Detail Microbiome Uploads

Labs that are supported with discount codes

Select the lab report on your microbiome below that you wish to upload

At present the best bang(most bacteria taxa) for the money is Biome Sight with "MICRO" as discount code , followed by Thryve Alive See Upload Statistics

Transfering Data Video

About data processing

How to transfer data from labs not currently supported

Step by step custome upload

First Class Uploads (Uploads contain Taxon Numbers)

• BiomeSight direct transfer is implemented from their site. Click to read (and discount code)
• American Gut - Appears to be working
• Atlas Biomed - See Qualifications
• Thryve
• Ubiome Json
• Ubiome Csv
• CosmosId / NirvanaBiome CSV/TSV files
• CosmosId / NirvanaBiome PDF files
• FASTQ Files
  • Strongly recommended, upload the FASTQ file to BiomeSight. This is a free UK site that will process FASTQ files and provide additional features (similar to what uBiome had).
    See this post on how to transfer back to this site.
  • Thryve Inside provides processing of uBiome FASTQ files also (which produces a CSV file that may be uploaded here)
  • Alternative: proces.
    • through SequentiaBiotech web site; and then upload the results here .
    • For a walkthru see this video on the process
    • Sorry, this site is not provisioned to process FASTQ. This import should work for any FASTQ data set processed thru the above site.
• XenoGene (ES) Detail PDF Report

Second Class Source (Name matching)

The uploaders below will NOT be updated if the format is changed by the provider unless their loads contains taxon numbers. See this post.

• Medivere - Germany
• Microba - Australia
• Category (Specialized from Academic sources)
• AtlasBio (UK) - Will Not Do, see (Comments on uploading this test)

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Legacy

• Smart Gut -- how to convert to traditional ubiome download.
• Ubiome Json
• Ubiome Csv

If your report is missing, please email a copy to Ken{at}Lassesen.com and it will be added to this page

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