflexibacteraceae 109
family Thermogemmatisporaceae 147 7 1 3
family Thermoguttaceae Dedysh et al. 2020 39 1
family Thermohalobacteraceae Spring 2020 941 4 4 8
family Thermoleophilaceae 48 1
family Thermolithobacteraceae 55
family Thermomicrobiaceae 1
family Thermomonosporaceae 475 70 1 2 4 3
family Thermonemataceae 30 4
family Thermoproteaceae 1
family Thermosediminibacteraceae 103 65 1 6
family Thermosporotrichaceae 11
family Thermosynechococcaceae 1
family Thermotogaceae 53 1 1 4 6
family Thermotomaculaceae 15 1
family Thioalkalibacteraceae 10 1
family Thioalkalispiraceae 54 1 3
family Thiobacillaceae 265 63 6 1 1
family Thiofilaceae 3
family Thiolinaceae 2
family Thioprofundaceae 7
family Thiotrichaceae 1052 77 1 3 5 1 3
family Thiovulaceae Waite et al. 2017 9 12 1 3
family Thorselliaceae 58
family Tissierellaceae 93 562 1 1 2 4 5 7 3
family Treponemataceae 381 59 1 5 8 1
family Trichocoleusaceae 2
family Trichocomaceae 1
family Tropherymataceae 68 1
family Trueperaceae 20
family Tsukamurellaceae 89 6 4 1
family Turicibacteraceae Verbarg et al. 2014 1053 751 474 16 8 6 2 11 11 4 5
family unclassified Actinobacteria (class) (miscellaneous) 1
family unclassified Bacillales 19 40
family unclassified Burkholderiales 200 198 18 15 3 4 3
family unclassified Clostridiales 719 783 32 35 5 3 1 8 4
family unclassified Rickettsiales 4
family Unionidae 213 1
family Vallitaleaceae Quemeneur et al. 75 3 4 9
family Veillonellaceae 1571 1246 744 30 32 14 8 16 12 8 7
family Verrucomicrobia subdivision 3 14 27 2
family Verrucomicrobiaceae 1339 227 220 3 1 2 1 3
family Vibrionaceae 95 111 3 4 4
family Vicinamibacteraceae 1
family Victivallaceae 301 283 4 6 2 5 6
family Viviparidae 100 1 1
family Waddliaceae 10 1
family Weeksellaceae 80 101 8 1 1 1 4
family Wenzhouxiangellaceae 42 1
family Woeseiaceae 1
family Xanthobacteraceae 26 20 1 1 6
family Xanthomonadaceae 1281 318 19 4 7 9 4 6
family Xenococcaceae 1
family Yersiniaceae 1183 203 20 2 6 7 13 10 7
family Zoogloeaceae 375 150 1 1 1 2 1 4 3
family Zymomonadaceae 1 1 4
forma specialis Buchnera aphidicola (Acyrthosiphon kondoi) 1
forma specialis Buchnera aphidicola (Acyrthosiphon pisum) 2
forma specialis Buchnera aphidicola (Aphis glycines) 1
forma specialis Buchnera aphidicola (Cinara cedri) 1
forma specialis Buchnera aphidicola (Cinara confinis) 1
forma specialis Buchnera aphidicola (Cinara pseudotaxifoliae) 1
forma specialis Buchnera aphidicola (Cinara tujafilina) 1
forma specialis Buchnera aphidicola (Diuraphis noxia) 1
forma specialis Buchnera aphidicola (Myzus persicae) 4
forma specialis Buchnera aphidicola (Schizaphis graminum) 1
forma specialis Buchnera aphidicola (Schlechtendalia chinensis) 1
forma specialis Buchnera aphidicola (Tuberolachnus salignus) 1
forma specialis Buchnera aphidicola (Uroleucon ambrosiae) 1
forma specialis cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 1
forma specialis endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 1
forma specialis primary endosymbiont of Heteropsylla cubana 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans 4
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 3
genus 1
genus 1
genus 1
genus 1
genus 1
genus 'Grimontella' 1
genus 'Haloanella' 2
genus 'Kouleothrix' 1
genus 'Terrahaemophilus' 1
genus Abiotrophia 93 143 9 2 2 2
genus Absiella 397 446 12 1 6 1
genus Abyssivirga 1
genus Acanthopleuribacter 58
genus Acaryochloris 3
genus Accumulibacter 3
genus Acetanaerobacterium 605 123 1 3 9
genus Acetatifactor 1137 2 1 3 4
genus Acetilactobacillus 3
genus Acetitomaculum 865 138 1 3 3
genus Acetivibrio 1543 1156 32 2 26 9 9 4 7
genus Acetoanaerobium 636 4 7 1
genus Acetobacter 15 19 1 1 3
genus Acetobacterium 1539 546 2 4 11 4 7
genus Acetobacteroides 297
genus Acetohalobium 40 3 1 1
genus Acetomicrobium 14 48 1
genus Acetonema 288 2 2
genus Acholeplasma 1078 809 6 1 2 6 4 3
genus Achromatium 11
genus Achromobacter 130 1 9 1 1 4 2
genus Acidaminobacter 375 385 3 6 3
genus Acidaminococcus 1090 633 96 1 4 5 1 5 5 6 3
genus Acidianus 1
genus Acidibacter 47
genus Acidibrevibacterium 1
genus Acidicaldus 2
genus Acidicapsa 66 1
genus Acidiferrobacter 11 3
genus Acidihalobacter 1 1
genus Acidimicrobium 169 1 1
genus Acidiphilium 37 16 1 1
genus Acidipropionibacterium 21 1 1 6
genus Acidisoma 2
genus Acidisphaera 1 1
genus Aciditerrimonas 180 2
genus Acidithiobacillus 39 1 1
genus Acidobacterium 1 3
genus Acidocella 2 1
genus Acidothermus 47 1
genus Acidovorax 88 42 1 1 1 1 4 4
genus Acinetobacter 345 313 16 4 6 1 7 5 1 8 4
genus Acrocarpospora 4
genus Actibacter 1
genus Actimicrobium 3
genus Actinoallomurus 2
genus Actinoalloteichus 1 4
genus Actinobacillus 883 296 90 7 4 2 4 5
genus Actinobaculum 124 8 17 7 2 1
genus Actinocatenispora 406 121 2
genus Actinocorallia 3 4 2
genus Actinokineospora 4 3
genus Actinomadura 45 42 1 1 2
genus Actinomyces 1155 988 579 29 10 5 5 10 4 7
genus Actinomycetospora 9 2
genus Actinoplanes 15 116 1 4
genus Actinopolymorpha 99 1 1
genus Actinopolyspora 325 206 4 1
genus Actinosynnema 1
genus Actinotalea 1
genus Actinotignum 27 66 29 3
genus Acutalibacter 9
genus Adhaeribacter 32
genus Adlercreutzia 1139 537 26 5 6 1 6 5 5 6
genus Advenella 5 1 3
genus Aequorivita 1 9 2 1
genus Aeribacillus 31 1 1
genus Aeriscardovia 183
genus Aerococcus 26 361 16 1 2 4
genus Aeromicrobium 12 3 1 1 3
genus Aeromonas 152 7 1 4 1 4
genus Aerophilus 1
genus Aerosphaera 48
genus Aerosticca Watanabe et al. 2020 3
genus Aestuariibacter 2
genus Aestuariicola 1
genus Aestuariispira 514 2
genus Afifella 1
genus Afipia 4 1 3
genus Agaribacter 303
genus Agarilytica 1
genus Agarivorans 22 1
genus Agathobacter 1 1
genus Agathobaculum 1174 1 30 8 4 10
genus Aggregatibacter 416 227 172 3 2 2 1 8 1 5
genus Aggregicoccus 1
genus Agreia 2
genus Agrilactobacillus 150 3
genus Agrobacterium 68 1 4
genus Agrococcus 29 2 3 1 1
genus Agromyces 254 118 1 2 1 1
genus Ahniella 1
genus Ahrensia 1
genus Akkermansia 1364 1116 811 30 36 23 16 18 10 8 4
genus Albibacterium 1
genus Albidovulum 1 1
genus Albimonas 6
genus Alcaligenes 13 2 1 3
genus Alcanivorax 193 11 1 1
genus Algibacter 1 3 1
genus Algicola 45
genus Algimonas 17 2
genus Algiphilus 45
genus Algivirga 1
genus Algorimarina 1
genus Algoriphagus 119 1 3
genus Aliarcobacter 52 3 1 4 1
genus Alicycliphilus 11 1 3 1
genus Alicyclobacillus 2 170 3 3 4 3
genus Aliicoccus 2
genus Aliidiomarina 18
genus Aliifodinibius 208
genus Aliihoeflea 1
genus Aliivibrio 1 1
genus Alishewanella 276 56 2
genus Alistipes 1222 733 34 33 21 18 11 10 8 7
genus Alkalibacillus 108 5
genus Alkalibacter 121 2 3
genus Alkalibacterium 512 5 1 1 1 7
genus Alkalibaculum 241 1 2
genus Alkalicoccus 44
genus Alkaliflexus 51 3
genus Alkalihalobacillus 20 29 8 1 3
genus Alkalilimnicola 1
genus Alkalimarinus 16
genus Alkaliphilus 1534 346 4 7 10 4 7
genus Alkalispirillum 1
genus Alkalispirochaeta 1
genus Alkalitalea 1
genus Alkanibacter 1
genus Alkanindiges 2 3
genus Allisonella 232 68 2 3
genus Alloactinosynnema 4
genus Allobacillus 2
genus Allobaculum 113 177 8 2 2
genus Allocatelliglobosispora 2
genus Allochromatium 75 1
genus Allofrancisella 6 1
genus Allofustis 30 2 2
genus Allohahella 175 87 2
genus Alloiococcus 4 92 1
genus Allokutzneria 1 1
genus Alloprevotella 12 457 83 2 3 1 1
genus Alloscardovia 94 185 19 2
genus Allosphingosinicella 15
genus Alsobacter 2
genus Alteracholeplasma 25 48 1 1 1
genus Altererythrobacter 20 2 1 4
genus Alteribacillus 3
genus Alteribacter 14
genus Alterileibacterium 2 6
genus Alterococcus 33 1
genus Alteromonas 26 1 4
genus Altibacter 1
genus Alysiella 4
genus Amaricoccus 54 3 2
genus Amedibacillus 1008 392 12 1 1 6 2
genus Aminicella 715 1
genus Aminiphilus 144 5 5
genus Aminipila 1 1 4
genus Aminivibrio 70
genus Aminobacter 10 1 1
genus Aminobacterium 54 17 4 1
genus Aminomonas 57 4
genus Ammonifex 543 7 1
genus Ammoniphilus 54 40
genus Amoebophilus 1400 3 1 1 5
genus Amphibacillus 31 4
genus Amphritea 41 4
genus Amycolatopsis 21 4 1 4 1
genus Amylibacter 3
genus Amylolactobacillus 2
genus Anabaena 2 3
genus Anabaenopsis 1
genus Anaerobacillus 353 2 20
genus Anaerobacter 59
genus Anaerobacterium 43 47 3 1 4
genus Anaerobiospirillum 12 31 2
genus Anaerobium 361 19 1 9
genus Anaerobranca 1226 491 5 6 7
genus Anaerobutyricum 1133 1 30 32 6 14 9 6
genus Anaerocella 173
genus Anaerococcus 730 690 373 1 5 1 5 9 4
genus Anaerocolumna 1013 8 4 5 1
genus Anaerofilum 1550 651 249 5 8 2 15 7
genus Anaerofustis 303 781 203 9 1 6
genus Anaeroglobus 626 14 6
genus Anaerolinea 114 85 4 1 2 1
genus Anaeromassilibacillus 8 9 1 1
genus Anaeromusa 151 26 2
genus Anaeromyxobacter 1 642 1 1 1
genus Anaerophaga 14 1
genus Anaeroplasma 157 184 48 1 2 2
genus Anaerorhabdus 25
genus Anaerosacchariphilus 1 13
genus Anaerosalibacter 261
genus Anaerosinus 37 34 2
genus Anaerosphaera 133 2
genus Anaerospora 3 204
genus Anaerosporobacter 688 550 1 5 1
genus Anaerostipes 1382 1250 780 35 36 16 18 12 15 8 7
genus Anaerotaenia 3 1
genus Anaerotignum 1142 7 21 5 4 10 4
genus Anaerotruncus 1518 1015 730 22 29 10 1 7 11 7
genus Anaerovibrio 1401 12 9 1 3 9 1
genus Anaerovorax 61 276 13 1 3
genus Anaplasma 10 1
genus Ancylobacter 7
genus Anderseniella 1 4
genus Andreesenia 9
genus Andreprevotia 1
genus Aneurinibacillus 5 60 1 1
genus Angelakisella 7 21
genus Annandia 2
genus Annwoodia 1
genus Anoxybacillus 133 48 3 1 1 1 1 1
genus Anoxybacter 1 1 4
genus Anoxynatronum 750 3
genus Anseongella 1
genus Antarctobacter 1
genus Apibacter 1 1
genus Apilactobacillus 11 3
genus Aquabacterium 7 61 5 1 1
genus Aquamicrobium 14
genus Aquaspirillum 34
genus Aquibacter 7 1
genus Aquicella 9
genus Aquiflexum 11 1
genus Aquihabitans 19
genus Aquiluna 2
genus Aquimarina 5 29 1 4
genus Aquimonas 7 18
genus Aquincola 9
genus Aquipuribacter 5
genus Aquirhabdus 1
genus Aquisalibacillus 3
genus Aquisalimonas 69
genus Aquisphaera 2
genus Aquitalea 16 2 1 4
genus Arabia 1 1 1
genus Arachidicoccus 1 3
genus Arachnia 1 1 2 1
genus Arcanobacterium 59 32 31 1 1 2
genus Archaeoglobus 1
genus Archangium 12 1
genus Arcicella 106 2
genus Arcobacter 78 20 1 1 4 1
genus Arcobacter group 54 18 1 1 4 1
genus Arcticibacterium 1
genus Ardenticatena 21 2
genus Arenibacter 4 1 3
genus Arenimonas 5 35
genus Arhodomonas 13
genus Aridibacter 18
genus Armatimonas 1
genus Aromatoleum 1
genus Arsenicicoccus 4 1
genus Arsenophonus 33 32 1
genus Arthrobacter 187 7 10 1 1 2 4 1
genus Arthromitus 1 4
genus Arthronema 8 1
genus Arthrospira 18 4 1 1
genus Asaccharobacter 11 1 7
genus Asaccharospora 99 1
genus Asaia 4 1
genus Asinibacterium 10
genus Aspergillus 1 1
genus Asteroleplasma 335 73 1 3
genus Asticcacaulis 573 65 2 1 1
genus Atelocyanobacterium 1
genus Atlantibacter 1
genus Atopobacter 7
genus Atopobium 541 430 98 3 3 4 1 3
genus Atopococcus 22
genus Atopomonas 6
genus Atopostipes 82 2
genus Aurantiacibacter 9 1
genus Aurantimicrobium 1
genus Aurantimonas 17
genus Auraticoccus 3 3
genus Aureibacter 5
genus Aureicoccus 1
genus Aureimonas 12 1
genus Aureispira 1
genus Aureitalea 3
genus Auricoccus 1
genus Auritidibacter 1
genus Austwickia 1
genus Avibacterium 173 77 2 1 4
genus Azoarcus 92 4 1 1 1
genus Azohydromonas 10 2
genus Azomonas 4
genus Azonexus 21 1
genus Azorhizobium 6 2
genus Azorhizophilus 3
genus Azospira 10 5 9 1 1
genus Azospirillum 310 358 2 1 3 7 4 2
genus Azotobacter 4 1
genus Babela 2
genus Bacillus 7 6 1 1
genus Bacillus 1055 544 66 1 27 2 8 11 8 6
genus Bacteria 1
genus Bacterioplanes 1 1
genus Bacteriovorax 8 47 1
genus Bacteroides 1572 1253 784 35 35 28 20 18 15 8 7
genus Baia 99
genus Balneatrix 17
genus Balneola 64 253
genus Bariatricus 1 3
genus Barnesiella 970 412 14 4 7 9 2 9 8
genus Barrientosiimonas 30
genus Bartonella 46 15 1 4
genus Basfia 7 1 1
genus Basilea 4 1
genus Bdellovibrio 17 10 1 1 1 1
genus Beduini 1 1
genus Beggiatoa 3 1 1
genus Beijerinckia 2 1
genus Belliella 20 3
genus Bellilinea 5 1
genus Belnapia 4 1
genus Bergeyella 25 5
genus Bermanella 1
genus Bernardetia 94 1
genus Berryella Wylensek et al. 2020 3 1 1
genus Beutenbergia 1
genus Bibersteinia 4 1 1
genus Bifidobacterium 1556 1246 812 34 36 27 15 18 15 8 6
genus Bigelowiella 2 2
genus Bilophila 1417 4 605 21 32 19 13 14 14 1 7
genus Biomaibacter 1
genus Biostraticola 26
genus Bisgaardia 92 1
genus Bittarella 8 8 2
genus Bizionia 2 2
genus Blastocatella 1
genus Blastochloris 5 1
genus Blastococcus 10 1 1 1
genus Blastocystis 2
genus Blastomonas 9 1
genus Blastopirellula 17
genus Blattabacterium 1 4
genus Blautia 1572 1253 789 34 36 27 20 18 15 8 7
genus Blochmannia 385 4 6
genus Bogoriella 11
genus Bombilactobacillus 125
genus Bombiscardovia 15 15
genus Bordetella 47 1 4
genus Borrelia 17 2 4
genus Borreliella 4
genus Bosea 7 1 1 4
genus Bosea 4
genus Boseongicola 2
genus Boudabousia 18
genus Bounagaea 1
genus Bowdeniella 21
genus Bowmanella 62
genus Brachybacterium 262 26 5 1 1 1
genus Brachymonas 3
genus Brachyspira 24 13 1 4
genus Brackiella 16
genus Bradymonas 1
genus Bradyrhizobium 41 2 10 1 4 1
genus Brassicibacter 838 4 3 5
genus Brenneria 55 437 1 1 3
genus Breoghania 1
genus Brevefilum 1
genus Brevibacillus 142 96 1 1 1 4
genus Brevibacterium 132 115 60 1 1 8 7
genus Brevifollis 21
genus Brevinema 5 1
genus Brevirhabdus 1
genus Brevundimonas 35 44 7 1 3 2 4
genus Breznakia 3
genus Breznakibacter 17 2
genus Brochothrix 931 40 1 1 1 1
genus Brockia 26
genus Brucella 14 1 4 1 2
genus Bryobacter 19
genus Buchnera 1 4
genus Bulleidia 297 67 2 2 5
genus Burkholderia 449 35 1 11 1 1 4 5
genus Buttiauxella 138 1
genus Butyribacter 2 1 1
genus Butyricicoccus 738 77 31 34 5 16 1 8
genus Butyricimonas 1210 987 455 14 29 11 9 15 12 5 7
genus Butyrivibrio 1025 1221 416 29 28 17 3 9 8 7
genus Bythopirellula 7
genus Caballeronia 24 4
genus Caedibacter 3
genus Caenispirillum 25
genus Caldalkalibacillus 146 2
genus Caldanaerobacter 64 110 1 1 1
genus Caldanaerobius 45 3
genus Caldanaerovirga 5
genus Caldibacillus 1 1 3
genus Caldicellulosiruptor 1427 94 1 4 12 4 6
genus Caldicoprobacter 40 119
genus Caldilinea 509 9 3 7
genus Caldimicrobium 2 1
genus Caldimonas 24
genus Caldinitratiruptor 307 7
genus Caldisalinibacter 539 2
genus Caldisericum 7 1
genus Calditerricola 2
genus Calditerrivibrio 3 1 1
genus Caldithrix 287 10 1 7
genus Calochaete 16
genus Caloramator 1536 827 1 2 9 9 12 7
genus Caloranaerobacter 2 7
genus Caloribacterium 13
genus Calothrix 642 106 4 6
genus Camelimonas 3
genus Caminibacter 1 3 2
genus Caminicella 23 771 3
genus Campylobacter 572 451 263 3 7 2 7 6 8 7
genus Candidatus Azobacteroides 80 4
genus Candidatus Desulforudis 1
genus Candidatus Methanoregula Brauer et al. 2006 1
genus Candidatus Nitrosoglobus 1
genus Candidatus Tenderia Eddie et al. 2016 1
genus Candidatus Velamenicoccus Kizina et al. 2022 1
genus Candidatus Viadribacter Braun and Szewzyk 2016 4
genus Candidatus Walczuchella 1
genus Candidimonas 1
genus Canicola 79
genus Canis 4
genus Capnocytophaga 19 14 2 1 1 4 1
genus Caproiciproducens 1 29 1 9 4
genus Carboxydocella 878 58 4 3 1 2
genus Carboxydothermus 25 4
genus Carboxylicivirga 286 1 1
genus Cardinium 1
genus Cardiobacterium 37 121 2 1
genus Carnimonas 19
genus Carnobacterium 63 5 8 1 1 4 2
genus Carsonella 1
genus Casaltella 796 3 6
genus Castellaniella 1
genus Catabacter 192 98 1 1 8 6
genus Catellatispora 1
genus Catellicoccus 1
genus Catenibacterium 482 390 292 14 2 8 4 2
genus Catenisphaera 86 1 2
genus Catenovulum 1 1
genus Catenulispora 3 4
genus Catonella 1014 1217 1 1 16 3 6 4
genus Caulobacter 10 16 1 1 4
genus Cecembia 17
genus Cedecea 101 1
genus Celeribacter 3
genus Celerinatantimonas 6
genus Cellulomonas 27 118 4 1 4
genus Cellulophaga 4 2 4
genus Cellulosibacter 155
genus Cellulosilyticum 1156 15 2 1 10 4
genus Cellulosimicrobium 2 1 1
genus Cellvibrio 8 47 1 3
genus Cenarchaeum DeLong and Preston 1996 1
genus Centipeda 6
genus Cerasicoccus 356 218 1 3 1
genus Cereibacter 1 9 1 2
genus Cesiribacter 38
genus Cetobacterium 92 55 4 2 1
genus Chamaesiphon 5 3
genus Chania 12 3
genus Chelativorans 2 9 1
genus Chelatococcus 4 1
genus Chelonobacter 41 2 1
genus Chiayiivirga 1
genus Chishuiella 5
genus Chitinilyticum 3
genus Chitinimonas 20 1
genus Chitinispirillum 17 2
genus Chitinivibrio 2
genus Chitinivorax 11
genus Chitinophaga 55 33 3 1 4
genus Chlamydia 1 2 1 1
genus Chloracidobacterium 17 3
genus Chlorobaculum 1265 6 1 5 4 2
genus Chlorobium 4 1 1
genus Chloroflexus 2 1
genus Chlorogloeopsis 12
genus Chloroherpeton 7 23
genus Chondrocystis 1
genus Chondromyces 59 1 1
genus Christensenella 295 179 28 16 3 1 2 10 4 7
genus Chromatium 310 3
genus Chromobacterium 146 10 1 4 1
genus Chromocurvus Csotonyi et al. 2011 1
genus Chromohalobacter 1 2 1
genus Chroococcidiopsis 1 1 1
genus Chroococcus 627 2 2
genus Chryseobacterium 117 41 2 1 1 4 6
genus Chryseolinea 32 4
genus Chryseomicrobium 23 2
genus Chthoniobacter 30 12
genus Chthonomonas 5 123 3
genus Citreitalea 1
genus Citricoccus 3 1
genus Citrifermentans 2 10 2
genus Citrobacter 291 16 55 9 17 3 4 11 7 3
genus Citromicrobium 3
genus Clavibacter 1 4
genus Cloacibacillus 131 150 106 3 2 1 1 1
genus Cloacibacterium 17 2 1 1 3
genus Cloacimonas 1
genus Clostridiisalibacter 7
genus Clostridioides 100 488 33 3 7 5 6 6
genus Clostridium 1571 1246 778 34 35 20 1 17 15 8 7
genus Cnuella 3
genus Cobetia 1 1
genus Cocleimonas 2
genus Coenonia 4
genus Cognaticolwellia Liu et al. 2020 1
genus Cohaesibacter 1 1
genus Cohnella 486 60 3 3 4 7
genus Coleofasciculus 1
genus Colidextribacter 1 23 9
genus Collimonas 7 32 1 4
genus Collinsella 1277 1061 770 23 32 6 14 9 8 7
genus Colwellia 2 40 1 4
genus Comamonas 143 38 22 1 8 3 1
genus Commensalibacter 3
genus Companilactobacillus 193 155 1 1 1 4
genus Conchiformibius 7 1
genus Conexibacter 6 8
genus Confluentimicrobium 1
genus Congregibacter 5
genus Constrictibacter 2 1
genus Contubernalis 218 5
genus Coprobacillus 1528 624 154 27 5 5 3 6 2 7
genus Coprobacter 712 337 9 9 2 1 5
genus Coprococcus 1568 1252 2 34 31 20 2 17 15 4 7
genus Coprophilus 1
genus Coprothermobacter 14 60 7
genus Coraliomargarita 424 86 1
genus Corallibacter 1
genus Corallococcus 4
genus Coriobacterium 119 41 2 1 3
genus Corticibacter 4
genus Corynebacterium 802 694 445 13 8 2 7 12 8 1
genus Couchioplanes 1 16
genus Coxiella 24 1
genus Crassaminicella 1
genus Craurococcus 2
genus Crenothrix 3
genus Criblamydia 43
genus Crinalium 1 1
genus Croceibacter 9 1
genus Croceibacterium 1
genus Croceicoccus 1
genus Cronobacter 88 83 2 1 6
genus Cruoricaptor 56 1
genus Cryobacterium 2 11 1
genus Cryomorpha 97
genus Cryptanaerobacter 2
genus Cryptobacterium 414 1 1 3 1
genus Cryptococcus 13
genus Cryptosporangium 1
genus Cryptosporidium 1
genus Cucumibacter 2
genus Culturomica 8
genus Cuneatibacter 10
genus Cupidesulfovibrio 2 15
genus Cupriavidus 12 68 1 1 1 4
genus Curtobacterium 13 1 1 1
genus Curvibacter 39 7 6 1 2
genus Cutibacterium 7 12 29 1 1 1
genus Cyanobacterium 246 34 1
genus Cyanobium 4 1 1 1
genus Cyanothece 1
genus Cyclobacterium 66 4
genus Cycloclasticus 16 22 1 1
genus Cyclonatronum 3
genus Cylindrospermum 1
genus Cystobacter 59 46 1
genus Cytobacillus 117 1 1 4
genus Cytophaga 61 2 1
genus Dactylococcopsis 3
genus Dactylosporangium 26 8
genus Dasania 25
genus Dechloromonas 135 9 1
genus Deefgea 1 8
genus Deferribacter 181 40 4 4
genus Deferrisoma 24 1
genus Defluviicoccus 11 1
genus Defluviimonas 3 1
genus Defluviitalea 273 2 3 3
genus Defluviitoga 17 1
genus Dehalobacter 2 245 3 1 4
genus Dehalobacterium 642 2 9 2 7 2 1 3
genus Dehalococcoides 3 64 1 1 1 1
genus Dehalogenimonas 94 167 1 4
genus Deinococcus 739 168 6 1 1 3 4 4
genus Delftia 21 10 64 3
genus Dellaglioa 106 11
genus Demequina 13 73 1
genus Dendrosporobacter 59
genus Denitratisoma 177 11 1
genus Denitrobacter 6
genus Denitrobacterium 1 1 6 1 1
genus Denitrovibrio 3
genus Dependoparvovirus 2
genus Dermabacter 57 70 52 1 1
genus Dermacoccus 12 1 1 1 1
genus Dermatophylus 1
genus Derxia 47
genus Desemzia 2 275
genus Desertibacter 5
genus Deserticella 9
genus Desmospora 8
genus Desulfacinum 77 2
genus Desulfallas 42 3 1
genus Desulfarculus 148 1
genus Desulfatibacillum 5 1 3
genus Desulfatiferula 23
genus Desulfatiglans 18
genus Desulfatirhabdium 2
genus Desulfatitalea 8
genus Desulfitibacter 3 105 1 2 1
genus Desulfitispora 47 2
genus Desulfitobacterium 271 120 1 1 8 3
genus Desulfobacca 1 25 1 1
genus Desulfobacter 97 14 4 3 2
genus Desulfobacterium 1 333 1 1 1
genus Desulfobacula 1 5
genus Desulfobaculum 15
genus Desulfobotulus 7
genus Desulfobulbus 9 111 1 2
genus Desulfocapsa 9 2 1
genus Desulfocarbo 141
genus Desulfocella 334 1 2 6
genus Desulfococcus 7 3 1 6
genus Desulfoconvexum 1
genus Desulfocurvibacter 1 1
genus Desulfocurvus 4
genus Desulfofaba 12 57
genus Desulfofarcimen 45 276 1 4
genus Desulfofrigus 168 49
genus Desulfofundulus 258 111 1
genus Desulfofustis 12
genus Desulfoglaeba 279
genus Desulfohalobium 3 3
genus Desulfohalophilus 1
genus Desulfohalotomaculum 156 863 1 1
genus Desulfohalovibrio 3 89
genus Desulfomicrobium 93 279 1 7 8
genus Desulfomonile 208 15 1 1
genus Desulfonatronobacter 7
genus Desulfonatronovibrio 217 12 2
genus Desulfonatronum 289 46 2
genus Desulfonauticus 80 38 7
genus Desulfonema 37 2
genus Desulfonispora 105
genus Desulfopila 2 1
genus Desulfoplanes 31
genus Desulforegula 81 2
genus Desulforhabdus 1
genus Desulforhopalus 4
genus Desulfosalsimonas 3
genus Desulfosarcina 99 22 1
genus Desulfoscipio Watanabe et al. 2020 10 1 1
genus Desulfosoma 146 2
genus Desulfosporosinus 703 261 1 1 1 6 7 7
genus Desulfotalea 5 1 2
genus Desulfothermus 14
genus Desulfotignum 2
genus Desulfotomaculum 858 1009 2 4 9 2 9 7 7
genus Desulfovibrio 1299 1088 382 7 20 18 6 10 14 8 7
genus Desulfovirga 35
genus Desulfurella 5 6 4
genus Desulfuribacillus 7 1
genus Desulfurispira 3
genus Desulfurispirillum 272 1 1 1
genus Desulfurispora 839 679 2 2 2
genus Desulfurivibrio 4 2
genus Desulfurobacterium 7 1
genus Desulfurococcus 1
genus Desulfuromonas 69 62 2 4
genus Desulfuromusa 737 4 1 3 5
genus Dethiobacter 47 8 1 2 3 1
genus Dethiosulfatibacter 376 2
genus Dethiosulfovibrio 853 119 1 5 6
genus Devosia 494 70 1 2 4
genus Devriesea 1
genus Dialister 1030 1105 475 13 10 10 4 14 9 4 5
genus Diaphorobacter 7 5 1 1
genus Dichelobacter 1 1
genus Dichotomicrobium 11
genus Dickeya 25 55 1 1 4
genus Dictyoglomus 87 2 1
genus Dielma 671 308 15 9 1 7
genus Dientamoeba 1
genus Dietzia 89 165 1 1
genus Dinoroseobacter 1
genus Diplorickettsia 13
genus Discophora 1
genus Dispar 3
genus Dissulfuribacter 10
genus Dokdonella 598 48 1 1 1
genus Dokdonia 25 4
genus Dolichospermum 1039 2 4 1 7
genus Dolosicoccus 11 1
genus Dolosigranulum 252 1
genus Dongia 187 3
genus Dorea 1557 1238 779 35 35 28 16 18 14 7
genus Draconibacterium 34 1
genus Drancourtella 3 3 10
genus Duganella 3 1
genus Duncaniella 1 4
genus Duodenibacillus 7 1 2
genus Dyadobacter 422 76 1 4 4
genus Dyella 8 8 1 1
genus Dysgonomonas 1262 787 10 4 7 2 7 7
genus Dysosmobacter 9 1 3
genus Echinicola 55 1 4
genus Ectobacillus 27 2
genus Ectothiorhodosinus 4
genus Ectothiorhodospira 250 44 1
genus Edaphobacter 174 1
genus Edwardsiella 82 30 1 2
genus Edwardsiella 36 1
genus Effusibacillus 240 5
genus Eggerthella 1170 1049 575 34 24 8 8 8 11 8 6
genus Eggerthia 465 1 1
genus Egibacter 1
genus Egicoccus 1
genus Ehrlichia 400 13 1 1 1 2
genus Eikenella 10 7 5 1 1 2
genus Eilatimonas 2
genus Eionea 1
genus Eisenbergiella 961 518 3 24 5 8 10 6
genus Eisenibacter 162
genus Ekhidna 1
genus Elioraea 3
genus Elizabethkingia 4 21 1 4
genus Elstera 3
genus Elusimicrobium 7 65 7 1 1
genus Emcibacter 169
genus Emergencia 2 1 10
genus Empedobacter 8 1
genus Emticicia 1077 157 2 1 2 5
genus Endobacter 1
genus Endobugula 96
genus Endolissoclinum 1
genus Endomicrobium 1
genus Endozoicomonas 5 1
genus Enhydrobacter 35
genus Enorma 138 68 2 3 1 1
genus Ensifer 4 1 1
genus Enterobacter 685 61 208 6 9 12 1 15 7 8 7
genus Enterocloster 1110 2 31 33 5 6 10 8
genus Enterococcus 1278 256 138 29 27 6 6 9 9 8 4
genus Enterorhabdus 428 263 12 7 7 1
genus Enteroscipio 2
genus Enterovibrio 1
genus Entomomonas 1
genus Entomoplasma 8 23 2 4
genus Epibacterium 1
genus Epilithonimonas 8 3 1
genus Epulopiscium 59 3 1
genus Ercella 318
genus Ereboglobus 3
genus Eremococcus 34 21 1
genus Eremococcus 1 11
genus Erwinia 389 206 1 1 2 11 1 4 2
genus Erysipelatoclostridium 1246 756 31 35 6 13 10 7 7
genus Erysipelothrix 1305 755 3 9 6 3 7
genus Erythrobacter 106 15 1 1 1
genus Erythromicrobium 11
genus Escherichia 1276 64 1 26 11 14 11 1 4 8 6
genus Ethanoligenens 750 1000 4 12 4
genus Eubacterium 1485 1253 151 35 36 19 16 13 12 8 7
genus Eudoraea 54
genus Euryhalocaulis 8
genus Euzebya 908 68 1 1 1
genus Euzebyella 1
genus Evansella 1
genus Evtepia 12 3
genus Exiguobacterium 23 41 1 4 3
genus Exophiala 1
genus Extensimonas 1
genus Extibacter 7
genus Ezakiella 327 3 3 1
genus Fabibacter 6
genus Facklamia 146 939 50 2 1 7
genus Faecalibacterium 1572 1248 772 35 35 25 6 18 5 8 7
genus Faecalibaculum 1 1
genus Faecalicatena 761 21 2
genus Faecalicoccus 726 1 3 3 5
genus Faecalimonas 2
genus Faecalitalea 158 150 20 18 5 4
genus Falcatimonas 1 14 1
genus Fallax 1
genus Falsiporphyromonas 298 2
genus Falsirhodobacter 1
genus Fangia 12
genus Fannyhessea 194 2
genus Fastidiosipila 113 74 1 1 3
genus Fenollaria 626 2 4 6
genus Fermentimonas 1 4
genus Ferrimicrobium 16 2 1
genus Ferrimonas 13 41 1
genus Ferrithrix 209
genus Ferrovibrio 2
genus Ferrovum 2
genus Ferruginibacter 78
genus Fervidicella 11 1
genus Fervidobacterium 16 4 1
genus Fibrella 2 1 3
genus Fibrobacter 116 247 85 2 1
genus Fictibacillus 46 1 4
genus Filifactor 455 415 18 1 1 3
genus Filimonas 4
genus Filomicrobium 2
genus Fimbriimonas 2 44 1
genus Finegoldia 812 886 443 3 5 2 4 9 7 1
genus Fischerella 1
genus Flagellimonas 1 1
genus Flammeovirga 345 32 1 1 4
genus Flaviaesturariibacter 1
genus Flavicella 4
genus Flaviflexus 22 1 3
genus Flavihumibacter 3
genus Flavilitoribacter 7
genus Flavisolibacter 37 1 1 1 1 4
genus Flavitalea 9
genus Flavivirga 1
genus Flavobacterium 68 41 394 5 4 7
genus Flavonifractor 1220 768 34 31 10 1 10 6 7
genus Flectobacillus 85
genus Flexibacter 8 1 2
genus Flexispira Bryner 1987 3
genus Flexistipes 70 1
genus Flexithrix 11
genus Flintibacter 1 25 2 9
genus Fluoribacter 1
genus Fluviicola 17 3 1 1
genus Fluviimonas 491 1
genus Fluviispira 3
genus Fodinibius 5 2
genus Fodinicurvata 458 1 8
genus Fontibacillus 4
genus Fontibacter 35
genus Fonticella 151 2
genus Formosa 2 4
genus Fournierella 1 6 16 1
genus Francisella 70 64 2 2 4 1
genus Franconibacter 11
genus Frankia 2 1 4
genus Frateuria 3 1
genus Frederiksenia 4 1
genus Fretibacter 14
genus Fretibacterium 8 98 1
genus Friedmanniella 25 34 1 1
genus Frigoribacterium 1
genus Frischella 2 1 3
genus Frisingicoccus 8
genus Frondihabitans 1
genus Fructilactobacillus 74 90 1 1 1
genus Fructobacillus 72 35
genus Fuchsiella 22 1
genus Fucophilus 2
genus Fulvibacter 1
genus Fulvimarina 1
genus Fulvitalea 71
genus Fulvivirga 7 93
genus Furfurilactobacillus 639 38 1 1
genus Fuscovulum Suresh et al. 2019 1 3
genus Fusibacter 90 238 3 6 6
genus Fusicatenibacter 1225 760 17 4 15 1
genus Fusobacterium 690 565 121 4 5 8 1 2 4 8 6
genus Gabonia Mourembou et al. 2015 1
genus Gabonibacter 10 1 2
genus Gaetbulibacter 1
genus Gaiella 44 2
genus Galenea 43 2
genus Gallaecimonas 4
genus Gallibacterium 27 70 1 1 1 1
genus Gallicola 76 70 1
genus Gallionella 199 23 2 1
genus Garciella 19 2
genus Gardnerella 81 171 40 1 1 2 1
genus Garicola 2
genus Garritya 2
genus Gelria 5 211 2
genus Gemella 1431 690 153 16 3 5 7 4 6
genus Geminicoccus 75 2
genus Geminisphaera 10
genus Geminocystis 1
genus Gemmata 9 12 1 1
genus Gemmatimonas 8 23 1
genus Gemmatirosa 8 1
genus Gemmiger 1131 12 16 7 9
genus Gemmobacter 2 1 4
genus Geoalkalibacter 13 1
genus Geobacillus 496 66 7 11 1 1 3 1 3
genus Geobacter 95 53 5 4 1
genus Geodermatophilus 5 10 1 2
genus Geofilum 131
genus Geomicrobium 22
genus Geopsychrobacter 6
genus Georgenia 16 34
genus Georhizobium 1
genus Geosporobacter 2 4
genus Geothermobacter 2
genus Geothermomicrobium 2
genus Geothrix 733 498 2 3
genus Geotoga 1
genus Geovibrio 14 1 3
genus Gibbsiella 4
genus Giesbergeria 14 1
genus Gilliamella 1
genus Gillisia 953 28 1 1
genus Gilvimarinus 1
genus Gimesia 2
genus Glaciecola 223 68 3
genus Glaciimonas 2
genus Glaesserella 4 1 1
genus Gleimia 55 43 1
genus Globicatella 20 2 1
genus Gloeobacter 9 1 1 1
genus Gloeothece 1
genus Gloeotrichia 3
genus Glomeribacter 627 2 3
genus Gluconacetobacter 7 8 1
genus Gluconobacter 131 3 1 1
genus Glutamicibacter 128 64 1
genus Glycocaulis 1 1
genus Glycomyces 72 24 1 1
genus Gorbachella 1 1 1
genus Gordonia 66 103 1 1 4
genus Gordonibacter 735 457 25 24 2 3 7 1
genus Gottschalkia 178 4 3 6
genus Gracilibacillus 190 1
genus Gracilibacter 530 3 2 3 6
genus Gracilimonas 330 2 3
genus Gramella 56 2 1 4 6
genus Granulibacter 4
genus Granulicatella 729 158 320 13 2 3 5 5
genus Granulicella 98 17 1
genus Granulosicoccus 82 1
genus Gryllotalpicola 10 1
genus Gudongella 1 1
genus Guggenheimella 430 2 6
genus Guizotia 5
genus Gulbenkiania 5
genus Gullanella 2
genus Gulosibacter 73 11 29 1
genus Guyparkeria 10 1
genus Gynuella 39 1
genus Haematobacter 3
genus Haematospirillum 2
genus Haemophilus 1170 936 528 19 21 5 7 17 5 4 6
genus Hafnia 14 2 2 4 1
genus Hahella 177 209 1 3
genus Halanaerobacter 13 4 4
genus Halanaerobaculum 6
genus Halanaerobium 330 14 1 4 4 2
genus Halarcobacter 9 1 2
genus Halarsenatibacter 76
genus Haliangium 129 25 3
genus Haliea 7
genus Halioglobus 1 1
genus Haliscomenobacter 1 94 3
genus Haloactinopolyspora 2
genus Halobacillus 30 1 4
genus Halobacteriovorax 7 36 1 4
genus Halobacteroides 8 1
genus Halobaculum 2
genus Halocella 13 1 4
genus Halochromatium 85 205 2
genus Halodesulfovibrio 5
genus Haloechinothrix 3
genus Haloferax 1
genus Haloferula 40 2
genus Haloglycomyces 1
genus Halolactibacillus 26
genus Halomicroarcula 1
genus Halomicronema 1 3
genus Halomonas 162 471 1 1 3 1 4 3
genus Halonatronum 5
genus Haloplasma 34 1 2
genus Halopolyspora 159 2
genus Halopseudomonas 8
genus Halorhodospira 43 104 1 1 2
genus Halospina 8
genus Halospirulina 1
genus Halotalea 1
genus Halothermothrix 175 2 5 1
genus Halothiobacillus 17 50 2
genus Haploplasma 62 28 1 2 3 2
genus Harryflintia 4 1
genus Hartmannibacter 1
genus Hathewaya 1543 678 4 3 3 7
genus Hazenella 25
genus Helcococcus 100 195 19
genus Helicobacter 440 38 3 1 2 8 1
genus Heliimonas 10
genus Heliobacterium 1 20 1 3 3 1
genus Heliomicrobium 1 1 1
genus Heliomonas 1 1
genus Heliophilum 22 2
genus Heliorestis 562 10 5 5
genus Heliothrix 1
genus Hellea 9
genus Henriciella 486 4
genus Hepatoplasma 1
genus Hephaestia 2
genus Herbaspirillum 591 68 250 13 2 3 4 3
genus Herbinix 423 6 2 6 4
genus Herminiimonas 51 189 2 4
genus Herpetosiphon 1 5
genus Hespellia 1213 499 15 1 10
genus Heyndrickxia 1 2
genus Hippea 6 1
genus Hirschia 1
genus Histophilus 22 1 1
genus Hoeflea 1
genus Holdemanella 790 646 19 2 2 5 6
genus Holdemania 1332 1048 565 28 23 5 9 14 7
genus Holophaga 11 2
genus Holospora 1
genus Holzapfelia 60
genus Homo 1
genus Hoppeia 1
genus Howardella 880 123 2 2 2
genus Hoyosella 40
genus Hugenholtzia 37 2
genus Humibacter 23
genus Hungateiclostridium 590 561 2 4 1 7 4 6
genus Hungatella 1187 33 32 5 7 10 2 7
genus Hwangdonia 14
genus Hydrocarboniphaga 1129 2 3
genus Hydrocoleum 16 1
genus Hydrogenibacillus 107 4 2 4
genus Hydrogenispora 575
genus Hydrogenoanaerobacterium 1006 224 2
genus Hydrogenobacter 4 1 3
genus Hydrogenobaculum 10 2 2 4 1
genus Hydrogenophaga 43 12 1 1 1 1
genus Hydrogenophilus 675 221 3 1 2
genus Hydrogenothermus 21
genus Hydrogenovibrio 31 26 1
genus Hydrotalea 21
genus Hylemonella 1
genus Hymenobacter 931 54 1 1 4 4
genus Hyphomicrobium 177 20 1 4 4
genus Hyphomonas 80 12 2 3
genus Iamia 5
genus Ianmoorea 3
genus Ichthyobacterium 1
genus Ideonella 2
genus Idiomarina 63 14 1 1
genus Ignatzschineria 1 6
genus Ignavibacterium 37 49 1
genus Ignavigranum 101 2
genus Ihubacter 28 9
genus Ileibacterium 3
genus Ilumatobacter 122
genus Ilyobacter 4
genus Immundisolibacter 3
genus Imperialibacter 18
genus Imtechella 1 1
genus Indibacter 27
genus Indioceanicola 3
genus Inquilinus 6 18
genus Insolitispirillum 902 241 7
genus Intestinibacillus 8 8
genus Intestinibacter 999 770 24 19 3 9
genus Intestinibaculum Kim et al. 2019 1 4
genus Intestinimonas 1193 721 30 34 6 1 10 5
genus Intrasporangium 2
genus Iodobacter 7 3
genus Ishikawaella 1
genus Isochromatium 6
genus Izimaplasma 1
genus Jahnia Reichenbach 2005 1
genus Janibacter 2 1
genus Jannaschia 4 1 1
genus Janthinobacterium 51 6 4 3
genus Jatrophihabitans 6 1
genus Jeotgalibaca 1 3
genus Jeotgalibacillus 12 1 1
genus Jeotgalicoccus 16 89 1 1
genus Jiangella 23 2 4 1
genus Jinshanibacter 3
genus Johnsonella 1512 873 10 14 1 2 7
genus Jonesia 38 115
genus Jonquetella 128 10 1
genus Kaistella 1 3
genus Kaistia 10 42 1
genus Kallipyga 76 1 1
genus Kallotenue 20
genus Kandleria 187 2
genus Kangiella 37 1
genus Kastovskya 2
genus Keratinibaculum 12
genus Ketobacter 1
genus Ketogulonicigenium 3 1
genus Kiloniella 52 3 2
genus Kineococcus 4 13 1
genus Kineosporia 9 1
genus Kinetoplastibacterium 4
genus Kingella 14 4 2 1
genus Kistimonas 1
genus Kitasatospora 38 12 1 4 5
genus Klebsiella 490 77 144 13 7 8 16 12 13 8 5
genus Kluyvera 23 537 4 1 7
genus Knoellia 1
genus Kocuria 53 30 6 1 1 1 7
genus Kofleria 2
genus Komagataeibacter 47 1 3
genus Komvophoron 1
genus Kordia 1 1
genus Kordiimonas 2
genus Koribacter 4 1
genus Kosakonia 47 301 4 3
genus Kosmotoga 12 12 1
genus Kozakia 1 3
genus Kribbella 83 349 5
genus Kroppenstedtia 3 1 2
genus Ktedonobacter 1
genus Kurthia 1 3
genus Kushneria 368 6 1 1 2
genus Kutzneria 1
genus Kyrpidia 139 1
genus Kytococcus 1 2 1
genus Labilibacter 4
genus Labilibaculum 1 4
genus Labilithrix 39
genus Labrenzia 1 1
genus Labrys 5 6
genus Laceyella 32 5 1
genus Lachnoanaerobaculum 1222 12 5 2 7 4
genus Lachnobacterium 1431 874 12 1 28 6 8 13 4
genus Lachnoclostridium 1250 2 33 36 14 16 10 8 3
genus Lachnospira 1572 1245 713 35 35 15 13 18 15 8 7
genus Lachnotalea 8 3
genus Lacibacter 3 3
genus Lacibacterium 139
genus Lacihabitans 7
genus Lacimicrobium 1
genus Lacinutrix 1 4
genus Lacrimispora 431 1 19 32 2 1 2 8
genus Lacticaseibacillus 360 71 141 9 3 2 4 1 6 3
genus Lactiplantibacillus 203 20 65 11 1 4 1 5 4
genus Lactivibrio 2
genus Lactobacillus 1459 1244 813 31 36 19 12 18 15 8 7
genus Lactococcus 1063 788 260 10 9 6 1 7 12 8 3
genus Lactonifactor 838 477 1 27 4 10 7
genus Lactovum 301
genus Lacunisphaera 3
genus Lagierella 1
genus Lamprocystis 4
genus Lancefieldella 91 103 4 2 1 2 3 1
genus Lapidilactobacillus 4
genus Laribacter 5 3
genus Larkinella 1
genus Larsenimonas 1
genus Lascolabacillus 1
genus Latilactobacillus 13 33 4 1 1 5
genus Lautropia 110 48 8 1 1
genus Lawsonella 1
genus Lawsonia 6 646 1 1 3
genus Lawsonibacter 11 1
genus Leadbetterella 17 3
genus Lebetimonas 26
genus Leclercia 1 1
genus Legionella 1027 71 1 1 7 4 3
genus Leifsonia 1 1 1 1
genus Leisingera 1
genus Lelliottia 496 2 1 4 2
genus Leminorella 4 1
genus Lentibacillus 244 60 1
genus Lentilactobacillus 80 3 14 2 1 5 1
genus Lentisphaera 4
genus Lentzea 2 1 1
genus Leptofauchea 10
genus Leptolinea 118 2
genus Leptolyngbya 343 1 1 1 4 2
genus Leptonema 25 2
genus Leptospira 399 33 2 4
genus Leptospirillum 17 1
genus Leptothrix 229 7 2 1
genus Leptotrichia 75 67 29 2 1 4
genus Leucobacter 21 45 1 1
genus Leuconostoc 711 874 78 7 3 2 2 12 5 6
genus Leucothrix 14 5 1
genus Levilactobacillus 85 48 5 1 1 3 1
genus Levilinea 1
genus Levyella 432 2
genus Lewinella 72 8
genus Libanicoccus 1
genus Liberibacter 70 2 6 1 7
genus Lichenihabitans 1
genus Ligilactobacillus 192 171 65 7 1 2 8 1
genus Limibacillus 21
genus Limibacter 1
genus Limimaricola 2
genus Limimonas 5
genus Limisphaera 27 2
genus Limnobacter 1145 32 1 1 2 1
genus Limnobaculum 1
genus Limnochorda 1 1
genus Limnohabitans 18 3 2
genus Limnoraphis 3
genus Limnospira 2
genus Limosa 3
genus Limosilactobacillus 245 340 75 6 2 2 2 1 7 1
genus Liquorilactobacillus 183 1
genus Lishizhenia 2
genus Listeria 357 268 1 1 1 4 2 4
genus Litoribacillus 69
genus Litoribacter 36
genus Litoribrevibacter 12
genus Litoricola 101 39 1 3
genus Litorilinea 12 2 2
genus Litorilituus 89 1 4
genus Litorimonas 1
genus Loigolactobacillus 11 1 1
genus Loktanella 2 8
genus Longibaculum 6 1 3
genus Longicatena 2 4
genus Longilinea 7 3
genus Longimonas 76
genus Lonsdalea 8
genus