Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank Bacteria BiomeSight
1302 Samples
Thryve
1079 Samples
uBiome
814 Samples
SequentiaBiotech
36 Samples
CosmosId
33 Samples
custom
23 Samples
AmericanGut
18 Samples
Microba
16 Samples
BiomeSightRdp
11 Samples
Medivere
7 Samples
es-xenogene
4 Samples
biotype Haemophilus influenzae aegyptius 1
biotype Mycobacterium tuberculosis variant caprae 1
biotype Mycobacterium tuberculosis variant pinnipedii 118
clade 1
clade 50 kb inversion clade 354 11 2 3 1
clade Amniota 1
clade ant endosymbionts 327 6 4
clade ant, tsetse, mealybug, aphid, etc. endosymbionts 336 1 6 4
clade aphid secondary symbionts 17 1
clade asterids 18
clade Bacteria candidate phyla 199 5 1 3
clade Bacteroidetes/Chlorobi group 1295 1066 790 36 32 22 18 15 11 7 4
clade Bilateria 254 8 11 1 1 1 1 4
clade Boreoeutheria 1
clade Caldiserica/Cryosericota group 1 5 1
clade Candidatus Baumannia 1
clade Candidatus Dependentiae 3
clade Candidatus Uzinura 1
clade core chlorophytes 1
clade core genistoids 355 11 2 3 1
clade Cyanobacteria/Melainabacteria group 1214 732 31 18 8 7 5 7 4
clade Deuterostomia 5 1 1
clade Dicondylia 142 7 11 1 1 1 4
clade Dipnotetrapodomorpha 5 1 1
clade dothideomyceta 1
clade Ecdysozoa 142 7 11 1 1 1 4
clade Embryophyta 356 11 18 2 3 1
clade eudicotyledons 356 11 18 2 3 1
clade Eumetazoa 281 8 11 1 1 1 1 4
clade Euphyllophyta 356 11 18 2 3 1
clade Euteleostomi 5 1 1
clade Eutheria 1
clade fabids 354 11 2 3 1
clade FCB group 1295 1066 790 36 32 22 18 16 11 7 4
clade genistoids sensu lato 354 11 2 3 1
clade Gnathostomata 5 1 1
clade Gunneridae 356 11 18 2 3 1
clade lamiids 18
clade leotiomyceta 1 1
clade lice endosymbionts 1
clade Lophotrochozoa 244 1 1
clade Luna-1 subcluster 2 1 3
clade Mandibulata 142 7 11 1 1 1 4
clade mealybug secondary endosymbionts 1
clade Mesangiospermae 356 11 18 2 3 1
clade Metamonada 1
clade Methanomada group 356 226 220 16 3 4 11 7 7
clade Nitrospinae/Tectomicrobia group 4 5
clade OM182 clade 1
clade OMG group 1
clade Opisthokonta 281 8 11 1 4 13 1 6 4
clade Panarthropoda 142 7 11 1 1 1 4
clade Pancrustacea 142 7 11 1 1 1 4
clade Patescibacteria group 1
clade Pentapetalae 356 11 18 2 3 1
clade Protostomia 249 8 11 1 1 1 4
clade PVC group 1195 977 567 29 16 16 14 7 11 5 4
clade Rhizaria 2 2
clade rosids 354 11 2 3 1
clade saccharomyceta 4 6
clade Sar 2 2 2
clade SAR116 cluster 1
clade sordariomyceta 1
clade Spermatophyta 356 11 18 2 3 1
clade Spiralia 244 1 1
clade Stenosarchaea group 13 8 10 1
clade Stramenopiles 2
clade sulfur-oxidizing symbionts 1 1
clade TACK group 13 5 1
clade Teleostomi 5 1 1
clade Terrabacteria group 1295 1066 792 36 32 22 18 16 11 7 4
clade Tetrapoda 5 1 1
clade Theria 1
clade Tracheophyta 356 11 18 2 3 1
clade Vertebrata 5 1 1
class 1
class 1
class Acidimicrobiia 158 342 2 3 3 1
class Acidithiobacillia 36 1 1
class Acidobacteriia 222 651 111 2 2 2 4
class Actinomycetia 1285 1068 785 35 32 19 17 13 11 7 4
class Agaricomycetes 1
class algae 2 2
class Alphaproteobacteria 1263 1040 437 32 4 8 7 9 11 7 4
class Amphibia 5 1
class Anaerolineae 538 225 9 1 5 7 4
class Anthozoa 36 1
class Aquificae 8 52 3 4 4
class Archaeoglobi 1
class Ardenticatenia 16 3 1
class Armatimonadia 1
class Bacilli 1298 1105 786 36 31 19 18 14 11 7 4
class Bacteroidia 1298 1105 790 36 32 22 18 15 11 7 4
class Balneolia 57 553 7 2 3
class Betaproteobacteria 1295 1097 747 36 30 18 18 12 11 7 4
class Bivalvia 177 1
class Blastocatellia 123 1 1 3
class Caldilineae 418 288 2 5 7 3
class Caldisericia 1 5 1
class Calditrichia 249 10 7 1
class Candidatus Babeliae 3
class Candidatus Brocadiia 11 1
class Chitinispirillia 13 2
class Chitinivibrionia 2
class Chitinophagia 603 843 5 5 1 1 8 6 4
class Chlamydiia 119 120 1 1 1 1
class Chlorobia 1055 78 1 1 1 2 4
class Chloroflexia 2 55 2 14 1 1
class Chlorophyceae 1
class Chrysiogenetes 224 15 1 1 1
class Chthonomonadetes 5 100 3
class Clostridia 1298 1105 792 36 32 22 18 15 11 7 4
class Conoidasida 1
class Coprothermobacteria 10 48 7
class Coriobacteriia 1284 1099 786 36 32 13 18 11 11 7 4
class Cytophagia 1248 932 7 12 4 8 6 4
class Deferribacteres 312 92 1 1 1 4 4
class Dehalococcoidia 87 214 1 1 1 2 4
class Deinococci 815 224 7 13 1 6 7 4
class Deltaproteobacteria 1282 1057 646 33 19 17 14 12 11 7 4
class Dictyoglomia 74 2 1
class Dothideomycetes 1
class Elusimicrobia 7 79 7 19 3 5 7 1
class Endomicrobia 1
class Epsilonproteobacteria 709 502 266 10 3 2 7 8 7 4
class Erysipelotrichia 1295 1104 785 36 31 14 17 9 11 7 4
class Eurotiomycetes 1 1
class Fibrobacteria 102 251 186 2 1
class Fimbriimonadia 2 25 1
class Flavobacteriia 1138 571 458 12 3 7 2 4 7 4
class Florideophyceae 10
class Fusobacteriia 666 639 144 7 4 2 2 5 6 4
class Gammaproteobacteria 1295 1103 720 36 30 12 18 13 11 7 4
class Gastropoda 91 1 1
class Gemmatimonadetes 8 47 1 15 1 4 7 1
class Gloeobacteria 9 1 1 1
class Halobacteria 3 1 1
class Holophagae 599 568 2 6
class Hydrogenophilalia 640 237 6 1 1 1
class Ignavibacteria 36 708 2 16 2 6 4
class Insecta 142 7 11 1 1 1 4
class Ktedonobacteria 108 13 1 3
class Lentisphaeria 279 283 6 2 3 5 1 6 1
class Limnochordia 1 1
class Magnoliopsida 356 11 18 2 3 1
class Mammalia 1
class Methanobacteria 356 230 220 16 3 4 11 7 7
class Methanococci 1
class Methanomicrobia 10 7 10 1
class Methylacidiphilae 12 1 1
class Mollicutes 1248 965 167 25 1 5 2 10 6 4
class Negativicutes 1291 1105 792 34 32 20 17 14 11 7 4
class Nitriliruptoria 718 48 3 1 1
class Nitrososphaeria 6 1
class Nitrospinia 4 5
class Nitrospira 229 48 1 1 6 4
class Oligoflexia 22 85 1 1 1 1 1 4
class Oligosphaeria 39 1
class Opitutae 776 396 96 1 1 2 4 4 4
class Phycisphaerae 2 1 4
class Pisoniviricetes 1
class Planctomycetia 14 104 1 1 4
class Rhodothermia 84 23 1
class Rubrobacteria 9 100 3 2 3
class Saccharomycetes 4 6
class Saprospiria 59 148 4
class Solibacteres 31 1
class Sordariomycetes 1
class Spartobacteria 22 52
class Sphingobacteriia 1298 606 18 26 5 4 9 7 4
class Spirochaetia 561 177 16 4 5 1 4
class Synergistia 966 407 236 1 1 3 1 7 7 4
class Thermoanaerobaculia 77
class Thermococci 3 1 1
class Thermodesulfobacteria 124 23 1 2 1
class Thermodesulfovibrionia Umezawa et al. 2021 83 2
class Thermoflexia 4
class Thermoleophilia 19 84 1
class Thermolithobacteria 50
class Thermomicrobia 16 2 1
class Thermoplasmata 33 36 1
class Thermoprotei 7
class Thermotogae 43 22 1 6 4
class Tissierellia 1282 1057 512 14 10 5 8 11 7 4
class Tremellomycetes 1 13
class unclassified Cyanobacteria 1
class Verrucomicrobiae 1117 972 492 26 15 14 13 7 11 3 4
class Vicinamibacteria 1
class Zetaproteobacteria 30 1 1 1
cohort Endopterygota 3
cohort Paraneoptera 137 2 11 1 1
cohort Polyneoptera 7 7 1 1
family 1
family 'Williamsiaceae' 2
family Acanthopleuribacteraceae 57
family Acaryochloridaceae 3
family Acetobacteraceae 415 321 2 1 1 1 1 3 4
family Acholeplasmataceae 1173 700 19 15 2 6 6 4
family Acidaminococcaceae 1187 1015 565 22 21 10 13 10 7 7 4
family Acidiferrobacteraceae 16 4
family Acidimicrobiaceae 158 330 2 3 1
family Acidithiobacillaceae 36 1 1
family Acidobacteriaceae 221 163 87 1 2 2 4
family Acidothermaceae 46 1
family Actinomycetaceae 1032 962 634 24 27 6 8 1 11 7 4
family Actinopolymorphaceae 75 1 1
family Actinopolysporaceae 250 180 4 1
family Aerococcaceae 541 898 80 2 3 1 9 7 4
family Aeromonadaceae 289 214 7 4 1 1 3 1 2 4
family Akkermansiaceae 1146 1035 811 36 28 16 18 14 10 4 4
family Alcaligenaceae 1281 199 6 10 3 1 2 7 4
family Alcanivoracaceae 149 20 1 1
family Algiphilaceae 41
family Alicyclobacillaceae 2 356 7 3 6 4
family Alsobacteraceae 2
family Alteromonadaceae 427 444 1 2 1 1 4
family Amaranthaceae 3
family Amoebophilaceae 1147 3 1 5 1
family Anaerolineaceae 213 224 8 1 5 4
family Anaeromyxobacteraceae 1 606 1 1 1
family Anaeroplasmataceae 126 388 128 3 1 2 4 2
family anamorphic Herpotrichiellaceae 1
family Anaplasmataceae 330 21 1 1 2 2 4
family Aphanizomenonaceae 860 3 7 4
family Aphanothecaceae 3 1 1
family Aphididae 2 1
family Aquificaceae 8 19 2 4 3
family Archaeoglobaceae 1
family Archangiaceae 41 81 1 1
family Arcobacteraceae Waite et al. 2017 76 20 1 1 1 4
family Ardenticatenaceae 16 3 1
family Armatimonadaceae 1
family Aspergillaceae 1 1
family Atopobiaceae 476 677 165 10 4 1 7 3 4
family Aurantimonadaceae 14 16 1 1
family Azonexaceae 112 23 1 1
family Azospirillaceae 654 506 1 2 1 3 7 2 4
family Babyloniidae 1
family Bacillaceae 1191 818 232 31 3 5 12 10 7 4
family Bacillales Family X. Incertae Sedis 1291 531 3 5 7
family Bacillidae 7 6 1 1
family bacterial virus 1
family Bacteriovoracaceae 8 41 1 1 1
family Bacteroidaceae 1298 1105 784 35 32 22 18 15 11 7 4
family Balneatrichaceae 13
family Balneicellaceae 9
family Balneolaceae 58 549 1 2 3
family Barnesiellaceae 934 513 11 16 8 18 6 9 4
family Bartonellaceae 37 11 1 4
family Bdellovibrionaceae 14 10 1 1 1 1
family Beijerinckiaceae 40 9 4
family Bernardetiaceae 110 2 1
family Beutenbergiaceae 1
family Bifidobacteriaceae 1286 1105 812 36 31 20 18 15 11 7 4
family Blastocatellaceae 18 1 1
family Blastochloridaceae 5 1
family Blastocystidae 2
family Blattabacteriaceae 1 4
family Bogoriellaceae 9 42 2
family Borreliaceae 17 2 1 4
family Boseaceae 7 1 1 4
family Brachyspiraceae 23 13 1 4
family Bradymonadaceae 1
family Bradyrhizobiaceae 45 56 11 1 1 1 1 4
family Breoghaniaceae 1
family Brevibacteriaceae 96 101 60 1 1 7 4
family Brevinemataceae 5 1
family Brucellaceae 118 40 25 4 1 1 2 4
family Bruguierivoracaceae Li et al. 2021 5 26 1 4
family Bryobacteraceae 19 1
family Budviciaceae 267 1 10 1 4
family Burkholderiaceae 1154 362 27 17 3 3 1 9 7 4
family Caedimonadaceae 1
family Caldicoprobacteraceae 36 236
family Caldilineaceae 420 286 2 5 7 3
family Caldisericaceae 5 1
family Calditrichaceae 249 10 7 1
family Caliciviridae 1
family Calotrichaceae 522 99 1 6 4
family Campylobacteraceae 524 419 265 7 3 2 7 6 7 4
family Candidatus Babeliaceae 3
family Candidatus Brocadiaceae 11 1
family Candidatus Competibacteraceae 160 2 1
family Candidatus Desulfofervidaceae 1
family Candidatus Methanomethylophilaceae 23
family Candidatus Midichloriaceae 1 1
family Candidatus Nanopelagicaceae 1 3
family Candidatus Paracaedibacteraceae 1
family Candidatus Scalinduaceae Lodha et al. 2021 11
family Cardiobacteriaceae 28 153 2 1 1
family Carnobacteriaceae 821 631 325 5 13 5 3 1 8 7 4
family Catabacteriaceae 149 99 1 1 1 8 6
family Catalimonadaceae 44
family Catenulisporaceae 3 4
family Caulobacteraceae 597 148 9 1 4 4 1 4
family Celerinatantimonadaceae 6
family Cellulomonadaceae 77 87 4 1 4
family Cellvibrionaceae 92 78 1 4
family Cenarchaeaceae DeLong and Preston 1996 2
family Cesiribacteraceae 44
family Chamaesiphonaceae 5 3
family Chelatococcaceae 4 3 1
family Chitinispirillaceae 13 2
family Chitinivibrionaceae 2
family Chitinophagaceae 610 843 5 5 1 1 8 6 4
family Chlamydiaceae 1 2 1 1
family Chlorobiaceae 1055 78 1 1 2 4
family Chloroflexaceae 2 2 1
family Chlorogloeopsidaceae 10
family Christensenellaceae 245 180 24 26 3 14 10 7 4
family Chromatiaceae 1053 533 2 1 3 3 6 4
family Chromobacteriaceae 179 102 1 1 4
family Chroococcaceae 529 2 2 1
family Chroococcidiopsidaceae 1 1 1
family Chrysiogenaceae 228 15 1 1 1
family Chthoniobacteraceae 22 12
family Chthonomonadaceae 5 100 3
family Clostridiaceae 1297 1105 788 36 32 20 17 13 11 7 4
family Clostridiales Family XI. Incertae Sedis 217
family Clostridiales Family XVI. Incertae Sedis 722 31 4 3 2 1
family Clostridiales Family XVII. Incertae Sedis 51 106 1 1 7 2 4
family Coccidae 109 3
family Coelosphaeriaceae 30
family Cohaesibacteraceae 1 1
family Coleofasciculaceae 9 3
family Colwelliaceae 2 169 1 2 4
family Comamonadaceae 1146 217 111 3 2 9 4 6 4
family Conexibacteraceae 6 8
family Coprobacillaceae Verbarg et al. 2014 1280 839 393 5 28 5 11 4 7
family Coprothermobacteraceae 10 48 7
family Coriobacteriaceae 1290 976 781 34 24 7 18 10 7 4
family Corynebacteriaceae 643 628 445 8 13 2 7 1 9 1 4
family Coxiellaceae 33 42 2 1 1 1
family Crenotrichaceae 2
family Criblamydiaceae 43
family Crocinitomicaceae 28 3 1 1
family Cryomorphaceae 93 1 1
family Cryptococcaceae 13
family Cryptosporangiaceae 1
family Cryptosporidiidae 1
family Cyanobacteriaceae 199 31 1
family Cyanobacteriaceae 200 31 1
family Cyanobiaceae Salazar et al., 2020 3 5 1 1 4
family Cyanothecaceae 1
family Cyclobacteriaceae 292 1 4
family Cytophagaceae 1183 743 3 4 1 5 6 4
family Debaryomycetaceae 1
family Deferribacteraceae 314 105 1 1 1 4 4
family Defluviitaleaceae 265 18 3 3 9
family Dehalococcoidaceae 87 57 1 1 1 1
family Deinococcaceae 610 146 6 1 1 1 4 4
family Demequinaceae 5 56 1
family Dermabacteraceae 211 78 55 1 1 4
family Dermacoccaceae 10 30 2 1 1 1 1
family Dermatophilaceae 1 9 1
family Dermocarpellaceae 1
family Desulfallaceae Watanabe et al. 2020 551 209 3 1 7 1
family Desulfarculaceae 232 1
family Desulfobacteraceae 301 636 2 2 7 7 2 4
family Desulfobulbaceae 18 105 1 1 1
family Desulfocapsaceae 11 15 1 1
family Desulfohalobiaceae 240 58 7 3
family Desulfomicrobiaceae 84 266 1 7 4
family Desulfonatronaceae 260 43 2
family Desulfovibrionaceae 1244 962 646 32 19 13 14 12 11 7 4
family Desulfurellaceae 5 9 1
family Desulfurobacteriaceae 8 1
family Desulfurococcaceae 1
family Desulfuromonadaceae 636 107 3 5 4
family Devosiaceae 406 66 1 4
family Diapheromeridae 1
family Dictyoglomaceae 74 2 1
family Dientamoebidae 1
family Dietziaceae 68 142 2 1 1
family Dysgonomonadaceae 1034 691 46 4 7 2 7 7 4
family Ectothiorhodospiraceae 860 242 1 3 7 2 4
family Edwardsiidae 36 1
family Eggerthellaceae 1271 1073 774 35 32 13 14 11 11 7 4
family Egibacteraceae 1
family Egicoccaceae 1
family Elioraeaceae 3
family Elusimicrobiaceae 7 60 7 3 1 1
family Emcibacteraceae 122
family Endomicrobiaceae 1
family Endozoicomonadaceae 6 1
family Enterobacteriaceae 1246 673 593 32 28 10 17 13 11 7 4
family Enterococcaceae 1186 354 140 28 27 7 11 5 7 4 4
family Entomoplasmataceae 579 76 1 3 2 4
family Eriococcidae 1 11
family Erwiniaceae 318 357 176 4 2 11 1 2 4
family Erysipelotrichaceae 1295 1104 785 36 31 13 17 9 11 7 4
family Erythrobacteraceae 101 48 2 1 1 4
family Eubacteriaceae 1291 1105 299 36 32 13 13 12 11 7 4
family Eubacteriales Family XII. Incertae Sedis 357 582 18 6 8 6
family Eubacteriales Family XIII. Incertae Sedis 1080 1020 656 31 17 4 12 1 11 7 4
family Euzebyaceae 717 42 1 1 1
family Fabaceae 354 11 2 3 1
family Fastidiosibacteraceae 15
family Faucheaceae 10
family Ferrimonadaceae 12 42 1
family Ferrovaceae 2
family Fervidobacteriaceae 14 1 1 1 4
family Fibrobacteraceae 102 239 140 2 1
family Fimbriimonadaceae 2 25 1
family Flammeovirgaceae 288 373 1 3 1 4
family Flavobacteriaceae 1138 508 455 3 1 7 2 4 7 4
family Flexibacteraceae 8 1 2
family Fortieaceae 15
family Francisellaceae 53 76 2 2 1 4
family Frankiaceae 2 6 1 4
family Fulvivirgaceae 6 152 2 1 4
family Fusobacteriaceae 603 545 121 7 4 1 2 4 6 4
family Gaiellaceae 40 2
family Gallionellaceae 158 29 1 2 1
family Geminicoccaceae 40 2
family Gemmataceae 7 15 1 1 1
family Gemmatimonadaceae 8 31 1 1 1
family Geobacteraceae 78 68 5 1 4
family Geodermatophilaceae 12 103 1 1 4
family Gloeobacteraceae 9 1 1 1
family Gloeotrichiaceae 3
family Glycomycetaceae 60 134 1 1 1
family Gomontiellaceae 93 2 1
family Gomphosphaeriaceae 31
family Gordoniaceae 44 67 1 1 4
family Gottschalkiaceae 135 4 3 4
family Gracilibacteraceae 464 9 3 3 7
family Granulosicoccaceae 78 1
family great apes 1
family Hafniaceae 73 52 14 2 4 1 1
family Hahellaceae 149 198 2 1 3
family Halanaerobiaceae 256 233 1 3 6 2 4
family Halieaceae 63 1 1
family Haliscomenobacteraceae 82 3
family Haloarculaceae 1
family Halobacteriaceae 3 1 1
family Halobacteriaceae Clade I 1
family Halobacteriovoraceae 7 34 1 4
family Halobacteroidaceae 41 374 3 3 4 1
family Haloferacaceae 1 1
family Halomonadaceae 459 472 2 1 4 1 3 4
family Haloplasmataceae 34 1 2
family Halorubraceae 2
family Halothiobacillaceae 17 102 2
family Hapalosiphonaceae 1
family Helicobacteraceae 369 44 3 1 1 1 4
family Heliobacteriaceae 567 196 4 2 3 6 5 1
family Herpetosiphonaceae 1 5
family Heteroleibleiniaceae 13
family Holophagaceae 599 524 2 5
family Holosporaceae 1 3
family Hungateiclostridiaceae 592 726 142 35 7 2 6 8 6 4
family Hydrogenophilaceae 644 244 5 1 1 1
family Hydrogenothermaceae 25 1 1
family Hyellaceae 1
family Hymenobacteraceae 871 204 2 1 5 1 4
family Hyphomicrobiaceae 583 109 1 1 1 5 4
family Hyphomonadaceae 75 570 1 1 5 3 2
family Iamiaceae 21
family Ichthyobacteriaceae 1
family Idiomarinaceae 48 27 1 1 1
family Ignavibacteriaceae 36 41 1 1
family Ilumatobacteraceae 81
family Immundisolibacteraceae 3
family Intrasporangiaceae 47 66 1 4
family Isosphaeraceae 6 5 1 4
family Jatrophihabitantaceae 6 1
family Jiangellaceae 16 8 1 4
family Jonesiaceae 24 100
family Kaistiaceae 10 36 1
family Kallotenuaceae 15
family Kangiellaceae 36 1
family Kiloniellaceae 293 468 5 2
family Kineosporiaceae 14 52 1 1
family Kofleriaceae 111 26 3
family Kordiimonadaceae 141
family Kosmotogaceae 10 1 1 1
family Kribbellaceae 67 278 5
family Ktedonobacteraceae 1
family Kytococcaceae 1 2 1
family Labilitrichaceae 36
family Lachnospiraceae 1298 1105 791 36 32 22 18 15 11 7 4
family Lacipirellulaceae 6
family Lactobacillaceae 1265 1105 813 36 29 12 18 12 11 7 4
family Lawsonellaceae 1
family Legionellaceae 833 70 1 1 4 3 4
family Lentisphaeraceae 4
family Leptolyngbyaceae 295 3 1 1 2 4
family Leptospiraceae 347 53 4 2 4
family Leptotrichiaceae 157 205 38 2 1 1 4
family Leuconostocaceae 1010 1001 102 9 3 1 2 5 8 6 4
family Lewinellaceae 58 8
family Limnochordaceae 1 1
family Listeriaceae 862 246 1 1 1 4 3 1 4
family Litoricolaceae 79 38 3
family Luteibaculaceae Bowman 2020 1
family Magnetococcaceae 18 1 1
family Maricaulaceae 9 32 1
family Marinifilaceae 284 1 4 4
family Marinilabiliaceae 556 1 7 6 1
family Marinobacteraceae Liao et al. 2020 68 157 1 1 4
family Mariprofundaceae 30 1 1 1
family Marivirgaceae 2 2 1
family Melioribacteraceae 700 16 2 6 4
family Merismopediaceae 3
family Mesoaciditogaceae 5
family Methanobacteriaceae 356 225 220 3 3 4 11 6 1
family Methanococcaceae 1
family Methanocorpusculaceae 4 1 1
family Methanomassiliicoccaceae 33 31 1
family Methanoregulaceae 2
family Methanosarcinaceae 7 3 1
family Methanotrichaceae 1
family Methylacidiphilaceae 12 1 1
family Methylobacteriaceae 69 56 4 1 4
family Methylococcaceae 6 188 1 3 4
family Methylocystaceae 18 21 1 4
family Methylophilaceae 555 271 1 1 2 1
family Methylothermaceae 48
family Microbacteriaceae 404 601 49 2 3 4 5 4
family Microbulbiferaceae 7 1 1 4
family Micrococcaceae 490 563 151 25 21 5 1 4 6 4
family Microcoleaceae 286 308 1 1 1 4
family Microcystaceae 6 2 1
family Micromonosporaceae 375 234 1 1 1 2 6 4
family Micropepsaceae 12
family Microscillaceae 138 1
family Microviridae 7
family Mooreiaceae 10
family Moraxellaceae 644 525 21 7 3 1 5 3 7 6 4
family Morganellaceae 188 492 17 17 1 2 10 1 10 7 4
family Moritellaceae 1 1 1
family Motilibacteraceae 6
family Muribaculaceae 2 1 4
family Mycobacteriaceae 201 99 59 2 1 2 1 4
family Mycoplasmataceae 1070 765 11 6 2 7 5 4
family Mycoplasmoidaceae 23
family Myoviridae 1
family Myxococcaceae 1 4 1 4
family Mzabimycetaceae 143
family Nakamurellaceae 2 1 4
family Nannocystaceae 86 25 1
family Natranaerobiaceae 31 1
family Nautiliaceae 3 31 1 2 1
family Neisseriaceae 413 195 68 10 5 2 3 1 4 7 4
family Neomegalonemataceae 22 1
family Nitratiruptoraceae Waite et al. 2017 1 1
family Nitriliruptoraceae 5 6 2
family Nitrosomonadaceae 10 334 8 4 3 3 4
family Nitrosopumilaceae 1 4 1
family Nitrososphaeraceae 6 1
family Nitrospinaceae 4 5
family Nitrospiraceae 229 48 1 1 5 4
family Nocardiaceae 121 11 21 1 2 1 4
family Nocardioidaceae 175 396 1 2 6 4
family Nocardiopsaceae 304 1 2 1 4
family Nostocaceae 1102 5 2 1 1 7 4
family Oceanospirillaceae 327 277 1 1 4
family Odoribacteraceae 1211 1019 619 33 24 14 16 12 10 7 4
family Oleiphilaceae 3
family Oligoflexaceae 1
family Oligosphaeraceae 39
family Opitutaceae 7 47 1 1 1 4
family Orbaceae 5 1 4
family Ornithinimicrobiaceae 28 20 1 4
family Oscillatoriaceae 598 120 4
family Oscillospiraceae 1292 1105 788 36 32 22 18 15 11 7 4
family Oxalobacteraceae 827 487 258 25 2 3 8 7 7 4
family Paenibacillaceae 1028 935 1 29 4 6 6 7 4
family Paludibacteraceae 5 137 1 3 2 2 1 4
family Parachlamydiaceae 2 3 1
family Parvibaculaceae 2 4
family Parvoviridae 2
family Parvularculaceae 31 1
family Pasteurellaceae 1050 889 548 29 16 6 17 5 7 7 4
family Pasteuriaceae 51
family Patulibacteraceae 1 3
family Pectobacteriaceae 65 432 2 1 1 1 3 4
family Pelagibacteraceae 4 1 1
family Peptococcaceae 1278 1022 520 24 4 6 9 10 7 4
family Peptoniphilaceae 1258 1026 505 7 9 4 8 11 7 4
family Peptostreptococcaceae 1151 1100 789 30 31 11 15 6 11 7 4
family Perlucidibacaceae Liao et al. 2020 3
family Persicobacteraceae 1 75 1 4
family Petrotogaceae 16 9 1 6 4
family phages with long non-contractile tails 1
family Phreatobacteraceae 1 1
family Phycisphaeraceae 2 1
family Phyllobacteriaceae 17 37 35 1 1 4
family Pirellulaceae Dedysh et al. 2020 3 38 1
family Piscirickettsiaceae 169 295 2 3 1 4
family Planctomycetaceae 7 97 1 1
family Planococcaceae 635 900 39 22 2 6 11 7 4
family Pleioneaceae 2
family Pleomorphomonadaceae 5 7 1
family Polyangiaceae 51 3 1 1 4
family Porphyromonadaceae 1293 1093 524 35 22 6 10 1 11 7 4
family Porticoccaceae 1
family Prevotellaceae 1273 1098 568 21 13 20 17 11 7 4
family Prochloraceae 2 2 1 4
family Prochlorococcaceae 1
family Prochlorotrichaceae 3 3
family Prolixibacteraceae 143 1 4 1
family Promicromonosporaceae 3 50 1 1 4
family Propionibacteriaceae 53 432 118 13 9 1 4 4 4
family Proteidae 5 1
family Proteinivoraceae 1003 460 7 8 7
family Pseudanabaenaceae 376 3 2 4
family Pseudoalteromonadaceae 29 45 1 1 4
family Pseudococcidae 32 2 1
family Pseudomonadaceae 352 394 51 9 2 5 11 2 5 4
family Pseudonocardiaceae 342 330 1 2 4 4
family Pseudoxanthobacteraceae 5
family Psychromonadaceae 15 36 4
family Puniceicoccaceae 771 374 7 1 4 4 1
family Pyrinomonadaceae 38
family Rarobacteraceae 56
family Reichenbachiellaceae 40
family Reyranellaceae 5
family Rhabdochlamydiaceae 112
family Rhizobiaceae 327 82 8 14 1 1 1 7 4
family Rhodanobacteraceae 890 207 1 3 3 4
family Rhodobacteraceae 247 280 4 4 1 1 1 4 7 4
family Rhodobiaceae 3 7 3 4
family Rhodocyclaceae 788 364 70 1 1 1 1
family Rhodospirillaceae 1055 826 370 25 5 9 10 7 4
family Rhodothalassiaceae 10 13 1
family Rhodothermaceae 1190 136 6 2 7 1 4
family Rhodovibrionaceae 271 418 1 8
family Rickettsiaceae 675 225 1 2 6 4
family Rikenellaceae 29 1077 733 35 31 16 18 14 10 7 4
family Rivulariaceae 573 100 6 4
family Robiginitomaculaceae 41 2
family Roseiarcaceae 4
family Roseiflexaceae 1 9 1
family Roseivirgaceae 43
family Roseobacteraceae Pujalte et al. 2014 64 50 1 1 2 4
family Ruaniaceae 1
family Rubricoccaceae 9
family Rubritaleaceae 422 159 3 1
family Rubrobacteraceae 9 66 3 2 3
family Ruminococcaceae 1298 1105 788 36 27 6 18 15 11 7 4
family Saccharomycetaceae 4 5
family Saccharospirillaceae 31 427 1 1
family Salinibacteraceae 2
family Salinisphaeraceae 16 1
family Salinivirgaceae 1
family Salisaetaceae 269 111 1 4
family Sandaracinaceae 11 1
family Sanguibacteraceae 4 2 1 1
family Saprospiraceae 59 46 1
family Schleiferiaceae 18 1
family Scytonemataceae 2 4
family Sedimentisphaeraceae 1 3
family Segniliparaceae 33 2 1
family Selenomonadaceae 1275 622 99 12 5 8 11 7 4
family Shewanellaceae 799 149 2 1 5 4
family Simkaniaceae 7 1
family Sinobacteraceae 918 144 2 1 1 1
family Sneathiellaceae 10
family Solanaceae 11
family Solibacteraceae 1 1 1
family Solirubrobacteraceae 11 21
family Sphaerobacteraceae 27 1
family Sphaerochaetaceae 3 2 1 1
family Sphingobacteriaceae 1296 606 4 24 5 4 9 7 4
family Sphingomonadaceae 452 597 17 14 2 1 6 6 4
family Sphingosinicellaceae 9 1 4
family Spirillaceae 4 14
family Spirochaetaceae 301 114 1 3 1 4
family Spiroplasmataceae 369 1 6 4
family Spirosomaceae 1033 610 2 3 4 6 4
family Spirulinaceae 9
family Spongiibacteraceae 182 1 1
family Sporichthyaceae 3 8
family Sporolactobacillaceae 400 137 2 1 1
family Sporomusaceae 856 742 34 3 5 7 4
family Staphylinidae 3
family Staphylococcaceae 1011 328 207 3 3 6 5 3 6 5 4
family Stappiaceae 2 1 4
family Stellaceae 186 1
family Steroidobacteraceae 14 32
family Sterolibacteriaceae 200 63 11 1 4
family Streptococcaceae 1288 1102 774 36 31 16 16 11 11 7 4
family Streptomycetaceae 243 201 2 1 2 6 4
family Streptosporangiaceae 503 164 1 2 1
family Succinivibrionaceae 336 274 15 2 1 3
family Sulfolobaceae 5
family Sulfuricellaceae Watanabe et al. 2014 6 1 1
family Sulfurovaceae Waite et al. 2017 5 1 1
family Sutterellaceae 1275 1090 713 36 28 17 18 11 11 7 3
family Symbiobacteriaceae 781 272 3 7 3
family Synechococcaceae 378 8 1 1 4
family Synergistaceae 960 407 236 1 1 3 1 7 7 4
family Syntrophaceae 198 57 1 1 1 4
family Syntrophobacteraceae 401 403 2 2 1
family Syntrophomonadaceae 1069 477 11 3 4 5 4
family Syntrophorhabdaceae 35 1
family Syntrophotaleaceae 10
family Tannerellaceae 1283 1049 719 34 32 19 18 13 11 7 4
family Temperatibacteraceae 1
family Tepidamorphaceae 2
family Tepidanaerobacteraceae 426 11 1 2 1
family Terasakiellaceae 1
family Terrimicrobiaceae 4
family Thalassobaculaceae 61 2 2
family Thalassospiraceae 292 34 358 1 1
family Thermaceae 461 88 1 1 2 5 4
family Thermoactinomycetaceae 801 531 1 4 4 6 4
family Thermoanaerobacteraceae 1108 313 212 4 6 4 4
family Thermoanaerobacterales Family III. Incertae Sedis 1252 156 1 4 8 7 4
family Thermoanaerobacterales Family IV. Incertae Sedis 33 1
family Thermoanaerobaculaceae 77
family Thermococcaceae 3 1 1
family Thermodesulfobacteriaceae 124 23 1 2 1
family Thermodesulfobiaceae 11 61 17 5 2 2 1
family Thermodesulfovibrionaceae 223 15 6 3
family Thermoflexaceae 4
family Thermoflexibacteraceae 106
family Thermogemmatisporaceae 108 7 3
family Thermoguttaceae Dedysh et al. 2020 39 1
family Thermohalobacteraceae Spring 2020 819 4 4 8
family Thermoleophilaceae 36 1
family Thermolithobacteraceae 50
family Thermomicrobiaceae 1
family Thermomonosporaceae 361 64 1 1 3 4
family Thermonemataceae 19 4
family Thermoproteaceae 1
family Thermosediminibacteraceae 83 47 6 1
family Thermosporotrichaceae 6
family Thermosynechococcaceae 1
family Thermotogaceae 44 1 1 6 4
family Thermotomaculaceae 14 1
family Thioalkalibacteraceae 10 1
family Thioalkalispiraceae 53 1 3
family Thiobacillaceae 219 61 6 1 1
family Thiofilaceae 3
family Thiolinaceae 2
family Thioprofundaceae 6
family Thiotrichaceae 872 74 1 3 1 3 1
family Thiovulaceae Waite et al. 2017 6 12 1 3
family Thorselliaceae 53
family Tissierellaceae 78 494 1 2 1 4 5 3 4
family Treponemataceae 300 55 1 4 1 4
family Trichocoleusaceae 2
family Trichocomaceae 1
family Tropherymataceae 57 1
family Trueperaceae 14
family Tsukamurellaceae 65 3 1 4
family Turicibacteraceae Verbarg et al. 2014 884 662 474 8 14 6 11 2 8 5 4
family unclassified Actinobacteria (class) (miscellaneous) 1
family unclassified Bacillales 19 40
family unclassified Burkholderiales 200 198 18 15 3 3 4
family unclassified Clostridiales 719 783 35 29 5 1 3 8 4
family unclassified Rickettsiales 4
family Unionidae 178 1
family Vallitaleaceae Quemeneur et al. 64 3 4 9
family Veillonellaceae 1297 1098 744 32 28 14 16 6 11 7 4
family Verrucomicrobia subdivision 3 12 20 2
family Verrucomicrobiaceae 1114 195 220 3 1 2 3 1
family Vibrionaceae 86 102 3 4 4
family Vicinamibacteraceae 1
family Victivallaceae 274 283 6 2 2 5 6
family Viviparidae 90 1 1
family Waddliaceae 5 1
family Weeksellaceae 56 97 8 1 1 1 4
family Wenzhouxiangellaceae 33 1
family Woeseiaceae 1
family Xanthobacteraceae 25 20 1 6 1
family Xanthomonadaceae 1050 283 19 4 7 5 6 4
family Xenococcaceae 1
family Yersiniaceae 973 186 20 6 7 13 10 4
family Zoogloeaceae 306 140 1 1 1 2 1 3 4
family Zymomonadaceae 1 1 1
forma specialis Buchnera aphidicola (Acyrthosiphon kondoi) 1
forma specialis Buchnera aphidicola (Acyrthosiphon pisum) 2
forma specialis Buchnera aphidicola (Aphis glycines) 1
forma specialis Buchnera aphidicola (Cinara cedri) 1
forma specialis Buchnera aphidicola (Cinara confinis) 1
forma specialis Buchnera aphidicola (Cinara pseudotaxifoliae) 1
forma specialis Buchnera aphidicola (Cinara tujafilina) 1
forma specialis Buchnera aphidicola (Diuraphis noxia) 1
forma specialis Buchnera aphidicola (Myzus persicae) 4
forma specialis Buchnera aphidicola (Schizaphis graminum) 1
forma specialis Buchnera aphidicola (Schlechtendalia chinensis) 1
forma specialis Buchnera aphidicola (Tuberolachnus salignus) 1
forma specialis Buchnera aphidicola (Uroleucon ambrosiae) 1
forma specialis cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 1
forma specialis endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 1
forma specialis primary endosymbiont of Heteropsylla cubana 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans 4
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 3
genus 1
genus 1
genus 1
genus 1
genus 1
genus 'Haloanella' 2
genus 'Kouleothrix' 1
genus 'Terrahaemophilus' 1
genus Abiotrophia 78 131 9 2 2 2
genus Absiella 397 406 12 1 6 1
genus Abyssivirga 1
genus Acanthopleuribacter 57
genus Acaryochloris 3
genus Accumulibacter 3
genus Acetanaerobacterium 522 123 1 3 9
genus Acetatifactor 992 2 1 3 4
genus Acetilactobacillus 3
genus Acetitomaculum 754 138 1 3 3
genus Acetivibrio 1274 1016 32 26 2 9 9 7 4
genus Acetoanaerobium 567 4 7 1
genus Acetobacter 4 17 1 1 3
genus Acetobacterium 1273 456 2 4 7 7 4
genus Acetobacteroides 275
genus Acetohalobium 35 3 1 1
genus Acetomicrobium 12 37 1
genus Acetonema 242 2 2
genus Acholeplasma 901 699 6 1 2 6 3 4
genus Achromatium 11
genus Achromobacter 110 1 9 1 1 2 4
genus Acidaminobacter 306 304 3 6 3
genus Acidaminococcus 906 565 96 4 1 5 5 4 3 4
genus Acidianus 1
genus Acidibacter 47
genus Acidibrevibacterium 1
genus Acidicaldus 2
genus Acidicapsa 64 1
genus Acidiferrobacter 10 3
genus Acidihalobacter 1 1
genus Acidimicrobium 142 1 1
genus Acidiphilium 34 16 1 1
genus Acidipropionibacterium 17 1 1 4
genus Acidisoma 2
genus Acidisphaera 1 1
genus Aciditerrimonas 136 2
genus Acidithiobacillus 36 1 1
genus Acidobacterium 1 3
genus Acidocella 2 1
genus Acidothermus 46 1
genus Acidovorax 72 36 1 1 1 4 4
genus Acinetobacter 285 286 16 6 3 1 5 3 1 4 4
genus Acrocarpospora 4
genus Actibacter 1
genus Actimicrobium 2
genus Actinoallomurus 2
genus Actinoalloteichus 4
genus Actinobacillus 733 278 90 7 4 1 5 4
genus Actinobaculum 97 8 17 7 2 1
genus Actinocatenispora 329 91 1
genus Actinocorallia 3 4 2
genus Actinokineospora 4 3
genus Actinomadura 33 36 1 2 1
genus Actinomyces 947 866 579 10 27 5 5 10 7 4
genus Actinomycetospora 5 2
genus Actinoplanes 9 86 1 4
genus Actinopolymorpha 75 1 1
genus Actinopolyspora 250 177 4 1
genus Actinosynnema 1
genus Actinotalea 1
genus Actinotignum 20 59 29 3
genus Acutalibacter 9
genus Adhaeribacter 32
genus Adlercreutzia 949 537 5 25 6 6 1 1 6 1
genus Advenella 5 1 3
genus Aequorivita 1 9 2 1
genus Aeribacillus 27 1 1
genus Aeriscardovia 157
genus Aerococcus 25 309 16 1 2 4
genus Aeromicrobium 12 3 1 3 1
genus Aeromonas 138 7 4 1 1 4
genus Aerosphaera 48
genus Aerosticca Watanabe et al. 2020 3
genus Aestuariibacter 2
genus Aestuariispira 481 2
genus Afifella 1
genus Afipia 4 1 3
genus Agaribacter 285
genus Agarilytica 1
genus Agarivorans 21 1
genus Agathobacter 1 1
genus Agathobaculum 1036 1 8 27 4 10
genus Aggregatibacter 347 194 172 2 3 2 1 5 5 1
genus Aggregicoccus 1
genus Agreia 2
genus Agrilactobacillus 134 3
genus Agrobacterium 56 1 4
genus Agrococcus 21 2 3 1 1
genus Agromyces 205 84 1 2 1 1
genus Ahniella 1
genus Ahrensia 1
genus Akkermansia 1151 1035 811 36 28 16 18 14 10 4 4
genus Albibacterium 1
genus Albidovulum 1 1
genus Albimonas 3
genus Alcaligenes 13 2 1 3
genus Alcanivorax 149 11 1 1
genus Algibacter 1 3 1
genus Algicola 43
genus Algimonas 13 2
genus Algiphilus 41
genus Algivirga 1
genus Algorimarina 1
genus Algoriphagus 114 1 3
genus Aliarcobacter 50 3 1 1 4
genus Alicycliphilus 10 1 3 1
genus Alicyclobacillus 2 117 3 3 4 3
genus Aliicoccus 1
genus Aliidiomarina 15
genus Aliifodinibius 191
genus Aliihoeflea 1
genus Aliivibrio 1 1
genus Alishewanella 216 53 2
genus Alistipes 1076 733 33 31 14 11 14 10 7 4
genus Alkalibacillus 88 5
genus Alkalibacter 95 2 3
genus Alkalibacterium 427 5 1 1 7
genus Alkalibaculum 209 1 2
genus Alkalicoccus 34
genus Alkaliflexus 41 3
genus Alkalihalobacillus 16 23 8 1 3
genus Alkalilimnicola 1
genus Alkalimarinus 16
genus Alkaliphilus 1277 289 4 7 6 7 4
genus Alkalispirillum 1
genus Alkalispirochaeta 1
genus Alkalitalea 1
genus Alkanibacter 1
genus Alkanindiges 1 3
genus Allisonella 192 68 3 2
genus Alloactinosynnema 4
genus Allobacillus 2
genus Allobaculum 104 166 8 2 2
genus Allocatelliglobosispora 1
genus Allochromatium 71 1
genus Allofrancisella 6 1
genus Allofustis 27 2 2
genus Allohahella 146 78 2
genus Alloiococcus 4 77 1
genus Allokutzneria 1 1
genus Alloprevotella 9 409 83 2 3 1 1
genus Alloscardovia 73 157 19 2
genus Allosphingosinicella 14
genus Alsobacter 2
genus Alteracholeplasma 23 40 1 1 1
genus Altererythrobacter 18 2 1 4
genus Alteribacillus 2
genus Alteribacter 13
genus Alterileibacterium 2 6
genus Alterococcus 29 1
genus Alteromonas 23 1 4
genus Altibacter 1
genus Alysiella 4
genus Amaricoccus 43 3 2
genus Amedibacillus 830 340 11 1 1 6 2
genus Aminicella 597 1
genus Aminiphilus 120 5 5
genus Aminipila 1 1 4
genus Aminivibrio 62
genus Aminobacter 7 1 1
genus Aminobacterium 49 14 4 1
genus Aminomonas 50 4
genus Ammonifex 448 7 1
genus Ammoniphilus 49 33
genus Amoebophilus 1147 3 1 5 1
genus Amphibacillus 24 4
genus Amphritea 33 3
genus Amycolatopsis 14 4 1 1 4
genus Amylibacter 3
genus Amylolactobacillus 2
genus Anabaena 2 3
genus Anabaenopsis 1
genus Anaerobacillus 294 1 20
genus Anaerobacter 59
genus Anaerobacterium 32 47 3 1 4
genus Anaerobiospirillum 6 25 2
genus Anaerobium 302 19 1 9
genus Anaerobranca 1009 440 5 6 7
genus Anaerobutyricum 1012 1 32 27 6 12 9 4
genus Anaerocella 165
genus Anaerococcus 577 608 373 5 1 1 5 8 4
genus Anaerocolumna 879 8 4 5
genus Anaerofilum 1280 562 249 8 4 2 11 7
genus Anaerofustis 238 657 203 7 1 6
genus Anaeroglobus 556 14 6
genus Anaerolinea 91 69 4 1 2 1
genus Anaeromassilibacillus 9 6 1
genus Anaeromusa 124 17 2
genus Anaeromyxobacter 1 606 1 1 1
genus Anaerophaga 11 1
genus Anaeroplasma 126 166 48 1 1 2
genus Anaerorhabdus 21
genus Anaerosacchariphilus 1 13
genus Anaerosalibacter 223
genus Anaerosinus 20 34 2
genus Anaerosphaera 121 2
genus Anaerospora 3 172
genus Anaerosporobacter 598 550 5 1 1
genus Anaerostipes 1138 1102 780 36 32 16 12 13 11 7 4
genus Anaerotaenia 3 1
genus Anaerotignum 1008 21 6 5 3 10 4
genus Anaerotruncus 1255 899 730 29 20 10 7 11 7
genus Anaerovibrio 1155 11 9 1 3 8 1
genus Anaerovorax 43 276 13 1 3
genus Anaplasma 7 1
genus Ancylobacter 7
genus Anderseniella 1 4
genus Andreesenia 7
genus Andreprevotia 1
genus Aneurinibacillus 4 48 1 1
genus Angelakisella 21 5
genus Annandia 2
genus Annwoodia 1
genus Anoxybacillus 102 44 3 1 1 1 1 1
genus Anoxybacter 1 1 4
genus Anoxynatronum 666 3
genus Anseongella 1
genus Antarctobacter 1
genus Apibacter 1 1
genus Apilactobacillus 8 3
genus Aquabacterium 7 56 5 1 1
genus Aquamicrobium 12
genus Aquaspirillum 33
genus Aquibacter 7 1
genus Aquicella 9
genus Aquiflexum 11 1
genus Aquihabitans 16
genus Aquiluna 1
genus Aquimarina 5 21 1 4
genus Aquimonas 7 18
genus Aquincola 9
genus Aquipuribacter 5
genus Aquirhabdus 1
genus Aquisalibacillus 1
genus Aquisalimonas 67
genus Aquisphaera 2
genus Aquitalea 13 2 1 4
genus Arabia 1 1 1
genus Arachidicoccus 1 3
genus Arachnia 1 1 2 1
genus Arcanobacterium 43 30 31 1 1 2
genus Archaeoglobus 1
genus Archangium 12 1
genus Arcicella 95 2
genus Arcobacter 76 20 1 1 1 4
genus Arcobacter group 54 18 1 1 1 4
genus Arcticibacterium 1
genus Ardenticatena 16 2
genus Arenibacter 4 1 3
genus Arenimonas 5 35
genus Arhodomonas 11
genus Aridibacter 18
genus Armatimonas 1
genus Aromatoleum 1
genus Arsenicicoccus 1
genus Arsenophonus 27 29 1
genus Arthrobacter 150 4 10 1 1 2 1 4
genus Arthromitus 1 4
genus Arthronema 7 1
genus Arthrospira 16 4 1 1
genus Asaccharobacter 11 1 7
genus Asaccharospora 99 1
genus Asaia 4 1
genus Asinibacterium 10
genus Aspergillus 1 1
genus Asteroleplasma 271 73 1 3
genus Asticcacaulis 486 55 1 1 1
genus Atelocyanobacterium 1
genus Atlantibacter 1
genus Atopobacter 7
genus Atopobium 444 353 98 3 3 4 3 1
genus Atopococcus 15
genus Atopomonas 6
genus Atopostipes 71 2
genus Aurantiacibacter 9 1
genus Aurantimicrobium 1
genus Aurantimonas 12
genus Auraticoccus 3 3
genus Aureibacter 5
genus Aureicoccus 1
genus Aureimonas 12 1
genus Aureispira 1
genus Aureitalea 3
genus Auricoccus 1
genus Auritidibacter 1
genus Austwickia 1
genus Avibacterium 140 69 2 4 1
genus Azoarcus 78 4 1 1 1
genus Azohydromonas 10 2
genus Azomonas 4
genus Azonexus 21 1
genus Azorhizobium 6 2
genus Azorhizophilus 2
genus Azospira 9 3 9 1 1
genus Azospirillum 247 332 2 1 3 7 2 4
genus Azotobacter 4 1
genus Babela 2
genus Bacillus 7 6 1 1
genus Bacillus 855 470 66 27 1 2 8 8 6 4
genus Bacteria 1
genus Bacterioplanes 1 1
genus Bacteriovorax 8 31 1
genus Bacteroides 1298 1105 784 35 32 21 18 15 11 7 4
genus Baia 89
genus Balneatrix 13
genus Balneola 58 194
genus Bariatricus 1 3
genus Barnesiella 878 412 4 13 7 2 5 9 4
genus Barrientosiimonas 28
genus Bartonella 37 11 1 4
genus Basfia 4 1 1
genus Basilea 3 1
genus Bdellovibrio 14 10 1 1 1 1
genus Beduini 1 1
genus Beggiatoa 2 1 1
genus Beijerinckia 2 1
genus Belliella 19 3
genus Bellilinea 4 1
genus Belnapia 4 1
genus Bergeyella 21 5
genus Bernardetia 84 1
genus Berryella Wylensek et al. 2020 3 1 1
genus Beutenbergia 1
genus Bibersteinia 3 1 1
genus Bifidobacterium 1286 1103 812 36 31 20 18 12 11 6 4
genus Bigelowiella 2 2
genus Bilophila 1170 4 605 32 19 12 14 11 11 7
genus Biomaibacter 1
genus Biostraticola 26
genus Bisgaardia 70 1
genus Bittarella 8 6 2
genus Bizionia 2 2
genus Blastocatella 1
genus Blastochloris 5 1
genus Blastococcus 3 1 1 1
genus Blastocystis 2
genus Blastomonas 8 1
genus Blastopirellula 17
genus Blattabacterium 1 4
genus Blautia 1298 1105 789 36 31 20 18 15 11 7 4
genus Blochmannia 328 6 4
genus Bogoriella 11
genus Bombilactobacillus 104
genus Bombiscardovia 15 11
genus Bordetella 47 1 4
genus Borrelia 17 2 4
genus Borreliella 4
genus Bosea 7 1 1 4
genus Bosea 3
genus Boseongicola 2
genus Boudabousia 18
genus Bounagaea 1
genus Bowdeniella 21
genus Bowmanella 61
genus Brachybacterium 186 20 5 1 1
genus Brachymonas 3
genus Brachyspira 23 13 1 4
genus Brackiella 15
genus Bradymonas 1
genus Bradyrhizobium 31 2 10 1 1 4
genus Brassicibacter 731 4 3 5
genus Brenneria 47 394 1 3 1
genus Breoghania 1
genus Brevefilum 1
genus Brevibacillus 122 76 1 1 1 4
genus Brevibacterium 96 99 60 1 1 7 4
genus Brevifollis 18
genus Brevinema 5 1
genus Brevirhabdus 1
genus Brevundimonas 31 38 7 1 3 2 4
genus Breznakia 3
genus Breznakibacter 16 2
genus Brochothrix 765 17 1 1 1 1
genus Brockia 23
genus Brucella 12 1 4 1 2
genus Bryobacter 19
genus Buchnera 1 4
genus Bulleidia 249 55 2 2 5
genus Burkholderia 364 32 1 11 1 1 5 4
genus Buttiauxella 130 1
genus Butyribacter 1 1 1
genus Butyricicoccus 633 77 34 29 5 1 12 8
genus Butyricimonas 1001 892 455 29 12 11 15 6 9 7 4
genus Butyrivibrio 851 1075 416 28 27 10 3 9 7 4
genus Bythopirellula 6
genus Caballeronia 21 4
genus Caedibacter 3
genus Caenispirillum 24
genus Caldalkalibacillus 135 2
genus Caldanaerobacter 54 107 1 1 1
genus Caldanaerobius 37 3
genus Caldanaerovirga 5
genus Caldibacillus 1 1 3
genus Caldicellulosiruptor 1177 79 1 4 8 6 4
genus Caldicoprobacter 36 119
genus Caldilinea 420 9 7 3
genus Caldimicrobium 2 1
genus Caldimonas 24
genus Caldinitratiruptor 260 7
genus Caldisalinibacter 474 2
genus Caldisericum 5 1
genus Calditerricola 2
genus Calditerrivibrio 3 1 1
genus Caldithrix 249 10 7 1
genus Calochaete 15
genus Caloramator 1270 727 1 9 2 9 9 7
genus Caloranaerobacter 2 7
genus Caloribacterium 13
genus Calothrix 525 99 6 4
genus Camelimonas 3
genus Caminibacter 1 3 2
genus Caminicella 22 673 3
genus Campylobacter 480 404 263 7 3 2 7 6 7 4
genus Candidatus Azobacteroides 67 4
genus Candidatus Desulforudis 1
genus Candidatus Methanoregula Brauer et al. 2006 1
genus Candidatus Nitrosoglobus 1
genus Candidatus Tenderia Eddie et al. 2016 1
genus Candidatus Velamenicoccus Kizina et al. 2022 1
genus Candidatus Viadribacter Braun and Szewzyk 2016 4
genus Candidatus Walczuchella 1
genus Candidimonas 1
genus Canicola 58
genus Canis 1
genus Capnocytophaga 14 12 2 1 1 1 4
genus Caproiciproducens 1 29 1 9 4
genus Carboxydocella 722 31 4 3 2 1
genus Carboxydothermus 13 4
genus Carboxylicivirga 263 1 1
genus Cardinium 1
genus Cardiobacterium 28 119 2 1
genus Carnimonas 16
genus Carnobacterium 49 5 8 1 1 2 4
genus Carsonella 1
genus Casaltella 679 3 6
genus Castellaniella 1
genus Catabacter 149 98 1 1 8 6
genus Catellatispora 1
genus Catellicoccus 1
genus Catenibacterium 400 356 292 14 2 8 2 2
genus Catenisphaera 78 1 2
genus Catenovulum 1 1
genus Catenulispora 3 4
genus Catonella 868 1069 1 16 1 3 6 4
genus Caulobacter 9 15 1 1 4
genus Cecembia 15
genus Cedecea 95 1
genus Celeribacter 3
genus Celerinatantimonas 6
genus Cellulomonas 18 87 4 1 4
genus Cellulophaga 4 2 4
genus Cellulosibacter 112
genus Cellulosilyticum 1010 15 2 1 10 4
genus Cellulosimicrobium 2 1 1
genus Cellvibrio 7 46 1 3
genus Cenarchaeum DeLong and Preston 1996 1
genus Centipeda 6
genus Cerasicoccus 303 198 1 3 1
genus Cereibacter 1 9 1 2
genus Cesiribacter 35
genus Cetobacterium 74 51 4 2 1
genus Chamaesiphon 5 3
genus Chania 12 3
genus Chelativorans 1 9 1
genus Chelatococcus 4 1
genus Chelonobacter 35 2 1
genus Chiayiivirga 1
genus Chishuiella 5
genus Chitinilyticum 3
genus Chitinimonas 20 1
genus Chitinispirillum 13 2
genus Chitinivibrio 2
genus Chitinivorax 11
genus Chitinophaga 40 33 3 1 4
genus Chlamydia 1 2 1 1
genus Chloracidobacterium 14 3
genus Chlorobaculum 1054 6 1 1 2 4
genus Chlorobium 4 1 1
genus Chloroflexus 2 1
genus Chlorogloeopsis 10
genus Chloroherpeton 6 21
genus Chondrocystis 1
genus Chondromyces 51 1
genus Christensenella 244 179 16 26 3 2 10 7 4
genus Chromatium 270 3
genus Chromobacterium 125 10 1 1 4
genus Chromohalobacter 1 1
genus Chroococcidiopsis 1 1 1
genus Chroococcus 529 2 2
genus Chryseobacterium 101 41 2 1 1 6 4
genus Chryseolinea 30 4
genus Chryseomicrobium 20 2
genus Chthoniobacter 22 12
genus Chthonomonas 5 100 3
genus Citreitalea 1
genus Citricoccus 2 1
genus Citrifermentans 1 8 2
genus Citrobacter 233 16 55 17 7 3 4 10 3 4
genus Citromicrobium 3
genus Clavibacter 1 4
genus Cloacibacillus 111 136 106 1 2 1 1 1
genus Cloacibacterium 17 2 1 1 3
genus Cloacimonas 1
genus Clostridiisalibacter 7
genus Clostridioides 84 488 3 31 7 5 6 4
genus Clostridium 1297 1098 778 35 31 20 17 1 11 7 4
genus Cnuella 3
genus Cobetia 1
genus Cocleimonas 2
genus Coenonia 2
genus Cognaticolwellia Liu et al. 2020 1
genus Cohaesibacter 1 1
genus Cohnella 414 53 3 3 7 4
genus Coleofasciculus 1
genus Colidextribacter 1 23 9
genus Collimonas 6 32 1 4
genus Collinsella 1055 945 770 32 21 6 14 7 7 4
genus Colwellia 36 1 4
genus Comamonas 114 37 22 1 8 1 3
genus Commensalibacter 2
genus Companilactobacillus 169 134 1 1 1 4
genus Conchiformibius 4 1
genus Conexibacter 6 8
genus Confluentimicrobium 1
genus Congregibacter 5
genus Constrictibacter 2 1
genus Contubernalis 180 5
genus Coprobacillus 1268 552 154 5 25 5 3 2 7
genus Coprobacter 667 337 9 9 2 1 5
genus Coprococcus 1294 1104 2 31 31 20 17 2 11 7
genus Coprothermobacter 11 48 7
genus Coraliomargarita 368 73 1
genus Corallibacter 1
genus Corallococcus 4
genus Coriobacterium 101 22 2 1 3
genus Corticibacter 4
genus Corynebacterium 643 623 445 8 13 2 7 9 1 4
genus Couchioplanes 1 12
genus Coxiella 24 1
genus Crassaminicella 1
genus Craurococcus 2
genus Crenothrix 2
genus Criblamydia 43
genus Crinalium 1 1
genus Croceibacter 7 1
genus Croceibacterium 1
genus Croceicoccus 1
genus Cronobacter 84 83 2 1 4
genus Cruoricaptor 52 1
genus Cryobacterium 2 11 1
genus Cryomorpha 86
genus Cryptanaerobacter 1
genus Cryptobacterium 354 1 1 3 1
genus Cryptococcus 13
genus Cryptosporangium 1
genus Cryptosporidium 1
genus Cucumibacter 2
genus Culturomica 8
genus Cuneatibacter 10
genus Cupidesulfovibrio 1 13
genus Cupriavidus 10 58 1 1 1 4
genus Curtobacterium 11 1 1 1
genus Curvibacter 36 7 6 1 2
genus Cutibacterium 7 11 29 1 1 1
genus Cyanobacterium 200 31 1
genus Cyanobium 4 1 1 1
genus Cyanothece 1
genus Cyclobacterium 64 4
genus Cycloclasticus 14 22 1 1
genus Cyclonatronum 3
genus Cylindrospermum 1
genus Cystobacter 41 41 1
genus Cytobacillus 99 1 1 4
genus Cytophaga 55 2 1
genus Dactylococcopsis 3
genus Dactylosporangium 18 5
genus Dasania 23
genus Dechloromonas 113 9 1
genus Deefgea 1 6
genus Deferribacter 150 36 4 4
genus Deferrisoma 23 1
genus Defluviicoccus 9 1
genus Defluviimonas 3 1
genus Defluviitalea 221 2 3 3
genus Defluviitoga 5 1
genus Dehalobacter 1 213 3 1 4
genus Dehalobacterium 535 2 9 2 7 3 1
genus Dehalococcoides 2 57 1 1 1 1
genus Dehalogenimonas 87 160 1 4
genus Deinococcus 610 146 6 1 1 1 4 4
genus Delftia 21 7 64 3
genus Dellaglioa 94 11
genus Demequina 6 55 1
genus Dendrosporobacter 52
genus Denitratisoma 154 11 1
genus Denitrobacter 4
genus Denitrobacterium 1 6 1 1
genus Denitrovibrio 3
genus Dependoparvovirus 2
genus Dermabacter 38 60 52 1 1
genus Dermacoccus 9 1 1 1 1
genus Dermatophylus 1
genus Derxia 46
genus Desemzia 2 246
genus Desertibacter 5
genus Deserticella 6
genus Desmospora 5
genus Desulfacinum 60 2
genus Desulfallas 36 3 1
genus Desulfarculus 136 1
genus Desulfatibacillum 3 1 1
genus Desulfatiferula 19
genus Desulfatiglans 11
genus Desulfatirhabdium 1
genus Desulfatitalea 8
genus Desulfitibacter 3 100 1 2 1
genus Desulfitispora 33 2
genus Desulfitobacterium 225 104 1 1 3 4
genus Desulfobacca 1 23 1 1
genus Desulfobacter 86 14 4 2 3
genus Desulfobacterium 1 316 1 1 1
genus Desulfobacula 1 3
genus Desulfobaculum 12
genus Desulfobotulus 6
genus Desulfobulbus 7 83 1 1
genus Desulfocapsa 6 2 1
genus Desulfocarbo 134
genus Desulfocella 306 1 2 6
genus Desulfococcus 6 3 1 4
genus Desulfoconvexum 1
genus Desulfocurvibacter 1 1
genus Desulfocurvus 3
genus Desulfofaba 6 39
genus Desulfofarcimen 41 245 1 4
genus Desulfofrigus 133 49
genus Desulfofundulus 203 98 1
genus Desulfofustis 11
genus Desulfoglaeba 257
genus Desulfohalobium 3 3
genus Desulfohalophilus 1
genus Desulfohalotomaculum 128 748 1 1
genus Desulfohalovibrio 3 80
genus Desulfomicrobium 84 250 1 7 4
genus Desulfomonile 197 15 1 1
genus Desulfonatronobacter 5
genus Desulfonatronovibrio 184 8 2
genus Desulfonatronum 260 43 2
genus Desulfonauticus 73 26 7
genus Desulfonema 26 2
genus Desulfonispora 95
genus Desulfopila 1 1
genus Desulfoplanes 29
genus Desulforegula 78 2
genus Desulforhabdus 1
genus Desulforhopalus 3
genus Desulfosalsimonas 2
genus Desulfosarcina 86 20 1
genus Desulfoscipio Watanabe et al. 2020 8 1 1
genus Desulfosoma 134 2
genus Desulfosporosinus 577 211 1 1 1 4 7 4
genus Desulfotalea 5 1
genus Desulfothermus 14
genus Desulfotignum 2
genus Desulfotomaculum 689 878 2 9 4 2 8 7 4
genus Desulfovibrio 1073 950 382 20 7 11 10 6 10 7 4
genus Desulfovirga 27
genus Desulfurella 5 6 1
genus Desulfuribacillus 7 1
genus Desulfurispira 3
genus Desulfurispirillum 228 1 1
genus Desulfurispora 686 586 2 2 2
genus Desulfurivibrio 2 1
genus Desulfurobacterium 6 1
genus Desulfurococcus 1
genus Desulfuromonas 59 55 2 1
genus Desulfuromusa 606 4 1 5
genus Dethiobacter 46 8 1 2 3 1
genus Dethiosulfatibacter 316 2
genus Dethiosulfovibrio 707 102 1 2 6
genus Devosia 410 63 1 4
genus Devriesea 1
genus Dialister 853 969 475 10 11 10 14 4 9 5 4
genus Diaphorobacter 7 5 1 1
genus Dichelobacter 1 1
genus Dichotomicrobium 11
genus Dickeya 24 45 1 1 4
genus Dictyoglomus 74 2 1
genus Dielma 601 308 9 14 1 7
genus Dientamoeba 1
genus Dietzia 68 142 1 1
genus Dinoroseobacter 1
genus Diplorickettsia 13
genus Dispar 1
genus Dissulfuribacter 10
genus Dokdonella 505 41 1 1 1
genus Dokdonia 23 4
genus Dolichospermum 855 2 7 1
genus Dolosicoccus 7 1
genus Dolosigranulum 200 1
genus Dongia 177 3
genus Dorea 1283 1090 779 35 32 21 18 13 10 7
genus Draconibacterium 31 1
genus Drancourtella 3 10
genus Duganella 3 1
genus Duncaniella 1 4
genus Duodenibacillus 7 1 2
genus Dyadobacter 349 68 1 4 4
genus Dyella 1 8 1 1
genus Dysgonomonas 1040 707 10 4 7 2 7 7
genus Dysosmobacter 8 1
genus Echinicola 52 1 4
genus Ectobacillus 26 2
genus Ectothiorhodosinus 4
genus Ectothiorhodospira 212 43 1
genus Edaphobacter 150 1
genus Edwardsiella 73 29 1
genus Edwardsiella 36 1
genus Effusibacillus 188 5
genus Eggerthella 953 906 575 24 31 8 8 5 10 6 4
genus Eggerthia 392 1 1
genus Egibacter 1
genus Egicoccus 1
genus Ehrlichia 330 9 1 1 2 1
genus Eikenella 7 6 5 1 2 1
genus Eionea 1
genus Eisenbergiella 832 518 24 3 5 7 10 6
genus Eisenibacter 137
genus Ekhidna 1
genus Elioraea 3
genus Elizabethkingia 4 21 1 4
genus Elstera 3
genus Elusimicrobium 7 60 7 1 1
genus Emcibacter 139
genus Emergencia 2 1 10
genus Empedobacter 8 1
genus Emticicia 910 151 2 1 2 5
genus Endobacter 1
genus Endobugula 86
genus Endolissoclinum 1
genus Endomicrobium 1
genus Endozoicomonas 5 1
genus Enhydrobacter 29
genus Enorma 101 68 3 2 1 1
genus Ensifer 3 1 1
genus Enterobacter 548 61 208 9 6 5 15 6 7 4
genus Enterocloster 986 2 33 28 5 4 10 4
genus Enterococcus 1039 190 138 27 27 6 9 5 5 4 4
genus Enterorhabdus 333 263 7 12 7 1
genus Enteroscipio 2
genus Enterovibrio 1
genus Entomomonas 1
genus Entomoplasma 8 20 2 4
genus Epibacterium 1
genus Epilithonimonas 5 3 1
genus Epulopiscium 59 3 1
genus Ercella 282
genus Ereboglobus 3
genus Eremococcus 26 21 1
genus Eremococcus 1 11
genus Erwinia 319 181 1 1 2 11 1 2 4
genus Erysipelatoclostridium 1099 756 35 28 6 9 10 7 4
genus Erysipelothrix 1076 664 3 9 5 7 3
genus Erythrobacter 91 14 1 1 1
genus Erythromicrobium 11
genus Escherichia 1050 63 1 11 24 7 1 6 1 6 4
genus Ethanoligenens 626 886 4 10 4
genus Eubacterium 1228 1105 151 36 32 12 13 12 10 7 4
genus Eudoraea 51
genus Euryhalocaulis 8
genus Euzebya 717 42 1 1 1
genus Euzebyella 1
genus Evansella 1
genus Evtepia 9 3
genus Exiguobacterium 20 34 1 3 4
genus Exophiala 1
genus Extensimonas 1
genus Extibacter 7
genus Ezakiella 289 3 3 1
genus Fabibacter 6
genus Facklamia 123 820 50 2 1 6
genus Faecalibacterium 1298 1104 772 35 32 18 18 4 1 7 4
genus Faecalibaculum 1 1
genus Faecalicatena 651 21 2
genus Faecalicoccus 664 3 1 3 5
genus Faecalimonas 1
genus Faecalitalea 129 128 18 18 5 4
genus Falcatimonas 1 14 1
genus Falsiporphyromonas 268 2
genus Falsirhodobacter 1
genus Fangia 12
genus Fannyhessea 154 2
genus Fastidiosipila 93 74 1 1 3
genus Fenollaria 547 4 2 6
genus Fermentimonas 1 4
genus Ferrimicrobium 13 2 1
genus Ferrimonas 12 40 1
genus Ferrithrix 172
genus Ferrovibrio 2
genus Ferrovum 2
genus Ferruginibacter 59
genus Fervidicella 8 1
genus Fervidobacterium 13 1 4
genus Fibrella 1 3
genus Fibrobacter 102 235 85 2 1
genus Fictibacillus 34 1 4
genus Filifactor 382 364 18 1 1 3
genus Filimonas 4
genus Filomicrobium 2
genus Fimbriimonas 2 25 1
genus Finegoldia 653 787 443 5 3 2 4 8 1 3
genus Fischerella 1
genus Flagellimonas 1 1
genus Flammeovirga 287 28 1 1 4
genus Flaviaesturariibacter 1
genus Flavicella 4
genus Flaviflexus 21 1 3
genus Flavihumibacter 3
genus Flavilitoribacter 7
genus Flavisolibacter 28 1 1 1 1 4
genus Flavitalea 9
genus Flavivirga 1
genus Flavobacterium 49 39 394 5 7 4
genus Flavonifractor 1072 768 31 31 10 1 10 7 4
genus Flectobacillus 82
genus Flexibacter 8 1 2
genus Flexispira Bryner 1987 3
genus Flexistipes 61 1
genus Flexithrix 11
genus Flintibacter 25 1 2 9
genus Fluoribacter 1
genus Fluviicola 17 3 1 1
genus Fluviimonas 413 1
genus Fluviispira 3
genus Fodinibius 5 2
genus Fodinicurvata 428 1 8
genus Fontibacillus 2
genus Fontibacter 32
genus Fonticella 132 2
genus Formosa 2 4
genus Fournierella 1 16 4 1
genus Francisella 53 60 2 2 1 4
genus Franconibacter 10
genus Frankia 2 1 4
genus Frateuria 3 1
genus Frederiksenia 2 1
genus Fretibacter 14
genus Fretibacterium 4 98 1
genus Friedmanniella 20 26 1 1
genus Frigoribacterium 1
genus Frischella 2 1 3
genus Frisingicoccus 8
genus Frondihabitans 1
genus Fructilactobacillus 54 77 1 1 1
genus Fructobacillus 62 31
genus Fuchsiella 10 1
genus Fucophilus 2
genus Fulvibacter 1
genus Fulvimarina 1
genus Fulvitalea 60
genus Fulvivirga 6 88
genus Furfurilactobacillus 527 34 1 1
genus Fuscovulum Suresh et al. 2019 1 3
genus Fusibacter 84 199 3 6 6
genus Fusicatenibacter 1088 760 17 4 1 11
genus Fusobacterium 572 519 121 5 4 1 2 4 6 4
genus Gabonia Mourembou et al. 2015 1
genus Gabonibacter 10 1 2
genus Gaetbulibacter 1
genus Gaiella 40 2
genus Galenea 40 2
genus Gallaecimonas 4
genus Gallibacterium 23 67 1 1 1 1
genus Gallicola 68 70 1
genus Gallionella 158 23 2 1
genus Garciella 12 2
genus Gardnerella 71 145 40 1 1 2 1
genus Garicola 2
genus Garritya 2
genus Gelria 2 211 2
genus Gemella 1183 615 153 3 16 5 6 6 4
genus Geminicoccus 53 2
genus Geminisphaera 9
genus Geminocystis 1
genus Gemmata 7 12 1 1
genus Gemmatimonas 8 21 1
genus Gemmatirosa 8 1
genus Gemmiger 994 16 9 7 9
genus Gemmobacter 2 1 4
genus Geoalkalibacter 11 1
genus Geobacillus 416 55 7 11 1 1 1 3 1
genus Geobacter 78 49 5 1 4
genus Geodermatophilus 5 7 1 2
genus Geofilum 116
genus Geomicrobium 21
genus Geopsychrobacter 6
genus Georgenia 9 34
genus Georhizobium 1
genus Geosporobacter 2 4
genus Geothermobacter 2
genus Geothermomicrobium 2
genus Geothrix 599 410 2 3
genus Geotoga 1
genus Geovibrio 13 1 3
genus Gibbsiella 4
genus Giesbergeria 11 1
genus Gilliamella 1
genus Gillisia 788 27 1 1
genus Gilvimarinus 1
genus Gimesia 2
genus Glaciecola 178 64 3
genus Glaciimonas 2
genus Glaesserella 4 1 1
genus Gleimia 35 37 1
genus Globicatella 19 2 1
genus Gloeobacter 9 1 1 1
genus Gloeothece 1
genus Gloeotrichia 3
genus Glomeribacter 549 2 3
genus Gluconacetobacter 5 7 1
genus Gluconobacter 92 3 1 1
genus Glutamicibacter 101 58 1
genus Glycocaulis 1 1
genus Glycomyces 60 12 1
genus Gorbachella 1 1 1
genus Gordonia 44 66 1 1 4
genus Gordonibacter 620 457 24 23 2 1 7 1
genus Gottschalkia 152 4 3 4
genus Gracilibacillus 137 1
genus Gracilibacter 464 3 2 3 6
genus Gracilimonas 299 2 3
genus Gramella 53 2 1 6 4
genus Granulibacter 4
genus Granulicatella 603 151 320 13 2 3 5 5
genus Granulicella 83 16 1
genus Granulosicoccus 76 1
genus Gryllotalpicola 7 1
genus Gudongella 1 1
genus Guggenheimella 380 2 6
genus Gulbenkiania 5
genus Gullanella 2
genus Gulosibacter 48 5 29 1
genus Guyparkeria 10 1
genus Gynuella 39 1
genus Haematobacter 3
genus Haematospirillum 2
genus Haemophilus 971 822 528 21 16 5 17 5 5 6 4
genus Hafnia 14 2 4 1
genus Hahella 149 192 1 3
genus Halanaerobacter 8 4 4
genus Halanaerobaculum 6
genus Halanaerobium 256 11 1 1 2 4
genus Halarcobacter 9 1 2
genus Halarsenatibacter 69
genus Haliangium 111 23 3
genus Haliea 7
genus Halioglobus 1 1
genus Haliscomenobacter 73 3
genus Halobacillus 25 1 4
genus Halobacteriovorax 7 34 1 4
genus Halobacteroides 8 1
genus Halobaculum 2
genus Halocella 9 1 4
genus Halochromatium 72 192 2
genus Halodesulfovibrio 5
genus Haloechinothrix 3
genus Haloferax 1
genus Haloferula 34 2
genus Haloglycomyces 1
genus Halolactibacillus 10
genus Halomicroarcula 1
genus Halomicronema 1 3
genus Halomonas 127 432 1 1 3 1 3 4
genus Halonatronum 5
genus Haloplasma 34 1 2
genus Halopolyspora 144 2
genus Halopseudomonas 7
genus Halorhodospira 27 82 1 2 1
genus Halospina 8
genus Halospirulina 1
genus Halotalea 1
genus Halothermothrix 156 2 5 1
genus Halothiobacillus 16 47 2
genus Haploplasma 55 22 1 2 2 3
genus Harryflintia 4 1
genus Hartmannibacter 1
genus Hathewaya 1269 563 4 3 7
genus Hazenella 17
genus Helcococcus 85 159 19
genus Helicobacter 362 32 3 1 1 1 4
genus Heliimonas 6
genus Heliobacterium 1 12 1 3 3 1
genus Heliomicrobium 1 1 1
genus Heliomonas 1 1
genus Heliophilum 10 2
genus Heliorestis 463 10 3 5
genus Heliothrix 1
genus Hellea 9
genus Henriciella 431 4
genus Hepatoplasma 1
genus Hephaestia 2
genus Herbaspirillum 504 56 250 13 2 3 3 4
genus Herbinix 380 6 2 6 4
genus Herminiimonas 42 182 2 4
genus Herpetosiphon 1 5
genus Hespellia 1065 499 15 1 10
genus Heyndrickxia 1 2
genus Hippea 3 1
genus Hirschia 1
genus Histophilus 19 1 1
genus Hoeflea 1
genus Holdemanella 665 600 2 17 2 5 6
genus Holdemania 1100 936 565 23 25 5 9 11 7
genus Holophaga 10 2
genus Holospora 1
genus Holzapfelia 52
genus Homo 1
genus Hoppeia 1
genus Howardella 773 123 2 2 2
genus Hoyosella 35
genus Hugenholtzia 35 2
genus Humibacter 19
genus Hungateiclostridium 590 561 2 4 1 7 6 4
genus Hungatella 1040 32 30 5 5 10 7
genus Hwangdonia 12
genus Hydrocarboniphaga 910 2 1
genus Hydrocoleum 13 1
genus Hydrogenibacillus 83 4 2 4
genus Hydrogenispora 498
genus Hydrogenoanaerobacterium 882 224 2
genus Hydrogenobacter 4 1 3
genus Hydrogenobaculum 8 1 2 4 1
genus Hydrogenophaga 39 12 1 1 1 1
genus Hydrogenophilus 569 213 3 1 1
genus Hydrogenothermus 21
genus Hydrogenovibrio 25 21 1
genus Hydrotalea 16
genus Hylemonella 1
genus Hymenobacter 778 40 1 1 4
genus Hyphomicrobium 140 18 1 4 4
genus Hyphomonas 65 11 3 2
genus Iamia 5
genus Ianmoorea 3
genus Ichthyobacterium 1
genus Ideonella 2
genus Idiomarina 48 11 1 1
genus Ignatzschineria 1 6
genus Ignavibacterium 36 41 1
genus Ignavigranum 87 2
genus Ihubacter 28 9
genus Ileibacterium 3
genus Ilumatobacter 81
genus Ilyobacter 4
genus Immundisolibacter 3
genus Imperialibacter 16
genus Imtechella 1 1
genus Indibacter 22
genus Indioceanicola 3
genus Inquilinus 6 14
genus Insolitispirillum 754 216 7
genus Intestinibacillus 8 8
genus Intestinibacter 884 770 19 22 3 9
genus Intestinibaculum Kim et al. 2019 1 4
genus Intestinimonas 1046 721 34 27 6 1 10 4
genus Intrasporangium 2
genus Iodobacter 7 3
genus Ishikawaella 1
genus Isochromatium 6
genus Izimaplasma 1
genus Jahnia Reichenbach 2005 1
genus Janibacter 2 1
genus Jannaschia 2 1 1
genus Janthinobacterium 40 6 3 4
genus Jatrophihabitans 6 1
genus Jeotgalibaca 1 3
genus Jeotgalibacillus 7 1 1
genus Jeotgalicoccus 13 67 1 1
genus Jiangella 16 2 1 4
genus Jinshanibacter 3
genus Johnsonella 1248 746 10 12 1 2 7
genus Jonesia 24 100
genus Jonquetella 103 10 1
genus Kaistella 1 3
genus Kaistia 10 36 1
genus Kallipyga 66 1 1
genus Kallotenue 15
genus Kandleria 165 2
genus Kangiella 34 1
genus Kastovskya 2
genus Keratinibaculum 10
genus Ketobacter 1
genus Ketogulonicigenium 3 1
genus Kiloniella 50 3 2
genus Kineococcus 4 6 1
genus Kineosporia 6 1
genus Kinetoplastibacterium 4
genus Kingella 6 4 2 1
genus Kistimonas 1
genus Kitasatospora 36 9 1 5 4
genus Klebsiella 381 77 144 7 13 1 12 12 10 5 4
genus Kluyvera 14 537 4 1 7
genus Knoellia 1
genus Kocuria 39 27 6 1 1 1 4
genus Kofleria 2
genus Komagataeibacter 31 1 3
genus Kordia 1 1
genus Kordiimonas 2
genus Koribacter 4 1
genus Kosakonia 39 270 4 3
genus Kosmotoga 10 1 1
genus Kozakia 1 3
genus Kribbella 67 301 5
genus Kroppenstedtia 3 1 2
genus Ktedonobacter 1
genus Kurthia 1 3
genus Kushneria 283 3 2 1
genus Kutzneria 1
genus Kyrpidia 114 1
genus Kytococcus 1 2 1
genus Labilibacter 4
genus Labilibaculum 1 4
genus Labilithrix 36
genus Labrenzia 1 1
genus Labrys 5 6
genus Laceyella 30 5 1
genus Lachnoanaerobaculum 1074 12 5 2 7 4
genus Lachnobacterium 1185 756 12 28 1 6 8 9 4
genus Lachnoclostridium 1102 2 36 30 7 11 10 3 4
genus Lachnospira 1298 1097 713 35 32 15 18 9 11 7 4
genus Lachnotalea 3 5
genus Lacibacter 2 3
genus Lacibacterium 130
genus Lacihabitans 7
genus Lacimicrobium 1
genus Lacinutrix 1 4
genus Lacrimispora 348 1 32 17 2 2 4
genus Lacticaseibacillus 265 64 141 3 8 2 4 1 3 4
genus Lactiplantibacillus 163 12 65 11 1 4 1 4 2
genus Lactivibrio 2
genus Lactobacillus 1206 1103 813 36 28 12 18 12 11 7 4
genus Lactococcus 866 698 260 9 10 6 7 1 8 3 4
genus Lactonifactor 721 477 27 1 4 10 7
genus Lactovum 248
genus Lacunisphaera 3
genus Lagierella 1
genus Lamprocystis 2
genus Lancefieldella 81 85 4 2 1 2 1 1
genus Lapidilactobacillus 4
genus Laribacter 3 3
genus Larkinella 1
genus Larsenimonas 1
genus Lascolabacillus 1
genus Latilactobacillus 10 33 4 1 1 3
genus Lautropia 87 46 8 1 1
genus Lawsonella 1
genus Lawsonia 6 597 1 1 3
genus Lawsonibacter 8 1
genus Leadbetterella 14 3
genus Lebetimonas 22
genus Leclercia 1 1
genus Legionella 833 67 1 1 4 3 4
genus Leifsonia 1 1 1 1
genus Leisingera 1
genus Lelliottia 396 2 2 4
genus Leminorella 4 1
genus Lentibacillus 201 56 1
genus Lentilactobacillus 69 3 14 2 1 1 2
genus Lentisphaera 4
genus Lentzea 2 1 1
genus Leptofauchea 10
genus Leptolinea 100 2
genus Leptolyngbya 292 1 1 1 2 4
genus Leptonema 17 2
genus Leptospira 347 28 2 4
genus Leptospirillum 17 1
genus Leptothrix 194 7 2 1
genus Leptotrichia 58 63 29 2 4
genus Leucobacter 18 41 1 1
genus Leuconostoc 583 768 78 3 7 2 2 10 6 4
genus Leucothrix 14 5 1
genus Levilactobacillus 76 39 5 1 1 1
genus Levilinea 1
genus Levyella 397 2
genus Lewinella 58 8
genus Libanicoccus 1
genus Liberibacter 62 2 6 7 1
genus Lichenihabitans 1
genus Ligilactobacillus 167 145 65 6 1 2 1 4
genus Limibacillus 18
genus Limibacter 1
genus Limimaricola 2
genus Limimonas 5
genus Limisphaera 20 2
genus Limnobacter 931 31 1 1 2 1
genus Limnobaculum 1
genus Limnochorda 1 1
genus Limnohabitans 17 3 2
genus Limnoraphis 3
genus Limnospira 2
genus Limosa 1
genus Limosilactobacillus 203 304 75 2 6 2 2 1 1 4
genus Liquorilactobacillus 169 1
genus Lishizhenia 2
genus Listeria 295 238 1 1 1 4 2 4
genus Litoribacillus 63
genus Litoribacter 21
genus Litoribrevibacter 11
genus Litoricola 79 38 3
genus Litorilinea 10 2 2
genus Litorilituus 83 1 4
genus Loigolactobacillus 11 1 1
genus Loktanella 2 6
genus Longibaculum 4 1 3
genus Longicatena 2 4
genus Longilinea 7 3
genus Longimonas 54
genus Lonsdalea 8
genus Luminiphilus 51
genus Lunatimonas 2
genus Luteibacter 732 42 3 1
genus Luteibaculum 1
genus Luteimonas 19 19 1 1
genus Luteipulveratus 1
genus Luteitalea 1
genus Luteivirga 5
genus Luteococcus 11 1
genus Luteolibacter 553 30 2
genus Lutibacter 39 4
genus Lutibacterium 7
genus Lutibaculum 1
genus Lutispora 289 1 3 5
genus Lysinibacillus 168 17 5 1 5 2 1 4
genus Lysinimonas 1
genus Lysobacter 248 64 1 1 2 3 4
genus Macellibacteroides 4
genus Macrococcus 489 9 2 1 3 3
genus Mageeibacillus 1 6 1
genus Magnetococcus 18 1 1
genus Magnetospira 22 1
genus Magnetospirillum 9 15 1 1
genus Magnetovibrio 3 1
genus Mahella 33 1
genus Mailhella 3 1
genus Malaciobacter 29 1 4
genus Malacoplasma 86 1
genus Maledivibacter 49 1
genus Mammaliicoccus 4 26 1 1 1
genus Mangrovibacter 6
genus Mangroviflexus 1
genus Mannheimia 541 89 8 2 1 6 1
genus Maribacter 2 1 1 4
genus Maricaulis 6 18
genus Marichromatium 182 30 1
genus Maridesulfovibrio 47 13 1 1 3
genus Marinicauda 2